BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_2855
         (316 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HE15|B2HE15_MYCMM Tax_Id=216594 SubName: Full=Transcription...   590   e-167
tr|A0PS59|A0PS59_MYCUA Tax_Id=362242 SubName: Full=Transcription...   580   e-164
tr|Q73ZF1|Q73ZF1_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   477   e-133
tr|Q1BE17|Q1BE17_MYCSS Tax_Id=164756 SubName: Full=Transcription...   446   e-123
tr|A1UAW9|A1UAW9_MYCSK Tax_Id=189918 SubName: Full=Transcription...   446   e-123
tr|A3PUH5|A3PUH5_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   446   e-123
tr|B1MJ78|B1MJ78_MYCA9 Tax_Id=561007 SubName: Full=Putative tran...   437   e-121
tr|A1T3R0|A1T3R0_MYCVP Tax_Id=350058 SubName: Full=Transcription...   435   e-120
tr|A4T178|A4T178_MYCGI Tax_Id=350054 SubName: Full=Transcription...   428   e-118
tr|A0QRG2|A0QRG2_MYCS2 Tax_Id=246196 SubName: Full=Transcription...   425   e-117
tr|A0QXN4|A0QXN4_MYCS2 Tax_Id=246196 SubName: Full=Transcription...   390   e-107
tr|C2ATC5|C2ATC5_TSUPA Tax_Id=521096 SubName: Full=Transcription...   388   e-106
tr|C9Z845|C9Z845_STRSW Tax_Id=680198 SubName: Full=Putative tran...   278   8e-73
tr|Q9X7Q2|Q9X7Q2_STRCO Tax_Id=1902 SubName: Full=Putative transc...   275   5e-72
tr|Q82MJ3|Q82MJ3_STRAW Tax_Id=33903 (bdpL)SubName: Full=Putative...   275   7e-72
tr|B5H4N2|B5H4N2_STRPR Tax_Id=457429 SubName: Full=AraC-family t...   263   3e-68
tr|B1VTW7|B1VTW7_STRGG Tax_Id=455632 SubName: Full=Putative AdpA...   260   1e-67
tr|B5HSW7|B5HSW7_9ACTO Tax_Id=463191 SubName: Full=AraC-family t...   254   1e-65
tr|A8LZR9|A8LZR9_SALAI Tax_Id=391037 SubName: Full=Transcription...   246   3e-63
tr|C7QHH6|C7QHH6_CATAD Tax_Id=479433 SubName: Full=Transcription...   244   7e-63
tr|Q82ND2|Q82ND2_STRAW Tax_Id=33903 (bdpM)SubName: Full=Putative...   243   3e-62
tr|A6GH36|A6GH36_9DELT Tax_Id=391625 SubName: Full=Transcription...   242   5e-62
tr|B7KQZ1|B7KQZ1_METC4 Tax_Id=440085 SubName: Full=Transcription...   241   1e-61
tr|A9AFS0|A9AFS0_BURM1 Tax_Id=395019 SubName: Full=AraC subfamil...   237   1e-60
tr|B9B3Z1|B9B3Z1_9BURK Tax_Id=513051 SubName: Full=DarR;[Burkhol...   237   1e-60
tr|A9W1U9|A9W1U9_METEP Tax_Id=419610 SubName: Full=ThiJ/PfpI dom...   236   3e-60
tr|B1YVZ4|B1YVZ4_BURA4 Tax_Id=398577 SubName: Full=Transcription...   235   5e-60
tr|B9CCD5|B9CCD5_9BURK Tax_Id=513053 SubName: Full=DarR;[Burkhol...   235   6e-60
tr|B9BTM2|B9BTM2_9BURK Tax_Id=513052 SubName: Full=DarR;[Burkhol...   235   6e-60
tr|A4JHK9|A4JHK9_BURVG Tax_Id=269482 SubName: Full=Transcription...   233   2e-59
tr|C7CHN9|C7CHN9_METED Tax_Id=661410 SubName: Full=Putative bifu...   233   2e-59
tr|C5AWJ8|C5AWJ8_METEA Tax_Id=272630 SubName: Full=Putative bifu...   233   2e-59
tr|B1M6I7|B1M6I7_METRJ Tax_Id=426355 SubName: Full=Transcription...   233   2e-59
tr|B1FDI7|B1FDI7_9BURK Tax_Id=396596 SubName: Full=Transcription...   233   2e-59
tr|B6A033|B6A033_RHILW Tax_Id=395492 SubName: Full=Transcription...   233   3e-59
tr|B4V727|B4V727_9ACTO Tax_Id=465541 SubName: Full=Transcription...   233   3e-59
tr|A2W7P4|A2W7P4_9BURK Tax_Id=350701 SubName: Full=Transcription...   232   4e-59
tr|B1MM37|B1MM37_MYCA9 Tax_Id=561007 SubName: Full=Putative tran...   232   5e-59
tr|B1T2K8|B1T2K8_9BURK Tax_Id=396597 SubName: Full=Transcription...   231   7e-59
tr|Q0BC63|Q0BC63_BURCM Tax_Id=339670 SubName: Full=Transcription...   231   8e-59
tr|B1JY22|B1JY22_BURCC Tax_Id=406425 SubName: Full=Transcription...   231   8e-59
tr|Q1BTV8|Q1BTV8_BURCA Tax_Id=331271 SubName: Full=Transcription...   231   1e-58
tr|B8IS26|B8IS26_METNO Tax_Id=460265 SubName: Full=Transcription...   231   1e-58
tr|B8IA36|B8IA36_METNO Tax_Id=460265 SubName: Full=Transcription...   231   1e-58
tr|A0KA80|A0KA80_BURCH Tax_Id=331272 SubName: Full=Transcription...   231   1e-58
tr|B5WFX0|B5WFX0_9BURK Tax_Id=516466 SubName: Full=Transcription...   231   1e-58
tr|B4EBX5|B4EBX5_BURCJ Tax_Id=216591 SubName: Full=AraC family r...   229   2e-58
tr|B7KRZ3|B7KRZ3_METC4 Tax_Id=440085 SubName: Full=Transcription...   229   3e-58
tr|C7CJM3|C7CJM3_METED Tax_Id=661410 SubName: Full=Transcription...   229   3e-58
tr|Q84H26|Q84H26_9PSED Tax_Id=86192 (darR)SubName: Full=DarR;[Ps...   228   7e-58

>tr|B2HE15|B2HE15_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium marinum]
          Length = 316

 Score =  590 bits (1521), Expect = e-167
 Identities = 298/316 (94%), Positives = 298/316 (94%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTR 60
           MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTR
Sbjct: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTR 60

Query: 61  LPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDG 120
           LPDPSAPVDTVVLPGGGGVDAARDNVALMDW                  FLAAEAGLLDG
Sbjct: 61  LPDPSAPVDTVVLPGGGGVDAARDNVALMDWVKAAAGTARRVVTVCTGTFLAAEAGLLDG 120

Query: 121 CRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEI 180
           CRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEI
Sbjct: 121 CRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEI 180

Query: 181 AQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAA 240
           AQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAA
Sbjct: 181 AQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAA 240

Query: 241 MSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNF 300
           MSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNF
Sbjct: 241 MSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNF 300

Query: 301 IRRVGISPDQYRKAFA 316
           IRRVGISPDQYRKAFA
Sbjct: 301 IRRVGISPDQYRKAFA 316


>tr|A0PS59|A0PS59_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium ulcerans]
          Length = 316

 Score =  580 bits (1496), Expect = e-164
 Identities = 294/316 (93%), Positives = 295/316 (93%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTR 60
           MARKVV VGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTR
Sbjct: 1   MARKVVTVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTR 60

Query: 61  LPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDG 120
           LPDPSAPVDTVVLPGGGGVDAARDNVALMDW                  FLAAEAGLLDG
Sbjct: 61  LPDPSAPVDTVVLPGGGGVDAARDNVALMDWVKAAAGTARRVVTVCTGTFLAAEAGLLDG 120

Query: 121 CRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEI 180
           CRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEI
Sbjct: 121 CRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEI 180

Query: 181 AQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAA 240
           AQTVARWLVLYLRRP GQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAA
Sbjct: 181 AQTVARWLVLYLRRPCGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAA 240

Query: 241 MSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNF 300
           MSPRHFTRVFTGEVGEAP +YVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNF
Sbjct: 241 MSPRHFTRVFTGEVGEAPGRYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNF 300

Query: 301 IRRVGISPDQYRKAFA 316
           IRRVGISPDQYRKAFA
Sbjct: 301 IRRVGISPDQYRKAFA 316


>tr|Q73ZF1|Q73ZF1_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 320

 Score =  477 bits (1227), Expect = e-133
 Identities = 238/314 (75%), Positives = 261/314 (83%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTRLP 62
           R+VVIVGFPGVQ LDVVGP +VF+GASLL+ GGY V LAS+D +PV T  GL F+ T LP
Sbjct: 7   RQVVIVGFPGVQALDVVGPHDVFSGASLLTGGGYQVVLASVDGQPVTTPAGLGFVATALP 66

Query: 63  DPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDGCR 122
           DP  P+DTVVLPGG GVDAAR +  L+ W                  FLAAEAGLLDG R
Sbjct: 67  DPGRPIDTVVLPGGAGVDAARGDAELIAWIKAVAGRARRMVTVCTGAFLAAEAGLLDGHR 126

Query: 123 ATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEIAQ 182
            TTHWAFADRLA EFPAVDVD DPIF+RSS  +WTAAGVTAGIDLALALVE DHGTE+AQ
Sbjct: 127 VTTHWAFADRLASEFPAVDVDADPIFVRSSDTLWTAAGVTAGIDLALALVEDDHGTEVAQ 186

Query: 183 TVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAAMS 242
           TVARWLVLYLRRPGGQTQFAAPVWMPRA+R SIR+VQE IEA+PG PH+++ELA RAAMS
Sbjct: 187 TVARWLVLYLRRPGGQTQFAAPVWMPRARRDSIREVQEIIEAEPGRPHTVDELARRAAMS 246

Query: 243 PRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNFIR 302
           PRHFTRVFT E+GEAP QYVER+RTEAARRQL+ET+DTVV IAARCGFGTAETMRRNFIR
Sbjct: 247 PRHFTRVFTAEIGEAPGQYVERIRTEAARRQLQETDDTVVTIAARCGFGTAETMRRNFIR 306

Query: 303 RVGISPDQYRKAFA 316
           RVGISPDQYR A A
Sbjct: 307 RVGISPDQYRNACA 320


>tr|Q1BE17|Q1BE17_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, AraC family;[Mycobacterium sp.]
          Length = 321

 Score =  446 bits (1148), Expect = e-123
 Identities = 226/319 (70%), Positives = 246/319 (77%), Gaps = 4/319 (1%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLL----SEGGYDVALASIDERPVATGIGLEF 56
           M R V+IVGFPG+Q LD+VGPFEVF GAS        GGY V + S+  RPV TG GL  
Sbjct: 1   MTRSVLIVGFPGIQALDLVGPFEVFTGASRYLATNGGGGYHVTVGSLGGRPVTTGTGLTL 60

Query: 57  MTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAG 116
               LP P  P+DT+VLPGG G   A  +  L+ W                  FLAAEAG
Sbjct: 61  AAEPLPKPDTPLDTLVLPGGQGTQTAVADTELIAWVRAAAPHARRVVTVCTGAFLAAEAG 120

Query: 117 LLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDH 176
           LLDGC ATTHWA+AD  A+ +PAV VDPDPIFIRSSP+VWTAAGVTAGIDLALALVE DH
Sbjct: 121 LLDGCPATTHWAYADAFAKRYPAVAVDPDPIFIRSSPRVWTAAGVTAGIDLALALVEDDH 180

Query: 177 GTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELA 236
           GTE AQTVARWLV+YLRRPGGQTQFAAPVWMPRAKR  IRDVQEAIEA+PGG HSI ELA
Sbjct: 181 GTEAAQTVARWLVMYLRRPGGQTQFAAPVWMPRAKRAPIRDVQEAIEAEPGGAHSIAELA 240

Query: 237 HRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETM 296
            RAAMSPRHFTRVF+ EVGEAP  YVERVRTEAARRQLEET+DTV A+AARCGFGTAETM
Sbjct: 241 QRAAMSPRHFTRVFSTEVGEAPGAYVERVRTEAARRQLEETDDTVTAVAARCGFGTAETM 300

Query: 297 RRNFIRRVGISPDQYRKAF 315
           RRNFIRR+G+SPD YRK F
Sbjct: 301 RRNFIRRLGVSPDHYRKTF 319


>tr|A1UAW9|A1UAW9_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, AraC family;[Mycobacterium sp.]
          Length = 321

 Score =  446 bits (1148), Expect = e-123
 Identities = 226/319 (70%), Positives = 246/319 (77%), Gaps = 4/319 (1%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLL----SEGGYDVALASIDERPVATGIGLEF 56
           M R V+IVGFPG+Q LD+VGPFEVF GAS        GGY V + S+  RPV TG GL  
Sbjct: 1   MTRSVLIVGFPGIQALDLVGPFEVFTGASRYLATNGGGGYHVTVGSLGGRPVTTGTGLTL 60

Query: 57  MTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAG 116
               LP P  P+DT+VLPGG G   A  +  L+ W                  FLAAEAG
Sbjct: 61  AAEPLPKPDTPLDTLVLPGGQGTQTAVADTELIAWVRAAAPHARRVVTVCTGAFLAAEAG 120

Query: 117 LLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDH 176
           LLDGC ATTHWA+AD  A+ +PAV VDPDPIFIRSSP+VWTAAGVTAGIDLALALVE DH
Sbjct: 121 LLDGCPATTHWAYADAFAKRYPAVAVDPDPIFIRSSPRVWTAAGVTAGIDLALALVEDDH 180

Query: 177 GTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELA 236
           GTE AQTVARWLV+YLRRPGGQTQFAAPVWMPRAKR  IRDVQEAIEA+PGG HSI ELA
Sbjct: 181 GTEAAQTVARWLVMYLRRPGGQTQFAAPVWMPRAKRAPIRDVQEAIEAEPGGAHSIAELA 240

Query: 237 HRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETM 296
            RAAMSPRHFTRVF+ EVGEAP  YVERVRTEAARRQLEET+DTV A+AARCGFGTAETM
Sbjct: 241 QRAAMSPRHFTRVFSTEVGEAPGAYVERVRTEAARRQLEETDDTVTAVAARCGFGTAETM 300

Query: 297 RRNFIRRVGISPDQYRKAF 315
           RRNFIRR+G+SPD YRK F
Sbjct: 301 RRNFIRRLGVSPDHYRKTF 319


>tr|A3PUH5|A3PUH5_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, AraC family;[Mycobacterium sp.]
          Length = 321

 Score =  446 bits (1147), Expect = e-123
 Identities = 228/319 (71%), Positives = 248/319 (77%), Gaps = 4/319 (1%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGAS--LLSEG--GYDVALASIDERPVATGIGLEF 56
           M R V+IVGFPG+Q LD+VGPFEVF GAS  L  +G  GY V + S+  RPV TG GL  
Sbjct: 1   MTRSVLIVGFPGIQALDLVGPFEVFTGASRYLAPDGRDGYHVTVGSLGGRPVTTGTGLTL 60

Query: 57  MTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAG 116
               LP P  P+DT+VLPGG G   A  +  L+ W                  FLAAEAG
Sbjct: 61  AAEPLPKPDTPLDTLVLPGGQGTQTAVADTELIAWVRAAAPHARRVVTVCTGAFLAAEAG 120

Query: 117 LLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDH 176
           LLDGC ATTHWA+AD  A+ +PAV VDPDPIFIRSSP+VWTAAGVTAGIDLALALVE DH
Sbjct: 121 LLDGCPATTHWAYADAFAKRYPAVAVDPDPIFIRSSPRVWTAAGVTAGIDLALALVEDDH 180

Query: 177 GTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELA 236
           GTE AQTVARWLV+YLRRPGGQTQFAAPVWMPRAKR  IRDVQEAIEA+PGG HSI ELA
Sbjct: 181 GTEAAQTVARWLVMYLRRPGGQTQFAAPVWMPRAKRAPIRDVQEAIEAEPGGAHSIAELA 240

Query: 237 HRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETM 296
            RAAMSPRHFTRVF+ EVGEAP  YVERVRTEAARRQLEET+DTV AIAARCGFGTAETM
Sbjct: 241 QRAAMSPRHFTRVFSTEVGEAPGAYVERVRTEAARRQLEETDDTVTAIAARCGFGTAETM 300

Query: 297 RRNFIRRVGISPDQYRKAF 315
           RRNFIRR+G+SPD YRK F
Sbjct: 301 RRNFIRRLGVSPDHYRKTF 319


>tr|B1MJ78|B1MJ78_MYCA9 Tax_Id=561007 SubName: Full=Putative
           transcriptional regulator, AraC family;[Mycobacterium
           abscessus]
          Length = 326

 Score =  437 bits (1124), Expect = e-121
 Identities = 221/318 (69%), Positives = 247/318 (77%), Gaps = 3/318 (0%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEG---GYDVALASIDERPVATGIGLEFM 57
           M R VVI+GFPGVQ LD+VGP+EVFA AS    G   GYDV L S D  PV+TG G+E +
Sbjct: 1   MRRSVVILGFPGVQALDLVGPYEVFATASRHMTGTTPGYDVKLVSADGAPVSTGSGMELV 60

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
           T  LPDP    DT++LPGG GV A + + ALM W                  FLAAEAGL
Sbjct: 61  TQPLPDPEPGCDTLLLPGGIGVSAVQRDAALMSWVRAAARGARRVVSVCNGAFLAAEAGL 120

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDGCRATTHWA A +LA EFP+V VDPDPIFIRSS K WTAAGVTAGIDLALALVE DHG
Sbjct: 121 LDGCRATTHWAIAGQLASEFPSVTVDPDPIFIRSSDKTWTAAGVTAGIDLALALVEEDHG 180

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
            E+AQ VARWLVLYLRRPGGQ+QFAAPVWMPRAKR  IRDVQEAIEA+P G H + ELA 
Sbjct: 181 AEVAQAVARWLVLYLRRPGGQSQFAAPVWMPRAKRMPIRDVQEAIEAEPSGSHRVPELAR 240

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
            AAMSPRHFTRVFT EVGEAP  YVER+R+EAARRQLEET+DT+V IA RCGFG+AE++R
Sbjct: 241 LAAMSPRHFTRVFTAEVGEAPSAYVERIRSEAARRQLEETDDTMVVIAGRCGFGSAESLR 300

Query: 298 RNFIRRVGISPDQYRKAF 315
           RNF+RR+G+SPDQYRK F
Sbjct: 301 RNFVRRMGVSPDQYRKTF 318


>tr|A1T3R0|A1T3R0_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, AraC family with amidase-like
           domain;[Mycobacterium vanbaalenii]
          Length = 336

 Score =  435 bits (1118), Expect = e-120
 Identities = 225/322 (69%), Positives = 248/322 (77%), Gaps = 7/322 (2%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEG------GYDVALASIDERPVATGIGL 54
           M R VVIVGF GVQ LDVVGPF+VF GASL S G      GYDV + ++D  PV+TG GL
Sbjct: 16  MVRTVVIVGFAGVQALDVVGPFDVFTGASL-SVGARGLGDGYDVRVVAVDGAPVSTGTGL 74

Query: 55  EFMTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAE 114
                 LP P   VDTVVLPGG G D AR +  L+DW                   LAA+
Sbjct: 75  TLAADPLPGPDEAVDTVVLPGGWGADTARRDQVLIDWITAAAARARRVVSVCNGAVLAAQ 134

Query: 115 AGLLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEG 174
           AGLLDGC ATTHWA+A +LA EFP+V VDPDPIF+RSS KVWTAAGVTAGIDLALALVE 
Sbjct: 135 AGLLDGCVATTHWAYAPQLAAEFPSVTVDPDPIFVRSSEKVWTAAGVTAGIDLALALVED 194

Query: 175 DHGTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEE 234
           DHGTE AQ VAR LV+YLRRPGGQTQFAAPVWMPRA+R  IRDVQEA+EA+PGG HSI E
Sbjct: 195 DHGTETAQIVARHLVMYLRRPGGQTQFAAPVWMPRARRTPIRDVQEAVEAEPGGAHSIAE 254

Query: 235 LAHRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAE 294
           LA  AAMSPRHFTRVFT EVGEAP  YVERVRTEAARRQLEET+DTV  IAARCGFG+AE
Sbjct: 255 LARLAAMSPRHFTRVFTEEVGEAPGAYVERVRTEAARRQLEETDDTVTVIAARCGFGSAE 314

Query: 295 TMRRNFIRRVGISPDQYRKAFA 316
           T+RRNF+RR+G+SPDQYR+ FA
Sbjct: 315 TLRRNFVRRLGVSPDQYRRTFA 336


>tr|A4T178|A4T178_MYCGI Tax_Id=350054 SubName: Full=Transcriptional
           regulator, AraC family with amidase-like
           domain;[Mycobacterium gilvum]
          Length = 320

 Score =  428 bits (1100), Expect = e-118
 Identities = 217/320 (67%), Positives = 245/320 (76%), Gaps = 4/320 (1%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEG----GYDVALASIDERPVATGIGLEF 56
           M R V+IVGF GVQ LD+VGPF+VF GASL        GY V + S+   PV+TG GL  
Sbjct: 1   MTRTVLIVGFAGVQALDIVGPFDVFTGASLAVTARGGDGYAVTVVSVGGDPVSTGTGLTL 60

Query: 57  MTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAG 116
               LPDP  P+DT+VLPGG G DAAR +  L+DW                   LAA+AG
Sbjct: 61  TAVPLPDPGHPIDTLVLPGGFGADAARRDDVLIDWITAIAPHARRVVSVCSGAVLAAQAG 120

Query: 117 LLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDH 176
           LLDGC ATTHWA+A  +A EFP+V VDPDPIF+RSS KVWTAAGVTAGIDLAL+LVE DH
Sbjct: 121 LLDGCVATTHWAYAPHMAVEFPSVTVDPDPIFVRSSEKVWTAAGVTAGIDLALSLVEDDH 180

Query: 177 GTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELA 236
           GTE+AQTVAR LV+YLRRPGGQTQFAAPVWMPRA+R  IRDVQE IE++PG  HSI ELA
Sbjct: 181 GTELAQTVARHLVMYLRRPGGQTQFAAPVWMPRARRSPIRDVQEVIESEPGAVHSISELA 240

Query: 237 HRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETM 296
            RAAMS RHFTR FT EVGEAP  YVERVRTEAARRQLEET+DTV  IAARCGFG+AET+
Sbjct: 241 RRAAMSTRHFTRAFTDEVGEAPGAYVERVRTEAARRQLEETDDTVTVIAARCGFGSAETL 300

Query: 297 RRNFIRRVGISPDQYRKAFA 316
           RR+F+RR+G+SPDQYRK FA
Sbjct: 301 RRSFVRRLGVSPDQYRKTFA 320


>tr|A0QRG2|A0QRG2_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulator, AraC family protein;[Mycobacterium smegmatis]
          Length = 335

 Score =  425 bits (1093), Expect = e-117
 Identities = 218/322 (67%), Positives = 246/322 (76%), Gaps = 6/322 (1%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEG------GYDVALASIDERPVATGIGL 54
           + R VVI+G+ GVQ LD+VGPF+VF GA+L   G       Y V LAS D  PV T  GL
Sbjct: 10  VTRSVVILGYSGVQALDLVGPFDVFTGAALWLAGQGREQQAYTVTLASADGAPVTTLTGL 69

Query: 55  EFMTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAE 114
           EF+    PDP   +DTVV+PGG G D AR N  +++W                  FLAAE
Sbjct: 70  EFVAAPPPDPCGDIDTVVIPGGIGADEARRNREVVNWIKTAADHARRVVTVCTGAFLAAE 129

Query: 115 AGLLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEG 174
           AGLLDGC ATTHWA A RLA EFP+V VDP+PIF+RSS +VWTAAGVTAGIDLAL+LVE 
Sbjct: 130 AGLLDGCPATTHWASARRLADEFPSVTVDPEPIFMRSSERVWTAAGVTAGIDLALSLVED 189

Query: 175 DHGTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEE 234
           DHGT++AQ VARWLVLYLRRPGGQTQFAAPVWMPRAKR  IR VQEAIEA PGG HSI +
Sbjct: 190 DHGTDVAQNVARWLVLYLRRPGGQTQFAAPVWMPRAKRAPIRAVQEAIEADPGGAHSISD 249

Query: 235 LAHRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAE 294
           LA RAAMSPRHFTRVFT EVG++P  YVER+R +AARRQLEE++DTV AIAARCGFGTAE
Sbjct: 250 LAQRAAMSPRHFTRVFTEEVGQSPGVYVERIRIDAARRQLEESDDTVTAIAARCGFGTAE 309

Query: 295 TMRRNFIRRVGISPDQYRKAFA 316
           TMRRNFIRR+G+SPDQYRK  A
Sbjct: 310 TMRRNFIRRLGVSPDQYRKTSA 331


>tr|A0QXN4|A0QXN4_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulator, AraC family protein;[Mycobacterium smegmatis]
          Length = 337

 Score =  390 bits (1003), Expect = e-107
 Identities = 203/319 (63%), Positives = 232/319 (72%), Gaps = 7/319 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSEG------GYDVALASIDERPVATGIGLEF 56
           + V +VGF GVQ LDVVGPFE F  AS   +       GY+V LAS+D +PV    GL  
Sbjct: 19  KAVAVVGFSGVQALDVVGPFETFTCASRFVDDETWQLEGYEVMLASVDGQPVPASTGLGL 78

Query: 57  MTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAG 116
           M   LPDP   VDTVV+PGG GV  A  + ALM W                  FL AEAG
Sbjct: 79  MACPLPDPEQ-VDTVVIPGGVGVRQAAADPALMTWFREAAEHARRIVSVCTGAFLVAEAG 137

Query: 117 LLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDH 176
           LL+GC+ATTHWAFAD LA+ +P V VDP+P+F+RSS +VWTAAGV+AGIDLALALVE DH
Sbjct: 138 LLNGCQATTHWAFADELAQRYPEVRVDPNPMFVRSSRQVWTAAGVSAGIDLALALVEDDH 197

Query: 177 GTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELA 236
            TE+A+ VARWLVL LRRPGGQ QFAAP+W PRA+R  IR VQE IEA P  PH+I+ LA
Sbjct: 198 STEVAKAVARWLVLSLRRPGGQAQFAAPIWTPRARRDEIRLVQEVIEANPAAPHTIDTLA 257

Query: 237 HRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETM 296
             AAMS RHFTRVFT EVGE P +YV+RVRT+AARRQLEET DTV AIAARCGFGT ETM
Sbjct: 258 TSAAMSTRHFTRVFTSEVGEGPGRYVDRVRTQAARRQLEETTDTVAAIAARCGFGTPETM 317

Query: 297 RRNFIRRVGISPDQYRKAF 315
           RRNFIR +G+SP+ YRKAF
Sbjct: 318 RRNFIRLLGVSPEAYRKAF 336


>tr|C2ATC5|C2ATC5_TSUPA Tax_Id=521096 SubName: Full=Transcriptional
           regulator containing an amidase domain and an AraC-type
           DNA-binding HTH domain;[Tsukamurella paurometabola DSM
           20162]
          Length = 327

 Score =  388 bits (997), Expect = e-106
 Identities = 196/327 (59%), Positives = 238/327 (72%), Gaps = 11/327 (3%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGAS-----LLSEG------GYDVALASIDERPVA 49
           M + V+++ +PGVQPLDVVGPF+  A A+     L ++G       YD+ L +    PV 
Sbjct: 1   MTKAVIVLAYPGVQPLDVVGPFDALAAANTHLDALAAKGRRSTGADYDIRLVASTTPPVR 60

Query: 50  TGIGLEFMTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXX 109
           +  GL F T  LPDP+A +DTVV+PGG G + AR +  ++DW                  
Sbjct: 61  SNTGLCFATEPLPDPTARIDTVVIPGGPGAETARGSTEIVDWIRAVHQHARRVVSVCTGA 120

Query: 110 FLAAEAGLLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLAL 169
           FL A+AGLLDGCRATTHW  A RLA  +PA+DVDPDPIF+RSS ++WT+AGVTAGIDLAL
Sbjct: 121 FLLAQAGLLDGCRATTHWGSAARLATLYPAIDVDPDPIFVRSSEQIWTSAGVTAGIDLAL 180

Query: 170 ALVEGDHGTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGP 229
           AL+E DHGTE AQ VAR LVL LRRPGGQTQ+AAPVWMPRA+R  +R VQ++IE +PG  
Sbjct: 181 ALIEADHGTEAAQAVARGLVLPLRRPGGQTQYAAPVWMPRAERAPVRAVQQSIETEPGAA 240

Query: 230 HSIEELAHRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCG 289
           HSI  LA RA MSPRHF+R+FT EVGE+P  YVER+RTEAARRQLEET DTV  IA RCG
Sbjct: 241 HSITLLARRAGMSPRHFSRIFTHEVGESPGLYVERIRTEAARRQLEETTDTVAVIAERCG 300

Query: 290 FGTAETMRRNFIRRVGISPDQYRKAFA 316
           FG+AET+RR F RRVG SPD+YR++FA
Sbjct: 301 FGSAETLRRVFGRRVGTSPDRYRRSFA 327


>tr|C9Z845|C9Z845_STRSW Tax_Id=680198 SubName: Full=Putative
           transcriptional regulator;[Streptomyces scabies]
          Length = 319

 Score =  278 bits (710), Expect = 8e-73
 Identities = 162/318 (50%), Positives = 201/318 (63%), Gaps = 13/318 (4%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTRLP 62
           R V++V F GVQ LDV GP EVFAGA L + G Y +A AS+D  PV T  GL    T +P
Sbjct: 2   RTVLVVLFDGVQSLDVTGPLEVFAGAELHTPGTYRIATASLDGTPVRTSSGL----TLVP 57

Query: 63  DPS---APVD-TVVLPGGGGV-DAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
           D S   AP   T+++PGG G  + A + VA   W                   L AEAGL
Sbjct: 58  DHSLAGAPAPHTLLVPGGHGTRNPAPEIVA---WLRAHGPRATRLVSVCTGAVLLAEAGL 114

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RATTHWA+ D LAR  PAV+VDPDPIF+R    + T+AGVT+GIDLALALVE D G
Sbjct: 115 LDGRRATTHWAYCDTLARRHPAVEVDPDPIFVRDG-HIATSAGVTSGIDLALALVEEDIG 173

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
            E A  +AR LV++LRRPG Q QF+A +    A+R  +R+VQ+ I   PG   S+E LA 
Sbjct: 174 REAALAIARHLVVFLRRPGNQAQFSAQLAAQTAQREPLREVQQWITEHPGDDLSVERLAA 233

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           RA +SPRHF R F  E G  P +YV+RVR E ARR LE+T D V  I+  CG+GT+E MR
Sbjct: 234 RARLSPRHFARAFQAETGTTPGRYVDRVRLEHARRLLEDTADGVEEISRACGYGTSEAMR 293

Query: 298 RNFIRRVGISPDQYRKAF 315
           R F++ +G SP +YR+ F
Sbjct: 294 RAFVKALGTSPAEYRRRF 311


>tr|Q9X7Q2|Q9X7Q2_STRCO Tax_Id=1902 SubName: Full=Putative
           transcriptional regulator;[Streptomyces coelicolor]
          Length = 325

 Score =  275 bits (703), Expect = 5e-72
 Identities = 151/313 (48%), Positives = 194/313 (61%), Gaps = 3/313 (0%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTRLP 62
           R V+++ F GVQ LDV GP EVFAGA   + G Y +  AS+D  PV T  GL  +  +  
Sbjct: 10  RTVLVLLFDGVQSLDVTGPVEVFAGAEQHTPGTYRIRTASLDGAPVRTSSGLHLVPDQAL 69

Query: 63  DPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDGCR 122
                 DT+V+PGG G      +  L +W                   L A AGLLDG R
Sbjct: 70  GTGPQPDTLVVPGGRGT--RNPDPRLTEWLRRHGTGARRLVSVCTGAILLARAGLLDGRR 127

Query: 123 ATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEIAQ 182
            TTHWA++DRLAR+ PAV+VDPDPI+IR    V T+AGVT+GIDLALALVE D G ++A 
Sbjct: 128 VTTHWAYSDRLARDHPAVEVDPDPIYIRDG-NVATSAGVTSGIDLALALVEEDLGRDVAL 186

Query: 183 TVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAAMS 242
           TVAR LV++LRRPG Q QF+A +    A+R  +R++Q  I   PG   S+E LA RA++S
Sbjct: 187 TVARHLVVFLRRPGNQAQFSAQLAAQTARREPLRELQHWITEHPGDDLSVESLAARASLS 246

Query: 243 PRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNFIR 302
           PRHF R F  E G  P +YV+RVR E ARR LE+T D V  ++   G+GT E MRR F++
Sbjct: 247 PRHFARAFQAETGTTPGRYVDRVRLEHARRLLEDTGDGVEEVSRASGYGTPEAMRRAFVK 306

Query: 303 RVGISPDQYRKAF 315
            +G SP +YR+ F
Sbjct: 307 ALGTSPAEYRRRF 319


>tr|Q82MJ3|Q82MJ3_STRAW Tax_Id=33903 (bdpL)SubName: Full=Putative
           AraC-family transcriptional regulator;[Streptomyces
           avermitilis]
          Length = 334

 Score =  275 bits (702), Expect = 7e-72
 Identities = 152/313 (48%), Positives = 193/313 (61%), Gaps = 3/313 (0%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTRLP 62
           R VV+V F  VQ LDV GP EVFAGA   S G Y +  AS+D  PV T  GL  +     
Sbjct: 19  RTVVVVLFDDVQSLDVTGPLEVFAGAEAHSGGTYRIRTASLDGAPVRTSSGLALVPDHSL 78

Query: 63  DPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDGCR 122
             +    T+++PGG G    R +  L+DW                   L AEAGLLDG R
Sbjct: 79  TEAPAAHTLLVPGGNGT--RRPDPRLVDWLRAHGPRAERLVSVCTGAVLLAEAGLLDGRR 136

Query: 123 ATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEIAQ 182
           ATTHWA+ D+LAR+ PAV+VD DPI++R    + T+AGVTAGIDLALALVE D G ++A 
Sbjct: 137 ATTHWAYCDQLARDHPAVEVDADPIYVRDG-HIATSAGVTAGIDLALALVEEDLGRDVAL 195

Query: 183 TVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAAMS 242
            VAR LV++LRRPG Q QF+A +    A+R  +R+VQ+ I   PG   ++E LA RA +S
Sbjct: 196 LVARHLVVFLRRPGNQAQFSAQLAAQTAQRAPLREVQQWITEHPGDDLTVESLAARARLS 255

Query: 243 PRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNFIR 302
           PRHF R F  E G  P +YV+ VR E ARR LE+T D V  I+  CG+GT E MRR F+R
Sbjct: 256 PRHFARAFQAETGTTPGRYVDGVRLEHARRLLEDTADGVEEISRACGYGTPEAMRRAFVR 315

Query: 303 RVGISPDQYRKAF 315
            +G +P +YR+ F
Sbjct: 316 ALGTAPAEYRRRF 328


>tr|B5H4N2|B5H4N2_STRPR Tax_Id=457429 SubName: Full=AraC-family
           transcriptional regulator;[Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 334

 Score =  263 bits (671), Expect = 3e-68
 Identities = 151/316 (47%), Positives = 190/316 (60%), Gaps = 7/316 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLL--SEGGYDVALASIDERPVATGIGLEFMTTR 60
           R +++V F GVQ LDV GP EVF GA         Y +  AS+D  PV T  GL  +   
Sbjct: 15  RTLLVVLFDGVQSLDVTGPVEVFEGARRACGDRSAYRIRTASLDGSPVRTSSGLTLVPDA 74

Query: 61  -LPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLD 119
            L    AP  T+++PGG G    R +  L+DW                   L AEAGLLD
Sbjct: 75  GLAGEPAP-HTLLVPGGEGT--RRPDPRLVDWLRDRAPAAGRLVSVCTGALLLAEAGLLD 131

Query: 120 GCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTE 179
           G RATTHWA  D LA  +P V V+PDPIF+R   ++ T+AGVTAGIDLALALVE D G E
Sbjct: 132 GRRATTHWAVCDHLAGTYPKVRVEPDPIFVRDG-RLSTSAGVTAGIDLALALVEEDLGRE 190

Query: 180 IAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRA 239
           +A TVAR LV++LRRPG Q+QF+A +    A+R  +R VQ  +   P     +E LA RA
Sbjct: 191 VALTVARHLVVFLRRPGNQSQFSAQLAAQTARREPLRSVQHWVTQHPEADLCVESLAARA 250

Query: 240 AMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRN 299
            +SPRHF R F  E G  P +YVERVR E ARR LE+T D V  I+  CG+GT E MRR 
Sbjct: 251 GLSPRHFARAFQAETGTTPGRYVERVRLEHARRLLEDTADGVTKISRACGYGTTEAMRRA 310

Query: 300 FIRRVGISPDQYRKAF 315
           F++ +G++P +YR+ F
Sbjct: 311 FVKALGVAPAEYRRRF 326


>tr|B1VTW7|B1VTW7_STRGG Tax_Id=455632 SubName: Full=Putative
           AdpA-family transcriptional regulator;[Streptomyces
           griseus subsp. griseus]
          Length = 323

 Score =  260 bits (665), Expect = 1e-67
 Identities = 149/314 (47%), Positives = 187/314 (59%), Gaps = 5/314 (1%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTT-RL 61
           R V++V F GVQ LDV GP EVFAGAS      Y +  AS+D  PV    GL  M    L
Sbjct: 7   RSVLVVLFDGVQSLDVTGPMEVFAGASRAPGVSYGLRTASLDGAPVRATSGLTLMPDGTL 66

Query: 62  PDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDGC 121
            D  AP  T+++PGG G   A     L+ W                   L AEAGLLDG 
Sbjct: 67  ADAPAP-HTLLVPGGHGTRGAHPE--LIGWLREHAPRAERLVSVCTGALLLAEAGLLDGH 123

Query: 122 RATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEIA 181
           R TTHW   ++LAR+ PAV VDP+PIF+R   ++ T+AGVTAGIDLALALVE DHG ++A
Sbjct: 124 RVTTHWNHCEQLARDHPAVRVDPEPIFVRDG-RLATSAGVTAGIDLALALVEEDHGRDLA 182

Query: 182 QTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAAM 241
             +AR LV++LRRPG Q QF+A +    A+   +R+VQ  I   P G   ++ LA RA +
Sbjct: 183 LNIARHLVVFLRRPGNQAQFSAQLSAQTARSEPLREVQHWITQHPDGDLGVDALAARARL 242

Query: 242 SPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNFI 301
           SPRHF R F  E G  P +YVERVR E ARR LE+T D V  +A   G+GT E MRR F+
Sbjct: 243 SPRHFARAFRAETGTTPGRYVERVRLEHARRLLEDTADGVERVARASGYGTPEAMRRAFV 302

Query: 302 RRVGISPDQYRKAF 315
           + +   P +YR+ F
Sbjct: 303 KTLATGPAEYRRRF 316


>tr|B5HSW7|B5HSW7_9ACTO Tax_Id=463191 SubName: Full=AraC-family
           transcriptional regulator;[Streptomyces sviceus ATCC
           29083]
          Length = 357

 Score =  254 bits (648), Expect = 1e-65
 Identities = 147/305 (48%), Positives = 187/305 (61%), Gaps = 13/305 (4%)

Query: 16  LDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTRLPDPS-----APVDT 70
           LDV GP EVFAGA  L+ G Y +  AS+D  PV T  GL    T +PD S     AP  T
Sbjct: 55  LDVTGPLEVFAGAEQLTPGTYRIRTASLDGSPVRTSSGL----TVVPDESLARAGAP-HT 109

Query: 71  VVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDGCRATTHWAFA 130
           +++PGG G    R +  L DW                     AEAGLLDG RATTHWA+ 
Sbjct: 110 LLVPGGQGT--RRPDTRLTDWLREHGPRAERLVSVCTGAIRLAEAGLLDGRRATTHWAYC 167

Query: 131 DRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEIAQTVARWLVL 190
           D+LAR+ PAV+VDPDPI++R   +V T+AGVT+GIDLALALVE D   + A  +AR LV+
Sbjct: 168 DKLARDHPAVEVDPDPIYVRDG-QVSTSAGVTSGIDLALALVEEDLDRKAALAIARHLVV 226

Query: 191 YLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAAMSPRHFTRVF 250
           +LRRPG Q QF+A +    A+R  +R+VQ  I   P    S+E LA RA +SPRHF R F
Sbjct: 227 FLRRPGNQAQFSAQLAAQTAQREPLREVQLWITEHPADDLSVEALAARARLSPRHFARAF 286

Query: 251 TGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNFIRRVGISPDQ 310
             E G  P +YV+RVR E ARR LE+T D +  I+   G+GT E MRR F++ +G +P +
Sbjct: 287 QTETGMTPGRYVDRVRLEHARRLLEDTSDGIEEISRASGYGTPEGMRRAFVKALGTAPSE 346

Query: 311 YRKAF 315
           YR+ F
Sbjct: 347 YRRRF 351


>tr|A8LZR9|A8LZR9_SALAI Tax_Id=391037 SubName: Full=Transcriptional
           regulator, AraC family;[Salinispora arenicola]
          Length = 338

 Score =  246 bits (627), Expect = 3e-63
 Identities = 142/316 (44%), Positives = 179/316 (56%), Gaps = 4/316 (1%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLL---SEGGYDVALASIDERPVATGIGLEFMTT 59
           R+VV+V +P VQ LDV GP EVF   +        GY +   S     V T  GL     
Sbjct: 4   RRVVVVVYPEVQALDVTGPVEVFDTVNRFLPDPAAGYRIEYVSAAAPLVRTSAGLMIQAA 63

Query: 60  RLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLD 119
            L      +D +++PGG G+  A  +  L+ W                  FL AEAGLLD
Sbjct: 64  PLETGEGRMDNLLVPGGWGLGQALADHDLLCWIQRAAKRAQRVTSVCGGSFLLAEAGLLD 123

Query: 120 GCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTE 179
           G RATTHWA+   +AR +PAV VDP+PI++   P V T+AGVTAGID+ALALVE DHG E
Sbjct: 124 GRRATTHWAYCQDMARRYPAVTVDPEPIYVWDGPYV-TSAGVTAGIDMALALVEADHGAE 182

Query: 180 IAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRA 239
            A  +AR+LVL+ +R GGQ QF+  +    A R  IR  QE + A    P  + ELA R 
Sbjct: 183 FALEIARYLVLFFKRDGGQPQFSGMLDAQLADRVPIRTAQEWVRAHVEHPLPVPELAERV 242

Query: 240 AMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRN 299
            MSPR+F+RVF  EVG  P QYV + R   AR  LE T+ ++  IA RCGFG  ET  R 
Sbjct: 243 HMSPRNFSRVFRREVGMTPGQYVVQTRVGRARELLESTDLSISQIARRCGFGRVETFLRT 302

Query: 300 FIRRVGISPDQYRKAF 315
           F R VG++P  YR+ F
Sbjct: 303 FDRAVGLTPGAYRQRF 318


>tr|C7QHH6|C7QHH6_CATAD Tax_Id=479433 SubName: Full=Transcriptional
           regulator, AraC family;[Catenulispora acidiphila]
          Length = 323

 Score =  244 bits (624), Expect = 7e-63
 Identities = 138/321 (42%), Positives = 186/321 (57%), Gaps = 6/321 (1%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGG---YDVALASIDERPVATGIGLEFM 57
           M+R+VV + FP  Q LD+ GP EVF+ A +L   G   Y   + ++   PV    GL  +
Sbjct: 1   MSRRVVFLVFPRFQLLDLTGPLEVFSQADMLFSPGRQRYVTEVVALGAEPVTASDGLAVV 60

Query: 58  TTRLPDPSA--PVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEA 115
             R    +A  P+DT+V+ GG GV  A  +   ++W                  FL A A
Sbjct: 61  PHRTLADAAELPIDTLVVVGGRGVRTAMTDPVYVEWVRAAAGRARRVTSVCSGTFLLAAA 120

Query: 116 GLLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGD 175
           GLLDG RA THW   + LA  FP + V+ DPIF+R  P +WT+AGVTAG+DLALALVE D
Sbjct: 121 GLLDGRRAVTHWDSCEELAERFPEIRVEADPIFVRDDP-LWTSAGVTAGVDLALALVEDD 179

Query: 176 HGTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEEL 235
            G E+A+ +A+ LV++++RPGGQ QF+  +   R  R ++R+ Q  I        S+  L
Sbjct: 180 LGAEVARRIAKQLVVFVQRPGGQAQFSTQLAAQRPGRDALRETQTWIADHLDDNLSLAAL 239

Query: 236 AHRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAET 295
           A RAA+S RHF+RVF  E G     YVE  R EAA+R LE T D +  IA  CGFGT ET
Sbjct: 240 ARRAALSERHFSRVFRAETGMTVAAYVEAARIEAAQRLLESTRDGLDRIARTCGFGTVET 299

Query: 296 MRRNFIRRVGISPDQYRKAFA 316
           M R F R + ++P +YR+ F+
Sbjct: 300 MHRTFNRTIRVTPGEYRRHFS 320


>tr|Q82ND2|Q82ND2_STRAW Tax_Id=33903 (bdpM)SubName: Full=Putative
           AraC-family transcriptional regulator;[Streptomyces
           avermitilis]
          Length = 359

 Score =  243 bits (619), Expect = 3e-62
 Identities = 143/318 (44%), Positives = 186/318 (58%), Gaps = 4/318 (1%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGAS-LLSEGG--YDVALASIDERPVATGIGLEFM 57
           + R+VV+V + G   LD+ GP EVF  A+ LL   G  Y + L S D   V T  G+   
Sbjct: 23  LERRVVVVVYAGALALDITGPIEVFDTANRLLPPAGAPYRIDLVSPDAPLVRTSSGVRVE 82

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
            + L     P+DT+++PGG  +D A  + AL+ W                  FL AEAGL
Sbjct: 83  ASPLDAGQGPIDTLLVPGGWSLDNALRDRALVSWIGRAAARSHRVASVCGGSFLLAEAGL 142

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RATTHWA+++ +A  +P V VD +PIF+   P V T+AGV+ GID+ALALVE DHG
Sbjct: 143 LDGRRATTHWAYSEAMACRYPDVTVDAEPIFVWDGPFV-TSAGVSTGIDMALALVEADHG 201

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A   AR+LVL+L+R GGQ+QF+A +    A  P IR  QE I      P  + E+A 
Sbjct: 202 AALALETARFLVLFLKRHGGQSQFSAILDAQLADHPPIRTAQEWILDNLHNPLPVAEIAR 261

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           RA MS R+F RVF  EVG  P QYVER R   AR  LE T+ T+  IA RCGF   ET  
Sbjct: 262 RANMSLRNFARVFRREVGTTPGQYVERTRIARARELLETTDLTIGQIAGRCGFAAPETFF 321

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F R +G++P +YR  F
Sbjct: 322 RSFGRTLGLTPKEYRHRF 339


>tr|A6GH36|A6GH36_9DELT Tax_Id=391625 SubName: Full=Transcriptional
           regulator, AraC family protein;[Plesiocystis pacifica
           SIR-1]
          Length = 334

 Score =  242 bits (617), Expect = 5e-62
 Identities = 139/319 (43%), Positives = 186/319 (58%), Gaps = 8/319 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGAS--LLSEG----GYDVALASIDERPVATGIGLEF 56
           R+VV +  PGVQPLD+ GP EVF  A+  L + G    GY   L    +R + TG+G+  
Sbjct: 12  RRVVSLALPGVQPLDLFGPMEVFDAATRWLRARGDARPGYRCVLVG-PQRELTTGVGVVV 70

Query: 57  MTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAG 116
           +T  L     P+DTV++ G           A++ W                  F+ AEAG
Sbjct: 71  VTEPLRSLRGPLDTVLVGGAPEFIERTFEPAILRWLRRRAARARRVASICTGAFVLAEAG 130

Query: 117 LLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDH 176
           LLDG RATTHW   ++L   FP V V+ D +++   P + ++AGVTAGIDLALALVE D 
Sbjct: 131 LLDGRRATTHWMATEQLRARFPEVTVEADALYVEDGP-IHSSAGVTAGIDLALALVERDL 189

Query: 177 GTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELA 236
           G E A  VA+ LV++L RPGGQ+QF+A +  P      +R V+  +  +P G H +E LA
Sbjct: 190 GHEAALAVAQGLVMFLHRPGGQSQFSAALKQPTPSHAPLRRVRAEVLERPAGDHRVEGLA 249

Query: 237 HRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETM 296
            RA MSPRHF RVF  + GE P ++V+RVR E AR  LE+    V A+A + GFG+AETM
Sbjct: 250 RRAGMSPRHFARVFAEQTGETPARFVQRVRVERARSLLEQGGLGVDAVAEQVGFGSAETM 309

Query: 297 RRNFIRRVGISPDQYRKAF 315
           RR F+R +G+ P  YR  F
Sbjct: 310 RRAFMRVLGVGPSSYRARF 328


>tr|B7KQZ1|B7KQZ1_METC4 Tax_Id=440085 SubName: Full=Transcriptional
           regulator, AraC family;[Methylobacterium
           chloromethanicum]
          Length = 338

 Score =  241 bits (614), Expect = 1e-61
 Identities = 138/318 (43%), Positives = 185/318 (58%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASL-LSEGG----YDVALASIDERPVATGIGLEFM 57
           R V ++ FPGVQ LDV GP +VFA A+  ++  G    Y + + +     VA+  GL   
Sbjct: 13  RSVEVLAFPGVQVLDVTGPLQVFASANEHVARSGDGPPYRLRVVAKSGGAVASSAGLALA 72

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L      VDT+++ GG GVDAA D+  L++W                  F+ A +G+
Sbjct: 73  AEPLTPMPEAVDTLIVAGGPGVDAAADDPELIEWLCRRTAQARRVASVCTGAFILAASGI 132

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THW++ D  AR FPAV V+ DPIF+R  P VWT+AGVTAGIDLALALVE D G
Sbjct: 133 LDGRRAVTHWSYCDAFARRFPAVHVEADPIFVRDGP-VWTSAGVTAGIDLALALVEADLG 191

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
            E A  VAR+LV++L+RPGGQ QF+A + + + +      +   + A  G   S+  LA 
Sbjct: 192 RETALAVARYLVVFLKRPGGQAQFSAALSL-QTEGDRFDALHRWVRANLGADLSLSALAA 250

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
            A MS R F+R +  E G  P + VER+R EAAR+ L ET   +  IA  CGF + ETMR
Sbjct: 251 EAGMSERSFSRHYLKETGLTPARAVERLRVEAARQMLAETHRPIKRIAYHCGFASEETMR 310

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +  +P  YR  F
Sbjct: 311 RSFLRLLASTPQDYRSRF 328


>tr|A9AFS0|A9AFS0_BURM1 Tax_Id=395019 SubName: Full=AraC subfamily
           transcriptional regulator; SubName: Full=Transcriptional
           regulator, AraC family;[Burkholderia multivorans]
          Length = 322

 Score =  237 bits (605), Expect = 1e-60
 Identities = 141/318 (44%), Positives = 184/318 (57%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGG----YDVALASIDERPVATGIGLEFM 57
           R ++I+ FP  Q LDV GP +VFA  + L+ E G    Y   + + D  PV T  G+  +
Sbjct: 5   RPILILAFPRAQLLDVSGPLQVFASVNELALERGQPAPYAPRIVAADAGPVETSSGVAVV 64

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L   +  +DT+++ GG GV AA  +  L+ W                  FL AEAGL
Sbjct: 65  ADSLRSTARGIDTLIVAGGKGVHAASRDARLVRWVRRQADRARRVASVCTGAFLLAEAGL 124

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THW   D LA  +P V V+ DPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 125 LDGRRAVTHWTRCDELAARYPNVRVEADPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 183

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A  VAR LV++L+RPGGQ QF+A + M R       ++   I    G   S+  LA 
Sbjct: 184 RAVALDVARELVVFLKRPGGQAQFSAMLSMQRTD-DRFGELHAWIAEHLGADLSVPALAE 242

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           RA MS R F R +    G  P + VE++R EAA+R L ET   V  IAARCGFG+ ET+R
Sbjct: 243 RARMSERSFVRHYRASTGRTPARAVEQIRVEAAQRLLGETGWPVKRIAARCGFGSEETLR 302

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP +YR+ F
Sbjct: 303 RSFVRVLGVSPQEYRERF 320


>tr|B9B3Z1|B9B3Z1_9BURK Tax_Id=513051 SubName:
           Full=DarR;[Burkholderia multivorans CGD1]
          Length = 322

 Score =  237 bits (605), Expect = 1e-60
 Identities = 141/318 (44%), Positives = 184/318 (57%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGG----YDVALASIDERPVATGIGLEFM 57
           R ++I+ FP  Q LDV GP +VFA  + L+ E G    Y   + + D  PV T  G+  +
Sbjct: 5   RPILILAFPRAQLLDVSGPLQVFASVNELALERGRPAPYAPRIVAADAGPVETSSGVAVV 64

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L   +  +DT+++ GG GV AA  +  L+ W                  FL AEAGL
Sbjct: 65  ADSLRSAARGIDTLIVAGGKGVHAASRDARLVRWVRRQADRARRVASVCTGAFLLAEAGL 124

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THW   D LA  +P V V+ DPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 125 LDGRRAVTHWTRCDELAARYPNVRVEADPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 183

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A  VAR LV++L+RPGGQ QF+A + M R       ++   I    G   S+  LA 
Sbjct: 184 RAVALDVARELVVFLKRPGGQAQFSAMLSMQRTD-DRFGELHAWIAEHLGADLSVPALAE 242

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           RA MS R F R +    G  P + VE++R EAA+R L ET   V  IAARCGFG+ ET+R
Sbjct: 243 RARMSERSFVRHYRASTGRTPARAVEQIRVEAAQRLLGETGWPVKRIAARCGFGSEETLR 302

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP +YR+ F
Sbjct: 303 RSFVRVLGVSPQEYRERF 320


>tr|A9W1U9|A9W1U9_METEP Tax_Id=419610 SubName: Full=ThiJ/PfpI domain
           protein;[Methylobacterium extorquens]
          Length = 338

 Score =  236 bits (602), Expect = 3e-60
 Identities = 136/318 (42%), Positives = 183/318 (57%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASL-LSEGG----YDVALASIDERPVATGIGLEFM 57
           R V ++ FPGVQ LDV GP +VFA A+  ++  G    Y + + +     VA+  GL   
Sbjct: 13  RSVEVLAFPGVQVLDVTGPLQVFASANEHVARSGDGPPYRLRVVAKSGGAVASSAGLALA 72

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L      VDT+++ GG GVDAA  +  L++W                  F+ A +G+
Sbjct: 73  VEPLTPMPEAVDTLIVAGGPGVDAAAGDPELLEWLRRRTAQARRVASVCTGAFILAASGI 132

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THW++ D  AR FPAV V+ DPIF+R  P VWT+AGVTAGIDLALALVE D G
Sbjct: 133 LDGRRAVTHWSYCDAFARRFPAVRVEADPIFVRDGP-VWTSAGVTAGIDLALALVEADLG 191

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
            E A  VAR+LV++L+RPGGQ QF+A + + + +      +   +    G   S+  LA 
Sbjct: 192 RETALAVARYLVVFLKRPGGQAQFSAALSL-QTEGDRFDALHRWMRVNLGADLSLSALAA 250

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
            A MS R F+R +  E G  P + VER+R EAAR+ L ET   +  IA  CGF + ETMR
Sbjct: 251 EAGMSERSFSRHYLKETGLTPARAVERLRVEAARQMLAETHRPIKRIAQHCGFASEETMR 310

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +  +P  YR  F
Sbjct: 311 RSFLRLLASTPQDYRSRF 328


>tr|B1YVZ4|B1YVZ4_BURA4 Tax_Id=398577 SubName: Full=Transcriptional
           regulator, AraC family;[Burkholderia ambifaria]
          Length = 322

 Score =  235 bits (600), Expect = 5e-60
 Identities = 139/318 (43%), Positives = 182/318 (57%), Gaps = 8/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSE-----GGYDVALASIDERPVATGIGLEFM 57
           R ++I+ FP VQ LDV GP +VFA  + L+E       Y   + +++  P+ T  GL  M
Sbjct: 6   RSILILAFPRVQLLDVSGPLQVFASVNELAEERGQPAPYAPRVVAVEAGPIETSSGLVVM 65

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L   + P DTV++ GG GV AA  +  ++ W                  FL AEAGL
Sbjct: 66  ADSLRSAARP-DTVIVAGGKGVRAASQDARMVRWVRQQARRARRVASVCTGAFLLAEAGL 124

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THWA  D  A  +P V V+PDPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 125 LDGRRAVTHWARCDEFAARYPNVRVEPDPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 183

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A   AR LV++L+RPGGQ QF+A + M R       ++   I        S+  LA 
Sbjct: 184 RAVALDAARELVVFLKRPGGQAQFSAMLSMQRTD-DRFGELHAWIAEHLTADLSVPALAE 242

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R +MS R F R +    G  P + VE++R EAA+R L ET   V  IA RCGFG+ ET+R
Sbjct: 243 RVSMSERSFVRHYRAGTGRTPARAVEQIRVEAAQRLLGETAWPVKRIATRCGFGSEETLR 302

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP  YR+ F
Sbjct: 303 RSFVRVLGVSPQGYRERF 320


>tr|B9CCD5|B9CCD5_9BURK Tax_Id=513053 SubName:
           Full=DarR;[Burkholderia multivorans CGD2M]
          Length = 322

 Score =  235 bits (599), Expect = 6e-60
 Identities = 140/318 (44%), Positives = 183/318 (57%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGG----YDVALASIDERPVATGIGLEFM 57
           R ++I+ FP  Q LDV GP +VFA  + L+ E G    Y   + + D  PV T  G+  +
Sbjct: 5   RPILILAFPRAQLLDVSGPLQVFASVNELALERGRPAPYVPRIVAADAGPVETSSGVAVV 64

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L   +  +DT+++ GG GV AA  +  L+ W                  FL AEAGL
Sbjct: 65  ADSLRSAARAIDTLIVAGGKGVHAASRDARLVRWVRRQADRARRVASVCTGAFLLAEAGL 124

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THW   D LA  +P V V+ DPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 125 LDGRRAVTHWTRCDELAARYPNVRVEADPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 183

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A  VAR LV++L+RPGGQ QF+A + M R       ++   I        S+  LA 
Sbjct: 184 RAVALDVARELVVFLKRPGGQAQFSAMLSMQRTD-DRFGELHAWIAEHLSADLSVPALAE 242

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           RA MS R F R +    G  P + VE++R EAA+R L ET   V  IAARCGFG+ ET+R
Sbjct: 243 RARMSERSFVRHYRASTGRTPARAVEQIRVEAAQRLLGETGWPVKRIAARCGFGSEETLR 302

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP +YR+ F
Sbjct: 303 RSFVRVLGVSPQEYRERF 320


>tr|B9BTM2|B9BTM2_9BURK Tax_Id=513052 SubName:
           Full=DarR;[Burkholderia multivorans CGD2]
          Length = 322

 Score =  235 bits (599), Expect = 6e-60
 Identities = 140/318 (44%), Positives = 183/318 (57%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGG----YDVALASIDERPVATGIGLEFM 57
           R ++I+ FP  Q LDV GP +VFA  + L+ E G    Y   + + D  PV T  G+  +
Sbjct: 5   RPILILAFPRAQLLDVSGPLQVFASVNELALERGRPAPYVPRIVAADAGPVETSSGVAVV 64

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L   +  +DT+++ GG GV AA  +  L+ W                  FL AEAGL
Sbjct: 65  ADSLRSAARAIDTLIVAGGKGVHAASRDARLVRWVRRQADRARRVASVCTGAFLLAEAGL 124

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THW   D LA  +P V V+ DPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 125 LDGRRAVTHWTRCDELAARYPNVRVEADPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 183

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A  VAR LV++L+RPGGQ QF+A + M R       ++   I        S+  LA 
Sbjct: 184 RAVALDVARELVVFLKRPGGQAQFSAMLSMQRTD-DRFGELHAWIAEHLSADLSVPALAE 242

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           RA MS R F R +    G  P + VE++R EAA+R L ET   V  IAARCGFG+ ET+R
Sbjct: 243 RARMSERSFVRHYRASTGRTPARAVEQIRVEAAQRLLGETGWPVKRIAARCGFGSEETLR 302

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP +YR+ F
Sbjct: 303 RSFVRVLGVSPQEYRERF 320


>tr|A4JHK9|A4JHK9_BURVG Tax_Id=269482 SubName: Full=Transcriptional
           regulator, AraC family with amidase-like
           domain;[Burkholderia vietnamiensis]
          Length = 322

 Score =  233 bits (595), Expect = 2e-59
 Identities = 139/318 (43%), Positives = 179/318 (56%), Gaps = 8/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSE-----GGYDVALASIDERPVATGIGLEFM 57
           R +V++ FP  Q LDV GP +VFA  + L++       Y   + + D  PV T  GL  M
Sbjct: 6   RSIVVLAFPRAQLLDVSGPLQVFASVNELAQERGQPAPYAPRVVAADGGPVETSAGLVVM 65

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L     P DTV++ GG GV AA  +   + W                  FL AEAGL
Sbjct: 66  ADSLRSAGRP-DTVIVAGGKGVHAASRDARTVRWVRRQAQHARRVASVCTGAFLLAEAGL 124

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THWA  D  A  +P V V+PDPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 125 LDGRRAVTHWARCDEFAARYPNVRVEPDPIFIRDGA-LWTSAGVTAGIDLALALVEEDLG 183

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             IA   AR LV++L+RPGGQ QF+A + M R       ++   I        S+  LA 
Sbjct: 184 RAIALDAARELVVFLKRPGGQAQFSAMLSMQRTD-DRFGELHAWIAEHLAADLSVPALAE 242

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R +MS R F R +    G  P + VE++R EAA+R L ET+  +  IA RCGFG+ ET+R
Sbjct: 243 RVSMSERSFVRHYRAGTGRTPARAVEQIRIEAAQRLLGETDWPIKRIATRCGFGSEETLR 302

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP  YR+ F
Sbjct: 303 RSFVRVLGVSPQGYRERF 320


>tr|C7CHN9|C7CHN9_METED Tax_Id=661410 SubName: Full=Putative
           bifunctional protein; N-terminal amidase, C-terminal
           transcriptional regulator, AraC family;[Methylobacterium
           extorquens]
          Length = 324

 Score =  233 bits (595), Expect = 2e-59
 Identities = 133/314 (42%), Positives = 182/314 (57%), Gaps = 7/314 (2%)

Query: 7   IVGFPGVQPLDVVGPFEVFAGAS--LLSEGG---YDVALASIDERPVATGIGLEFMTTRL 61
           ++ FPGVQ LDV GP +VFA A+  +  +G    Y + + +     VA+  GL      L
Sbjct: 3   VLAFPGVQVLDVTGPLQVFASANEHVARDGDGPPYRLRVVAKSGGAVASSAGLTLAVEPL 62

Query: 62  PDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDGC 121
                 VDT+++ GG GVDAA  +  L++W                  F+ A +G+LDG 
Sbjct: 63  TPMPEAVDTLIVAGGPGVDAAAGDPELLEWLRRRTAQARRVASVCTGAFILAASGILDGR 122

Query: 122 RATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEIA 181
           RA THW++ D  AR FPAV V+ DPIF+R  P VWT+AGVTAGIDLALALVE D G E A
Sbjct: 123 RAVTHWSYCDAFARRFPAVRVEADPIFVRDGP-VWTSAGVTAGIDLALALVEADLGRETA 181

Query: 182 QTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAAM 241
             VAR+LV++L+RPGGQ QF+A + + + +      +   +    G   S+  L+  A M
Sbjct: 182 LAVARYLVVFLKRPGGQAQFSAALSL-QTEGDRFDALHRWMRTNLGADLSLSALSAEAGM 240

Query: 242 SPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNFI 301
           S R F+R +  E G  P + VER+R EAAR+ L ET   +  IA+ CGF + ETMRR+F+
Sbjct: 241 SERSFSRHYLKETGLTPARAVERLRVEAARQMLAETHRPIKRIASHCGFASEETMRRSFL 300

Query: 302 RRVGISPDQYRKAF 315
           R +  +P  YR  F
Sbjct: 301 RLLASTPQDYRSRF 314


>tr|C5AWJ8|C5AWJ8_METEA Tax_Id=272630 SubName: Full=Putative
           bifunctional protein; N-terminal amidase, C-terminal
           transcriptional regulator, AraC family;[Methylobacterium
           extorquens]
          Length = 324

 Score =  233 bits (594), Expect = 2e-59
 Identities = 134/314 (42%), Positives = 181/314 (57%), Gaps = 7/314 (2%)

Query: 7   IVGFPGVQPLDVVGPFEVFAGAS--LLSEGG---YDVALASIDERPVATGIGLEFMTTRL 61
           ++ FPGVQ LDV GP +VFA A+  +  +G    Y + + +     VA+  GL      L
Sbjct: 3   VLAFPGVQVLDVTGPLQVFASANEHVARDGDGPPYRLRVVAKSGDAVASSAGLTLAAEPL 62

Query: 62  PDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDGC 121
                 VDT+++ GG GVDAA  +  L++W                  F+ A +G+LDG 
Sbjct: 63  TPMPEAVDTLIVAGGPGVDAAAGDPELIEWLRRRTAQARRVASVCTGAFILAASGILDGR 122

Query: 122 RATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEIA 181
           RA THW++ D  AR FPAV V+ DPIF+R  P VWT+AGVTAGIDLALALVE D G E A
Sbjct: 123 RAVTHWSYCDAFARRFPAVRVEADPIFVRDGP-VWTSAGVTAGIDLALALVEADLGRETA 181

Query: 182 QTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAAM 241
             VAR+LV++L+RPGGQ QF+A + + + +      +   +    G   S+  LA  A M
Sbjct: 182 LAVARYLVVFLKRPGGQAQFSAALSL-QTEGDRFDALHRWMRVNLGADLSLSALAAEAGM 240

Query: 242 SPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNFI 301
           S R F+R +  E G  P + VER+R EAAR+ L ET   +  IA  CGF + ETMRR+F+
Sbjct: 241 SERSFSRHYLKETGLTPARAVERLRVEAARQMLAETHRPIKRIAHHCGFASEETMRRSFL 300

Query: 302 RRVGISPDQYRKAF 315
           R +  +P  YR  F
Sbjct: 301 RLLASTPQDYRSRF 314


>tr|B1M6I7|B1M6I7_METRJ Tax_Id=426355 SubName: Full=Transcriptional
           regulator, AraC family;[Methylobacterium radiotolerans]
          Length = 327

 Score =  233 bits (594), Expect = 2e-59
 Identities = 137/315 (43%), Positives = 176/315 (55%), Gaps = 4/315 (1%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGG--YDVALASIDERPVATGIGLEFMTTR 60
           R V ++ FP VQ LDV GP +VFA A+     G  Y   + +  +  +    GL  +   
Sbjct: 13  RPVEVLAFPSVQLLDVAGPLQVFATANEHGGAGMPYAPRVIAAGDPGLTASAGLRLVADP 72

Query: 61  LPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDG 120
           LPDP APVDT+V+ GG GV AA D+ AL+ W                  FL   AGLLDG
Sbjct: 73  LPDPHAPVDTLVIAGGPGVVAACDDAALVAWVRTRAGRARRVASVCTGAFLLGAAGLLDG 132

Query: 121 CRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEI 180
            RA THW     LA  +    ++PDPIF+R  P VW++AGVTAGIDLALALVE D G   
Sbjct: 133 RRAVTHWKHCGALAARYRRARIEPDPIFVRDGP-VWSSAGVTAGIDLALALVEEDLGRAT 191

Query: 181 AQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAA 240
           A  VAR LV++L+RPGGQ QF+A + + +A       +   I     G  S+  LA  A 
Sbjct: 192 ALAVARHLVMFLKRPGGQAQFSAALAL-QAGEERFGRLHAYIADNLSGDLSLPALAAAAG 250

Query: 241 MSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNF 300
           MS R  +R +    G  P + VER+R EAARR L ET   +  +A  CGFG+ ETMRR+F
Sbjct: 251 MSARSLSRHYREATGLTPARAVERLRVEAARRALAETAQPIKRVARTCGFGSEETMRRSF 310

Query: 301 IRRVGISPDQYRKAF 315
           +R V  +P +YR  F
Sbjct: 311 LRHVAATPQEYRARF 325


>tr|B1FDI7|B1FDI7_9BURK Tax_Id=396596 SubName: Full=Transcriptional
           regulator, AraC family;[Burkholderia ambifaria IOP40-10]
          Length = 322

 Score =  233 bits (594), Expect = 2e-59
 Identities = 139/318 (43%), Positives = 180/318 (56%), Gaps = 8/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSE-----GGYDVALASIDERPVATGIGLEFM 57
           R ++I+ FP  Q LDV GP +VFA  + L+E       Y   + + +  P+ T  GL  M
Sbjct: 6   RSILILAFPRAQLLDVSGPLQVFASVNELAEERGQPAPYAPRVVAAEAGPLETSAGLVVM 65

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L     P DTV++ GG GV AA  +V ++ W                  FL AEAGL
Sbjct: 66  ADSLRSAGRP-DTVIVAGGKGVRAASQDVRMVRWVRQQAQRARRVASVCTGAFLLAEAGL 124

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THWA  D  A  +P V V+PDPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 125 LDGRRAVTHWARCDEFAARYPNVRVEPDPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 183

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A   AR LV++L+RPGGQ QF+A + M R       ++   I        S+  LA 
Sbjct: 184 RAVALDAARELVVFLKRPGGQAQFSAMLSMQRTD-DRFGELHAWIAEHLTADLSVPALAE 242

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R +MS R F R +    G  P + VE++R EAA+R L ET   V  IA RCGFG+ ET+R
Sbjct: 243 RVSMSERSFVRHYRAGTGRTPARAVEQIRVEAAQRLLGETAWPVKRIATRCGFGSEETLR 302

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP  YR+ F
Sbjct: 303 RSFVRVLGVSPQGYRERF 320


>tr|B6A033|B6A033_RHILW Tax_Id=395492 SubName: Full=Transcriptional
           regulator, AraC family;[Rhizobium leguminosarum bv.
           trifolii]
          Length = 341

 Score =  233 bits (593), Expect = 3e-59
 Identities = 134/316 (42%), Positives = 187/316 (59%), Gaps = 8/316 (2%)

Query: 4   KVVIVGFPGVQPLDVVGPFEVF--AGASLLSEGGYDVALASIDERPVATGIG-LEFMTTR 60
           ++VI+  PGVQ LD+VGP EVF  A   L     YD+ + S    P  +G G L F+  R
Sbjct: 2   RIVILSPPGVQSLDIVGPAEVFWEAARRLGDMDAYDIQIMSTGA-PSVSGTGQLRFLADR 60

Query: 61  -LPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLD 119
            + DP  P+DT+++ G         +V  + W                  FL A AGLL+
Sbjct: 61  TIFDPDEPIDTLLVAGDPSFQTIDPDV--IAWLQRRVPMVRRFGSICTGVFLLAAAGLLE 118

Query: 120 GCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTE 179
           G + TTHW  AD+ AR+FPA+D+D D I+IR    + TAAGVT+GIDLAL+LVE DHG +
Sbjct: 119 GKKVTTHWECADKFARDFPAIDLDHDAIYIRDGALI-TAAGVTSGIDLALSLVEEDHGRD 177

Query: 180 IAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRA 239
           IA  VAR++V++++RPGGQ+QF+A +    ++   I+  QE + A  G P ++++LA + 
Sbjct: 178 IAMIVARYMVMFMKRPGGQSQFSAHLVGQMSETTLIQKAQEYVLANLGAPLAVDDLAQKI 237

Query: 240 AMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRN 299
            MS R+F RVF  E+G  P  +V   RT+AARR LE+T   +  IA  CGF     MRR 
Sbjct: 238 GMSKRNFARVFRRELGITPADFVTAARTDAARRLLEDTAQPLQKIATMCGFTDVNKMRRA 297

Query: 300 FIRRVGISPDQYRKAF 315
           F R +G+SP+ YR  F
Sbjct: 298 FTRTIGVSPNDYRCRF 313


>tr|B4V727|B4V727_9ACTO Tax_Id=465541 SubName: Full=Transcriptional
           regulator;[Streptomyces sp. Mg1]
          Length = 327

 Score =  233 bits (593), Expect = 3e-59
 Identities = 142/320 (44%), Positives = 183/320 (57%), Gaps = 8/320 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSEG--GYDVALASIDERPVATGIGLEFMTT- 59
           R+VVI  FP V  LDV GP EVFA A+  + G  GY V LA      VAT  G+  +   
Sbjct: 5   RRVVIAVFPDVDLLDVTGPAEVFALANRETGGTAGYRVQLAGRTGGAVATSAGVRLVADL 64

Query: 60  RLPDPSAPVDTVVLPGG----GGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEA 115
              +    +DT+++PG      G   AR +  +++W                   L A A
Sbjct: 65  SFAEVGGVLDTLLVPGAVDMHPGGPVARIDRDVVEWVKRAAPQARRVASVCAGAHLLAAA 124

Query: 116 GLLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGD 175
           GLLDG  ATTHW+ A +LA + PAV VDPDPIF+RS  KVWT AG++A +DLALALV  D
Sbjct: 125 GLLDGRTATTHWSTAAQLAADHPAVTVDPDPIFVRSG-KVWTGAGISACMDLALALVAED 183

Query: 176 HGTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEEL 235
            G E+A  VAR LV+YL+R GGQ+QF+ P+  P A R  I +++  I     G  S   L
Sbjct: 184 LGEEVALAVARQLVMYLKRQGGQSQFSVPLSRPPASRRDIDELRMFIADHLDGDLSAAAL 243

Query: 236 AHRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAET 295
           A R  +S RHF RVF  E G +P  YVE  R EAARR LE T+  +  +AA CGFG+ ET
Sbjct: 244 AGRMCLSERHFARVFRQETGTSPASYVEAARVEAARRLLESTDQALDEVAAGCGFGSVET 303

Query: 296 MRRNFIRRVGISPDQYRKAF 315
           + R   +++G SP  YR+ F
Sbjct: 304 LHRALRKQIGTSPAAYRRRF 323


>tr|A2W7P4|A2W7P4_9BURK Tax_Id=350701 SubName: Full=Transcriptional
           regulator;[Burkholderia dolosa AUO158]
          Length = 347

 Score =  232 bits (592), Expect = 4e-59
 Identities = 140/318 (44%), Positives = 181/318 (56%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGG----YDVALASIDERPVATGIGLEFM 57
           R ++++ FP  Q LDV GP +VFA  + L+ E G    Y   + + D  P+ T  GL  M
Sbjct: 30  RSILVLAFPRAQLLDVSGPLQVFASVNELALERGQPAPYAPRVVAADAGPIETSSGLVVM 89

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L   +   DTV++ GG GV AA  +  L+ W                  FL AEAGL
Sbjct: 90  ADSLRAAARRPDTVIVAGGKGVHAASKDARLVRWVRQQAQRARRVASVCTGAFLLAEAGL 149

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THW   D LA  +P V V+ DPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 150 LDGRRAVTHWTRCDELAARYPNVRVEADPIFIREGT-LWTSAGVTAGIDLALALVEEDLG 208

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A   AR LV++L+RPGGQ QF+A + M RA+     ++   I        S+  LA 
Sbjct: 209 RAVALDAARELVVFLKRPGGQAQFSAMLSMQRAE-DRFGELHAWIAEHLNADLSVPALAE 267

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R  MS R F R +    G  P + VE++R EAA+R L ET   V  IAARCGFG+ ET+R
Sbjct: 268 RMRMSERSFVRHYRAGTGRTPARAVEQIRVEAAQRLLGETAWPVKRIAARCGFGSEETLR 327

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP  YR+ F
Sbjct: 328 RSFLRVLGVSPQAYRERF 345


>tr|B1MM37|B1MM37_MYCA9 Tax_Id=561007 SubName: Full=Putative
           transcription regulator, AraC family;[Mycobacterium
           abscessus]
          Length = 319

 Score =  232 bits (591), Expect = 5e-59
 Identities = 138/313 (44%), Positives = 184/313 (58%), Gaps = 3/313 (0%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGGYDVALASIDERPVATGIGLEFMTTRLP 62
           R + IV F G++ LD+ GP EVFA A+      Y + +AS+D R V+T IG  F  T   
Sbjct: 5   RLITIVVFDGMKLLDLAGPAEVFAEANRFG-ANYRLVVASVDGRDVSTSIGSPFSVTETI 63

Query: 63  DPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLDGCR 122
           D     DTV++ GG  +  +  N  L+                    FL A+AG+LD  R
Sbjct: 64  DSIECADTVLVAGGDVLIGSPLNPTLVAALAQLQARCRRIASICTGAFLLAQAGMLDHRR 123

Query: 123 ATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTEIAQ 182
           ATTHW     L R FP V V+PD IF+R +  V+T+AGV+AGIDLALALVE DHG+E+ +
Sbjct: 124 ATTHWRHTGLLQRAFPNVTVEPDAIFVRDA-NVFTSAGVSAGIDLALALVEDDHGSEMVR 182

Query: 183 TVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRAAMS 242
            VAR LV+YL+R GGQ+QF+  V        ++R   +AI A P   HS+ +LA RAA+S
Sbjct: 183 DVARSLVVYLKRAGGQSQFSVFVESALPTGSALRPATDAIAADPAADHSVAKLAARAALS 242

Query: 243 PRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRNFIR 302
            R  TR+F  E+G  P +YVE VR +AAR  L +   TV   A   GFG+AET+RR F+ 
Sbjct: 243 ARQLTRLFHSELGTTPARYVELVRIDAARGAL-DAGSTVTEAARIAGFGSAETLRRAFVS 301

Query: 303 RVGISPDQYRKAF 315
            +G+SP  YR+ F
Sbjct: 302 ELGVSPKAYRERF 314


>tr|B1T2K8|B1T2K8_9BURK Tax_Id=396597 SubName: Full=Transcriptional
           regulator, AraC family;[Burkholderia ambifaria MEX-5]
          Length = 322

 Score =  231 bits (590), Expect = 7e-59
 Identities = 139/318 (43%), Positives = 180/318 (56%), Gaps = 8/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSE-----GGYDVALASIDERPVATGIGLEFM 57
           R ++I+ FP  Q LDV GP +VFA  + L+E       Y   + + +  P+ T  GL  M
Sbjct: 6   RSILILAFPRAQLLDVSGPLQVFASVNELAEERGQPAPYAPRVVAAEAGPLETSSGLVVM 65

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L     P DTV++ GG GV AA  +V ++ W                  FL AEAGL
Sbjct: 66  ADSLRSAGRP-DTVIVAGGKGVRAASQDVRMVRWVRQQAQRARRVASVCTGAFLLAEAGL 124

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THWA  D  A  +P V V+PDPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 125 LDGRRAVTHWARCDEFAARYPNVRVEPDPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 183

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A   AR LV++L+RPGGQ QF+A + M R       ++   I        S+  LA 
Sbjct: 184 RAVALDAARELVVFLKRPGGQAQFSAMLSMQRTD-DRFGELHAWIAEHLTVDLSVPALAE 242

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R +MS R F R +    G  P + VE++R EAA+R L ET   V  IA RCGFG+ ET+R
Sbjct: 243 RVSMSERSFVRHYRAGTGRTPARAVEQIRVEAAQRLLGETAWPVKRIATRCGFGSEETLR 302

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP  YR+ F
Sbjct: 303 RSFVRVLGVSPQGYRERF 320


>tr|Q0BC63|Q0BC63_BURCM Tax_Id=339670 SubName: Full=Transcriptional
           regulator, AraC family with amidase-like
           domain;[Burkholderia ambifaria]
          Length = 322

 Score =  231 bits (589), Expect = 8e-59
 Identities = 138/318 (43%), Positives = 179/318 (56%), Gaps = 8/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLSE-----GGYDVALASIDERPVATGIGLEFM 57
           R ++I+ FP  Q LDV GP +VFA  + L+E       Y   + + +  P+ T  GL  M
Sbjct: 6   RSILILAFPRAQLLDVSGPLQVFASVNELAEERGQPAPYAPRVVAAEAGPIETSSGLVVM 65

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L     P DTV++ GG GV AA  +  ++ W                  FL AEAGL
Sbjct: 66  ADSLRSAGRP-DTVIVAGGKGVRAASQDARMVRWVRQQGQRARRVASVCTGAFLLAEAGL 124

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THWA  D  A  +P V V+PDPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 125 LDGRRAVTHWARCDEFAARYPNVRVEPDPIFIREGG-LWTSAGVTAGIDLALALVEEDLG 183

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A   AR LV++L+RPGGQ QF+A + M R       ++   I        S+  LA 
Sbjct: 184 RAVALDAARELVVFLKRPGGQAQFSAMLSMQRTD-DRFGELHAWIADHLTADLSVPALAE 242

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R +MS R F R +    G  P + VE++R EAA+R L ET   V  IA RCGFG+ ET+R
Sbjct: 243 RVSMSERSFVRHYRAGTGRTPARAVEQIRVEAAQRLLGETAWPVKRIATRCGFGSEETLR 302

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP  YR+ F
Sbjct: 303 RSFVRVLGVSPQGYRERF 320


>tr|B1JY22|B1JY22_BURCC Tax_Id=406425 SubName: Full=Transcriptional
           regulator, AraC family;[Burkholderia cenocepacia]
          Length = 324

 Score =  231 bits (589), Expect = 8e-59
 Identities = 138/318 (43%), Positives = 181/318 (56%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGG----YDVALASIDERPVATGIGLEFM 57
           R ++I+ FP  Q LDV GP +VFA  + L+ E G    Y   + +++  PV T  GL  M
Sbjct: 7   RSILILAFPRAQLLDVTGPLQVFASVNELALERGQPAPYAPRVVAVEAGPVETSSGLVVM 66

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L   +   DT+++ GG GV AA  +  ++ W                  FL AEAGL
Sbjct: 67  AESLRAAARRPDTLIVAGGKGVHAASKDARVVRWVRQQAGRARRVASVCTGAFLLAEAGL 126

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THWA  D  A  +P V V+PDPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 127 LDGRRAVTHWARCDEFAARYPNVRVEPDPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 185

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
              A  VAR LV++L+RPGGQ QF+  + M R       ++   +        S+  LA 
Sbjct: 186 RATALDVARELVVFLKRPGGQAQFSTMLSMQRTA-DRFGELHAWMAEHLTADLSVPALAE 244

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R +MS R F R +  E G  P + VE++R EAA+R L ET   V  IA RCGFG+ ET+R
Sbjct: 245 RVSMSERSFVRHYRAETGRTPARAVEQIRVEAAQRLLGETAWPVKRIAGRCGFGSEETLR 304

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP  YR+ F
Sbjct: 305 RSFVRVLGVSPQGYRERF 322


>tr|Q1BTV8|Q1BTV8_BURCA Tax_Id=331271 SubName: Full=Transcriptional
           regulator, AraC family with amidase-like
           domain;[Burkholderia cenocepacia]
          Length = 324

 Score =  231 bits (588), Expect = 1e-58
 Identities = 137/318 (43%), Positives = 181/318 (56%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGG----YDVALASIDERPVATGIGLEFM 57
           R ++++ FP  Q LDV GP +VFA  + L+ E G    Y   + +++  PV T  GL  M
Sbjct: 7   RSILVLAFPRAQLLDVTGPLQVFASVNELALERGQPAPYAPRVVAVEAGPVETSSGLVVM 66

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L   +   DT+++ GG GV AA  +  ++ W                  FL AEAGL
Sbjct: 67  AESLRAAARRPDTLIVAGGKGVHAASKDARVVRWVRQQAGRARRVASVCTGAFLLAEAGL 126

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THWA  D  A  +P V V+PDPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 127 LDGRRAVTHWARCDEFAARYPNVRVEPDPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 185

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
              A  VAR LV++L+RPGGQ QF+  + M R       ++   +        S+  LA 
Sbjct: 186 RATALDVARELVVFLKRPGGQAQFSTMLSMQRTA-DRFGELHAWMAEHLTADLSVPALAE 244

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R +MS R F R +  E G  P + VE++R EAA+R L ET   V  IA RCGFG+ ET+R
Sbjct: 245 RVSMSERSFVRHYRAETGRTPARAVEQIRVEAAQRLLGETTWPVKRIAGRCGFGSEETLR 304

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP  YR+ F
Sbjct: 305 RSFVRVLGVSPQGYRERF 322


>tr|B8IS26|B8IS26_METNO Tax_Id=460265 SubName: Full=Transcriptional
           regulator, AraC family;[Methylobacterium nodulans]
          Length = 338

 Score =  231 bits (588), Expect = 1e-58
 Identities = 141/319 (44%), Positives = 182/319 (57%), Gaps = 8/319 (2%)

Query: 2   ARKVVIVGFPGVQPLDVVGPFEVFAGAS-LLSEGGYDVALASI---DERPVATGIGLEFM 57
           AR++ I+ FP VQ LDV GP +VF+ A+ + + GG  +  A      E  V +  GL   
Sbjct: 20  ARRIEILAFPDVQLLDVAGPLQVFSTANDIAAAGGAPLPYAPTVVAAEASVTSTAGLALA 79

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
           T  LP   AP+ T+++ GG GVDA  ++ AL+ W                  F+ A AGL
Sbjct: 80  TEPLPPADAPLHTLMVAGGRGVDAVSEDPALLAWVRRRADAAIRTASVCSGAFVLAGAGL 139

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THW    + A  FPAV +DPDPIF+R    VWT+AGVTAGIDLALALVE D G
Sbjct: 140 LDGRRAVTHWGRCAQFAARFPAVRLDPDPIFVRDG-SVWTSAGVTAGIDLALALVEDDLG 198

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
              A  VAR LV++L+RPGGQ QF+  + +  A R     +   I        S+  LA 
Sbjct: 199 RATALAVARQLVIFLKRPGGQAQFSTLLALQEAGR--FDRLHAWIAENLRADLSLAALAD 256

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           RAAMS R F+R +    G  P + VE +R EAARR LE+    V   AA+CGFG+ ETMR
Sbjct: 257 RAAMSARSFSRHYRQATGRTPARAVEEIRVEAARRLLEQGA-PVARAAAQCGFGSEETMR 315

Query: 298 RNFIRRVGISPDQYRKAFA 316
           R F+R +G  P  YR+ F+
Sbjct: 316 RGFLRVIGTGPRAYRERFS 334


>tr|B8IA36|B8IA36_METNO Tax_Id=460265 SubName: Full=Transcriptional
           regulator, AraC family;[Methylobacterium nodulans]
          Length = 328

 Score =  231 bits (588), Expect = 1e-58
 Identities = 137/322 (42%), Positives = 184/322 (57%), Gaps = 10/322 (3%)

Query: 1   MARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGG---YDVALASIDERPVATGIG---L 54
           + R V ++  PGVQ LDV GP +VFA A+  ++ G   YD+A+      PV T  G   +
Sbjct: 6   VVRSVAVLALPGVQLLDVAGPLDVFAEAN--TQAGTTIYDLAVVGTRPGPVETSSGRCLV 63

Query: 55  EFMTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAE 114
             +     DP A  DT+++ G   +   + + AL  W                  FL  +
Sbjct: 64  ADLVAGAEDP-AGFDTLLVAGAPRIHELQADAALCAWLASAALKSRRYGSVCSGAFLLGQ 122

Query: 115 AGLLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEG 174
           AGLL G R TTHWA AD LAR +P   VD D I +   P V TAAGVTAG+DLALALV+ 
Sbjct: 123 AGLLQGRRVTTHWAVADSLARRYPEAVVDGDAICLFDGP-VRTAAGVTAGLDLALALVDE 181

Query: 175 DHGTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEE 234
           D G+E+A+ VA  LV+Y +R GGQ QF+       A R ++++VQ  + A P   H + +
Sbjct: 182 DLGSEVARRVASQLVMYFKRGGGQMQFSRRGVGAPAGRSALQEVQRWVAAHPAADHGVAK 241

Query: 235 LAHRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAE 294
           LA RA MSPRHF R+F  E G  P  +VE VR EAARR LEE +     +A  CGF  A+
Sbjct: 242 LAARAGMSPRHFARLFRAETGLTPATFVENVRIEAARRLLEEGKAASKQVAGACGFHDAD 301

Query: 295 TMRRNFIRRVGISPDQYRKAFA 316
           T+RR F+RR+G++P +YR+  A
Sbjct: 302 TLRRAFVRRIGLTPAEYRQRHA 323


>tr|A0KA80|A0KA80_BURCH Tax_Id=331272 SubName: Full=Transcriptional
           regulator, AraC family with amidase-like
           domain;[Burkholderia cenocepacia]
          Length = 324

 Score =  231 bits (588), Expect = 1e-58
 Identities = 137/318 (43%), Positives = 181/318 (56%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGG----YDVALASIDERPVATGIGLEFM 57
           R ++++ FP  Q LDV GP +VFA  + L+ E G    Y   + +++  PV T  GL  M
Sbjct: 7   RSILVLAFPRAQLLDVTGPLQVFASVNELALERGQPAPYAPRVVAVEAGPVETSSGLVVM 66

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L   +   DT+++ GG GV AA  +  ++ W                  FL AEAGL
Sbjct: 67  AESLRAAARRPDTLIVAGGKGVHAASKDARVVRWVRQQAGRARRVASVCTGAFLLAEAGL 126

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THWA  D  A  +P V V+PDPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 127 LDGRRAVTHWARCDEFAARYPNVRVEPDPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 185

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
              A  VAR LV++L+RPGGQ QF+  + M R       ++   +        S+  LA 
Sbjct: 186 RATALDVARELVVFLKRPGGQAQFSTMLSMQRTA-DRFGELHAWMAEHLTADLSVPALAE 244

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R +MS R F R +  E G  P + VE++R EAA+R L ET   V  IA RCGFG+ ET+R
Sbjct: 245 RVSMSERSFVRHYRAETGRTPARAVEQIRVEAAQRLLGETTWPVKRIAGRCGFGSEETLR 304

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP  YR+ F
Sbjct: 305 RSFVRVLGVSPQGYRERF 322


>tr|B5WFX0|B5WFX0_9BURK Tax_Id=516466 SubName: Full=Transcriptional
           regulator, AraC family;[Burkholderia sp. H160]
          Length = 324

 Score =  231 bits (588), Expect = 1e-58
 Identities = 130/319 (40%), Positives = 188/319 (58%), Gaps = 7/319 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGAS-LLSEGGYDVALA----SIDERPVATGIGLEFM 57
           R +V++ FP +Q LDV GP +VFA A+ L+++ G D   A    + +  PV T  G+  +
Sbjct: 6   RSIVLLAFPNMQLLDVSGPLQVFASANELVAQRGLDKLYAPRVVAAEAGPVTTSSGVAVL 65

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L     P+DT+++PGG G+  A  +  L+ W                  FL AEAGL
Sbjct: 66  AGSLRSAKGPLDTLIVPGGRGIREASADPRLIRWTQRQAPHCRRVASVCSGAFLLAEAGL 125

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG R  THW   D L + +P + V+ DPIFIR    +WT+AGVTAGIDLALA++E DHG
Sbjct: 126 LDGRRVATHWGRCDELTQAYPQLRVEADPIFIRDGA-IWTSAGVTAGIDLALAMLEEDHG 184

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
             +A  VAR LV++L+RPGGQ+QF+A + +  A      ++   + +      S+  LA 
Sbjct: 185 RALALDVARELVVFLKRPGGQSQFSAMLSLQDAD-DRFGELHAWMTSHLASDLSVPTLAR 243

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R  MS R F R +  + G  P + VE++R EAA+R L ET  ++  IAARCGFG+ ETMR
Sbjct: 244 RLHMSERSFMRHYKAQTGRTPARAVEQLRVEAAQRLLSETSWSIKRIAARCGFGSEETMR 303

Query: 298 RNFIRRVGISPDQYRKAFA 316
            +F+R++ ++P  YR+ F+
Sbjct: 304 CSFVRQLRVAPQVYRERFS 322


>tr|B4EBX5|B4EBX5_BURCJ Tax_Id=216591 SubName: Full=AraC family
           regulatory protein;[Burkholderia cepacia]
          Length = 338

 Score =  229 bits (585), Expect = 2e-58
 Identities = 136/318 (42%), Positives = 181/318 (56%), Gaps = 7/318 (2%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGG----YDVALASIDERPVATGIGLEFM 57
           R ++++ FP  Q LDV GP +VFA  + L+ E G    Y   + +++  PV T  GL  M
Sbjct: 21  RSILVLAFPRAQLLDVTGPLQVFASVNELALERGQPAPYAPRVVAVEAGPVETSSGLVVM 80

Query: 58  TTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGL 117
              L   +   DT+++ GG GV AA  +  ++ W                  FL AEAGL
Sbjct: 81  AESLRAAARHPDTLIVAGGKGVHAASKDARMVRWVRQQAGRARRVASVCTGAFLLAEAGL 140

Query: 118 LDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHG 177
           LDG RA THWA  D  A  +P V V+PDPIFIR    +WT+AGVTAGIDLALALVE D G
Sbjct: 141 LDGRRAVTHWARCDEFAARYPNVRVEPDPIFIREGA-LWTSAGVTAGIDLALALVEEDLG 199

Query: 178 TEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAH 237
              A  VAR LV++L+RPGGQ QF+  + M R       ++   +        S+  LA 
Sbjct: 200 RATALDVARELVVFLKRPGGQAQFSTMLSMQRTA-DRFGELHAWMAEHLTADLSVPALAE 258

Query: 238 RAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMR 297
           R +MS R F R +    G  P + VE++R EAA+R L ET  +V  IA RCGFG+ ET+R
Sbjct: 259 RVSMSERSFVRHYRAATGRTPARAVEQIRVEAAQRLLGETAWSVKRIAGRCGFGSEETLR 318

Query: 298 RNFIRRVGISPDQYRKAF 315
           R+F+R +G+SP  YR+ F
Sbjct: 319 RSFVRVLGVSPQGYRERF 336


>tr|B7KRZ3|B7KRZ3_METC4 Tax_Id=440085 SubName: Full=Transcriptional
           regulator, AraC family;[Methylobacterium
           chloromethanicum]
          Length = 321

 Score =  229 bits (584), Expect = 3e-58
 Identities = 134/317 (42%), Positives = 178/317 (56%), Gaps = 4/317 (1%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGGYDVALASIDERPVATGIGLEFMTTRL 61
           R + I+  PGVQ LDV GP +VFA A+  + E  YD+A+  I   P+ T  G   +   +
Sbjct: 4   RHIAILALPGVQLLDVAGPLDVFAEANAQAGEAVYDLAVVGIQAGPIITSSGRGLIADAV 63

Query: 62  PDPSAPV--DTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLD 119
               AP   DT+++ G   +        L+ W                  FL  +AGLL+
Sbjct: 64  APSVAPTSFDTLLVAGAPRIHELDLQADLLAWLGQVAKHSRRYGSVCSGAFLLGQAGLLN 123

Query: 120 GCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTE 179
           G RATTHWA AD LA  +P   ++PD I +    K+ TAAGVTAG+DLALALVE D G E
Sbjct: 124 GRRATTHWAVADALAARYPEALIEPDAICLFDG-KLRTAAGVTAGLDLALALVEEDLGAE 182

Query: 180 IAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRA 239
           IA+ VA  LV++ +R GGQ QF+         R ++++VQ  + A P   HSI  LA RA
Sbjct: 183 IARQVAAQLVMFFKRGGGQMQFSRRGLSAPVGRSALQEVQRWVAAHPADNHSIGRLAERA 242

Query: 240 AMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRN 299
            MSPRHF R+F  E G  P  YVE VR EA RR LE  +  +  +A  CGF  ++T+RR 
Sbjct: 243 GMSPRHFARLFRIETGLTPAAYVENVRIEAVRRLLERDDVALKQVAGACGFRDSDTLRRA 302

Query: 300 FIRRVGISPDQYRKAFA 316
           F+RRVG +P +YR+  A
Sbjct: 303 FVRRVGTTPAEYRRRHA 319


>tr|C7CJM3|C7CJM3_METED Tax_Id=661410 SubName: Full=Transcriptional
           regulator, AraC family;[Methylobacterium extorquens]
          Length = 340

 Score =  229 bits (584), Expect = 3e-58
 Identities = 134/317 (42%), Positives = 178/317 (56%), Gaps = 4/317 (1%)

Query: 3   RKVVIVGFPGVQPLDVVGPFEVFAGASLLS-EGGYDVALASIDERPVATGIGLEFMTTRL 61
           R + I+  PGVQ LDV GP +VFA A+  + E  YD+A+  I   P+ T  G   +   +
Sbjct: 23  RHIAILALPGVQLLDVAGPLDVFAEANAQAGEAVYDLAVVGIQAGPIITSSGRGLIADAV 82

Query: 62  PDPSAPV--DTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAGLLD 119
               AP   DT+++ G   +        L+ W                  FL  +AGLL+
Sbjct: 83  APSVAPTSFDTLLVAGAPRIHELDLQADLLAWLGQVAKHSRRYGSVCSGAFLLGQAGLLN 142

Query: 120 GCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDHGTE 179
           G RATTHWA AD LA  +P   ++PD I +    K+ TAAGVTAG+DLALALVE D G E
Sbjct: 143 GRRATTHWAVADALAARYPEALIEPDAICLFDG-KLRTAAGVTAGLDLALALVEEDLGAE 201

Query: 180 IAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELAHRA 239
           IA+ VA  LV++ +R GGQ QF+         R ++++VQ  + A P   HSI  LA RA
Sbjct: 202 IARQVAAQLVMFFKRGGGQMQFSRRGLSAPVGRSALQEVQRWVAAHPADNHSIGRLAERA 261

Query: 240 AMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETMRRN 299
            MSPRHF R+F  E G  P  YVE VR EA RR LE  +  +  +A  CGF  ++T+RR 
Sbjct: 262 GMSPRHFARLFRIETGLTPAAYVENVRIEAVRRLLERDDVALKQVAGACGFRDSDTLRRA 321

Query: 300 FIRRVGISPDQYRKAFA 316
           F+RRVG +P +YR+  A
Sbjct: 322 FVRRVGTTPAEYRRRHA 338


>tr|Q84H26|Q84H26_9PSED Tax_Id=86192 (darR)SubName:
           Full=DarR;[Pseudomonas chlororaphis subsp. aurantiaca]
          Length = 330

 Score =  228 bits (581), Expect = 7e-58
 Identities = 130/320 (40%), Positives = 186/320 (58%), Gaps = 7/320 (2%)

Query: 2   ARKVVIVGFPGVQPLDVVGPFEVFAGASLLSEGG-----YDVALASIDERPVATGIGLEF 56
           AR + ++ F   Q LDV GP +VFA A+ L+        Y V + +    PV T  GL  
Sbjct: 5   ARTIHVLTFANAQVLDVTGPLQVFASANDLARQKGLPPPYAVNVIAAGGGPVTTSAGLAL 64

Query: 57  MTTRLPDPSAPVDTVVLPGGGGVDAARDNVALMDWXXXXXXXXXXXXXXXXXXFLAAEAG 116
           +   LP P  P DT+V+ GG GV AA ++ AL+ W                  FL A +G
Sbjct: 65  LAEPLPAPGTPCDTLVIAGGWGVYAAAEDPALVAWVRQQAASARRVASVCTGAFLLAASG 124

Query: 117 LLDGCRATTHWAFADRLAREFPAVDVDPDPIFIRSSPKVWTAAGVTAGIDLALALVEGDH 176
            LDG R  THW   ++LAR++P + V+ +PIFI   P VWT+AGVTAGIDLALALVE D 
Sbjct: 125 WLDGRRVVTHWTRCEQLARQYPQLRVEANPIFINEGP-VWTSAGVTAGIDLALALVEADL 183

Query: 177 GTEIAQTVARWLVLYLRRPGGQTQFAAPVWMPRAKRPSIRDVQEAIEAQPGGPHSIEELA 236
           G  +A  VAR LV++L+RPGGQ+QF+A + + + +     D+   I    G   +I  LA
Sbjct: 184 GHAMALDVARQLVVFLKRPGGQSQFSATLALQK-QGSRFDDLHAWIAENLGRDLNIPTLA 242

Query: 237 HRAAMSPRHFTRVFTGEVGEAPRQYVERVRTEAARRQLEETEDTVVAIAARCGFGTAETM 296
            +  MS R F R +  + G+ P + +E++R E ARR L ++   +  IA +CGFG+ ET+
Sbjct: 243 AQVGMSERSFVRHYRADTGQTPARVIEQIRVENARRLLGDSCVPIKRIAVQCGFGSEETL 302

Query: 297 RRNFIRRVGISPDQYRKAFA 316
           RR+F+R +G++P  YR+ F+
Sbjct: 303 RRSFLRAMGVTPQAYRERFS 322


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.321    0.137    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 2,318,528,163
Number of extensions: 94967955
Number of successful extensions: 259669
Number of sequences better than 10.0: 14703
Number of HSP's gapped: 255185
Number of HSP's successfully gapped: 14737
Length of query: 316
Length of database: 3,846,993,858
Length adjustment: 137
Effective length of query: 179
Effective length of database: 2,302,291,047
Effective search space: 412110097413
Effective search space used: 412110097413
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)