BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_2651
         (184 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HSS3|B2HSS3_MYCMM Tax_Id=216594 SubName: Full=Transcription...   323   5e-87
tr|A0PSP3|A0PSP3_MYCUA Tax_Id=362242 SubName: Full=Transcription...   322   2e-86
tr|Q7TZK2|Q7TZK2_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSC...   236   8e-61
tr|O33179|O33179_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE TRANSC...   236   8e-61
tr|C6DRA8|C6DRA8_MYCTK Tax_Id=478434 SubName: Full=Transcription...   236   8e-61
tr|C1AP52|C1AP52_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   236   8e-61
tr|A5U3E5|A5U3E5_MYCTA Tax_Id=419947 SubName: Full=Putative tran...   236   8e-61
tr|A1KJI7|A1KJI7_MYCBP Tax_Id=410289 SubName: Full=Possible tran...   236   8e-61
tr|A5WNA4|A5WNA4_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   236   8e-61
tr|A4KHT4|A4KHT4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   236   8e-61
tr|A2VIQ4|A2VIQ4_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   236   8e-61
tr|B2HSS5|B2HSS5_MYCMM Tax_Id=216594 SubName: Full=Transcription...   167   6e-40
tr|A0QQ97|A0QQ97_MYCS2 Tax_Id=246196 SubName: Full=Putative tran...   160   6e-38
tr|Q1B6F4|Q1B6F4_MYCSS Tax_Id=164756 SubName: Full=Transcription...   154   6e-36
tr|A1UIM2|A1UIM2_MYCSK Tax_Id=189918 SubName: Full=Transcription...   154   6e-36
tr|A4TA10|A4TA10_MYCGI Tax_Id=350054 SubName: Full=Transcription...   151   4e-35
tr|A1TBL2|A1TBL2_MYCVP Tax_Id=350058 SubName: Full=Transcription...   151   4e-35
tr|A3Q235|A3Q235_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   150   6e-35
tr|Q744Q6|Q744Q6_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   136   9e-31
tr|B5LU12|B5LU12_MYCPA Tax_Id=262316 SubName: Full=Probable regu...   135   3e-30
tr|A0Q8S3|A0Q8S3_MYCA1 Tax_Id=243243 SubName: Full=Transcription...   134   3e-30
tr|C3JEV1|C3JEV1_RHOER Tax_Id=596309 SubName: Full=Putative tran...   118   3e-25
tr|C0ZPE4|C0ZPE4_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR...   117   7e-25
tr|D0L830|D0L830_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr...   112   2e-23
tr|C1B3E4|C1B3E4_RHOOB Tax_Id=632772 SubName: Full=Putative unch...   111   4e-23
tr|B1MNX0|B1MNX0_MYCA9 Tax_Id=561007 SubName: Full=Putative tran...   110   7e-23
tr|D0L474|D0L474_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr...    74   7e-12
tr|C3JVS2|C3JVS2_RHOER Tax_Id=596309 SubName: Full=Transcription...    73   1e-11
tr|C0ZRV2|C0ZRV2_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR...    72   3e-11
tr|Q0S4N9|Q0S4N9_RHOSR Tax_Id=101510 SubName: Full=Possible tran...    72   4e-11
tr|Q73WZ1|Q73WZ1_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...    71   6e-11
tr|A0QCK7|A0QCK7_MYCA1 Tax_Id=243243 SubName: Full=Transcription...    71   6e-11
tr|C2AK74|C2AK74_TSUPA Tax_Id=521096 SubName: Full=Transcription...    71   6e-11
tr|B2HRG1|B2HRG1_MYCMM Tax_Id=216594 SubName: Full=Transcription...    69   2e-10
tr|A0PVT7|A0PVT7_MYCUA Tax_Id=362242 SubName: Full=Transcription...    69   2e-10
tr|C1AY35|C1AY35_RHOOB Tax_Id=632772 SubName: Full=Putative TetR...    69   3e-10
tr|A1TDJ1|A1TDJ1_MYCVP Tax_Id=350058 SubName: Full=Transcription...    65   3e-09
sp|Q11063|Y1255_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ...    62   3e-08
tr|C6DUB6|C6DUB6_MYCTK Tax_Id=478434 SubName: Full=Transcription...    62   3e-08
tr|A5U1V3|A5U1V3_MYCTA Tax_Id=419947 SubName: Full=Putative tran...    62   3e-08
tr|A0R2A1|A0R2A1_MYCS2 Tax_Id=246196 SubName: Full=Transcription...    62   3e-08
tr|A5WLT5|A5WLT5_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...    62   3e-08
tr|A4KGH7|A4KGH7_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...    62   3e-08
tr|A2VHF0|A2VHF0_MYCTU Tax_Id=348776 SubName: Full=Putative unch...    62   3e-08
tr|A4T8U6|A4T8U6_MYCGI Tax_Id=350054 SubName: Full=Transcription...    62   4e-08
tr|Q1B4W6|Q1B4W6_MYCSS Tax_Id=164756 SubName: Full=Transcription...    56   2e-06
tr|A3Q3M5|A3Q3M5_MYCSJ Tax_Id=164757 SubName: Full=Transcription...    56   2e-06
tr|A1UK71|A1UK71_MYCSK Tax_Id=189918 SubName: Full=Transcription...    56   2e-06
tr|Q5YRI6|Q5YRI6_NOCFA Tax_Id=37329 SubName: Full=Putative trans...    47   0.001
tr|A2VGV0|A2VGV0_MYCTU Tax_Id=348776 SubName: Full=Putative unch...    46   0.002

>tr|B2HSS3|B2HSS3_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium marinum]
          Length = 184

 Score =  323 bits (828), Expect = 5e-87
 Identities = 167/184 (90%), Positives = 168/184 (91%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +PNDDWLVGG                LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN
Sbjct: 1   MPNDDWLVGGDRRRAAADRIYDAATDLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
           DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ
Sbjct: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP
Sbjct: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180

Query: 181 VFAE 184
           VFAE
Sbjct: 181 VFAE 184


>tr|A0PSP3|A0PSP3_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium ulcerans]
          Length = 184

 Score =  322 bits (824), Expect = 2e-86
 Identities = 165/184 (89%), Positives = 168/184 (91%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +PNDDWLVGG                LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN
Sbjct: 1   MPNDDWLVGGDRRRAAADRIYDAATDLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
           DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ
Sbjct: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           EVAWLADSPLLAGVASDLTGLAGGDPHAA+WVVR+VLSLMYWPAESEDVERLMVEKFVAP
Sbjct: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAARWVVRVVLSLMYWPAESEDVERLMVEKFVAP 180

Query: 181 VFAE 184
           VFAE
Sbjct: 181 VFAE 184


>tr|Q7TZK2|Q7TZK2_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE
           TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis]
          Length = 186

 Score =  236 bits (602), Expect = 8e-61
 Identities = 117/184 (63%), Positives = 140/184 (76%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +P +DW+VGG                LI   G+N LDID+LA  VHCSRAT+YR  GGK 
Sbjct: 1   MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
            IR+VV+ RAAARIAD VRS VE L GRERVVAAI+LS+QRIR+DPLG+LM  SIHGG  
Sbjct: 61  QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           E+AWL +SPLLA  A++LTG+AGGDP  AKWVVR+VLSLMYWPAE+++ ER +VEK+VAP
Sbjct: 121 ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP 180

Query: 181 VFAE 184
            FAE
Sbjct: 181 AFAE 184


>tr|O33179|O33179_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE
           TRANSCRIPTIONAL REGULATORY PROTEIN; SubName:
           Full=Transcriptional regulator, TetR
           family;[Mycobacterium tuberculosis]
          Length = 186

 Score =  236 bits (602), Expect = 8e-61
 Identities = 117/184 (63%), Positives = 140/184 (76%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +P +DW+VGG                LI   G+N LDID+LA  VHCSRAT+YR  GGK 
Sbjct: 1   MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
            IR+VV+ RAAARIAD VRS VE L GRERVVAAI+LS+QRIR+DPLG+LM  SIHGG  
Sbjct: 61  QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           E+AWL +SPLLA  A++LTG+AGGDP  AKWVVR+VLSLMYWPAE+++ ER +VEK+VAP
Sbjct: 121 ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP 180

Query: 181 VFAE 184
            FAE
Sbjct: 181 AFAE 184


>tr|C6DRA8|C6DRA8_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis]
          Length = 186

 Score =  236 bits (602), Expect = 8e-61
 Identities = 117/184 (63%), Positives = 140/184 (76%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +P +DW+VGG                LI   G+N LDID+LA  VHCSRAT+YR  GGK 
Sbjct: 1   MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
            IR+VV+ RAAARIAD VRS VE L GRERVVAAI+LS+QRIR+DPLG+LM  SIHGG  
Sbjct: 61  QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           E+AWL +SPLLA  A++LTG+AGGDP  AKWVVR+VLSLMYWPAE+++ ER +VEK+VAP
Sbjct: 121 ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP 180

Query: 181 VFAE 184
            FAE
Sbjct: 181 AFAE 184


>tr|C1AP52|C1AP52_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 186

 Score =  236 bits (602), Expect = 8e-61
 Identities = 117/184 (63%), Positives = 140/184 (76%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +P +DW+VGG                LI   G+N LDID+LA  VHCSRAT+YR  GGK 
Sbjct: 1   MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
            IR+VV+ RAAARIAD VRS VE L GRERVVAAI+LS+QRIR+DPLG+LM  SIHGG  
Sbjct: 61  QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           E+AWL +SPLLA  A++LTG+AGGDP  AKWVVR+VLSLMYWPAE+++ ER +VEK+VAP
Sbjct: 121 ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP 180

Query: 181 VFAE 184
            FAE
Sbjct: 181 AFAE 184


>tr|A5U3E5|A5U3E5_MYCTA Tax_Id=419947 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 186

 Score =  236 bits (602), Expect = 8e-61
 Identities = 117/184 (63%), Positives = 140/184 (76%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +P +DW+VGG                LI   G+N LDID+LA  VHCSRAT+YR  GGK 
Sbjct: 1   MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
            IR+VV+ RAAARIAD VRS VE L GRERVVAAI+LS+QRIR+DPLG+LM  SIHGG  
Sbjct: 61  QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           E+AWL +SPLLA  A++LTG+AGGDP  AKWVVR+VLSLMYWPAE+++ ER +VEK+VAP
Sbjct: 121 ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP 180

Query: 181 VFAE 184
            FAE
Sbjct: 181 AFAE 184


>tr|A1KJI7|A1KJI7_MYCBP Tax_Id=410289 SubName: Full=Possible
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 186

 Score =  236 bits (602), Expect = 8e-61
 Identities = 117/184 (63%), Positives = 140/184 (76%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +P +DW+VGG                LI   G+N LDID+LA  VHCSRAT+YR  GGK 
Sbjct: 1   MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
            IR+VV+ RAAARIAD VRS VE L GRERVVAAI+LS+QRIR+DPLG+LM  SIHGG  
Sbjct: 61  QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           E+AWL +SPLLA  A++LTG+AGGDP  AKWVVR+VLSLMYWPAE+++ ER +VEK+VAP
Sbjct: 121 ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP 180

Query: 181 VFAE 184
            FAE
Sbjct: 181 AFAE 184


>tr|A5WNA4|A5WNA4_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 186

 Score =  236 bits (602), Expect = 8e-61
 Identities = 117/184 (63%), Positives = 140/184 (76%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +P +DW+VGG                LI   G+N LDID+LA  VHCSRAT+YR  GGK 
Sbjct: 1   MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
            IR+VV+ RAAARIAD VRS VE L GRERVVAAI+LS+QRIR+DPLG+LM  SIHGG  
Sbjct: 61  QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           E+AWL +SPLLA  A++LTG+AGGDP  AKWVVR+VLSLMYWPAE+++ ER +VEK+VAP
Sbjct: 121 ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP 180

Query: 181 VFAE 184
            FAE
Sbjct: 181 AFAE 184


>tr|A4KHT4|A4KHT4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 186

 Score =  236 bits (602), Expect = 8e-61
 Identities = 117/184 (63%), Positives = 140/184 (76%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +P +DW+VGG                LI   G+N LDID+LA  VHCSRAT+YR  GGK 
Sbjct: 1   MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
            IR+VV+ RAAARIAD VRS VE L GRERVVAAI+LS+QRIR+DPLG+LM  SIHGG  
Sbjct: 61  QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           E+AWL +SPLLA  A++LTG+AGGDP  AKWVVR+VLSLMYWPAE+++ ER +VEK+VAP
Sbjct: 121 ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP 180

Query: 181 VFAE 184
            FAE
Sbjct: 181 AFAE 184


>tr|A2VIQ4|A2VIQ4_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 186

 Score =  236 bits (602), Expect = 8e-61
 Identities = 117/184 (63%), Positives = 140/184 (76%)

Query: 1   VPNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKN 60
           +P +DW+VGG                LI   G+N LDID+LA  VHCSRAT+YR  GGK 
Sbjct: 1   MPGNDWIVGGNRRTIAAERIYAAATDLITRYGLNALDIDKLAREVHCSRATIYRRAGGKA 60

Query: 61  DIRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQ 120
            IR+VV+ RAAARIAD VRS VE L GRERVVAAI+LS+QRIR+DPLG+LM  SIHGG  
Sbjct: 61  QIRDVVLTRAAARIADGVRSDVETLRGRERVVAAILLSLQRIRSDPLGKLMFGSIHGGAG 120

Query: 121 EVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           E+AWL +SPLLA  A++LTG+AGGDP  AKWVVR+VLSLMYWPAE+++ ER +VEK+VAP
Sbjct: 121 ELAWLTESPLLADFATELTGIAGGDPQGAKWVVRVVLSLMYWPAENDEAERRLVEKYVAP 180

Query: 181 VFAE 184
            FAE
Sbjct: 181 AFAE 184


>tr|B2HSS5|B2HSS5_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium marinum]
          Length = 199

 Score =  167 bits (422), Expect = 6e-40
 Identities = 78/156 (50%), Positives = 109/156 (69%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           LIA +G++  DID+LA  VHCSRAT+YRY GGK  IR+VV+ RAAARI +SVR+  E+L+
Sbjct: 26  LIASDGLSAFDIDKLAARVHCSRATIYRYAGGKAKIRDVVIARAAARIVESVRAQAESLT 85

Query: 87  GRERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVAWLADSPLLAGVASDLTGLAGGDP 146
           G ERVVA++  ++  +R+DPLG+ ++ S         W   S L+A  A+DL G+ GGD 
Sbjct: 86  GAERVVASVEFALAGVRSDPLGRHLVGSFPKSANGAEWFVGSKLVANFAADLAGITGGDH 145

Query: 147 HAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPVF 182
            A  W+VR+VLSL+ WPAE  ++ER +V +F+ P F
Sbjct: 146 QAGGWLVRVVLSLILWPAEDAEIERQLVHRFIGPAF 181


>tr|A0QQ97|A0QQ97_MYCS2 Tax_Id=246196 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium
           smegmatis]
          Length = 178

 Score =  160 bits (405), Expect = 6e-38
 Identities = 84/178 (47%), Positives = 116/178 (65%), Gaps = 3/178 (1%)

Query: 5   DWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRN 64
           DWL+GG                L+  +G++  DID LA  VHCSRATVYRY GGK  IR+
Sbjct: 3   DWLLGGDRRTAAAERIYAAATELVLRDGLDAFDIDTLAARVHCSRATVYRYAGGKAQIRD 62

Query: 65  VVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVAW 124
            V+ R AA I DSVR AV +LSGRERVV A+ ++++ IR+DP+ Q+M+    G  ++++ 
Sbjct: 63  AVLLRLAASIVDSVRQAVGHLSGRERVVRAVTVALEHIRSDPIRQMMVGL--GAGRDLSE 120

Query: 125 LADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPVF 182
           L  SP+LA +A++LTG+   DP AA+W+VR+V+SL  WP      E  +VE+FVAP F
Sbjct: 121 LPASPVLADLAAELTGVT-DDPQAAQWIVRVVMSLAVWPIGDAAAEAGLVERFVAPAF 177


>tr|Q1B6F4|Q1B6F4_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 186

 Score =  154 bits (388), Expect = 6e-36
 Identities = 77/180 (42%), Positives = 114/180 (63%), Gaps = 2/180 (1%)

Query: 4   DDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIR 63
           DDW+VGG                ++  EG++ LDID LA  +HCSRAT+YRY GGK  IR
Sbjct: 4   DDWVVGGDRRDAAAERIYASAVDVVVTEGLDALDIDALAKRLHCSRATIYRYAGGKAQIR 63

Query: 64  NVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVA 123
           + V+ R AA + D+VR AV + SG +RVV AI +++  +R+DP+ +L++ +      E+ 
Sbjct: 64  DAVLMRLAAGVIDTVRRAVADRSGADRVVTAITVALGELRSDPMRKLLMGA--PNAPELG 121

Query: 124 WLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPVFA 183
            L  SP+L  +A+DL+G+ G DP AA+W+VR+V+SL YWP      E  ++ +FVAP F+
Sbjct: 122 ALHSSPVLGQLAADLSGITGDDPLAAQWIVRVVVSLAYWPDPDPRQEEQLLRRFVAPAFS 181


>tr|A1UIM2|A1UIM2_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 186

 Score =  154 bits (388), Expect = 6e-36
 Identities = 77/180 (42%), Positives = 114/180 (63%), Gaps = 2/180 (1%)

Query: 4   DDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIR 63
           DDW+VGG                ++  EG++ LDID LA  +HCSRAT+YRY GGK  IR
Sbjct: 4   DDWVVGGDRRDAAAERIYASAVDVVVTEGLDALDIDALAKRLHCSRATIYRYAGGKAQIR 63

Query: 64  NVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVA 123
           + V+ R AA + D+VR AV + SG +RVV AI +++  +R+DP+ +L++ +      E+ 
Sbjct: 64  DAVLMRLAAGVIDTVRRAVADRSGADRVVTAITVALGELRSDPMRKLLMGA--PNAPELG 121

Query: 124 WLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPVFA 183
            L  SP+L  +A+DL+G+ G DP AA+W+VR+V+SL YWP      E  ++ +FVAP F+
Sbjct: 122 ALHSSPVLGQLAADLSGITGDDPLAAQWIVRVVVSLAYWPDPDPRQEEQLLRRFVAPAFS 181


>tr|A4TA10|A4TA10_MYCGI Tax_Id=350054 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium gilvum]
          Length = 197

 Score =  151 bits (381), Expect = 4e-35
 Identities = 75/179 (41%), Positives = 110/179 (61%), Gaps = 2/179 (1%)

Query: 5   DWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRN 64
           DWL+G                 L+A  G +   ID LA  VHCS AT+YR+VGGK+ IR+
Sbjct: 15  DWLIGRDRRSEGAERIYVAAADLMARRGYDGFGIDALAAAVHCSPATIYRHVGGKSAIRD 74

Query: 65  VVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVAW 124
           VV++R A  + DSVR A+  L G ER+V A ++++QR+RA PL ++M S    G     W
Sbjct: 75  VVLERQAEHVLDSVRQAIAGLEGSERIVTATLVALQRMRAAPLAEVMRSM--PGPPGTGW 132

Query: 125 LADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPVFA 183
           L DSP++A +A+++ G A  DP AA+W++R+ L+L YWP   E+ E+  V +F+ P +A
Sbjct: 133 LIDSPVVARLAAEMVGTADADPLAAQWLIRVFLALWYWPMHDEEAEKAAVLRFLGPPYA 191


>tr|A1TBL2|A1TBL2_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium vanbaalenii]
          Length = 178

 Score =  151 bits (381), Expect = 4e-35
 Identities = 76/175 (43%), Positives = 112/175 (64%), Gaps = 3/175 (1%)

Query: 4   DDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIR 63
           DDWLVG                 LI  +G++  D+  L   VHCSRAT+YR+VGGK  IR
Sbjct: 3   DDWLVGDRRAEAADRIFSAATD-LIVRDGLDGFDMAALQAAVHCSRATIYRHVGGKAQIR 61

Query: 64  NVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVA 123
             V+ R A RI  +VRSAV  LSG ER V A++++++RIRADP+GQ ++S++     E+ 
Sbjct: 62  EAVLLRQAERIIATVRSAVVGLSGAERTVTAVVVALERIRADPIGQTLLSAMR--KDELT 119

Query: 124 WLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFV 178
           W+  S +   +A++LTG+   DP AA+W+VR+VL+L++WP E    ER M+++F+
Sbjct: 120 WIGRSAVPPALAAELTGIDDDDPQAAQWIVRVVLALLFWPVEDPAAEREMLQRFL 174


>tr|A3Q235|A3Q235_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 186

 Score =  150 bits (379), Expect = 6e-35
 Identities = 76/179 (42%), Positives = 112/179 (62%), Gaps = 2/179 (1%)

Query: 4   DDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIR 63
           DDW+VGG                ++  EG++ LDID LA  +HCSRAT+YRY GGK  IR
Sbjct: 4   DDWVVGGDRRDAAAERIYASAVDVVVTEGLDALDIDALAKRLHCSRATIYRYAGGKAQIR 63

Query: 64  NVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVA 123
           + V+ R AA + D+VR AV + SG +RVV AI +++  +R+DP+ +L++ +      E+ 
Sbjct: 64  DAVLMRLAAGVIDTVRRAVADRSGADRVVTAITVALGELRSDPMRKLLMGA--PNAPELG 121

Query: 124 WLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPVF 182
            L  SP+L  +A+DL+G+   DP AA+W+VR+V+SL YWP      E  ++ +FVAP F
Sbjct: 122 ALHSSPVLGQLAADLSGITEDDPLAAQWIVRVVVSLAYWPDPDPRQEEQLLRRFVAPAF 180


>tr|Q744Q6|Q744Q6_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 192

 Score =  136 bits (343), Expect = 9e-31
 Identities = 73/175 (41%), Positives = 104/175 (59%), Gaps = 2/175 (1%)

Query: 4   DDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIR 63
           DDWLVG                 LIA  G +   I+ LA  VHCS AT+YR+ GGK  IR
Sbjct: 4   DDWLVGRDRRSAAAERIYAAAADLIARRGYDGFTIEALAARVHCSPATIYRHAGGKATIR 63

Query: 64  NVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVA 123
           + VV   AARI D+ R A+++L G ERVV A I++++R+R+DPL QLM  SIH       
Sbjct: 64  DAVVGIQAARIVDTTREAIKDLRGPERVVTATIMALERLRSDPLAQLM-RSIHAAPVS-D 121

Query: 124 WLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFV 178
           W+ +SP +  +A+++ G    DP AA+W++R+ L+L  WP +    ER +V +F+
Sbjct: 122 WVINSPTVTALAAEMLGPGHDDPLAAQWLIRVFLALWGWPLKDPAAERALVHRFL 176


>tr|B5LU12|B5LU12_MYCPA Tax_Id=262316 SubName: Full=Probable
           regulatory protein;[Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 207

 Score =  135 bits (339), Expect = 3e-30
 Identities = 72/181 (39%), Positives = 105/181 (58%), Gaps = 2/181 (1%)

Query: 4   DDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIR 63
           DDWLVG                 LIA  G +   I+ LA  VHC  AT+YR+ GGK  IR
Sbjct: 4   DDWLVGRDRRSAAAERIYAAAADLIARRGYDGFTIEALAARVHCPPATIYRHAGGKATIR 63

Query: 64  NVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVA 123
           + VV   AARI D+ R A+++L G ERVV A I++++R+R+DPL QLM  SIH       
Sbjct: 64  DAVVGIQAARIVDTTREAIKDLRGPERVVTATIMALERLRSDPLAQLM-RSIHAAPVS-D 121

Query: 124 WLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPVFA 183
           W+ +SP +  +A+++ G    DP AA+W++R+ L+L  WP +    ER +V +F+   + 
Sbjct: 122 WVINSPTVTALAAEMLGPGHDDPLAAQWLIRVFLALWGWPLKDPAAERALVHRFLGASYR 181

Query: 184 E 184
           +
Sbjct: 182 Q 182


>tr|A0Q8S3|A0Q8S3_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator, TetR family protein;[Mycobacterium avium]
          Length = 192

 Score =  134 bits (338), Expect = 3e-30
 Identities = 72/175 (41%), Positives = 104/175 (59%), Gaps = 2/175 (1%)

Query: 4   DDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIR 63
           DDWLVG                 LIA  G +   I+ LA  VHCS AT+YR+ GGK  IR
Sbjct: 4   DDWLVGRDRRSAAAERIYAAAADLIARRGYDGFTIEALAARVHCSPATIYRHAGGKATIR 63

Query: 64  NVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVA 123
           + VV   AARI D+ R A+++L G ERVV A I++++R+R+DPL QLM  SIH       
Sbjct: 64  DAVVGIQAARIVDTTREAIKDLRGPERVVTATIMALERLRSDPLAQLM-RSIHAAPVS-D 121

Query: 124 WLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFV 178
           W+ +SP +  +A+++ G    +P AA+W++R+ L+L  WP +    ER +V +F+
Sbjct: 122 WVINSPTVTALAAEMLGPGHDNPLAAQWLIRVFLALWGWPLKDPAAERALVHRFL 176


>tr|C3JEV1|C3JEV1_RHOER Tax_Id=596309 SubName: Full=Putative
           transcriptional regulatory protein;[Rhodococcus
           erythropolis SK121]
          Length = 184

 Score =  118 bits (296), Expect = 3e-25
 Identities = 72/178 (40%), Positives = 100/178 (56%), Gaps = 8/178 (4%)

Query: 5   DWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRN 64
           DWL GG                LI  +G ++ + D +A    CSRAT+YRYVGGK+ IR 
Sbjct: 11  DWLAGGNRSELATERIFAAAAELIREQGFDRFNADDVAARAGCSRATLYRYVGGKSAIRE 70

Query: 65  VVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRAD-PLGQLMISSIHGGTQEVA 123
            ++ R AA +A  V +AVE+L G ER+V +I+++V  IR+D  +   + ++   G  E  
Sbjct: 71  GLLSRGAASVASQVATAVESLHGDERIVESILVAVDAIRSDAAMSHGLAAARANGIDE-- 128

Query: 124 WLADSPLLAGVASDLTGLAGGDPHA--AKWVVRIVLSLMYWPAESEDVERLMVEKFVA 179
           +L  SPLL   A +L GL   DP    ++WVVRIVL L+ WP      ER MVE FV+
Sbjct: 129 YLVSSPLLPRTALELAGL---DPEGQESQWVVRIVLMLLAWPLADRAAERRMVESFVS 183


>tr|C0ZPE4|C0ZPE4_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus
           erythropolis]
          Length = 181

 Score =  117 bits (292), Expect = 7e-25
 Identities = 73/178 (41%), Positives = 99/178 (55%), Gaps = 8/178 (4%)

Query: 5   DWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRN 64
           DWL GG                LI  +G  +   D +A+   CSRAT+YRYVGGK+ IR 
Sbjct: 8   DWLAGGNRRELATERIFAAAAELIREQGFVRFSADDVASRAGCSRATLYRYVGGKSAIRE 67

Query: 65  VVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRAD-PLGQLMISSIHGGTQEVA 123
            ++ R AA +A  V +AVE+L G ER+V +I+++V  IRAD  +   + ++   G  E  
Sbjct: 68  GLLSRGAASVASQVAAAVESLRGDERIVESILVAVDAIRADAAMSHGLAAARANGIDE-- 125

Query: 124 WLADSPLLAGVASDLTGLAGGDPHA--AKWVVRIVLSLMYWPAESEDVERLMVEKFVA 179
           +L  SPLL   A +L GL   DP    ++WVVRIVL L+ WP      ER MVE FV+
Sbjct: 126 YLVSSPLLPRTALELAGL---DPEGQQSQWVVRIVLMLLAWPLADRADERRMVESFVS 180


>tr|D0L830|D0L830_GORB4 Tax_Id=526226 SubName: Full=Regulatory
           protein TetR;[Gordonia bronchialis]
          Length = 182

 Score =  112 bits (280), Expect = 2e-23
 Identities = 70/179 (39%), Positives = 99/179 (55%), Gaps = 5/179 (2%)

Query: 5   DWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRN 64
           DWLVGG                ++A  GI++ +I+ LA   HCSRATVYR+VGGK  I  
Sbjct: 4   DWLVGGVRADSARNRLLDVAATIVAQRGIDRFEINDLAARAHCSRATVYRHVGGKQAIVE 63

Query: 65  VVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISS--IHGGTQEV 122
            V+  A+  I D+VR AV +L G ER   AI ++++ IRADP+    I S     GT+ V
Sbjct: 64  TVLGVASVHIVDTVREAVVSLHGPERAQVAIEVALREIRADPVTSQFIRSGRFLEGTRLV 123

Query: 123 AWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
                SP++A +A++L  L   D   A   VR VL+L+ WPA + ++E  M+E+    V
Sbjct: 124 ---LHSPVVARIAAELIDLDPTDNVPAALAVRSVLALLIWPASTPELEIQMIEELAVAV 179


>tr|C1B3E4|C1B3E4_RHOOB Tax_Id=632772 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus opacus]
          Length = 151

 Score =  111 bits (277), Expect = 4e-23
 Identities = 61/147 (41%), Positives = 91/147 (61%), Gaps = 2/147 (1%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLSGRERVVAAI 95
           +D+DR+A    CSRAT+YRYVGGK  +   V+ RAA  +A+ + +A++     ER+V AI
Sbjct: 1   MDVDRVAARAGCSRATLYRYVGGKRALVEAVMSRAADAVAERIEAALQPFENAERIVEAI 60

Query: 96  ILSVQRIRADPLGQLMISSIHGGTQEVAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRI 155
           + ++  IRA+P     ++  H  + +  +LA +P L  VA  LT +A  D  AA W+VR+
Sbjct: 61  LAALVEIRAEPTLVRWLAGAHPRSTD-EYLARAPELGRVAISLTRIA-PDEEAAGWMVRV 118

Query: 156 VLSLMYWPAESEDVERLMVEKFVAPVF 182
           VL+L+ WP      ER +VE+FV PVF
Sbjct: 119 VLALLTWPLPDPAAERHIVERFVEPVF 145


>tr|B1MNX0|B1MNX0_MYCA9 Tax_Id=561007 SubName: Full=Putative
           transcriptional regulator, TetR family;[Mycobacterium
           abscessus]
          Length = 214

 Score =  110 bits (275), Expect = 7e-23
 Identities = 66/183 (36%), Positives = 99/183 (54%), Gaps = 3/183 (1%)

Query: 2   PNDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKND 61
           P  DWL G                  IA  G+++L++D +A    CSRATVYR+VGGK  
Sbjct: 3   PYADWLHGSDRHTIAADRIVSVAAKQIARHGLDRLNLDAVAREAGCSRATVYRHVGGKTA 62

Query: 62  IRNVVVKRAAARIADSVRSAVENLSGRERVVAAIILSVQRIRADPLGQLMISSIHGGTQE 121
           I + V+ R  A++   ++ AV++   R R V AI  S+  IR DP+   MI+++   T  
Sbjct: 63  IVDAVLARNIAKVTADIQRAVQSADARRRAVVAITASLTAIRHDPVISTMIATM-SPTSL 121

Query: 122 VAWLADSPLLAGVASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
            ++L  S  +   AS  TGLA  D  AA+W+ R+V++L++WP      E  M+E+FV PV
Sbjct: 122 GSYLNASSEIPRSASAFTGLA--DETAAQWISRVVMALLFWPTSDPAQESEMIERFVYPV 179

Query: 182 FAE 184
             +
Sbjct: 180 LKD 182


>tr|D0L474|D0L474_GORB4 Tax_Id=526226 SubName: Full=Regulatory
           protein TetR;[Gordonia bronchialis]
          Length = 192

 Score = 73.9 bits (180), Expect = 7e-12
 Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 10/163 (6%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           L    G++ + +  +A  V CSRAT+YRY  GK ++    V RAA  +A+ +      ++
Sbjct: 26  LFTARGVSSVTMRDVAQAVGCSRATLYRYFPGKTELLAAYVDRAAGELAEEIARGTRTVA 85

Query: 87  G-RERVVAAIILSVQRIRADP-LGQLMISSIHGGTQEVAWLADSPLLAGVA-SDLTGLAG 143
              ER+VAA+  ++  +R +P L         G    +A +  SP +  +A S L G+A 
Sbjct: 86  DPAERLVAAVRTALDGVRGNPALAAWFTPETAGPATHLALV--SPAIESIATSFLGGVAP 143

Query: 144 GDPHA-----AKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
                     A+W+VR+++SL+  PA S D E  ++ +FV PV
Sbjct: 144 ASDETDRTERARWLVRVIVSLLSDPAGSPDAEADLLRRFVVPV 186


>tr|C3JVS2|C3JVS2_RHOER Tax_Id=596309 SubName: Full=Transcriptional
           regulator, TetR family protein;[Rhodococcus erythropolis
           SK121]
          Length = 187

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 6/179 (3%)

Query: 3   NDDWLVGGXXXXXXXXXXXXXXXXLIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDI 62
           ++DWL  G                 +A +G+N + +  +A+   CSRAT+YRY   +  +
Sbjct: 2   SNDWLGEGRALAAAEKILDSAAQLFVA-KGVNAVGMAEIASAAGCSRATLYRYFENRQAL 60

Query: 63  RNVVVKRAAARIADSVRSAVENLSG-RERVVAAIILSVQRIRADPLGQLMISSIHGGTQE 121
               V R A R+  S+  +V  +    ER+  AI+ +V  +R+ P   L      G    
Sbjct: 61  HIAFVHREARRLGTSIAESVATIDDPSERLETAILTAVSAVRSTP--TLAAWFTPGDASL 118

Query: 122 VAWLAD-SPLLAGVASDLTG-LAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFV 178
              LA+ S ++ G+   + G L  G    A+W+VR++LSL+  P   E+ ER +V +FV
Sbjct: 119 AGELANSSDVINGLGVAMLGELGAGTASRARWIVRVILSLLMVPGADENDERTLVREFV 177


>tr|C0ZRV2|C0ZRV2_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus
           erythropolis]
          Length = 187

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 5/156 (3%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           L   +G+N + +  +A+   CSRAT+YRY   +  +    V R A R+  ++  +V  + 
Sbjct: 25  LFVEKGVNAVGMAEIASAAGCSRATLYRYFENRQALHIAFVHREARRLGTAIAESVATID 84

Query: 87  G-RERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVAWLAD-SPLLAGVASDLTG-LAG 143
              ER+  A++ +V  +R+ P   L      G       LA+ S ++ G+   + G +  
Sbjct: 85  DPSERLETAMLTAVSAVRSTP--TLAAWFTPGDASLAGELANSSDVINGLGVAMLGEIGA 142

Query: 144 GDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVA 179
           G    A+W+VR++LSL+  P   E+ ER +V +FVA
Sbjct: 143 GTASRARWIVRVILSLLMVPGADENDERTLVREFVA 178


>tr|Q0S4N9|Q0S4N9_RHOSR Tax_Id=101510 SubName: Full=Possible
           transcriptional regulator;[Rhodococcus sp.]
          Length = 192

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 8/164 (4%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           L    GI  + +  +A    CSRAT+YRY   +  ++   V R A RI   V   V    
Sbjct: 25  LYVENGIAAVGMAEVARAAGCSRATLYRYFDSRQSLQLAFVHREARRIGALVAEEVSAAG 84

Query: 87  G-RERVVAAIILSVQRIRADP-LGQLMISSIHGGTQEVAWLADSPLLAGVASDLTGLAGG 144
             ++ +V A++ +++ +RADP L         G   ++A  +D  ++  + S   G AG 
Sbjct: 85  DPKDVIVEAMLAAIRLVRADPTLAAWFQLGDSGLAAQIAHSSD--VIESLGSAFLGQAGF 142

Query: 145 D----PHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPVFAE 184
                   A+W+VRI++SL+  P   +  ER M+E+FVAP  AE
Sbjct: 143 SGEETSRKARWLVRIIVSLLTVPGVDDTDERTMLEQFVAPALAE 186


>tr|Q73WZ1|Q73WZ1_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 197

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 13/155 (8%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLSG-RERVVAA 94
           + ++ +A    CSRAT+YRY   +  +R   V R A R+  ++   ++ +   R+R+ A+
Sbjct: 39  IGMNEIARAAGCSRATLYRYFENREALRTAYVHREANRLGRAIMEQIDGIDEPRQRLTAS 98

Query: 95  IILSVQRIRADPLGQLMISSIHGGTQE--VAWLAD-SPLLAGVASDLTGLAGGDPHA--- 148
           I  +++ +R +P     ++S    T+      LA+ S ++  +A+   G  G +  A   
Sbjct: 99  ITTTLRMVRGNPA----LASWFAVTRPPIAGELAEHSEVITALAAAFVGSLGPEEPAVVE 154

Query: 149 --AKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
             A+WVVR++ SL+ +P   E  ER M+E+FV P+
Sbjct: 155 RRARWVVRVITSLLLFPGHDEADERAMIEEFVVPI 189


>tr|A0QCK7|A0QCK7_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator, TetR family protein;[Mycobacterium avium]
          Length = 197

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 13/155 (8%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLSG-RERVVAA 94
           + ++ +A    CSRAT+YRY   +  +R   V R A R+  ++   ++ +   R+R+ A+
Sbjct: 39  IGMNEIARAAGCSRATLYRYFENREALRTAYVHREANRLGRAIMEQIDGIDEPRQRLTAS 98

Query: 95  IILSVQRIRADPLGQLMISSIHGGTQE--VAWLAD-SPLLAGVASDLTGLAGGDPHA--- 148
           I  +++ +R +P     ++S    T+      LA+ S ++  +A+   G  G +  A   
Sbjct: 99  ITTTLRMVRGNPA----LASWFAVTRPPIAGELAEHSEVITALAAAFVGSLGPEEPAVVE 154

Query: 149 --AKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
             A+WVVR++ SL+ +P   E  ER M+E+FV P+
Sbjct: 155 RRARWVVRVITSLLLFPGHDEADERAMIEEFVVPI 189


>tr|C2AK74|C2AK74_TSUPA Tax_Id=521096 SubName: Full=Transcriptional
           regulator, COG1309;[Tsukamurella paurometabola DSM
           20162]
          Length = 194

 Score = 70.9 bits (172), Expect = 6e-11
 Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 31/172 (18%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           L A +G+  + +  LA    CSRAT+YRY   +  +    ++R A  +A +VR     ++
Sbjct: 22  LFARDGVAAVGMAELAQAAGCSRATLYRYFPNRQALHAAFIQREARAVAVAVRDRTSGIA 81

Query: 87  G-RERVVAAIILSVQRIRADPLGQLMISSIHGGTQEVAWLA-DSPLLAGVASD------- 137
              ER++ A+ ++V+ +R             G     AW A D P   G+AS        
Sbjct: 82  DPGERLLRALQIAVEEVR-------------GAPPLAAWFAVDEPPAGGIASRSAGIEAV 128

Query: 138 ----LTGLAGGD-----PHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
               LT + G D     P AA+W+VR+V+SL+  P      E  ++ +FV P
Sbjct: 129 AFGLLTEITGADAPESAPAAARWLVRVVVSLLSHPEPDASAEEELLRRFVIP 180


>tr|B2HRG1|B2HRG1_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium marinum]
          Length = 193

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 13/155 (8%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLSG-RERVVAA 94
           + ++ +A    CSRAT+YRY   +  +R   V R   R+   +   + ++   R++++ +
Sbjct: 35  IGMNEIARAAGCSRATLYRYFESREALRTAYVHRETLRLGREIMQQIGDIDDPRDQLITS 94

Query: 95  IILSVQRIRADPLGQLMISSIH---GGTQEVAWLADSPLLAGVASDLTGLAGGDPHAA-- 149
           I  +++ +R  P      +S     GG  E+A    S ++AG+A+      G +  AA  
Sbjct: 95  ITATLRMVRQRPALAAWFASTRPPIGG--ELA--GQSEVIAGLAAAFLQSLGPEAPAAVE 150

Query: 150 ---KWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
              +W VR+++SL+ +P + E  ER M+E+FVAPV
Sbjct: 151 RRARWTVRVIVSLLMFPGQDEADERAMLEEFVAPV 185


>tr|A0PVT7|A0PVT7_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium ulcerans]
          Length = 193

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 13/155 (8%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLSG-RERVVAA 94
           + ++ +A    CSRAT+YRY   +  +R   V R   R+   +   + ++   R++++ +
Sbjct: 35  IGMNEIARAAGCSRATLYRYFESREALRTAYVHRETLRLGREIMQQIGDIDDPRDQLITS 94

Query: 95  IILSVQRIRADPLGQLMISSIH---GGTQEVAWLADSPLLAGVASDLTGLAGGDPHAA-- 149
           I  +++ +R  P      +S     GG  E+A    S ++AG+A+      G +  AA  
Sbjct: 95  ITATLRMVRQRPALAAWFASTRPPIGG--ELA--GQSEVIAGLAAAFLQSLGPEAPAAVE 150

Query: 150 ---KWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
              +W VR+++SL+ +P + E  ER M+E+FVAPV
Sbjct: 151 RRARWTVRVIVSLLMFPGQDEADERAMLEEFVAPV 185


>tr|C1AY35|C1AY35_RHOOB Tax_Id=632772 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 197

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 8/163 (4%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           L    GI  + +  +A    CSRAT+YRY   +  ++   V R A RI   V   V    
Sbjct: 25  LYVENGIAAVGMADVARAAGCSRATLYRYFDSRQALQLAFVHREARRIGALVAEEVSGTG 84

Query: 87  GRERVVA-AIILSVQRIRADP-LGQLMISSIHGGTQEVAWLADSPLLAGVASDLTGLAG- 143
           G + V+  A++ +++ +RADP L         G   ++A    S ++  + +   G AG 
Sbjct: 85  GPKGVIVDAMLTAIRLVRADPTLAAWFQLGDSGLAAQIA--HSSEVIESLGAAFLGRAGF 142

Query: 144 ---GDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPVFA 183
                   A+W+VRI++SL+  P   +  ER M+E+FVAP  A
Sbjct: 143 TGEESSRRARWLVRIIVSLLTVPGVDDADERAMLEQFVAPALA 185


>tr|A1TDJ1|A1TDJ1_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium vanbaalenii]
          Length = 193

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 13/163 (7%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           L A +    + +  +A+   CSRAT+YRY   +  +    V R A R+   +   + +++
Sbjct: 25  LFAAQPAATVGMHEIASAAGCSRATLYRYFENREALYTAYVHREAYRLYVEMTDQITSIA 84

Query: 87  G-RERVVAAIILSVQRIRADPLGQLMISSIHGGTQE---VAWLADSPLLAGVASDLTGLA 142
             RER++  ++ S++ +R  P     ++S    TQ         +S ++  +        
Sbjct: 85  DPRERLIEGMLASLRNVRESPA----LASWFATTQRPIGAEMAEESEVIKALTEAFVISL 140

Query: 143 GGDP-----HAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAP 180
           G D      H A+W+VR++ SLM +P   E  ER M+E+FV P
Sbjct: 141 GPDDAELVAHRARWLVRVMTSLMLFPGHDETDERAMLEEFVVP 183


>sp|Q11063|Y1255_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized
           HTH-type transcriptional regulator
           Rv1255c/MT1294;[Mycobacterium tuberculosis]
          Length = 202

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENL-SGRERVVAA 94
           + ++ +A    CSRAT+YRY   +  +R   V R   R+   +   + ++    ER++ +
Sbjct: 35  IGMNEIAKAAGCSRATLYRYFDSREALRTAYVHRETRRLGREIMVKIADVVEPAERLLVS 94

Query: 95  IILSVQRIRADPLGQLMISSIH---GGTQEVAWLADSPLLAGVASDLTGLAGGDP----H 147
           I  +++ +R +P      ++     GG  E+A  ++  + A  A+ L  L   DP     
Sbjct: 95  ITTTLRMVRDNPALAAWFTTTRPPIGG--EMAGRSEV-IAALAAAFLNSLGPDDPTTVER 151

Query: 148 AAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
            A+WVVR++ SL+ +P   E  ER M+ +FV P+
Sbjct: 152 RARWVVRMLTSLLMFPGRDEADERAMIAEFVVPI 185


>tr|C6DUB6|C6DUB6_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis]
          Length = 202

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENL-SGRERVVAA 94
           + ++ +A    CSRAT+YRY   +  +R   V R   R+   +   + ++    ER++ +
Sbjct: 35  IGMNEIAKAAGCSRATLYRYFDSREALRTAYVHRETRRLGREIMVKIADVVEPAERLLVS 94

Query: 95  IILSVQRIRADPLGQLMISSIH---GGTQEVAWLADSPLLAGVASDLTGLAGGDP----H 147
           I  +++ +R +P      ++     GG  E+A  ++  + A  A+ L  L   DP     
Sbjct: 95  ITTTLRMVRDNPALAAWFTTTRPPVGG--EMAGRSEV-IAALAAAFLNSLGPDDPTTVER 151

Query: 148 AAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
            A+WVVR++ SL+ +P   E  ER M+ +FV P+
Sbjct: 152 RARWVVRMLTSLLMFPGRDEADERAMIAEFVVPI 185


>tr|A5U1V3|A5U1V3_MYCTA Tax_Id=419947 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 202

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENL-SGRERVVAA 94
           + ++ +A    CSRAT+YRY   +  +R   V R   R+   +   + ++    ER++ +
Sbjct: 35  IGMNEIAKAAGCSRATLYRYFDSREALRTAYVHRETRRLGREIMVKIADVVEPAERLLVS 94

Query: 95  IILSVQRIRADPLGQLMISSIH---GGTQEVAWLADSPLLAGVASDLTGLAGGDP----H 147
           I  +++ +R +P      ++     GG  E+A  ++  + A  A+ L  L   DP     
Sbjct: 95  ITTTLRMVRDNPALAAWFTTTRPPIGG--EMAGRSEV-IAALAAAFLNSLGPDDPTTVER 151

Query: 148 AAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
            A+WVVR++ SL+ +P   E  ER M+ +FV P+
Sbjct: 152 RARWVVRMLTSLLMFPGRDEADERAMIAEFVVPI 185


>tr|A0R2A1|A0R2A1_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulator, TetR family protein;[Mycobacterium smegmatis]
          Length = 195

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 17/168 (10%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           L A +    + +  +A    CSRAT+YRY   ++ +    V R A R+   V   V  + 
Sbjct: 24  LFARKDAATVGMHEIAAAAGCSRATLYRYFENRDALYTAYVHREARRVYQEVSDQVVGIG 83

Query: 87  G-RERVVAAIILSVQRIRADPLGQLMISSIHGGTQ-----EVAWLAD--SPLLAGVASDL 138
              ER++  +I +++ +R  P     +SS    TQ     E+A  ++    L+ G    L
Sbjct: 84  DPAERLMEGVITALRAVRCSPA----LSSWFAATQRPIGGEMAEHSEVIRALVEGFVRSL 139

Query: 139 TGLAGGDPHAA-----KWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
                 D  AA     +W+VR+++SL+ +P   E  ER M+  FVAP+
Sbjct: 140 GSPTDADDDAAVGRRARWLVRVMVSLLVFPGVDEADERTMLADFVAPL 187


>tr|A5WLT5|A5WLT5_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 202

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENL-SGRERVVAA 94
           + ++ +A    CSRAT+YRY   +  +R   V R   R+   +   + ++    ER++ +
Sbjct: 35  IGMNEIAKAAGCSRATLYRYFDSREALRTAYVHRETRRLGREIMVKIADVVEPAERLLVS 94

Query: 95  IILSVQRIRADPLGQLMISSIH---GGTQEVAWLADSPLLAGVASDLTGLAGGDP----H 147
           I  +++ +R +P      ++     GG  E+A  ++  + A  A+ L  L   DP     
Sbjct: 95  ITTTLRMVRDNPALAAWFTTTRPPIGG--EMAGRSEV-IAALAAAFLNSLGPDDPTTVER 151

Query: 148 AAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
            A+WVVR++ SL+ +P   E  ER M+ +FV P+
Sbjct: 152 RARWVVRMLTSLLMFPGRDEADERAMIAEFVVPI 185


>tr|A4KGH7|A4KGH7_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 202

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENL-SGRERVVAA 94
           + ++ +A    CSRAT+YRY   +  +R   V R   R+   +   + ++    ER++ +
Sbjct: 35  IGMNEIAKAAGCSRATLYRYFDSREALRTAYVHRETRRLGREIMVKIADVVEPAERLLVS 94

Query: 95  IILSVQRIRADPLGQLMISSIH---GGTQEVAWLADSPLLAGVASDLTGLAGGDP----H 147
           I  +++ +R +P      ++     GG  E+A  ++  + A  A+ L  L   DP     
Sbjct: 95  ITTTLRMVRDNPALAAWFTTTRPPIGG--EMAGRSEV-IAALAAAFLNSLGPDDPTTVER 151

Query: 148 AAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
            A+WVVR++ SL+ +P   E  ER M+ +FV P+
Sbjct: 152 RARWVVRMLTSLLMFPGRDEADERAMIAEFVVPI 185


>tr|A2VHF0|A2VHF0_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 202

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 36  LDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENL-SGRERVVAA 94
           + ++ +A    CSRAT+YRY   +  +R   V R   R+   +   + ++    ER++ +
Sbjct: 35  IGMNEIAKAAGCSRATLYRYFDSREALRTAYVHRETRRLGREIMVKIADVVEPAERLLVS 94

Query: 95  IILSVQRIRADPLGQLMISSIH---GGTQEVAWLADSPLLAGVASDLTGLAGGDP----H 147
           I  +++ +R +P      ++     GG  E+A  ++  + A  A+ L  L   DP     
Sbjct: 95  ITTTLRMVRDNPALAAWFTTTRPPIGG--EMAGRSEV-IAALAAAFLNSLGPDDPTTVER 151

Query: 148 AAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
            A+WVVR++ SL+ +P   E  ER M+ +FV P+
Sbjct: 152 RARWVVRMLTSLLMFPGRDEADERAMIAEFVVPI 185


>tr|A4T8U6|A4T8U6_MYCGI Tax_Id=350054 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium gilvum]
          Length = 206

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 17/171 (9%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           L A +    + +  +A    CSRAT+YRY   +  +    V R + R+   +   + +  
Sbjct: 25  LFAAQSAATVGMHEIAAAAGCSRATLYRYFENREALYTAYVHRESYRLYREMTEQIMSFD 84

Query: 87  G-RERVVAAIILSVQRIRADP------------LGQLMI--SSIHGGTQEVAWLADSPLL 131
             RER++  ++ S++ +R  P            +G  M   S +     E   ++  P  
Sbjct: 85  DPRERLIEGMLSSLRNVRESPALSSWFATTQRPIGAEMAEQSEVIKALTEAFVISLGPDD 144

Query: 132 AGV-ASDLTGLAGGDPHAAKWVVRIVLSLMYWPAESEDVERLMVEKFVAPV 181
           A   AS  TG  G   H ++W+VR++ SLM +P   E  ER M+E+FV P+
Sbjct: 145 ADARASGATG-EGSVAHRSRWLVRVMTSLMLFPGHDEADERAMLEEFVVPI 194


>tr|Q1B4W6|Q1B4W6_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 193

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 41  LATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLSG----RERVVAAII 96
           +A    CSRAT+YR+   ++ +    V R A R+    R+  E+L G     ER++   +
Sbjct: 27  VAEAAGCSRATLYRHFDSRDTLHTAYVHREAQRL---YRTLTEHLDGVSDPAERLIEGTL 83

Query: 97  LSVQRIRADPLGQLMISS----IHGGTQEVAWLADSPLLAGVASDLTGLAGGDPHAAKWV 152
           L+++ +R  P      +     I G   E + +  + + A V S   G +G     A+W+
Sbjct: 84  LTLRSVREKPALASWFAPTARPIGGEWAERSEVVRAMVEAFVRS--LGDSGDVERRARWL 141

Query: 153 VRIVLSLMYWPAESEDVERLMVEKFVAP 180
           VR++ SL+ +P   E  ER M+ +F+ P
Sbjct: 142 VRVLTSLLLFPGGDEGEERAMLSEFLVP 169


>tr|A3Q3M5|A3Q3M5_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 193

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 41  LATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLSG----RERVVAAII 96
           +A    CSRAT+YR+   ++ +    V R A R+    R+  E+L G     ER++   +
Sbjct: 27  VAEAAGCSRATLYRHFDSRDTLHTAYVHREAQRL---YRTLTEHLDGVSDPAERLIEGTL 83

Query: 97  LSVQRIRADPLGQLMISS----IHGGTQEVAWLADSPLLAGVASDLTGLAGGDPHAAKWV 152
           L+++ +R  P      +     I G   E + +  + + A V S   G +G     A+W+
Sbjct: 84  LTLRSVREKPALASWFAPTARPIGGEWAERSEVVRAMVEAFVRS--LGDSGDVERRARWL 141

Query: 153 VRIVLSLMYWPAESEDVERLMVEKFVAP 180
           VR++ SL+ +P   E  ER M+ +F+ P
Sbjct: 142 VRVLTSLLLFPGGDEGEERAMLSEFLVP 169


>tr|A1UK71|A1UK71_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 193

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 41  LATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLSG----RERVVAAII 96
           +A    CSRAT+YR+   ++ +    V R A R+    R+  E+L G     ER++   +
Sbjct: 27  VAEAAGCSRATLYRHFDSRDTLHTAYVHREAQRL---YRTLTEHLDGVSDPAERLIEGTL 83

Query: 97  LSVQRIRADPLGQLMISS----IHGGTQEVAWLADSPLLAGVASDLTGLAGGDPHAAKWV 152
           L+++ +R  P      +     I G   E + +  + + A V S   G +G     A+W+
Sbjct: 84  LTLRSVREKPALASWFAPTARPIGGEWAERSEVVRAMVEAFVRS--LGDSGDVERRARWL 141

Query: 153 VRIVLSLMYWPAESEDVERLMVEKFVAP 180
           VR++ SL+ +P   E  ER M+ +F+ P
Sbjct: 142 VRVLTSLLLFPGGDEGEERAMLSEFLVP 169


>tr|Q5YRI6|Q5YRI6_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 213

 Score = 46.6 bits (109), Expect = 0.001
 Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 12/147 (8%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           L A  GI ++  D +A     +RAT+YR +G K+ I    + R  AR+ D + +A++ + 
Sbjct: 31  LFADLGITRVSADDIARQAGVNRATLYRRIGAKDVIVRAALLRETARVLDRISAALDAVD 90

Query: 87  GR-ERVVAAIILSVQRIRADPL--------GQLMISSIHGGTQEVAWLADSPLLAGVASD 137
              ERV     ++V  +R +P+            +++I  G  ++  LA + +   + + 
Sbjct: 91  DPVERVTRGFAVTVTLLRTNPILVKLLAVDRDQTLAAITVGAADILALATAFVAEQILAT 150

Query: 138 LTGLAGGDPH-AAKWVVRIVLSLMYWP 163
             G+   D H  A  +VR+V SL+  P
Sbjct: 151 DRGVR--DAHTVAGMIVRLVHSLVLTP 175


>tr|A2VGV0|A2VGV0_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 197

 Score = 46.2 bits (108), Expect = 0.002
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 27  LIAHEGINQLDIDRLATLVHCSRATVYRYVGGKNDIRNVVVKRAAARIADSVRSAVENLS 86
           L A  G +   I+ +A   + S+  VY + GGK  +  VVV R  + + D + S++ N  
Sbjct: 17  LFAERGYDGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLDGITSSLTNNR 76

Query: 87  GRERV--VAAIILSVQRIRADPLGQLMI----SSIHGGTQEVAWLADSPLLAGVASDLTG 140
            R RV  VA  +L+    R D   ++MI    +SI  GT        S LL    S ++ 
Sbjct: 77  SRVRVERVALALLTYVEERTDGF-RIMIRDSPASISSGTY-------SSLLNDAVSQVSS 128

Query: 141 LAGGD 145
           +  GD
Sbjct: 129 ILAGD 133


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.321    0.136    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,190,235,876
Number of extensions: 41386504
Number of successful extensions: 107419
Number of sequences better than 10.0: 393
Number of HSP's gapped: 108911
Number of HSP's successfully gapped: 393
Length of query: 184
Length of database: 3,846,993,858
Length adjustment: 129
Effective length of query: 55
Effective length of database: 2,392,492,671
Effective search space: 131587096905
Effective search space used: 131587096905
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)