BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2526 (253 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HRU7|B2HRU7_MYCMM Tax_Id=216594 RecName: Full=Pseudouridine... 494 e-138 tr|A0PSX4|A0PSX4_MYCUA Tax_Id=362242 RecName: Full=Pseudouridine... 494 e-138 sp|P65843|Y1738_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ... 430 e-119 sp|P65842|Y1711_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 430 e-119 tr|C6DRW1|C6DRW1_MYCTK Tax_Id=478434 RecName: Full=Pseudouridine... 430 e-119 tr|C1ANY4|C1ANY4_MYCBT Tax_Id=561275 RecName: Full=Pseudouridine... 430 e-119 tr|A5U370|A5U370_MYCTA Tax_Id=419947 RecName: Full=Pseudouridine... 430 e-119 tr|A1KJC8|A1KJC8_MYCBP Tax_Id=410289 RecName: Full=Pseudouridine... 430 e-119 tr|A5WN30|A5WN30_MYCTF Tax_Id=336982 RecName: Full=Pseudouridine... 430 e-119 tr|A4KHM4|A4KHM4_MYCTU Tax_Id=395095 RecName: Full=Pseudouridine... 430 e-119 tr|A2VIJ5|A2VIJ5_MYCTU Tax_Id=348776 RecName: Full=Pseudouridine... 430 e-119 tr|A0QH61|A0QH61_MYCA1 Tax_Id=243243 RecName: Full=Pseudouridine... 424 e-117 tr|Q740D8|Q740D8_MYCPA Tax_Id=1770 RecName: Full=Pseudouridine s... 422 e-116 tr|Q1B7U8|Q1B7U8_MYCSS Tax_Id=164756 RecName: Full=Pseudouridine... 410 e-113 tr|A3Q0P6|A3Q0P6_MYCSJ Tax_Id=164757 RecName: Full=Pseudouridine... 410 e-113 tr|A1UH59|A1UH59_MYCSK Tax_Id=189918 RecName: Full=Pseudouridine... 410 e-113 tr|A0QYQ1|A0QYQ1_MYCS2 Tax_Id=246196 (rluB)RecName: Full=Pseudou... 409 e-112 sp|O05668|Y1370_MYCLE Tax_Id=1769 RecName: Full=Uncharacterized ... 407 e-112 tr|B8ZRI1|B8ZRI1_MYCLB Tax_Id=561304 RecName: Full=Pseudouridine... 407 e-112 tr|A1TA74|A1TA74_MYCVP Tax_Id=350058 RecName: Full=Pseudouridine... 397 e-109 tr|A4T9Z6|A4T9Z6_MYCGI Tax_Id=350054 RecName: Full=Pseudouridine... 396 e-108 tr|B1MB30|B1MB30_MYCA9 Tax_Id=561007 RecName: Full=Pseudouridine... 351 5e-95 tr|C2AQV1|C2AQV1_TSUPA Tax_Id=521096 RecName: Full=Pseudouridine... 351 5e-95 tr|D0L940|D0L940_GORB4 Tax_Id=526226 SubName: Full=Pseudouridine... 350 1e-94 tr|C1ASX4|C1ASX4_RHOOB Tax_Id=632772 RecName: Full=Pseudouridine... 333 8e-90 tr|Q0SI80|Q0SI80_RHOSR Tax_Id=101510 RecName: Full=Pseudouridine... 331 5e-89 tr|C1A029|C1A029_RHOE4 Tax_Id=234621 RecName: Full=Pseudouridine... 326 1e-87 tr|C6WA55|C6WA55_ACTMD Tax_Id=446462 RecName: Full=Pseudouridine... 326 1e-87 tr|C3JWQ3|C3JWQ3_RHOER Tax_Id=596309 RecName: Full=Pseudouridine... 326 1e-87 tr|C7MZG0|C7MZG0_SACVD Tax_Id=471857 RecName: Full=Pseudouridine... 311 3e-83 tr|B8HGG0|B8HGG0_ARTCA Tax_Id=452863 RecName: Full=Pseudouridine... 310 1e-82 tr|Q5YY84|Q5YY84_NOCFA Tax_Id=37329 RecName: Full=Pseudouridine ... 305 2e-81 tr|A1R5C3|A1R5C3_ARTAT Tax_Id=290340 RecName: Full=Pseudouridine... 305 2e-81 tr|Q8FTK7|Q8FTK7_COREF Tax_Id=152794 RecName: Full=Pseudouridine... 305 4e-81 tr|C8NNL7|C8NNL7_COREF Tax_Id=196164 SubName: Full=RNA pseudouri... 305 4e-81 tr|Q4JVW6|Q4JVW6_CORJK Tax_Id=306537 RecName: Full=Pseudouridine... 301 3e-80 tr|A4FKA2|A4FKA2_SACEN Tax_Id=405948 RecName: Full=Pseudouridine... 301 3e-80 tr|C8RSZ6|C8RSZ6_CORJE Tax_Id=525262 (rluB)SubName: Full=RNA pse... 301 3e-80 tr|Q6NHE3|Q6NHE3_CORDI Tax_Id=1717 RecName: Full=Pseudouridine s... 299 2e-79 tr|A0JV58|A0JV58_ARTS2 Tax_Id=290399 RecName: Full=Pseudouridine... 298 4e-79 tr|C0VWF7|C0VWF7_9CORY Tax_Id=548477 RecName: Full=Pseudouridine... 297 7e-79 tr|B1VH07|B1VH07_CORU7 Tax_Id=504474 RecName: Full=Pseudouridine... 296 1e-78 tr|C5C6J9|C5C6J9_BEUC1 Tax_Id=471853 RecName: Full=Pseudouridine... 296 2e-78 tr|Q8NQK8|Q8NQK8_CORGL Tax_Id=1718 RecName: Full=Pseudouridine s... 295 3e-78 tr|Q6M5E9|Q6M5E9_CORGL Tax_Id=1718 RecName: Full=Pseudouridine s... 295 3e-78 tr|C3PGG1|C3PGG1_CORA7 Tax_Id=548476 RecName: Full=Pseudouridine... 293 1e-77 tr|A4QE19|A4QE19_CORGB Tax_Id=340322 RecName: Full=Pseudouridine... 293 1e-77 tr|C4LIG2|C4LIG2_CORK4 Tax_Id=645127 RecName: Full=Pseudouridine... 291 4e-77 tr|C5VBT2|C5VBT2_9CORY Tax_Id=553207 (rluB)RecName: Full=Pseudou... 291 5e-77 tr|C0E3H3|C0E3H3_9CORY Tax_Id=566549 RecName: Full=Pseudouridine... 289 2e-76 >tr|B2HRU7|B2HRU7_MYCMM Tax_Id=216594 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium marinum] Length = 253 Score = 494 bits (1272), Expect = e-138 Identities = 253/253 (100%), Positives = 253/253 (100%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI Sbjct: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD Sbjct: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF Sbjct: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR Sbjct: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 Query: 241 RDEIGQLYKAVGL 253 RDEIGQLYKAVGL Sbjct: 241 RDEIGQLYKAVGL 253 >tr|A0PSX4|A0PSX4_MYCUA Tax_Id=362242 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium ulcerans] Length = 253 Score = 494 bits (1272), Expect = e-138 Identities = 253/253 (100%), Positives = 253/253 (100%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI Sbjct: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD Sbjct: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF Sbjct: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR Sbjct: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 Query: 241 RDEIGQLYKAVGL 253 RDEIGQLYKAVGL Sbjct: 241 RDEIGQLYKAVGL 253 >sp|P65843|Y1738_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized RNA pseudouridine synthase Mb1738; EC=5.4.99.-; AltName: Full=RNA-uridine isomerase; AltName: Full=RNA pseudouridylate synthase;[Mycobacterium bovis] Length = 254 Score = 430 bits (1106), Expect = e-119 Identities = 215/253 (84%), Positives = 233/253 (92%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 M + E+ + RGIRLQKVLSQAGIASRRAAEK+I+DGRVEVDG VVTELGTRVDP +++ Sbjct: 2 MAEPEESREPRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVV 61 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG RV+LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRG K LFHVGRLDAD Sbjct: 62 RVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDAD 121 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPSHEVPKTYLATV G+VPRGLG+ LRAGIEL+DGP VD F Sbjct: 122 TEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDF 181 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRR+LAA GFPV+ALVR DIG VSLG+QRPGSVRALR Sbjct: 182 AVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVRALR 241 Query: 241 RDEIGQLYKAVGL 253 +EIGQLY+AVGL Sbjct: 242 SNEIGQLYQAVGL 254 >sp|P65842|Y1711_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized RNA pseudouridine synthase Rv1711/MT1751.1; EC=5.4.99.-; AltName: Full=RNA-uridine isomerase; AltName: Full=RNA pseudouridylate synthase;[Mycobacterium tuberculosis] Length = 254 Score = 430 bits (1106), Expect = e-119 Identities = 215/253 (84%), Positives = 233/253 (92%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 M + E+ + RGIRLQKVLSQAGIASRRAAEK+I+DGRVEVDG VVTELGTRVDP +++ Sbjct: 2 MAEPEESREPRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVV 61 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG RV+LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRG K LFHVGRLDAD Sbjct: 62 RVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDAD 121 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPSHEVPKTYLATV G+VPRGLG+ LRAGIEL+DGP VD F Sbjct: 122 TEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDF 181 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRR+LAA GFPV+ALVR DIG VSLG+QRPGSVRALR Sbjct: 182 AVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVRALR 241 Query: 241 RDEIGQLYKAVGL 253 +EIGQLY+AVGL Sbjct: 242 SNEIGQLYQAVGL 254 >tr|C6DRW1|C6DRW1_MYCTK Tax_Id=478434 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis] Length = 254 Score = 430 bits (1106), Expect = e-119 Identities = 215/253 (84%), Positives = 233/253 (92%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 M + E+ + RGIRLQKVLSQAGIASRRAAEK+I+DGRVEVDG VVTELGTRVDP +++ Sbjct: 2 MAEPEESREPRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVV 61 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG RV+LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRG K LFHVGRLDAD Sbjct: 62 RVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDAD 121 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPSHEVPKTYLATV G+VPRGLG+ LRAGIEL+DGP VD F Sbjct: 122 TEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDF 181 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRR+LAA GFPV+ALVR DIG VSLG+QRPGSVRALR Sbjct: 182 AVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVRALR 241 Query: 241 RDEIGQLYKAVGL 253 +EIGQLY+AVGL Sbjct: 242 SNEIGQLYQAVGL 254 >tr|C1ANY4|C1ANY4_MYCBT Tax_Id=561275 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium bovis] Length = 254 Score = 430 bits (1106), Expect = e-119 Identities = 215/253 (84%), Positives = 233/253 (92%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 M + E+ + RGIRLQKVLSQAGIASRRAAEK+I+DGRVEVDG VVTELGTRVDP +++ Sbjct: 2 MAEPEESREPRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVV 61 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG RV+LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRG K LFHVGRLDAD Sbjct: 62 RVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDAD 121 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPSHEVPKTYLATV G+VPRGLG+ LRAGIEL+DGP VD F Sbjct: 122 TEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDF 181 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRR+LAA GFPV+ALVR DIG VSLG+QRPGSVRALR Sbjct: 182 AVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVRALR 241 Query: 241 RDEIGQLYKAVGL 253 +EIGQLY+AVGL Sbjct: 242 SNEIGQLYQAVGL 254 >tr|A5U370|A5U370_MYCTA Tax_Id=419947 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis] Length = 254 Score = 430 bits (1106), Expect = e-119 Identities = 215/253 (84%), Positives = 233/253 (92%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 M + E+ + RGIRLQKVLSQAGIASRRAAEK+I+DGRVEVDG VVTELGTRVDP +++ Sbjct: 2 MAEPEESREPRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVV 61 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG RV+LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRG K LFHVGRLDAD Sbjct: 62 RVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDAD 121 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPSHEVPKTYLATV G+VPRGLG+ LRAGIEL+DGP VD F Sbjct: 122 TEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDF 181 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRR+LAA GFPV+ALVR DIG VSLG+QRPGSVRALR Sbjct: 182 AVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVRALR 241 Query: 241 RDEIGQLYKAVGL 253 +EIGQLY+AVGL Sbjct: 242 SNEIGQLYQAVGL 254 >tr|A1KJC8|A1KJC8_MYCBP Tax_Id=410289 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium bovis] Length = 254 Score = 430 bits (1106), Expect = e-119 Identities = 215/253 (84%), Positives = 233/253 (92%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 M + E+ + RGIRLQKVLSQAGIASRRAAEK+I+DGRVEVDG VVTELGTRVDP +++ Sbjct: 2 MAEPEESREPRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVV 61 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG RV+LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRG K LFHVGRLDAD Sbjct: 62 RVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDAD 121 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPSHEVPKTYLATV G+VPRGLG+ LRAGIEL+DGP VD F Sbjct: 122 TEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDF 181 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRR+LAA GFPV+ALVR DIG VSLG+QRPGSVRALR Sbjct: 182 AVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVRALR 241 Query: 241 RDEIGQLYKAVGL 253 +EIGQLY+AVGL Sbjct: 242 SNEIGQLYQAVGL 254 >tr|A5WN30|A5WN30_MYCTF Tax_Id=336982 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis] Length = 254 Score = 430 bits (1106), Expect = e-119 Identities = 215/253 (84%), Positives = 233/253 (92%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 M + E+ + RGIRLQKVLSQAGIASRRAAEK+I+DGRVEVDG VVTELGTRVDP +++ Sbjct: 2 MAEPEESREPRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVV 61 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG RV+LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRG K LFHVGRLDAD Sbjct: 62 RVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDAD 121 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPSHEVPKTYLATV G+VPRGLG+ LRAGIEL+DGP VD F Sbjct: 122 TEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDF 181 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRR+LAA GFPV+ALVR DIG VSLG+QRPGSVRALR Sbjct: 182 AVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVRALR 241 Query: 241 RDEIGQLYKAVGL 253 +EIGQLY+AVGL Sbjct: 242 SNEIGQLYQAVGL 254 >tr|A4KHM4|A4KHM4_MYCTU Tax_Id=395095 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis str. Haarlem] Length = 253 Score = 430 bits (1106), Expect = e-119 Identities = 215/253 (84%), Positives = 233/253 (92%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 M + E+ + RGIRLQKVLSQAGIASRRAAEK+I+DGRVEVDG VVTELGTRVDP +++ Sbjct: 1 MAEPEESREPRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVV 60 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG RV+LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRG K LFHVGRLDAD Sbjct: 61 RVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDAD 120 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPSHEVPKTYLATV G+VPRGLG+ LRAGIEL+DGP VD F Sbjct: 121 TEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDF 180 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRR+LAA GFPV+ALVR DIG VSLG+QRPGSVRALR Sbjct: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVRALR 240 Query: 241 RDEIGQLYKAVGL 253 +EIGQLY+AVGL Sbjct: 241 SNEIGQLYQAVGL 253 >tr|A2VIJ5|A2VIJ5_MYCTU Tax_Id=348776 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium tuberculosis C] Length = 253 Score = 430 bits (1106), Expect = e-119 Identities = 215/253 (84%), Positives = 233/253 (92%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 M + E+ + RGIRLQKVLSQAGIASRRAAEK+I+DGRVEVDG VVTELGTRVDP +++ Sbjct: 1 MAEPEESREPRGIRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVV 60 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG RV+LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRG K LFHVGRLDAD Sbjct: 61 RVDGARVVLDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDAD 120 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPSHEVPKTYLATV G+VPRGLG+ LRAGIEL+DGP VD F Sbjct: 121 TEGLMLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDF 180 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVDAIPGKTLVRVTLHEGRNRIVRR+LAA GFPV+ALVR DIG VSLG+QRPGSVRALR Sbjct: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQRPGSVRALR 240 Query: 241 RDEIGQLYKAVGL 253 +EIGQLY+AVGL Sbjct: 241 SNEIGQLYQAVGL 253 >tr|A0QH61|A0QH61_MYCA1 Tax_Id=243243 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium avium] Length = 248 Score = 424 bits (1091), Expect = e-117 Identities = 210/245 (85%), Positives = 232/245 (94%) Query: 9 QERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVI 68 + +GIRLQKVLSQAGIASRRAAEKLI+DGRVEVDGQVVTELGTRVDPD ++IRVDG RV+ Sbjct: 4 EAQGIRLQKVLSQAGIASRRAAEKLIVDGRVEVDGQVVTELGTRVDPDAAVIRVDGARVV 63 Query: 69 LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLT 128 LD+S VYLALNKPRG+HSTMSDDRGRPCIGDLIER+VRGNKNLFHVGRLDA+TEGLILLT Sbjct: 64 LDESQVYLALNKPRGVHSTMSDDRGRPCIGDLIERRVRGNKNLFHVGRLDAETEGLILLT 123 Query: 129 NDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPG 188 NDGELAHRLMHPSHEVPKTYLATV G++PRGLGK LRAGIEL+DG RVD FAVVDAIPG Sbjct: 124 NDGELAHRLMHPSHEVPKTYLATVTGSIPRGLGKTLRAGIELDDGMARVDEFAVVDAIPG 183 Query: 189 KTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLY 248 KTLVRVTLHEGRNRIVRR+LAA GFPV++LVR DIG +SLG+QRPGS+RAL RDE+G+LY Sbjct: 184 KTLVRVTLHEGRNRIVRRLLAAAGFPVESLVRTDIGPISLGKQRPGSIRALGRDEVGRLY 243 Query: 249 KAVGL 253 +AVGL Sbjct: 244 QAVGL 248 >tr|Q740D8|Q740D8_MYCPA Tax_Id=1770 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium paratuberculosis] Length = 247 Score = 422 bits (1086), Expect = e-116 Identities = 209/245 (85%), Positives = 231/245 (94%) Query: 9 QERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVI 68 + +GIRLQKVLSQAGIASRRAAEKLI+DGRVEVDGQVVTELGTRVDPD ++IRVDG RV+ Sbjct: 3 EAQGIRLQKVLSQAGIASRRAAEKLIVDGRVEVDGQVVTELGTRVDPDAAVIRVDGARVV 62 Query: 69 LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLT 128 LD+S VYLALNKPRG+HSTMSDDRGRPCIGDLIER+VRGNKNLFHVGRLDA+TEGLILLT Sbjct: 63 LDESQVYLALNKPRGVHSTMSDDRGRPCIGDLIERRVRGNKNLFHVGRLDAETEGLILLT 122 Query: 129 NDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPG 188 NDGELAHRLMHPSHEVPKTYLATV G++PRGLGK LRAGIEL+DG RVD FAVVD IPG Sbjct: 123 NDGELAHRLMHPSHEVPKTYLATVTGSIPRGLGKTLRAGIELDDGMARVDEFAVVDPIPG 182 Query: 189 KTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLY 248 KTLVRVTLHEGRNRIVRR+LAA GFPV++LVR DIG +SLG+QRPGS+RAL RDE+G+LY Sbjct: 183 KTLVRVTLHEGRNRIVRRLLAAAGFPVESLVRTDIGPISLGKQRPGSIRALGRDEVGRLY 242 Query: 249 KAVGL 253 +AVGL Sbjct: 243 QAVGL 247 >tr|Q1B7U8|Q1B7U8_MYCSS Tax_Id=164756 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium sp.] Length = 247 Score = 410 bits (1053), Expect = e-113 Identities = 200/242 (82%), Positives = 224/242 (92%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVLSQAGIASRR AEK+I+DGRVEVDG +VTELGTRVDP + IRVDG RV+LDD Sbjct: 6 GVRLQKVLSQAGIASRRVAEKMILDGRVEVDGHIVTELGTRVDPTAADIRVDGTRVLLDD 65 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 +LV+LA+NKPRGMHSTMSDDRGRPCIGDL+E +VRGNK LFHVGRLDADTEGL+LLTNDG Sbjct: 66 TLVHLAINKPRGMHSTMSDDRGRPCIGDLVEHRVRGNKGLFHVGRLDADTEGLMLLTNDG 125 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELAHRLMHPS+EVPKTY+ATV GTVPRGLGKKLRAG+EL+DGP RVD FAVVDA+PG+++ Sbjct: 126 ELAHRLMHPSYEVPKTYVATVLGTVPRGLGKKLRAGVELDDGPARVDDFAVVDAMPGRSM 185 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 VRVTLHEGR RIVRR+LAAVGFPVQ LVR DIG VSLGEQRPGS+R L R EIG+LYKAV Sbjct: 186 VRVTLHEGRKRIVRRLLAAVGFPVQELVRTDIGAVSLGEQRPGSIRVLTRKEIGELYKAV 245 Query: 252 GL 253 G+ Sbjct: 246 GM 247 >tr|A3Q0P6|A3Q0P6_MYCSJ Tax_Id=164757 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium sp.] Length = 247 Score = 410 bits (1053), Expect = e-113 Identities = 200/242 (82%), Positives = 224/242 (92%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVLSQAGIASRR AEK+I+DGRVEVDG +VTELGTRVDP + IRVDG RV+LDD Sbjct: 6 GVRLQKVLSQAGIASRRVAEKMILDGRVEVDGHIVTELGTRVDPTAADIRVDGTRVLLDD 65 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 +LV+LA+NKPRGMHSTMSDDRGRPCIGDL+E +VRGNK LFHVGRLDADTEGL+LLTNDG Sbjct: 66 TLVHLAINKPRGMHSTMSDDRGRPCIGDLVEHRVRGNKGLFHVGRLDADTEGLMLLTNDG 125 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELAHRLMHPS+EVPKTY+ATV GTVPRGLGKKLRAG+EL+DGP RVD FAVVDA+PG+++ Sbjct: 126 ELAHRLMHPSYEVPKTYVATVLGTVPRGLGKKLRAGVELDDGPARVDDFAVVDAMPGRSM 185 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 VRVTLHEGR RIVRR+LAAVGFPVQ LVR DIG VSLGEQRPGS+R L R EIG+LYKAV Sbjct: 186 VRVTLHEGRKRIVRRLLAAVGFPVQELVRTDIGAVSLGEQRPGSIRVLTRKEIGELYKAV 245 Query: 252 GL 253 G+ Sbjct: 246 GM 247 >tr|A1UH59|A1UH59_MYCSK Tax_Id=189918 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium sp.] Length = 247 Score = 410 bits (1053), Expect = e-113 Identities = 200/242 (82%), Positives = 224/242 (92%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVLSQAGIASRR AEK+I+DGRVEVDG +VTELGTRVDP + IRVDG RV+LDD Sbjct: 6 GVRLQKVLSQAGIASRRVAEKMILDGRVEVDGHIVTELGTRVDPTAADIRVDGTRVLLDD 65 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 +LV+LA+NKPRGMHSTMSDDRGRPCIGDL+E +VRGNK LFHVGRLDADTEGL+LLTNDG Sbjct: 66 TLVHLAINKPRGMHSTMSDDRGRPCIGDLVEHRVRGNKGLFHVGRLDADTEGLMLLTNDG 125 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELAHRLMHPS+EVPKTY+ATV GTVPRGLGKKLRAG+EL+DGP RVD FAVVDA+PG+++ Sbjct: 126 ELAHRLMHPSYEVPKTYVATVLGTVPRGLGKKLRAGVELDDGPARVDDFAVVDAMPGRSM 185 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 VRVTLHEGR RIVRR+LAAVGFPVQ LVR DIG VSLGEQRPGS+R L R EIG+LYKAV Sbjct: 186 VRVTLHEGRKRIVRRLLAAVGFPVQELVRTDIGAVSLGEQRPGSIRVLTRKEIGELYKAV 245 Query: 252 GL 253 G+ Sbjct: 246 GM 247 >tr|A0QYQ1|A0QYQ1_MYCS2 Tax_Id=246196 (rluB)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium smegmatis] Length = 247 Score = 409 bits (1050), Expect = e-112 Identities = 197/245 (80%), Positives = 226/245 (92%) Query: 9 QERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVI 68 +E+G+RLQKVLSQAGIASRR AE++IIDGRVEVDGQ+VTELGTRVDP + IRVDG R+I Sbjct: 3 EEQGVRLQKVLSQAGIASRRVAERMIIDGRVEVDGQIVTELGTRVDPAVADIRVDGSRII 62 Query: 69 LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLT 128 LDD++VYLA+NKPRGMHSTMSDDRGRPC+GDL+E +VRGNK LFHVGRLDADTEGL+LLT Sbjct: 63 LDDTMVYLAINKPRGMHSTMSDDRGRPCVGDLVEHRVRGNKKLFHVGRLDADTEGLLLLT 122 Query: 129 NDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPG 188 NDGELAHRLMHPS EVPKTY+ATV GTVPRGLGKKL+AG+EL+DGP VD FAVVD +PG Sbjct: 123 NDGELAHRLMHPSFEVPKTYVATVMGTVPRGLGKKLKAGVELDDGPAHVDDFAVVDTVPG 182 Query: 189 KTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLY 248 KT+V+VTLHEGRNRIVRR+LAAV FPVQ LVR +IG VSLG+QRPGS+RAL R E+G+LY Sbjct: 183 KTMVKVTLHEGRNRIVRRLLAAVDFPVQELVRTEIGSVSLGDQRPGSIRALTRKEVGELY 242 Query: 249 KAVGL 253 +AVGL Sbjct: 243 QAVGL 247 >sp|O05668|Y1370_MYCLE Tax_Id=1769 RecName: Full=Uncharacterized RNA pseudouridine synthase ML1370; EC=5.4.99.-; AltName: Full=RNA-uridine isomerase; AltName: Full=RNA pseudouridylate synthase;[Mycobacterium leprae] Length = 256 Score = 407 bits (1047), Expect = e-112 Identities = 204/256 (79%), Positives = 226/256 (88%), Gaps = 3/256 (1%) Query: 1 MTDTEDFEQERG---IRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDT 57 M + D +RG +RLQK+LS+AGIASRRAAEKLII+GRVEVDGQ+V ELGTRVDPD Sbjct: 1 MVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRVDPDV 60 Query: 58 SLIRVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRL 117 S++RVDGV+V++DDSLVYLALNKPRGM+STMSDDRGRPC+GDLIER+VRGNK LFHVGRL Sbjct: 61 SVVRVDGVKVVVDDSLVYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRL 120 Query: 118 DADTEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRV 177 DADTEGLILLTNDGELAHRLMHPSHEV KTYLATV G VPRGLGKKL G+EL+DGP V Sbjct: 121 DADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHV 180 Query: 178 DGFAVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVR 237 D FAVVDAIPGKTLVR+TLHEGR RIVRR+L A GFPV+ LVR DIG VSLG+QRPG +R Sbjct: 181 DDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLR 240 Query: 238 ALRRDEIGQLYKAVGL 253 AL RDEI QLYK VGL Sbjct: 241 ALLRDEIRQLYKEVGL 256 >tr|B8ZRI1|B8ZRI1_MYCLB Tax_Id=561304 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium leprae] Length = 257 Score = 407 bits (1047), Expect = e-112 Identities = 204/256 (79%), Positives = 226/256 (88%), Gaps = 3/256 (1%) Query: 1 MTDTEDFEQERG---IRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDT 57 M + D +RG +RLQK+LS+AGIASRRAAEKLII+GRVEVDGQ+V ELGTRVDPD Sbjct: 2 MVEIHDSRMDRGAGAVRLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRVDPDV 61 Query: 58 SLIRVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRL 117 S++RVDGV+V++DDSLVYLALNKPRGM+STMSDDRGRPC+GDLIER+VRGNK LFHVGRL Sbjct: 62 SVVRVDGVKVVVDDSLVYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRGNKKLFHVGRL 121 Query: 118 DADTEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRV 177 DADTEGLILLTNDGELAHRLMHPSHEV KTYLATV G VPRGLGKKL G+EL+DGP V Sbjct: 122 DADTEGLILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHV 181 Query: 178 DGFAVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVR 237 D FAVVDAIPGKTLVR+TLHEGR RIVRR+L A GFPV+ LVR DIG VSLG+QRPG +R Sbjct: 182 DDFAVVDAIPGKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSLGDQRPGCLR 241 Query: 238 ALRRDEIGQLYKAVGL 253 AL RDEI QLYK VGL Sbjct: 242 ALLRDEIRQLYKEVGL 257 >tr|A1TA74|A1TA74_MYCVP Tax_Id=350058 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium vanbaalenii] Length = 247 Score = 397 bits (1020), Expect = e-109 Identities = 197/253 (77%), Positives = 223/253 (88%), Gaps = 6/253 (2%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 MTD + GIRLQKVLSQAGIASRR AEK+I DGRVEVDG++VTELGTRVDP S+I Sbjct: 1 MTDND------GIRLQKVLSQAGIASRRVAEKMIRDGRVEVDGRIVTELGTRVDPAASVI 54 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG R+ +DD+LVYLA+NKPRGMHSTMSDDRGRPC+GDL+E +VRGNK LFHVGRLDAD Sbjct: 55 RVDGARITVDDTLVYLAINKPRGMHSTMSDDRGRPCVGDLVEHRVRGNKKLFHVGRLDAD 114 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPS EVPK+Y+ATV G+VP+GLG+KLR G+ELEDGPV+VD F Sbjct: 115 TEGLLLLTNDGELAHRLMHPSFEVPKSYVATVLGSVPKGLGRKLREGVELEDGPVQVDDF 174 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 AVVD PG+TLVRVTLHEGR IVRR+LA VGFPVQ LVR DIG VSLG+QRPGS+R L Sbjct: 175 AVVDTTPGRTLVRVTLHEGRKHIVRRLLAEVGFPVQELVRTDIGTVSLGDQRPGSIRVLT 234 Query: 241 RDEIGQLYKAVGL 253 + EIG+LYKAVGL Sbjct: 235 QKEIGELYKAVGL 247 >tr|A4T9Z6|A4T9Z6_MYCGI Tax_Id=350054 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium gilvum] Length = 247 Score = 396 bits (1017), Expect = e-108 Identities = 195/253 (77%), Positives = 225/253 (88%), Gaps = 6/253 (2%) Query: 1 MTDTEDFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLI 60 MTD + G+RLQKVLSQAGIASRR AEK+I DGRVEVD ++VTELGTRVDP S+I Sbjct: 1 MTDND------GVRLQKVLSQAGIASRRVAEKMIRDGRVEVDDRIVTELGTRVDPAESVI 54 Query: 61 RVDGVRVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDAD 120 RVDG R+ +DD+LV+LA+NKPRGMHSTMSDDRGRPC+GDL+E +VRGNK LFHVGRLDAD Sbjct: 55 RVDGARITVDDTLVHLAINKPRGMHSTMSDDRGRPCVGDLVEHRVRGNKKLFHVGRLDAD 114 Query: 121 TEGLILLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGF 180 TEGL+LLTNDGELAHRLMHPS+EVPK+Y+ATV G+VPRGLG+KLR G+EL+DGPV+VD F Sbjct: 115 TEGLLLLTNDGELAHRLMHPSYEVPKSYVATVLGSVPRGLGRKLREGVELDDGPVQVDDF 174 Query: 181 AVVDAIPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALR 240 A+VD PG+TLVRVTLHEGR IVRR+LA VGFPVQ LVR DIGGVSLG+QRPGS+RAL Sbjct: 175 ALVDTTPGRTLVRVTLHEGRKHIVRRLLAEVGFPVQNLVRTDIGGVSLGDQRPGSIRALT 234 Query: 241 RDEIGQLYKAVGL 253 + EIG+LYKAVGL Sbjct: 235 QKEIGELYKAVGL 247 >tr|B1MB30|B1MB30_MYCA9 Tax_Id=561007 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Mycobacterium abscessus] Length = 263 Score = 351 bits (900), Expect = 5e-95 Identities = 174/244 (71%), Positives = 205/244 (84%) Query: 10 ERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVIL 69 E GIRLQKVLSQAGIASRR AE++I DGRVEVDG++VTE G R+DP +++RVDG RVI+ Sbjct: 20 EEGIRLQKVLSQAGIASRRVAERMIYDGRVEVDGEIVTEQGRRIDPAVNVVRVDGARVIM 79 Query: 70 DDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTN 129 + LVYLALNKP GM STMSDDRGRPC+G LIE +VRGN+ + +VGRLDADT GLILLTN Sbjct: 80 NTDLVYLALNKPFGMLSTMSDDRGRPCVGKLIEERVRGNQGVRNVGRLDADTVGLILLTN 139 Query: 130 DGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGK 189 DGEL HRLMHPS+EVPKTY+ATVAGT+PRGLG++LR G+EL DGP +VD F + G+ Sbjct: 140 DGELTHRLMHPSYEVPKTYIATVAGTIPRGLGRQLRDGVELADGPAKVDEFKFLGTTDGQ 199 Query: 190 TLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYK 249 ++V++TLHEGRNRIVRRM+ A G PV LVR IG V+LG QRPGS+RAL RDEIG LYK Sbjct: 200 SMVQLTLHEGRNRIVRRMMDAAGHPVVELVRTKIGDVTLGNQRPGSLRALGRDEIGSLYK 259 Query: 250 AVGL 253 AVGL Sbjct: 260 AVGL 263 >tr|C2AQV1|C2AQV1_TSUPA Tax_Id=521096 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Tsukamurella paurometabola DSM 20162] Length = 263 Score = 351 bits (900), Expect = 5e-95 Identities = 170/241 (70%), Positives = 205/241 (85%) Query: 13 IRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDDS 72 IRLQKVL+QAG+ASRR AE++I DGRVEVDG++VTE G RVDP +++RVDGVRV+++++ Sbjct: 23 IRLQKVLAQAGVASRRVAEEMIADGRVEVDGEIVTEQGLRVDPSVAVVRVDGVRVVVNEN 82 Query: 73 LVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDGE 132 LV+LALNKPRG HSTMSDD GRPC+GD++ +V + LFHVGRLDADTEGL+L+TNDGE Sbjct: 83 LVHLALNKPRGWHSTMSDDMGRPCVGDIVAERVAAGQRLFHVGRLDADTEGLLLVTNDGE 142 Query: 133 LAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTLV 192 LAHRLMHPS+EVPKTYLA VAG VPR LGKKLR G+ELEDGPV VD F+V++A GK+ V Sbjct: 143 LAHRLMHPSYEVPKTYLAWVAGEVPRNLGKKLRDGVELEDGPVTVDRFSVLEAAEGKSTV 202 Query: 193 RVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAVG 252 RV LHEGR IVRR+LA VG PVQ LVR +G V+LG+QRPGS+R L RDE+ LYKAVG Sbjct: 203 RVVLHEGRKHIVRRLLAEVGHPVQRLVRTHVGTVALGDQRPGSLRVLGRDEVESLYKAVG 262 Query: 253 L 253 + Sbjct: 263 M 263 >tr|D0L940|D0L940_GORB4 Tax_Id=526226 SubName: Full=Pseudouridine synthase;[Gordonia bronchialis] Length = 329 Score = 350 bits (897), Expect = 1e-94 Identities = 167/242 (69%), Positives = 203/242 (83%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVL+QAG+ASRR AE++I GRVE+DG++VTE G R+DPDT++IRVDG RVI+D+ Sbjct: 88 GVRLQKVLAQAGVASRRGAEEMIAAGRVEIDGEIVTEQGLRIDPDTAIIRVDGARVIIDE 147 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 + YLALNKPRG STM+DD+GRPC+GD++ +V + LFHVGRLDADTEGL+LLTNDG Sbjct: 148 TRQYLALNKPRGWQSTMADDQGRPCVGDIVAERVMAGQRLFHVGRLDADTEGLLLLTNDG 207 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELAHRLMHPS+EVPKTYLATV G VPR L + LR G+EL+DGPV VD +VD G++L Sbjct: 208 ELAHRLMHPSYEVPKTYLATVRGEVPRSLSRMLRDGVELDDGPVAVDKLTIVDVHEGQSL 267 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 +R+TLHEGRNRIVRRM+ VGFPV LVR +G V+LGEQRPGS+R L RDE+G LYKAV Sbjct: 268 LRITLHEGRNRIVRRMMDEVGFPVVELVRTHVGSVALGEQRPGSLRVLGRDEVGALYKAV 327 Query: 252 GL 253 GL Sbjct: 328 GL 329 >tr|C1ASX4|C1ASX4_RHOOB Tax_Id=632772 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Rhodococcus opacus] Length = 350 Score = 333 bits (855), Expect = 8e-90 Identities = 163/245 (66%), Positives = 200/245 (81%) Query: 9 QERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVI 68 Q G+RLQKVL+QAG+ASRRAAE+LI GRVEVDG++V E G R+DP+ +++RVDGVRV+ Sbjct: 106 QGDGMRLQKVLAQAGVASRRAAEELISQGRVEVDGRIVIEQGLRIDPENAVVRVDGVRVV 165 Query: 69 LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLT 128 + LV+LALNKPRG STMSDD GRPC+GD++ +V + LFHVGRLDADTEGL+LLT Sbjct: 166 VQKDLVHLALNKPRGWQSTMSDDLGRPCVGDIVSERVAAGQRLFHVGRLDADTEGLLLLT 225 Query: 129 NDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPG 188 NDG+LAHRLMHPS EV KTYLATV+G + RG+GKKL+ G+EL+DGP +VD F ++D G Sbjct: 226 NDGDLAHRLMHPSFEVSKTYLATVSGALERGVGKKLKEGVELDDGPAKVDTFTLLDINEG 285 Query: 189 KTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLY 248 K+LVRVTLHEGR IVRR+ AVG PV LVR DIG V+LG+QRPG++R L R E+G LY Sbjct: 286 KSLVRVTLHEGRKHIVRRLFDAVGHPVIRLVRTDIGAVALGDQRPGTLRVLGRGEVGGLY 345 Query: 249 KAVGL 253 AVGL Sbjct: 346 GAVGL 350 >tr|Q0SI80|Q0SI80_RHOSR Tax_Id=101510 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Rhodococcus sp.] Length = 241 Score = 331 bits (848), Expect = 5e-89 Identities = 161/241 (66%), Positives = 198/241 (82%) Query: 13 IRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDDS 72 +RLQKVL+QAG+ASRRAAE+LI GRVEVDG++V E G R+DP+ +++RVDGVRV++ Sbjct: 1 MRLQKVLAQAGVASRRAAEELISQGRVEVDGRIVIEQGLRIDPENAVVRVDGVRVVVQKD 60 Query: 73 LVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDGE 132 LV+LALNKPRG STMSDD GRPC+GD++ +V + LFHVGRLDADTEGL+LLTNDG+ Sbjct: 61 LVHLALNKPRGWQSTMSDDLGRPCVGDIVSERVAAGQRLFHVGRLDADTEGLLLLTNDGD 120 Query: 133 LAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTLV 192 LAHRLMHPS EV KTYLATV+G + RG+GKKL+ G+EL+DGP +VD F ++D GK+LV Sbjct: 121 LAHRLMHPSFEVSKTYLATVSGALERGVGKKLKEGVELDDGPAKVDTFTLLDINEGKSLV 180 Query: 193 RVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAVG 252 RVTLHEGR IVRR+ AVG PV LVR DIG V+LG+QRPG++R L R E+G LY AVG Sbjct: 181 RVTLHEGRKHIVRRLFDAVGHPVIRLVRTDIGAVALGDQRPGTLRVLGRGEVGGLYGAVG 240 Query: 253 L 253 L Sbjct: 241 L 241 >tr|C1A029|C1A029_RHOE4 Tax_Id=234621 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Rhodococcus erythropolis] Length = 267 Score = 326 bits (836), Expect = 1e-87 Identities = 158/242 (65%), Positives = 195/242 (80%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVL+QAG+ASRRAAE+LI GRVEVDG++V E G RVDP+ +++RVDGVRV++ Sbjct: 26 GVRLQKVLAQAGVASRRAAEELIDQGRVEVDGRIVVEQGLRVDPENAVVRVDGVRVVVQK 85 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 LVYLA+NKPRG TMSDD GRPC+GD++ +V+ + LFHVGRLDADTEGL+L TNDG Sbjct: 86 DLVYLAMNKPRGWQCTMSDDLGRPCVGDIVSERVQSGQRLFHVGRLDADTEGLLLFTNDG 145 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 +LAHRLMHPS EVPKTYLATV G V R GK+LR G+ L+DGP +VD F V++ GKTL Sbjct: 146 DLAHRLMHPSFEVPKTYLATVHGVVERSTGKQLRDGVTLDDGPAKVDAFTVLEINEGKTL 205 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 V++ LHEGR IVRR+L AVG PV LVR ++G V+LG+QRPG+ R L R E+G LY+AV Sbjct: 206 VKLVLHEGRKHIVRRLLDAVGHPVVRLVRTNVGVVALGDQRPGTQRVLGRSEVGGLYEAV 265 Query: 252 GL 253 GL Sbjct: 266 GL 267 >tr|C6WA55|C6WA55_ACTMD Tax_Id=446462 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Actinosynnema mirum] Length = 246 Score = 326 bits (836), Expect = 1e-87 Identities = 161/242 (66%), Positives = 195/242 (80%), Gaps = 3/242 (1%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVL++AGIASRR AE+LI GRV+VDG+VV E G R+DPD +++ VDGVRV+L + Sbjct: 8 GVRLQKVLAKAGIASRRVAEELIELGRVQVDGEVVREQGRRIDPDKAVVHVDGVRVVLQE 67 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 +V L LNKPRGM STM DD RPC+GDL+ V + LFHVGRLDADTEGL+L+TNDG Sbjct: 68 DVVTLVLNKPRGMLSTMHDDAHRPCVGDLL---VNRKERLFHVGRLDADTEGLLLVTNDG 124 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 +LAHRLMHPS+EVPKTYLA V G +PR LGK+LR+GIELEDGPV+VD F ++ ++PG+ L Sbjct: 125 DLAHRLMHPSYEVPKTYLAEVPGPIPRDLGKRLRSGIELEDGPVKVDSFKLISSLPGRAL 184 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 V V LHEGR IVRR+L AVG PVQ LVR +G V LG QRPGS+R L R E+G LYKAV Sbjct: 185 VEVVLHEGRKHIVRRLLEAVGHPVQTLVRTAVGEVRLGNQRPGSLRVLNRQEVGSLYKAV 244 Query: 252 GL 253 G+ Sbjct: 245 GM 246 >tr|C3JWQ3|C3JWQ3_RHOER Tax_Id=596309 RecName: Full=Pseudouridine synthase; EC=5.4.99.-; Flags: Fragment;[Rhodococcus erythropolis SK121] Length = 354 Score = 326 bits (836), Expect = 1e-87 Identities = 158/242 (65%), Positives = 195/242 (80%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVL+QAG+ASRRAAE+LI GRVEVDG++V E G RVDP+ +++RVDGVRV++ Sbjct: 113 GVRLQKVLAQAGVASRRAAEELIDQGRVEVDGRIVVEQGLRVDPENAVVRVDGVRVVVQK 172 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 LVYLA+NKPRG TMSDD GRPC+GD++ +V+ + LFHVGRLDADTEGL+L TNDG Sbjct: 173 DLVYLAMNKPRGWQCTMSDDLGRPCVGDIVSERVQSGQRLFHVGRLDADTEGLLLFTNDG 232 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 +LAHRLMHPS EVPKTYLATV G V R GK+LR G+ L+DGP +VD F V++ GKTL Sbjct: 233 DLAHRLMHPSFEVPKTYLATVHGVVERSTGKQLRDGVTLDDGPAKVDAFTVLEINEGKTL 292 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 V++ LHEGR IVRR+L AVG PV LVR ++G V+LG+QRPG+ R L R E+G LY+AV Sbjct: 293 VKLVLHEGRKHIVRRLLDAVGHPVVRLVRTNVGVVALGDQRPGTQRVLGRSEVGGLYEAV 352 Query: 252 GL 253 GL Sbjct: 353 GL 354 >tr|C7MZG0|C7MZG0_SACVD Tax_Id=471857 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Saccharomonospora viridis] Length = 247 Score = 311 bits (798), Expect = 3e-83 Identities = 156/245 (63%), Positives = 190/245 (77%), Gaps = 3/245 (1%) Query: 8 EQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRV 67 + G+RLQKVL++AG+ASRRA+E+LI GRV VDG VV ELG RVDPDT++I VDG+RV Sbjct: 5 DSSEGVRLQKVLAKAGVASRRASEELIAAGRVSVDGVVVRELGRRVDPDTAVIHVDGIRV 64 Query: 68 ILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILL 127 + D LVYLALNKPRG+HSTMSD +GRPC+GD + + + LFHVGRLDADTEGL+LL Sbjct: 65 QVRDDLVYLALNKPRGVHSTMSDAQGRPCVGDYVADRP---ERLFHVGRLDADTEGLLLL 121 Query: 128 TNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIP 187 TNDG+LAH+LMHPS V KTYLA V G V RGLGK+LRAG++L DGPV D F + D P Sbjct: 122 TNDGDLAHKLMHPSFHVTKTYLAEVEGAVARGLGKRLRAGVQLSDGPVTADAFRIKDVRP 181 Query: 188 GKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQL 247 ++LV + LHEGR IVRR+LA VG PV+ LVR IG V LG +PG++R L + EIG L Sbjct: 182 NRSLVEIVLHEGRKHIVRRLLAEVGHPVRKLVRTAIGEVRLGTTKPGTLRTLTQQEIGLL 241 Query: 248 YKAVG 252 Y+AVG Sbjct: 242 YRAVG 246 >tr|B8HGG0|B8HGG0_ARTCA Tax_Id=452863 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Arthrobacter chlorophenolicus] Length = 403 Score = 310 bits (794), Expect = 1e-82 Identities = 147/242 (60%), Positives = 187/242 (77%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKV++ AG+ASRR E++I +GRVEVDGQVVTELG R+DP T++I VDG+R+ LD+ Sbjct: 162 GVRLQKVMASAGVASRRVCEEMIAEGRVEVDGQVVTELGVRIDPATAVIHVDGLRIQLDE 221 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 +LVY+ NKP+G+ STM D GRPCI D ++ + LFHVGRLD TEGL+LLTNDG Sbjct: 222 NLVYMVFNKPKGVVSTMEDPDGRPCISDFLKNNKNTGERLFHVGRLDVATEGLLLLTNDG 281 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELA+RL HPS+EVPKTYL V G P+G+G +L+AG+ELEDGP VD F +VD+ PG L Sbjct: 282 ELANRLTHPSYEVPKTYLVQVRGPFPQGIGAQLKAGVELEDGPAAVDSFRLVDSTPGHVL 341 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 + V LH G+NRIVRRM AVGFPVQ LVR+ +G + LG+QR GS+R L + E+G L +V Sbjct: 342 IEVVLHSGKNRIVRRMFDAVGFPVQRLVRVKVGPIGLGDQRQGSIRNLGKQEVGHLLASV 401 Query: 252 GL 253 GL Sbjct: 402 GL 403 >tr|Q5YY84|Q5YY84_NOCFA Tax_Id=37329 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Nocardia farcinica] Length = 237 Score = 305 bits (782), Expect = 2e-81 Identities = 151/237 (63%), Positives = 191/237 (80%), Gaps = 1/237 (0%) Query: 18 VLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDDSLVYLA 77 +L++AG+ASRRAAE++I GRVEVDG +V E G R+DP T+++RVDGVRV++ D VY+A Sbjct: 1 MLAKAGVASRRAAEEMIDQGRVEVDGVIVREQGLRIDPQTAVVRVDGVRVVVRDEQVYVA 60 Query: 78 LNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDGELAHRL 137 LNKP+G STMSDD GRPC+GD++ ++ + LFHVGRLDADTEGL+LLTNDG+LAHRL Sbjct: 61 LNKPKGWQSTMSDDLGRPCVGDIVAERIAAGQRLFHVGRLDADTEGLLLLTNDGDLAHRL 120 Query: 138 MHPSHEVPKTYLATVAGTV-PRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTLVRVTL 196 MHPS EV KTYLATV G V + +GK+LR GIELEDGP +VD F V++ G++LV++ L Sbjct: 121 MHPSFEVSKTYLATVHGEVHHKVIGKRLRDGIELEDGPAKVDRFQVLELGEGRSLVKIVL 180 Query: 197 HEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAVGL 253 HEGR IVRR+L AVG PV LVR IG V+LG+QRPG++R L RDEIG+LY+AV L Sbjct: 181 HEGRKHIVRRLLDAVGHPVTRLVRTHIGPVALGDQRPGTLRVLGRDEIGKLYEAVSL 237 >tr|A1R5C3|A1R5C3_ARTAT Tax_Id=290340 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Arthrobacter aurescens] Length = 404 Score = 305 bits (782), Expect = 2e-81 Identities = 146/248 (58%), Positives = 186/248 (75%) Query: 6 DFEQERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGV 65 D G+RLQKV++QAG+ASRR E++I++GRVEVDG V TELG RVDP +++I VDG+ Sbjct: 157 DLHDVDGVRLQKVMAQAGVASRRVCEEMILEGRVEVDGVVTTELGMRVDPTSAVIHVDGI 216 Query: 66 RVILDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLI 125 R+ LD++LVY+ NKP+G+ STM D GRPCI D ++ + LFHVGRLD TEGL+ Sbjct: 217 RIQLDETLVYMVFNKPKGVVSTMEDPEGRPCISDFLKNNKNKGERLFHVGRLDVATEGLL 276 Query: 126 LLTNDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDA 185 LLTNDGELA+RL HPS+EVPKTYL V G P+G+G KL+ G+ELEDG VD F +VD+ Sbjct: 277 LLTNDGELANRLTHPSYEVPKTYLVQVRGPFPQGVGAKLKNGVELEDGVAAVDSFRLVDS 336 Query: 186 IPGKTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIG 245 PG L+ V LH G+NRIVRRM AVGFPV+ LVR+ +G + LG+QR GS+R L R E+G Sbjct: 337 TPGHVLIEVVLHSGKNRIVRRMFDAVGFPVERLVRVKVGPIGLGDQRQGSIRNLGRQEVG 396 Query: 246 QLYKAVGL 253 L +VGL Sbjct: 397 HLLASVGL 404 >tr|Q8FTK7|Q8FTK7_COREF Tax_Id=152794 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium efficiens] Length = 329 Score = 305 bits (780), Expect = 4e-81 Identities = 152/242 (62%), Positives = 184/242 (76%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 GIRLQKVL+QAG+ASRR AE LI +GRVEV+G++VT GTRV+P++ +IRVDGVR+ +++ Sbjct: 88 GIRLQKVLAQAGVASRRHAEILIDNGRVEVNGRIVTTQGTRVNPNSDVIRVDGVRININE 147 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 L Y LNKPRGMHSTMSDD GRPC+GDL+ K + LFHVGRLDADTEGL+LLTNDG Sbjct: 148 DLEYFVLNKPRGMHSTMSDDLGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDG 207 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELA+RLMHP +EV KTYLATV G L LR GIELEDGP + D ++D GK+L Sbjct: 208 ELANRLMHPKYEVRKTYLATVRGEAGPNLVTTLRKGIELEDGPAKADYVQIIDTFQGKSL 267 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 +R+ +HEGR IVRRML GFPV+ LVR + V LGEQ+PGS+RAL E+ LYK V Sbjct: 268 IRLEIHEGRKHIVRRMLDEAGFPVERLVRTKLHTVQLGEQKPGSLRALNASELASLYKVV 327 Query: 252 GL 253 L Sbjct: 328 EL 329 >tr|C8NNL7|C8NNL7_COREF Tax_Id=196164 SubName: Full=RNA pseudouridine synthase; EC=4.2.1.70;[Corynebacterium efficiens YS-314] Length = 329 Score = 305 bits (780), Expect = 4e-81 Identities = 152/242 (62%), Positives = 184/242 (76%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 GIRLQKVL+QAG+ASRR AE LI +GRVEV+G++VT GTRV+P++ +IRVDGVR+ +++ Sbjct: 88 GIRLQKVLAQAGVASRRHAEILIDNGRVEVNGRIVTTQGTRVNPNSDVIRVDGVRININE 147 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 L Y LNKPRGMHSTMSDD GRPC+GDL+ K + LFHVGRLDADTEGL+LLTNDG Sbjct: 148 DLEYFVLNKPRGMHSTMSDDLGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDG 207 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELA+RLMHP +EV KTYLATV G L LR GIELEDGP + D ++D GK+L Sbjct: 208 ELANRLMHPKYEVRKTYLATVRGEAGPNLVTTLRKGIELEDGPAKADYVQIIDTFQGKSL 267 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 +R+ +HEGR IVRRML GFPV+ LVR + V LGEQ+PGS+RAL E+ LYK V Sbjct: 268 IRLEIHEGRKHIVRRMLDEAGFPVERLVRTKLHTVQLGEQKPGSLRALNASELASLYKVV 327 Query: 252 GL 253 L Sbjct: 328 EL 329 >tr|Q4JVW6|Q4JVW6_CORJK Tax_Id=306537 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium jeikeium] Length = 290 Score = 301 bits (772), Expect = 3e-80 Identities = 146/241 (60%), Positives = 187/241 (77%) Query: 13 IRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDDS 72 +RLQKVL+ AG+ASRR +EKLI GRVEV+G+VV ++GTR+DP ++RVDG RV +++ Sbjct: 50 VRLQKVLASAGVASRRMSEKLIAAGRVEVNGEVVVKMGTRIDPSVDIVRVDGERVQVNEE 109 Query: 73 LVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDGE 132 +VY LNKPRG+HSTMSDD GRPC+GDL+ +++ + LFHVGRLDA TEGL+LLTNDGE Sbjct: 110 MVYFVLNKPRGVHSTMSDDLGRPCVGDLVGTRLKEGQGLFHVGRLDAQTEGLLLLTNDGE 169 Query: 133 LAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTLV 192 LA+RLMHP +EV KTY+ATV G R L ++L+ G+EL+DG R D +VD GK+L+ Sbjct: 170 LANRLMHPKYEVKKTYMATVLGEASRKLIRELKDGVELDDGIARADSVQIVDVWQGKSLI 229 Query: 193 RVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAVG 252 +V LHEGR IVRRML GFPVQALVR I V LGEQ+PG++RAL + E+ +YK VG Sbjct: 230 KVELHEGRKHIVRRMLKEAGFPVQALVRTKIHTVQLGEQKPGTIRALNQAELQSMYKKVG 289 Query: 253 L 253 L Sbjct: 290 L 290 >tr|A4FKA2|A4FKA2_SACEN Tax_Id=405948 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Saccharopolyspora erythraea] Length = 253 Score = 301 bits (772), Expect = 3e-80 Identities = 148/242 (61%), Positives = 189/242 (78%), Gaps = 3/242 (1%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVLSQAG+ASRRAAE++I++GRVEV+G++V ELGTRVDPDT++I VDG R++++ Sbjct: 15 GVRLQKVLSQAGVASRRAAEQMIVEGRVEVNGEIVLELGTRVDPDTAVIHVDGNRIMVNA 74 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 L +L LNKP+G+ TMSDD+GRPCIGD + + L+HVGRLD D+EGL+L+TNDG Sbjct: 75 DLTHLLLNKPKGILCTMSDDQGRPCIGDYLRER---QGRLYHVGRLDVDSEGLLLITNDG 131 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELAHRLMHPS+ + KTYLA V G +P+ LG++LR GIELEDGPV+VD F +VD G+ L Sbjct: 132 ELAHRLMHPSYRILKTYLAEVPGPIPKNLGRELRNGIELEDGPVKVDSFKLVDVNEGRAL 191 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 V V LHEGR +VRR+L VG PV LVR +G V L +R G++R L R EI LY+AV Sbjct: 192 VEVVLHEGRKHVVRRLLKQVGHPVLRLVRTAVGDVRLTTERQGAIRPLDRKEISSLYRAV 251 Query: 252 GL 253 GL Sbjct: 252 GL 253 >tr|C8RSZ6|C8RSZ6_CORJE Tax_Id=525262 (rluB)SubName: Full=RNA pseudouridylate synthase; EC=4.2.1.70;[Corynebacterium jeikeium ATCC 43734] Length = 290 Score = 301 bits (772), Expect = 3e-80 Identities = 146/241 (60%), Positives = 187/241 (77%) Query: 13 IRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDDS 72 +RLQKVL+ AG+ASRR +EKLI GRVEV+G+VV ++GTR+DP ++RVDG RV +++ Sbjct: 50 VRLQKVLASAGVASRRMSEKLIAAGRVEVNGEVVVKMGTRIDPSVDIVRVDGERVQVNEE 109 Query: 73 LVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDGE 132 +VY LNKPRG+HSTMSDD GRPC+GDL+ +++ + LFHVGRLDA TEGL+LLTNDGE Sbjct: 110 MVYFVLNKPRGVHSTMSDDLGRPCVGDLVGTRLKEGQGLFHVGRLDAQTEGLLLLTNDGE 169 Query: 133 LAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTLV 192 LA+RLMHP +EV KTY+ATV G R L ++L+ G+EL+DG R D +VD GK+L+ Sbjct: 170 LANRLMHPKYEVKKTYMATVLGEASRKLIRELKDGVELDDGIARADSVQIVDVWQGKSLI 229 Query: 193 RVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAVG 252 +V LHEGR IVRRML GFPVQALVR I V LGEQ+PG++RAL + E+ +YK VG Sbjct: 230 KVELHEGRKHIVRRMLKEAGFPVQALVRTKIHTVQLGEQKPGTIRALNQAELQSMYKKVG 289 Query: 253 L 253 L Sbjct: 290 L 290 >tr|Q6NHE3|Q6NHE3_CORDI Tax_Id=1717 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium diphtheriae] Length = 321 Score = 299 bits (765), Expect = 2e-79 Identities = 148/242 (61%), Positives = 184/242 (76%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 GIRLQKVL+QAG+ASRR AE LI GRVEV+G++V G RV+P+ +IRVDGVRV +++ Sbjct: 80 GIRLQKVLAQAGVASRRHAEILIDAGRVEVNGKIVMTQGMRVNPNVDVIRVDGVRVNVNE 139 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 +L Y LNKPRG+ STMSDD GRPC+GD++ ++ + LFHVGRLDA TEGL+LLTNDG Sbjct: 140 NLQYFVLNKPRGLQSTMSDDMGRPCVGDIVGERISAGQRLFHVGRLDAATEGLLLLTNDG 199 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELA+RLMHP +EV KTYLATV G + L K+LR GIEL+DGP + D ++D GK+L Sbjct: 200 ELANRLMHPRYEVSKTYLATVLGEADKRLVKQLRDGIELDDGPAKADLVQIIDTFQGKSL 259 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 +R+ LHEGR IVRRML GFPVQ LVR I + LGEQ PG++RAL E+ LYKAV Sbjct: 260 IRIELHEGRKHIVRRMLKTAGFPVQRLVRTKIHTIQLGEQTPGAIRALNSSELASLYKAV 319 Query: 252 GL 253 G+ Sbjct: 320 GM 321 >tr|A0JV58|A0JV58_ARTS2 Tax_Id=290399 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Arthrobacter sp.] Length = 406 Score = 298 bits (763), Expect = 4e-79 Identities = 146/242 (60%), Positives = 186/242 (76%), Gaps = 2/242 (0%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 GIRLQKV++ AG+ASRR E++I +GRVEVDG+VVTELG RVDP T++I VDG+R+ LD+ Sbjct: 167 GIRLQKVMASAGVASRRVCEEMISEGRVEVDGKVVTELGVRVDPKTAVIHVDGLRIQLDE 226 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 ++VY+ NKP+G+ STM D GRPCI D + R G + LFHVGRLD TEGL+LLTNDG Sbjct: 227 NMVYMVFNKPKGVVSTMEDPDGRPCISDFV-RNTHGER-LFHVGRLDVATEGLLLLTNDG 284 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELA+RL HPS+EVPKTYL V G P+G+G +L+AG+ELEDG VD F +VD+ PG L Sbjct: 285 ELANRLTHPSYEVPKTYLVQVRGPFPQGIGAQLKAGVELEDGMASVDSFKLVDSTPGHVL 344 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 + V LH G+NRIVRR+ AVGFPV LVR+ +G + LG+QR GS+R L + E+G L +V Sbjct: 345 IEVVLHSGKNRIVRRLFDAVGFPVLRLVRVKVGPIGLGDQRQGSIRNLGKQEVGHLLASV 404 Query: 252 GL 253 GL Sbjct: 405 GL 406 >tr|C0VWF7|C0VWF7_9CORY Tax_Id=548477 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium glucuronolyticum ATCC 51867] Length = 349 Score = 297 bits (761), Expect = 7e-79 Identities = 150/242 (61%), Positives = 183/242 (75%) Query: 10 ERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVIL 69 E G+RLQKVL+QAG+ASRR +E+LI GRVEV+G++V G RVDPDT++IRVDGVRV + Sbjct: 106 EGGVRLQKVLAQAGVASRRMSEELIAQGRVEVNGEIVMRQGVRVDPDTAVIRVDGVRVKV 165 Query: 70 DDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTN 129 ++ LVY+ALNKP G+ STM DD GRPC+GD++ KV +LFHVGRLDA TEGL+LLTN Sbjct: 166 NEDLVYIALNKPLGVQSTMKDDMGRPCVGDIVGEKVDAGLHLFHVGRLDAKTEGLLLLTN 225 Query: 130 DGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGK 189 DGELA+RLMHP + V KTYLATV G R L KKLR G++LEDG + D +VD G+ Sbjct: 226 DGELANRLMHPKYHVSKTYLATVLGEADRELVKKLREGVDLEDGIAKADYVQIVDTYEGR 285 Query: 190 TLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYK 249 +L+RV LHEGR IVRRML +GFPVQ LVR I V LGE PG++R L E+ LYK Sbjct: 286 SLIRVELHEGRKHIVRRMLKELGFPVQQLVRTKIHTVQLGELTPGAIRHLNDSELRALYK 345 Query: 250 AV 251 AV Sbjct: 346 AV 347 >tr|B1VH07|B1VH07_CORU7 Tax_Id=504474 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium urealyticum] Length = 291 Score = 296 bits (758), Expect = 1e-78 Identities = 147/244 (60%), Positives = 187/244 (76%) Query: 10 ERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVIL 69 E +RLQKVL+ AG+ASRR +EKLI GRVEV+G+VV +G R+DP+ ++RVDGVRV + Sbjct: 48 EDKVRLQKVLAAAGVASRRMSEKLIAAGRVEVNGKVVDRMGVRIDPNKDVVRVDGVRVQV 107 Query: 70 DDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTN 129 +D + Y NKPRG+ STMSDD GRP +G+ I+ +++ + LFHVGRLDA TEGL+LLTN Sbjct: 108 NDEMHYYIFNKPRGVQSTMSDDMGRPSVGNFIDERLKQGQGLFHVGRLDAQTEGLLLLTN 167 Query: 130 DGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGK 189 DGELA+RLMHPS+EV KTY+ATV G +GL +L+ GIEL+DG + D +VD GK Sbjct: 168 DGELANRLMHPSYEVSKTYMATVLGEAKKGLVHELKKGIELDDGIAKADDVQIVDVWQGK 227 Query: 190 TLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYK 249 +L+++ LHEGR IVRR+L A GFPVQALVR I V LG+Q+PGSVRAL R E+ LYK Sbjct: 228 SLIKLELHEGRKHIVRRLLKAAGFPVQALVRTKIHTVQLGDQKPGSVRALNRSELTSLYK 287 Query: 250 AVGL 253 AVGL Sbjct: 288 AVGL 291 >tr|C5C6J9|C5C6J9_BEUC1 Tax_Id=471853 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Beutenbergia cavernae] Length = 245 Score = 296 bits (757), Expect = 2e-78 Identities = 149/242 (61%), Positives = 185/242 (76%), Gaps = 3/242 (1%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVL+ AG+ SRRA E LI GRV VDG+VV ELGTRVDP ++I VDG+R+ LD Sbjct: 7 GVRLQKVLAGAGLGSRRACEDLISAGRVSVDGEVVRELGTRVDPTAAVIHVDGLRLQLDP 66 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 +V LALNKPRG+HSTM DDRGRP + +L+ + + LFHVGRLDADTEGL+LLTNDG Sbjct: 67 GVVTLALNKPRGVHSTMHDDRGRPALAELVADRP---ERLFHVGRLDADTEGLLLLTNDG 123 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELAHRL HPS+EVPKTY+A V G V RGLG++L+ GIEL+DGP RVD F +++ P + Sbjct: 124 ELAHRLAHPSYEVPKTYVARVTGRVARGLGRRLKDGIELDDGPARVDRFTILEQGPDSAV 183 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 V + LHEGRNRIVRR+L A G PVQ L R +G V LG+ RPG+ R + +E+G+L +V Sbjct: 184 VELVLHEGRNRIVRRLLDAAGHPVQRLTRTRVGPVLLGQLRPGATRVIDGEELGRLMSSV 243 Query: 252 GL 253 GL Sbjct: 244 GL 245 >tr|Q8NQK8|Q8NQK8_CORGL Tax_Id=1718 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium glutamicum] Length = 252 Score = 295 bits (755), Expect = 3e-78 Identities = 145/242 (59%), Positives = 180/242 (74%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVL+QAG+ASRR AE LI GRVEV+ ++VT G RVDP+ +IRVDGVR+ +++ Sbjct: 11 GVRLQKVLAQAGVASRRHAEILIDQGRVEVNDRIVTTQGVRVDPNNDVIRVDGVRIHINE 70 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 L Y LNKPRGMHSTMSD+ GRPC+GDL+ K + LFHVGRLDADTEGL+LLTNDG Sbjct: 71 DLEYFVLNKPRGMHSTMSDELGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDG 130 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELA+RLMHP +EV KTYLATV G L LR G+ELEDGP + D ++D GK+L Sbjct: 131 ELANRLMHPKYEVSKTYLATVRGEATNKLVSALRDGVELEDGPAKADFAQIIDVFQGKSL 190 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 +R+ +HEGR IVRR+ +GFPV+ LVR + V LG+Q+PGS+RAL E+ LYK V Sbjct: 191 LRIEIHEGRKHIVRRLFDELGFPVERLVRTKLHTVQLGDQKPGSLRALNSSELTSLYKVV 250 Query: 252 GL 253 L Sbjct: 251 QL 252 >tr|Q6M5E9|Q6M5E9_CORGL Tax_Id=1718 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium glutamicum] Length = 320 Score = 295 bits (755), Expect = 3e-78 Identities = 145/242 (59%), Positives = 180/242 (74%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVL+QAG+ASRR AE LI GRVEV+ ++VT G RVDP+ +IRVDGVR+ +++ Sbjct: 79 GVRLQKVLAQAGVASRRHAEILIDQGRVEVNDRIVTTQGVRVDPNNDVIRVDGVRIHINE 138 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 L Y LNKPRGMHSTMSD+ GRPC+GDL+ K + LFHVGRLDADTEGL+LLTNDG Sbjct: 139 DLEYFVLNKPRGMHSTMSDELGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDG 198 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELA+RLMHP +EV KTYLATV G L LR G+ELEDGP + D ++D GK+L Sbjct: 199 ELANRLMHPKYEVSKTYLATVRGEATNKLVSALRDGVELEDGPAKADFAQIIDVFQGKSL 258 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 +R+ +HEGR IVRR+ +GFPV+ LVR + V LG+Q+PGS+RAL E+ LYK V Sbjct: 259 LRIEIHEGRKHIVRRLFDELGFPVERLVRTKLHTVQLGDQKPGSLRALNSSELTSLYKVV 318 Query: 252 GL 253 L Sbjct: 319 QL 320 >tr|C3PGG1|C3PGG1_CORA7 Tax_Id=548476 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium aurimucosum] Length = 305 Score = 293 bits (750), Expect = 1e-77 Identities = 149/245 (60%), Positives = 185/245 (75%) Query: 9 QERGIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVI 68 Q +G RLQKVL++AG+ASRR AE LI +GRVEV+GQV+ + GTRVDP+ +IRVDG R+ Sbjct: 61 QNQGERLQKVLAKAGVASRRHAEILIDEGRVEVNGQVIIKQGTRVDPNKDVIRVDGTRIN 120 Query: 69 LDDSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLT 128 +++ Y LNKPRGM STMSDD GRPC+GD++ +V + LFHVGRLDADTEGL+LLT Sbjct: 121 VNEETQYFVLNKPRGMQSTMSDDMGRPCVGDVVADRVVAGQRLFHVGRLDADTEGLLLLT 180 Query: 129 NDGELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPG 188 NDGELA+RLMHP +EV KTYLATV G + L ++LR GIELEDG + D +VD G Sbjct: 181 NDGELANRLMHPKYEVTKTYLATVLGEADKKLIRQLREGIELEDGLAQADYVQIVDKNQG 240 Query: 189 KTLVRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLY 248 +LVRV LHEGR IVRRML G+PVQ LVR + V LG+ +PGS+RAL +E+ LY Sbjct: 241 YSLVRVELHEGRKHIVRRMLKEAGYPVQRLVRTKLHTVQLGDMKPGSLRALNSNELTSLY 300 Query: 249 KAVGL 253 KAVG+ Sbjct: 301 KAVGM 305 >tr|A4QE19|A4QE19_CORGB Tax_Id=340322 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium glutamicum] Length = 320 Score = 293 bits (750), Expect = 1e-77 Identities = 144/242 (59%), Positives = 180/242 (74%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVL+QAG+ASRR AE LI GRVEV+ ++VT G RV+P+ +IRVDGVR+ +++ Sbjct: 79 GVRLQKVLAQAGVASRRHAEILIDQGRVEVNDRIVTTQGVRVNPNNDVIRVDGVRIHINE 138 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 L Y LNKPRGMHSTMSD+ GRPC+GDL+ K + LFHVGRLDADTEGL+LLTNDG Sbjct: 139 DLEYFVLNKPRGMHSTMSDELGRPCVGDLVSEKTASGQRLFHVGRLDADTEGLLLLTNDG 198 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELA+RLMHP +EV KTYLATV G L LR G+ELEDGP + D ++D GK+L Sbjct: 199 ELANRLMHPKYEVSKTYLATVRGEATNKLVSALRDGVELEDGPAKADFAQIIDVFQGKSL 258 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 +R+ +HEGR IVRR+ +GFPV+ LVR + V LG+Q+PGS+RAL E+ LYK V Sbjct: 259 LRIEIHEGRKHIVRRLFDELGFPVERLVRTKLHTVQLGDQKPGSLRALNSSELTSLYKVV 318 Query: 252 GL 253 L Sbjct: 319 QL 320 >tr|C4LIG2|C4LIG2_CORK4 Tax_Id=645127 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium kroppenstedtii] Length = 278 Score = 291 bits (746), Expect = 4e-77 Identities = 146/242 (60%), Positives = 182/242 (75%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 GIRLQKVL+ AG+ASRR +EKLI +GRVEV+G +VT G RVDPD +IRVDG RV++D+ Sbjct: 37 GIRLQKVLAAAGVASRRMSEKLIDEGRVEVNGDIVTRQGVRVDPDYDVIRVDGSRVVVDE 96 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 S+ Y ALNKPRG+ STM DD GRPC+GD++ KV + LFHVGRLDA T+GL+LLTNDG Sbjct: 97 SMQYFALNKPRGVQSTMHDDMGRPCVGDIVGEKVDAGQRLFHVGRLDAATQGLLLLTNDG 156 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELA+RL+HP + + KTYLATV G V + ++L GIEL+DG R D ++D G++L Sbjct: 157 ELANRLIHPKYGIKKTYLATVLGEVDKKDLRRLTQGIELDDGTARADDADIIDVWQGRSL 216 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 V+V LHEGR IVRRML A GFPVQ LVR I V LGEQ PG++RAL R E+ L+ AV Sbjct: 217 VKVVLHEGRKHIVRRMLKAAGFPVQELVRTKIHTVQLGEQTPGTLRALNRSELTSLFNAV 276 Query: 252 GL 253 + Sbjct: 277 DM 278 >tr|C5VBT2|C5VBT2_9CORY Tax_Id=553207 (rluB)RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium matruchotii ATCC 14266] Length = 285 Score = 291 bits (745), Expect = 5e-77 Identities = 147/240 (61%), Positives = 180/240 (75%) Query: 12 GIRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDD 71 G+RLQKVL+QAG+ASRR AE +I GRVEV+G VV + G RV+P +IRVDGVRV +++ Sbjct: 44 GVRLQKVLAQAGVASRRNAEIMIDSGRVEVNGAVVMQQGVRVNPKVDVIRVDGVRVNVNN 103 Query: 72 SLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDG 131 + Y LNKPRG+HSTMSDD GRPCIGDL+ ++ + LFHVGRLDADTEGLILLTNDG Sbjct: 104 NHQYFVLNKPRGIHSTMSDDLGRPCIGDLVSERISAGQGLFHVGRLDADTEGLILLTNDG 163 Query: 132 ELAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTL 191 ELA+RL HP +EV KTY+A V G R L L+ G+EL+DGP D +VD G++L Sbjct: 164 ELANRLSHPKYEVSKTYIAEVLGEADRSLVTTLKNGVELDDGPAAADYVQIVDVHQGRSL 223 Query: 192 VRVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 VRV LHEGR IVRRML A G+PVQ LVR + V LGEQ+PG++RAL +E+ LYKAV Sbjct: 224 VRVQLHEGRKHIVRRMLKAAGYPVQYLVRTKLHTVQLGEQKPGTIRALNDNELRSLYKAV 283 >tr|C0E3H3|C0E3H3_9CORY Tax_Id=566549 RecName: Full=Pseudouridine synthase; EC=5.4.99.-;[Corynebacterium matruchotii ATCC 33806] Length = 241 Score = 289 bits (740), Expect = 2e-76 Identities = 146/239 (61%), Positives = 180/239 (75%) Query: 13 IRLQKVLSQAGIASRRAAEKLIIDGRVEVDGQVVTELGTRVDPDTSLIRVDGVRVILDDS 72 +RLQKVL+QAG+ASRR AE +I GRVEV+G VV + G RV+P+ +IRVDGVRV ++++ Sbjct: 1 MRLQKVLAQAGVASRRNAEIMIDSGRVEVNGAVVMQQGVRVNPEVDVIRVDGVRVNVNNN 60 Query: 73 LVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKNLFHVGRLDADTEGLILLTNDGE 132 Y LNKPRG+HSTMSDD GRPCIGDL+ ++ + LFHVGRLDADTEGLILLTNDGE Sbjct: 61 HQYFVLNKPRGIHSTMSDDLGRPCIGDLVSERISAGQGLFHVGRLDADTEGLILLTNDGE 120 Query: 133 LAHRLMHPSHEVPKTYLATVAGTVPRGLGKKLRAGIELEDGPVRVDGFAVVDAIPGKTLV 192 LA+RL HP +EV KTY+A V G R L L+ G+EL+DGP D +VD G++LV Sbjct: 121 LANRLSHPKYEVSKTYIAEVLGEADRSLVTTLKNGVELDDGPAAADYVQIVDVHQGRSLV 180 Query: 193 RVTLHEGRNRIVRRMLAAVGFPVQALVRIDIGGVSLGEQRPGSVRALRRDEIGQLYKAV 251 RV LHEGR IVRRML A G+PVQ LVR + V LGEQ+PG++RAL +E+ LYKAV Sbjct: 181 RVQLHEGRKHIVRRMLKAAGYPVQYLVRTKLHTVQLGEQKPGTIRALNDNELRSLYKAV 239 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.321 0.141 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,815,546,611 Number of extensions: 77194919 Number of successful extensions: 207504 Number of sequences better than 10.0: 6449 Number of HSP's gapped: 200037 Number of HSP's successfully gapped: 6479 Length of query: 253 Length of database: 3,846,993,858 Length adjustment: 134 Effective length of query: 119 Effective length of database: 2,336,116,656 Effective search space: 277997882064 Effective search space used: 277997882064 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 79 (35.0 bits)