BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_2873 (400 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HE33|B2HE33_MYCMM Tax_Id=216594 (mce3R)SubName: Full=Transc... 743 0.0 tr|A0PS42|A0PS42_MYCUA Tax_Id=362242 (mce3R)SubName: Full=Transc... 734 0.0 tr|Q7TZ70|Q7TZ70_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC... 637 0.0 tr|P95251|P95251_MYCTU Tax_Id=1773 (mce3R)SubName: Full=PROBABLE... 637 0.0 tr|C6DQC9|C6DQC9_MYCTK Tax_Id=478434 SubName: Full=TetR-family t... 637 0.0 tr|C1APP3|C1APP3_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 637 0.0 tr|A5U3Y2|A5U3Y2_MYCTA Tax_Id=419947 (mce3R)SubName: Full=TetR-f... 637 0.0 tr|A1KK29|A1KK29_MYCBP Tax_Id=410289 SubName: Full=Probable tran... 637 0.0 tr|A5WNT8|A5WNT8_MYCTF Tax_Id=336982 SubName: Full=Transcription... 637 0.0 tr|A4KIA5|A4KIA5_MYCTU Tax_Id=395095 SubName: Full=Transcription... 637 0.0 tr|A2VJ71|A2VJ71_MYCTU Tax_Id=348776 SubName: Full=Transcription... 637 0.0 tr|A1TC71|A1TC71_MYCVP Tax_Id=350058 SubName: Full=Transcription... 531 e-149 tr|Q0SBP1|Q0SBP1_RHOSR Tax_Id=101510 SubName: Full=Possible tran... 209 6e-52 tr|C3JEU7|C3JEU7_RHOER Tax_Id=596309 SubName: Full=Transcription... 183 4e-44 tr|C7MXS3|C7MXS3_SACVD Tax_Id=471857 SubName: Full=Transcription... 181 1e-43 tr|C0ZPE0|C0ZPE0_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR... 178 1e-42 tr|C3JMC4|C3JMC4_RHOER Tax_Id=596309 SubName: Full=Transcription... 177 3e-42 tr|A4FF46|A4FF46_SACEN Tax_Id=405948 SubName: Full=Transcription... 176 5e-42 tr|Q0SCC3|Q0SCC3_RHOSR Tax_Id=101510 SubName: Full=Probable tran... 161 2e-37 tr|C1B2J3|C1B2J3_RHOOB Tax_Id=632772 SubName: Full=Putative TetR... 160 3e-37 tr|C1AZZ6|C1AZZ6_RHOOB Tax_Id=632772 SubName: Full=Putative TetR... 152 7e-35 tr|Q0S3J6|Q0S3J6_RHOSR Tax_Id=101510 SubName: Full=Possible tran... 151 2e-34 tr|C0ZR71|C0ZR71_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR... 151 2e-34 tr|B5H6T4|B5H6T4_STRPR Tax_Id=457429 SubName: Full=Predicted pro... 150 2e-34 tr|C3JV27|C3JV27_RHOER Tax_Id=596309 SubName: Full=Transcription... 150 3e-34 tr|D0LBV0|D0LBV0_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr... 147 2e-33 tr|A4T2S0|A4T2S0_MYCGI Tax_Id=350054 SubName: Full=Transcription... 147 2e-33 tr|B5H6S3|B5H6S3_STRPR Tax_Id=457429 SubName: Full=Transcription... 146 4e-33 tr|C3JUJ2|C3JUJ2_RHOER Tax_Id=596309 SubName: Full=Transcription... 145 7e-33 tr|Q5YPJ5|Q5YPJ5_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 145 9e-33 tr|A3PTY4|A3PTY4_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 144 3e-32 tr|C0ZPN1|C0ZPN1_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR... 142 7e-32 tr|Q1BEK4|Q1BEK4_MYCSS Tax_Id=164756 SubName: Full=Transcription... 141 2e-31 tr|A1UAC9|A1UAC9_MYCSK Tax_Id=189918 SubName: Full=Transcription... 141 2e-31 tr|A0QQN0|A0QQN0_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 140 4e-31 tr|C7Q7V6|C7Q7V6_CATAD Tax_Id=479433 SubName: Full=Transcription... 140 4e-31 tr|Q5Z1X2|Q5Z1X2_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 138 1e-30 tr|Q2JA50|Q2JA50_FRASC Tax_Id=106370 SubName: Full=Transcription... 135 7e-30 tr|B2HQM2|B2HQM2_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 134 2e-29 tr|A4T394|A4T394_MYCGI Tax_Id=350054 SubName: Full=Transcription... 134 2e-29 tr|A0PTR9|A0PTR9_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 133 5e-29 tr|A1T307|A1T307_MYCVP Tax_Id=350058 SubName: Full=Transcription... 132 8e-29 tr|C0ZPB4|C0ZPB4_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR... 129 5e-28 tr|Q5YPJ4|Q5YPJ4_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 129 9e-28 tr|C2AJ19|C2AJ19_TSUPA Tax_Id=521096 SubName: Full=Transcription... 129 9e-28 tr|D0L6S8|D0L6S8_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr... 127 2e-27 tr|Q9X7X6|Q9X7X6_STRCO Tax_Id=1902 SubName: Full=Putative regula... 126 4e-27 tr|C9N5U7|C9N5U7_9ACTO Tax_Id=591167 SubName: Full=Transcription... 125 9e-27 tr|Q1BBT5|Q1BBT5_MYCSS Tax_Id=164756 SubName: Full=Transcription... 124 2e-26 tr|A1UD62|A1UD62_MYCSK Tax_Id=189918 SubName: Full=Transcription... 124 2e-26 >tr|B2HE33|B2HE33_MYCMM Tax_Id=216594 (mce3R)SubName: Full=Transcriptional repressor (Probably TetR-family) Mce3R;[Mycobacterium marinum] Length = 400 Score = 743 bits (1918), Expect = 0.0 Identities = 386/400 (96%), Positives = 386/400 (96%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL Sbjct: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS Sbjct: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECI GLVE Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIRALRANRQAAQRLRGLVE 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL Sbjct: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTSRS 400 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTSRS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTSRS 400 >tr|A0PS42|A0PS42_MYCUA Tax_Id=362242 (mce3R)SubName: Full=Transcriptional repressor (Probably TetR-family) Mce3R;[Mycobacterium ulcerans] Length = 400 Score = 734 bits (1895), Expect = 0.0 Identities = 383/400 (95%), Positives = 383/400 (95%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVL QREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLSQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL Sbjct: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS Sbjct: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECI GLVE Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIRALRANRQAAQRLRGLVE 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAVC TELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL Sbjct: 301 GHVRISLDAPDLVAVCATELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTSRS 400 LVAAAISFIEDVARTWHLTRYAAVADEIT IALSILTSRS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAAVADEITEIALSILTSRS 400 >tr|Q7TZ70|Q7TZ70_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis] Length = 406 Score = 637 bits (1643), Expect = 0.0 Identities = 330/398 (82%), Positives = 350/398 (87%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 M SV PVRRRPKDRK+QIL+QAVGLFI+RGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGE EPTPRPL+ DL DLIAAAVASR+LTVLWQREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 + DR VRRRINAIVAGMR+SVLLEVP LSP HSELRAWAVSSTLTSLGRHSL+LP EEL Sbjct: 121 EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 K+ LYQACMAAARTPPVCEL PL RD DVLFSRYETLLA GARLFRAQGYPAV+ Sbjct: 181 KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWR LECI GLV+ Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAV VTEL+HAS +VRDGYLRNQ DR+ +WIDLIG+LVP TS + RL Sbjct: 301 GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 LVAAAISFIEDVARTWHLTRYA VADEI+ +AL+ILTS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTS 398 >tr|P95251|P95251_MYCTU Tax_Id=1773 (mce3R)SubName: Full=PROBABLE TRANSCRIPTIONAL REPRESSOR (PROBABLY TETR-FAMILY) MCE3R; SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium tuberculosis] Length = 406 Score = 637 bits (1643), Expect = 0.0 Identities = 330/398 (82%), Positives = 350/398 (87%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 M SV PVRRRPKDRK+QIL+QAVGLFI+RGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGE EPTPRPL+ DL DLIAAAVASR+LTVLWQREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 + DR VRRRINAIVAGMR+SVLLEVP LSP HSELRAWAVSSTLTSLGRHSL+LP EEL Sbjct: 121 EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 K+ LYQACMAAARTPPVCEL PL RD DVLFSRYETLLA GARLFRAQGYPAV+ Sbjct: 181 KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWR LECI GLV+ Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAV VTEL+HAS +VRDGYLRNQ DR+ +WIDLIG+LVP TS + RL Sbjct: 301 GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 LVAAAISFIEDVARTWHLTRYA VADEI+ +AL+ILTS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTS 398 >tr|C6DQC9|C6DQC9_MYCTK Tax_Id=478434 SubName: Full=TetR-family transcriptional repressor mce3R;[Mycobacterium tuberculosis] Length = 406 Score = 637 bits (1643), Expect = 0.0 Identities = 330/398 (82%), Positives = 350/398 (87%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 M SV PVRRRPKDRK+QIL+QAVGLFI+RGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGE EPTPRPL+ DL DLIAAAVASR+LTVLWQREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 + DR VRRRINAIVAGMR+SVLLEVP LSP HSELRAWAVSSTLTSLGRHSL+LP EEL Sbjct: 121 EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 K+ LYQACMAAARTPPVCEL PL RD DVLFSRYETLLA GARLFRAQGYPAV+ Sbjct: 181 KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWR LECI GLV+ Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAV VTEL+HAS +VRDGYLRNQ DR+ +WIDLIG+LVP TS + RL Sbjct: 301 GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 LVAAAISFIEDVARTWHLTRYA VADEI+ +AL+ILTS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTS 398 >tr|C1APP3|C1APP3_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 406 Score = 637 bits (1643), Expect = 0.0 Identities = 330/398 (82%), Positives = 350/398 (87%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 M SV PVRRRPKDRK+QIL+QAVGLFI+RGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGE EPTPRPL+ DL DLIAAAVASR+LTVLWQREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 + DR VRRRINAIVAGMR+SVLLEVP LSP HSELRAWAVSSTLTSLGRHSL+LP EEL Sbjct: 121 EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 K+ LYQACMAAARTPPVCEL PL RD DVLFSRYETLLA GARLFRAQGYPAV+ Sbjct: 181 KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWR LECI GLV+ Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAV VTEL+HAS +VRDGYLRNQ DR+ +WIDLIG+LVP TS + RL Sbjct: 301 GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 LVAAAISFIEDVARTWHLTRYA VADEI+ +AL+ILTS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTS 398 >tr|A5U3Y2|A5U3Y2_MYCTA Tax_Id=419947 (mce3R)SubName: Full=TetR-family transcriptional repressor;[Mycobacterium tuberculosis] Length = 406 Score = 637 bits (1643), Expect = 0.0 Identities = 330/398 (82%), Positives = 350/398 (87%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 M SV PVRRRPKDRK+QIL+QAVGLFI+RGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGE EPTPRPL+ DL DLIAAAVASR+LTVLWQREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 + DR VRRRINAIVAGMR+SVLLEVP LSP HSELRAWAVSSTLTSLGRHSL+LP EEL Sbjct: 121 EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 K+ LYQACMAAARTPPVCEL PL RD DVLFSRYETLLA GARLFRAQGYPAV+ Sbjct: 181 KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWR LECI GLV+ Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAV VTEL+HAS +VRDGYLRNQ DR+ +WIDLIG+LVP TS + RL Sbjct: 301 GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 LVAAAISFIEDVARTWHLTRYA VADEI+ +AL+ILTS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTS 398 >tr|A1KK29|A1KK29_MYCBP Tax_Id=410289 SubName: Full=Probable transcriptional regulatory protein;[Mycobacterium bovis] Length = 406 Score = 637 bits (1643), Expect = 0.0 Identities = 330/398 (82%), Positives = 350/398 (87%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 M SV PVRRRPKDRK+QIL+QAVGLFI+RGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGE EPTPRPL+ DL DLIAAAVASR+LTVLWQREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 + DR VRRRINAIVAGMR+SVLLEVP LSP HSELRAWAVSSTLTSLGRHSL+LP EEL Sbjct: 121 EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 K+ LYQACMAAARTPPVCEL PL RD DVLFSRYETLLA GARLFRAQGYPAV+ Sbjct: 181 KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWR LECI GLV+ Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAV VTEL+HAS +VRDGYLRNQ DR+ +WIDLIG+LVP TS + RL Sbjct: 301 GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 LVAAAISFIEDVARTWHLTRYA VADEI+ +AL+ILTS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTS 398 >tr|A5WNT8|A5WNT8_MYCTF Tax_Id=336982 SubName: Full=Transcriptional repressor, tetR-family mce3R;[Mycobacterium tuberculosis] Length = 406 Score = 637 bits (1643), Expect = 0.0 Identities = 330/398 (82%), Positives = 350/398 (87%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 M SV PVRRRPKDRK+QIL+QAVGLFI+RGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGE EPTPRPL+ DL DLIAAAVASR+LTVLWQREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 + DR VRRRINAIVAGMR+SVLLEVP LSP HSELRAWAVSSTLTSLGRHSL+LP EEL Sbjct: 121 EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 K+ LYQACMAAARTPPVCEL PL RD DVLFSRYETLLA GARLFRAQGYPAV+ Sbjct: 181 KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWR LECI GLV+ Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAV VTEL+HAS +VRDGYLRNQ DR+ +WIDLIG+LVP TS + RL Sbjct: 301 GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 LVAAAISFIEDVARTWHLTRYA VADEI+ +AL+ILTS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTS 398 >tr|A4KIA5|A4KIA5_MYCTU Tax_Id=395095 SubName: Full=Transcriptional repressor (Probably tetR-family) mce3R;[Mycobacterium tuberculosis str. Haarlem] Length = 406 Score = 637 bits (1643), Expect = 0.0 Identities = 330/398 (82%), Positives = 350/398 (87%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 M SV PVRRRPKDRK+QIL+QAVGLFI+RGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGE EPTPRPL+ DL DLIAAAVASR+LTVLWQREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 + DR VRRRINAIVAGMR+SVLLEVP LSP HSELRAWAVSSTLTSLGRHSL+LP EEL Sbjct: 121 EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 K+ LYQACMAAARTPPVCEL PL RD DVLFSRYETLLA GARLFRAQGYPAV+ Sbjct: 181 KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWR LECI GLV+ Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAV VTEL+HAS +VRDGYLRNQ DR+ +WIDLIG+LVP TS + RL Sbjct: 301 GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 LVAAAISFIEDVARTWHLTRYA VADEI+ +AL+ILTS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTS 398 >tr|A2VJ71|A2VJ71_MYCTU Tax_Id=348776 SubName: Full=Transcriptional repressor (Probably tetR-family) mce3R;[Mycobacterium tuberculosis C] Length = 406 Score = 637 bits (1643), Expect = 0.0 Identities = 330/398 (82%), Positives = 350/398 (87%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 M SV PVRRRPKDRK+QIL+QAVGLFI+RGFHSVKLEDIAEAAGVTARALYRHYDNKQA Sbjct: 1 MASVAQPVRRRPKDRKKQILDQAVGLFIERGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 Query: 61 LLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 LLAEAIRTGQDQYQSARRLTEGE EPTPRPL+ DL DLIAAAVASR+LTVLWQREARYLN Sbjct: 61 LLAEAIRTGQDQYQSARRLTEGETEPTPRPLNADLEDLIAAAVASRALTVLWQREARYLN 120 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 + DR VRRRINAIVAGMR+SVLLEVP LSP HSELRAWAVSSTLTSLGRHSL+LP EEL Sbjct: 121 EDDRTAVRRRINAIVAGMRDSVLLEVPDLSPQHSELRAWAVSSTLTSLGRHSLSLPGEEL 180 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 K+ LYQACMAAARTPPVCEL PL RD DVLFSRYETLLA GARLFRAQGYPAV+ Sbjct: 181 KKLLYQACMAAARTPPVCELPPLPAGDAARDEADVLFSRYETLLAAGARLFRAQGYPAVN 240 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWR LECI GLV+ Sbjct: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRCLECIRALRANQQAAQRLRGLVQ 300 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 GHVRISLDAPDLVAV VTEL+HAS +VRDGYLRNQ DR+ +WIDLIG+LVP TS + RL Sbjct: 301 GHVRISLDAPDLVAVSVTELSHASVEVRDGYLRNQGDREAVWIDLIGKLVPATSVAQGRL 360 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 LVAAAISFIEDVARTWHLTRYA VADEI+ +AL+ILTS Sbjct: 361 LVAAAISFIEDVARTWHLTRYAGVADEISGLALAILTS 398 >tr|A1TC71|A1TC71_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium vanbaalenii] Length = 391 Score = 531 bits (1368), Expect = e-149 Identities = 283/392 (72%), Positives = 314/392 (80%), Gaps = 3/392 (0%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 VRRRPKDRKQQIL+QAV LFIDRGFHSVKLEDIAEA+GVTARALYRHYDNKQALLA AIR Sbjct: 2 VRRRPKDRKQQILDQAVRLFIDRGFHSVKLEDIAEASGVTARALYRHYDNKQALLAAAIR 61 Query: 68 TGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEV 127 GQ+QYQSAR GE E R LS +LPDL+ AAVASRSLTVLWQREARYL+ A+R EV Sbjct: 62 AGQEQYQSARPPAGGEAESPHRALSAELPDLVTAAVASRSLTVLWQREARYLDAAERAEV 121 Query: 128 RRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQA 187 RRRI+AIV G+ +S+ +EVP LSP H+ELRAWAVSS +TSLGRHSLTL +EL L+ A Sbjct: 122 RRRIHAIVTGIEQSLRVEVPDLSPRHAELRAWAVSSVITSLGRHSLTLAKDELHRLLFGA 181 Query: 188 CMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIGKG 247 CMA ARTPPV LEP + + LFSR+ETLLA GARLFRAQGYPAVSTSEIGKG Sbjct: 182 CMAVARTPPVGPLEP---DVAPPNDERALFSRHETLLAAGARLFRAQGYPAVSTSEIGKG 238 Query: 248 AGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVRISL 307 GIAGPGLYRSFSSKQAILDALI RLDEW SL CI LV G V+ISL Sbjct: 239 VGIAGPGLYRSFSSKQAILDALITRLDEWWSLACIRVLRTDTEAAECLRALVAGRVQISL 298 Query: 308 DAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVAAAIS 367 D PDLVA+ VTEL+ AS +VRD Y+RNQADR+ +WI+LIG+LVPQT+ EARLLV AA S Sbjct: 299 DDPDLVAMSVTELSFASEEVRDRYMRNQADREAVWIELIGKLVPQTAPAEARLLVGAANS 358 Query: 368 FIEDVARTWHLTRYAAVADEITAIALSILTSR 399 FI+D RTWHLTRYA +ADEITAI LSILTSR Sbjct: 359 FIDDAVRTWHLTRYAGIADEITAITLSILTSR 390 >tr|Q0SBP1|Q0SBP1_RHOSR Tax_Id=101510 SubName: Full=Possible transcriptional regulator;[Rhodococcus sp.] Length = 416 Score = 209 bits (531), Expect = 6e-52 Identities = 141/395 (35%), Positives = 196/395 (49%), Gaps = 9/395 (2%) Query: 6 APVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEA 65 A RRRP+DR+ QIL A LF GFH+V++EDIAEA VTARA+YRH+ NKQ LL++ Sbjct: 11 AATRRRPRDRRAQILHNASELFTKYGFHAVRMEDIAEATDVTARAIYRHFANKQDLLSQV 70 Query: 66 IRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRI 125 + QD+ A + E E L L ++ A++ S L LWQREAR+L D Sbjct: 71 VLEDQDRLLMAAQSAE-RSETGVCSLEELLTRMVEASLESLRLGPLWQREARHLTADDFE 129 Query: 126 EVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLY 185 VR I +R ++ P S +++RAW S +TS G L L L Sbjct: 130 RVREGTRRIGGAVRRAIEKADPSKSRFGADVRAWMAVSIITSPGHCDRLLSQRRLSPLLV 189 Query: 186 QACMAAARTPPVCELEPLGTAAGGRD----GQDVLFSRYETLLATGARLFRAQGYPAVST 241 A +AA TP P A + + SR E ++A AR FR +G+ VS Sbjct: 190 SAALAAINTPEFASASPESRDAPAAEAPVANERPGTSRREQIIAAAARAFRERGFGGVSL 249 Query: 242 SEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEG 301 E GIAGP +YR F SK IL A+I R+ EW +LE GLV G Sbjct: 250 DEF----GIAGPAVYRYFDSKADILSAMIIRVQEWMALESSRTMHHSVSDEQVIEGLVRG 305 Query: 302 HVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLL 361 +VRI+ +A DL AV VTE + + R + D W+ + + + +A L Sbjct: 306 YVRIATEATDLFAVSVTEALNLPASAAERDRRIRQDDLAEWVKWLRTSRSEVTEADALAL 365 Query: 362 VAAAISFIEDVARTWHLTRYAAVADEITAIALSIL 396 V A + + D+ R HL+R+A DE+ A +++ L Sbjct: 366 VNAVRTALNDLVRIPHLSRHAEFPDELVACSMNAL 400 >tr|C3JEU7|C3JEU7_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, TetR family;[Rhodococcus erythropolis SK121] Length = 382 Score = 183 bits (464), Expect = 4e-44 Identities = 125/393 (31%), Positives = 187/393 (47%), Gaps = 19/393 (4%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 V RRP DRKQQIL A LF + G+H+V + +A A G+TA ALYRH+ NK LL A+ Sbjct: 2 VVRRPHDRKQQILAAAGELFREHGYHNVSVAQVAAAVGITAPALYRHFKNKPDLLYAAVN 61 Query: 68 TGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVAS----RSLTVLWQREARYLNDAD 123 G + R+ E DL LIA AS R L++LWQREARYL D Sbjct: 62 AGIESLYD--RVAGSE----------DLKSLIAELAASVSRRRGLSLLWQREARYLPDGQ 109 Query: 124 RIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKER 183 R E+R + + A + E P L S L AWA+ + S+ H ++LP +++ Sbjct: 110 REEMRATLKSAAARDAALIRTERPELDEEDSYLLAWALIAVFNSVSSHRVSLPRRQMELL 169 Query: 184 LYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSE 243 L + A T + T G V R E LL RLF +GY AV+T + Sbjct: 170 LAELAERAVHTELGHSEGKMETPTG---HVPVAMPRRELLLTEAIRLFDERGYQAVNTED 226 Query: 244 IGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHV 303 IG+ AG GP +Y F +K +L A + R E R + GL+ H+ Sbjct: 227 IGEAAGTTGPNVYNHFDAKIDLLIAAVSRGGERRRIGVAQALAAATGPEDALSGLLAAHI 286 Query: 304 RISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVA 363 +++ L+ + ++EL+ R +NQ + LW+ ++ ++ P AR+ V Sbjct: 287 DFAINERHLIGLLISELDQLPDKFRRTCEQNQREYVALWVKMLDDVRPGLEPATARITVN 346 Query: 364 AAISFIEDVARTWHLTRYAAVADEITAIALSIL 396 AA++ +E+ R L R + + + I ++L Sbjct: 347 AALTVVENAVRIGRLRRRDDLPERLFEIGSAVL 379 >tr|C7MXS3|C7MXS3_SACVD Tax_Id=471857 SubName: Full=Transcriptional regulator;[Saccharomonospora viridis] Length = 400 Score = 181 bits (460), Expect = 1e-43 Identities = 125/394 (31%), Positives = 190/394 (48%), Gaps = 10/394 (2%) Query: 10 RRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTG 69 +RP+DRK Q+ A LF RG+H V + DIA AAGVT A+YRH+ +KQA+LA + +G Sbjct: 6 KRPRDRKSQLAAVASELFRQRGYHGVGINDIAAAAGVTGPAIYRHFADKQAILAHVLLSG 65 Query: 70 -QDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVR 128 +D + + E+ TP + L L A +V R LW+ E R+L+ + ++R Sbjct: 66 LRDMEIATEAALDPERSSTPERIRELLSGLAARSVERRDTAALWRWEGRHLDAESQQQIR 125 Query: 129 RRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQAC 188 RR A+++ + + P LS +EL WA S S+ H +TL E L + Sbjct: 126 RRSTAMLSAWATVLRRKRPELSEEDAELLCWATLSVFGSVSVHRVTLAKRRFIELLTELA 185 Query: 189 MAAART----PPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEI 244 + P E + T GQ SR E +L A LFR G+ AVS +I Sbjct: 186 LRVLHVDLPEPDDAEPTAVPTVPAVTLGQP---SRRERVLTEAAELFRRHGFAAVSMEDI 242 Query: 245 GKGAGIAGPGLYRSFSSKQAILDALIRRLDE--WRSLECIXXXXXXXXXXXXXXGLVEGH 302 GK AGIAGP +YR F SK ++L A+ RR + + + L + + Sbjct: 243 GKAAGIAGPSVYRHFPSKASLLTAIGRRAGDRVMVAADHALRVSAPSDEREALRRLADSY 302 Query: 303 VRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLV 362 VR+ P+L+ + H R R Q D T W+ L+ + P + EA+++V Sbjct: 303 VRVLTGPPELLVFFSVDHVHIDEKDRSELSRIQRDYVTQWVRLLEAVHPGLDTREAKIIV 362 Query: 363 AAAISFIEDVARTWHLTRYAAVADEITAIALSIL 396 AA++ D+ART + A E+T + ++L Sbjct: 363 HAALTIANDLARTRRVASRPHFATELTTLLHAVL 396 >tr|C0ZPE0|C0ZPE0_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus erythropolis] Length = 405 Score = 178 bits (451), Expect = 1e-42 Identities = 119/392 (30%), Positives = 186/392 (47%), Gaps = 11/392 (2%) Query: 5 VAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAE 64 V V RRP DRKQQIL A LF + G+H+V + +A G+TA ALYRH+ NK LL Sbjct: 22 VRMVVRRPHDRKQQILAAAGELFREHGYHNVSVAQVAAGVGITAPALYRHFKNKPDLLYA 81 Query: 65 AIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADR 124 A+ G +S G ++ L + +L + R L++LWQREARYL D R Sbjct: 82 AVNAG---IESLYDRVAGSED-----LKSMIAELAVSVSRRRGLSLLWQREARYLPDEQR 133 Query: 125 IEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERL 184 E+R + + A + E P L S L AWA+ + S+ H ++LP +++ L Sbjct: 134 EEMRATLKSAAARDAALIRTERPELDEEDSYLLAWALIAVFNSVSSHRVSLPRRQMELLL 193 Query: 185 YQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEI 244 + A T + T G + R E LL RLF +GY AV+T +I Sbjct: 194 AELAERAVHTELGHSEVKVETPTG---HVPLAMPRRELLLTEAIRLFDERGYQAVNTEDI 250 Query: 245 GKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVR 304 G+ AG GP +Y F +K +L A + R E R + GL+ H+ Sbjct: 251 GEAAGTTGPNVYNHFDAKIDLLIAAVSRGGERRRIGVAQALAAASGPEDALSGLLAAHID 310 Query: 305 ISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVAA 364 +++ L+ + ++EL+ R +NQ + LW+ ++ ++ P AR+ V A Sbjct: 311 FAINERHLIGLLISELDQLPDKFRRTCEQNQREYVALWVKMLDDVRPGLEPATARITVNA 370 Query: 365 AISFIEDVARTWHLTRYAAVADEITAIALSIL 396 A++ +E+ R L R + + + I ++L Sbjct: 371 ALTVVENAVRIGRLRRRDDLPERLFEIGSAVL 402 >tr|C3JMC4|C3JMC4_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, TetR family;[Rhodococcus erythropolis SK121] Length = 400 Score = 177 bits (448), Expect = 3e-42 Identities = 121/396 (30%), Positives = 190/396 (47%), Gaps = 20/396 (5%) Query: 10 RRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTG 69 RRP+DRKQQIL A LF + G+H++ + D+ +T ALYRHY NK +LL A+ G Sbjct: 5 RRPRDRKQQILTAASELFREHGYHNISVSDVTARVDITTSALYRHYRNKNSLLYHAVLAG 64 Query: 70 QDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVRR 129 +S G + L L L A +V R L +LWQREARYL+D R +R+ Sbjct: 65 ---IESLNESVGGATD-----LYTLLTTLSATSVERRGLPLLWQREARYLDDDQREMLRK 116 Query: 130 RINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQACM 189 + + + E V LS + S L A+++ + +S H +++P +++ L+ Sbjct: 117 ELRFSTSRISELVQAHRSDLSDSDSRLLAYSILAVFSSSSSHRISMPPRQMEALLFD--- 173 Query: 190 AAARTPPVCELEPLGTA-----AGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEI 244 +AR L P+G+A A + + SR E LL +LF +GY VS +I Sbjct: 174 LSARV----SLSPIGSADPDVPAARTEVISIPVSRREQLLTAAIQLFDERGYRTVSNEDI 229 Query: 245 GKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVR 304 G G G +Y F +K IL I R + R L L+ H+ Sbjct: 230 GAACGTTGQNVYNHFDTKLDILSTAITRGFDRRDLAVRQALSQVGDSSQTLDILLGVHIA 289 Query: 305 ISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVAA 364 +L+ L+ + TEL + R ++ Q D LW+ + E+ P + EA+ V+A Sbjct: 290 FALEDGHLIGLMATELAELPDNTRKACVQAQRDYLELWVRALSEVRPGLDATEAKFTVSA 349 Query: 365 AISFIEDVARTWHLTRYAAVADEITAIALSILTSRS 400 A++ I + R + R A +AD +T I ++++T S Sbjct: 350 AMTLIGNAIRIGSVRRRADLADRLTEICIALMTETS 385 >tr|A4FF46|A4FF46_SACEN Tax_Id=405948 SubName: Full=Transcriptional regulator, TetR family;[Saccharopolyspora erythraea] Length = 404 Score = 176 bits (446), Expect = 5e-42 Identities = 123/380 (32%), Positives = 178/380 (46%), Gaps = 16/380 (4%) Query: 11 RPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQ 70 RP++R+ QI+ A LF RG+ V + DIAEA GV ALYRH+ +KQ LL E + Sbjct: 17 RPRNRRTQIVAAASELFHARGYPRVGMSDIAEAVGVGPSALYRHFASKQRLLTEVV---- 72 Query: 71 DQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVRRR 130 + R E L + +L AA+ R L VLWQREAR+L A+R +++ Sbjct: 73 --LEELRPFGEILGRVGTDDLDALVAELATAALDHRRLGVLWQREARHLPAAEREKLKGE 130 Query: 131 INAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQACMA 190 + A+ G+ + + PGL+ + R W + S LTS H + LP E + L Sbjct: 131 LRAVAGGLADLARVRRPGLAEEDARFRGWCLFSALTSPSYHQVELPRAEFEGLLRNMVAV 190 Query: 191 AARTPPVC-----ELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIG 245 P+ EP + R SR LL+ RLF G+ AV+T +IG Sbjct: 191 VTDQQPMALASRRTAEPATSPLLARRA-----SRRAVLLSAATRLFADNGFTAVTTDDIG 245 Query: 246 KGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVRI 305 AGIAGP +Y F+SKQ +L A+I R W +E L+ ++ Sbjct: 246 AAAGIAGPSVYSHFASKQELLGAVIARGCAWLEIELERTLTATGDAEEALRELLHSYITF 305 Query: 306 SLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVAAA 365 + D + + VTE+ H R + Q D W+ L+ + P V AR+LV AA Sbjct: 306 AYDHGRFIDILVTEVGHLPDAERHRARQTQHDYVAEWVALLCRVRPDLDRVPARVLVQAA 365 Query: 366 ISFIEDVARTWHLTRYAAVA 385 ++ D+ART + AVA Sbjct: 366 LTAANDMARTGTVRDPDAVA 385 Score = 51.6 bits (122), Expect = 2e-04 Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 6/138 (4%) Query: 2 DSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQAL 61 + +P+ R R+ +L A LF D GF +V +DI AAG+ ++Y H+ +KQ L Sbjct: 206 EPATSPLLARRASRRAVLLSAATRLFADNGFTAVTTDDIGAAAGIAGPSVYSHFASKQEL 265 Query: 62 LAEAIRTGQD--QYQSARRLT-EGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARY 118 L I G + + R LT G+ E R L L I A + E + Sbjct: 266 LGAVIARGCAWLEIELERTLTATGDAEEALREL---LHSYITFAYDHGRFIDILVTEVGH 322 Query: 119 LNDADRIEVRRRINAIVA 136 L DA+R R+ + VA Sbjct: 323 LPDAERHRARQTQHDYVA 340 >tr|Q0SCC3|Q0SCC3_RHOSR Tax_Id=101510 SubName: Full=Probable transcriptional regulator;[Rhodococcus sp.] Length = 398 Score = 161 bits (407), Expect = 2e-37 Identities = 124/399 (31%), Positives = 188/399 (47%), Gaps = 29/399 (7%) Query: 10 RRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTG 69 RRP++RK QI+ A F RG+H V +EDIA A G+TA ALYRH+ NKQ LLA+AI Sbjct: 20 RRPRNRKAQIITVAREQFGRRGYHGVNMEDIASAVGITAGALYRHFPNKQDLLAQAI--- 76 Query: 70 QDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVRR 129 +A LT + P + + + + + VL+ +E+R L R EV+ Sbjct: 77 ---LDAASSLTATLDDIDPEDSASNFLAMFRYCLDNDFRAVLFDQESRNLVPDRRAEVQT 133 Query: 130 RINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAE-------ELKE 182 + ++VA + +++ E P L+ A +++ AWA+SS S RH TLP + EL + Sbjct: 134 AVRSVVARIADALRAERPDLTAADADMLAWAMSSVALSPARHRTTLPRKRWESLLLELFD 193 Query: 183 RLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTS 242 RL A + P E G A SR ETLL LFR +GY +V+ Sbjct: 194 RLRDAPILHTEEIPAEEAHVSGFAHA---------SRRETLLTAAISLFRQRGYQSVTMD 244 Query: 243 EIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGH 302 +IG AG+A +Y F SK +L A++ R +E + + +V + Sbjct: 245 DIGAAAGMASSSIYTYFGSKVEVLQAILSRGNETLRMGLVRALAGAQSREDALTRVVHSY 304 Query: 303 VRISLDAPD-LVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLL 361 ++ APD + + + E + + + Q + W+ L+G T + E R Sbjct: 305 A-TAVAAPDSAIGILIEESTNLPEEAQSQSRTGQREYIDEWVHLLG-----TDTHETRTT 358 Query: 362 VAAAISFIEDVARTWHLTRYAAVADEITAIALSILTSRS 400 V AAI I + R HL DEI +AL +L R+ Sbjct: 359 VLAAIDLINGLFRLRHLRARPQHQDEIEDLALRVLGVRT 397 >tr|C1B2J3|C1B2J3_RHOOB Tax_Id=632772 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus opacus] Length = 389 Score = 160 bits (404), Expect = 3e-37 Identities = 125/412 (30%), Positives = 176/412 (42%), Gaps = 44/412 (10%) Query: 1 MDSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQA 60 M + ++ VRRRPKDRK+QILE A L ++ G+ +V + IA+ G+TA ALYRH+ NK Sbjct: 7 MPTDLSTVRRRPKDRKEQILEAARALIVEVGYRNVSMAMIADRVGITAGALYRHFANKSV 66 Query: 61 LLAEAIRTGQDQ----YQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREA 116 LL I D+ + S RL + E R AV+ + + LW REA Sbjct: 67 LLGAVIEQSFDEVTPTFGSRARLADALAESCER------------AVSHQDVGALWWREA 114 Query: 117 RYLNDADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLP 176 R L D E+R R+ I + V E P L +E AW V S L S H+ +P Sbjct: 115 RNLPDEKLEELRERLRVINKQYADLVAAERPTLPEEQAEELAWGVQSILASPSSHTSRIP 174 Query: 177 AEELKERLYQACMAAART----------PPVCELEPLGTAAGGRDGQDVLFSRYETLLAT 226 E L C T V LEP+ S+ E LL Sbjct: 175 EPEFAALLTAVCAGLCETRLPAPSPAVEQTVSRLEPV--------------SKREALLGH 220 Query: 227 GARLFRAQGYPAVSTSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXX 286 LF +GY A EIG AG++GP LY F SK +L A + R L Sbjct: 221 AIVLFGEKGYEATGLDEIGAAAGVSGPNLYSYFDSKADLLQAAVERGTSALWLLLHTVLR 280 Query: 287 XXXXXXXXXXGLVEGHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLI 346 LV G+V ++ + L ++ E + S + R Q + W L+ Sbjct: 281 ENSAPKDALGALVSGYVELASNKTILTSLLQAEQSTLSDEAR----VRQREYVAEWTALL 336 Query: 347 GELVPQTSSVEARLLVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 PQ AR+LV + + +AR HL A + ++ A+ L++L S Sbjct: 337 RACRPQLDQATARVLVHTGLGVVHTLARIEHLRANATLRADLAAMTLAVLFS 388 >tr|C1AZZ6|C1AZZ6_RHOOB Tax_Id=632772 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus opacus] Length = 410 Score = 152 bits (384), Expect = 7e-35 Identities = 118/380 (31%), Positives = 175/380 (46%), Gaps = 15/380 (3%) Query: 7 PVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAI 66 P+RRRPK+RK QI A F +RG+H+V +++IA G++ ALYRHY NK ALL A Sbjct: 15 PIRRRPKNRKAQIANVAAEAFSERGYHAVGVDEIAATIGISGPALYRHYPNKYALLVHAA 74 Query: 67 RTGQDQYQSARRLTEG---EQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDAD 123 T D Q+ G E EP R L + L+A ++ +R + L++ E RYL D Sbjct: 75 TTTADLLQATADGALGGVAELEPGDR-LEHLIAALVANSIENRKVAGLYRWEGRYLEAED 133 Query: 124 RIEVRRRINAIVAGMRESV---LLEV-PGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEE 179 R+RI A+ + + V L E+ P L+ + + S L S+ H TL Sbjct: 134 ----RKRIRAVFVHVTQCVAAPLREIRPELTAVDATTLGASTLSVLGSISAHRTTLATRR 189 Query: 180 LKERLYQAC--MAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYP 237 L L AC + A PP G G G V S+ E L+ ++F GY Sbjct: 190 LDTLLKSACGSILNATLPPAVPNAGGGAGTGPVRGLAVT-SKRELLINEAVKIFDRHGYH 248 Query: 238 AVSTSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXG 297 S EIG AGI +YR F SK +L A+ R + ++ Sbjct: 249 DSSIEEIGAAAGINASSVYRHFPSKADLLAAVFYRASDRLAVATSAALATATDPEDALRK 308 Query: 298 LVEGHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVE 357 L E ++ +S P++++V E+ + + R Q W+ L+ + P+ S+ E Sbjct: 309 LAESYLELSFGNPEVLSVYFAEIGNLPKNERTNLRNVQRLHVEEWVHLVTAVRPELSAPE 368 Query: 358 ARLLVAAAISFIEDVARTWH 377 AR LV AA+ + D+ R H Sbjct: 369 ARFLVHAALGLVLDIGRLVH 388 >tr|Q0S3J6|Q0S3J6_RHOSR Tax_Id=101510 SubName: Full=Possible transcriptional regulator;[Rhodococcus sp.] Length = 412 Score = 151 bits (381), Expect = 2e-34 Identities = 115/379 (30%), Positives = 172/379 (45%), Gaps = 13/379 (3%) Query: 7 PVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAI 66 P+RRRPK+RK QI A F +RG+H+V +++IA G++ ALYRHY NK ALL A Sbjct: 17 PIRRRPKNRKAQIANVAAEAFSERGYHAVGVDEIAATIGISGPALYRHYPNKYALLVHAA 76 Query: 67 RTGQDQYQSAR-RLTEG--EQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDAD 123 T D Q+A EG E+EP R L + L+A + +R + L++ E RYL D Sbjct: 77 TTTADALQAAADGALEGMAEREPGDR-LDHLVSALVANTIENRKVAGLYRWEGRYLEAED 135 Query: 124 RIEVRR---RINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 R +R + VAG + P L+ + + S + S+ H TL L Sbjct: 136 RTRIRDVFVHVTQCVAGPLRELR---PELTSVDATTLGASTLSVMGSISAHRTTLATRRL 192 Query: 181 KERLYQACMAAART--PPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPA 238 L AC + R PP + G G V S+ E L+ ++F GY Sbjct: 193 DALLKSACESILRATLPPAVPADGRNAGTGAVRGLAVT-SKRELLINEAVKIFDRHGYHD 251 Query: 239 VSTSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGL 298 S EIG AGI +YR F SK +L A+ R + ++ L Sbjct: 252 SSIEEIGAAAGINASSVYRHFPSKADLLAAVFYRASDRLAVATSAALSTATGPEDALRKL 311 Query: 299 VEGHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEA 358 E ++ +S P++++V E+ + + R Q W+ L+ + + S+ EA Sbjct: 312 AESYLELSFRNPEVLSVYFAEIGNLPKNERTNLRNVQRLHVEEWVHLVTTVRSELSAPEA 371 Query: 359 RLLVAAAISFIEDVARTWH 377 R LV AA+ + D+ R H Sbjct: 372 RFLVHAALGLVLDIGRLVH 390 >tr|C0ZR71|C0ZR71_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus erythropolis] Length = 424 Score = 151 bits (381), Expect = 2e-34 Identities = 114/399 (28%), Positives = 182/399 (45%), Gaps = 16/399 (4%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 V+RRPKDRK +I A F +RG+ +V +EDIA + G++ ALYRH+ NK A+ A Sbjct: 30 VKRRPKDRKAKIAAAAAIAFSERGYPAVGVEDIASSVGISGSALYRHFPNKYAMFRHAAL 89 Query: 68 TGQDQYQSARRLTEGEQEPTPRP-LSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIE 126 D +SA + T R L DL +I V +R +++ E+R+L+ ADR Sbjct: 90 ELTDALESALDAVSVAADATDRERLREDLLAVIRTTVRNRRTAGIYRWESRFLDAADRKS 149 Query: 127 VRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQ 186 VR + A+ + + P S + A+ S + S+ H+L LP +++ L Sbjct: 150 VRAQAAAVNHRVALHLSRSEPPASARAETILTSAMFSVIGSITAHNLILPQRRMEQVLLD 209 Query: 187 ACMAAARTPPVCELEPLGTAAGGRDGQDVLFSR------YETLLATGARLFRAQGYPAVS 240 AC++ +E G+A R + + +R E LL RLF ++GY VS Sbjct: 210 ACLS---------IEHGGSAITSRRSEQTVSTRPVTTNKRERLLQEAVRLFDSRGYHDVS 260 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 EI AG+ G+YR F SK +L A+ R + L L Sbjct: 261 IEEIAAAAGLNASGMYRYFPSKAELLGAVFYRAADRLDLATAAVFESATSPEEALRALSA 320 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 +V +S +L++V +E+N+ R Q W ++ E+ P S++EA+ Sbjct: 321 MYVELSFAQHELMSVYFSEMNNLLPGHRSDLKNRQKLYVVEWARILREIRPDLSAIEAKF 380 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTSR 399 LV AA++ + D+ R A A + ++L R Sbjct: 381 LVHAALNLVPDIGRLMKFDVAAENASTLQTFMSAVLFGR 419 Score = 40.0 bits (92), Expect = 0.52 Identities = 22/60 (36%), Positives = 29/60 (48%) Query: 206 AAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIGKGAGIAGPGLYRSFSSKQAI 265 AAG + R + A A F +GYPAV +I GI+G LYR F +K A+ Sbjct: 24 AAGSESVKRRPKDRKAKIAAAAAIAFSERGYPAVGVEDIASSVGISGSALYRHFPNKYAM 83 >tr|B5H6T4|B5H6T4_STRPR Tax_Id=457429 SubName: Full=Predicted protein;[Streptomyces pristinaespiralis ATCC 25486] Length = 396 Score = 150 bits (380), Expect = 2e-34 Identities = 116/395 (29%), Positives = 176/395 (44%), Gaps = 11/395 (2%) Query: 3 SVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALL 62 +V P RRP++RK IL A+ F G+ + +++DIA A G+TA ALY H+ +KQ LL Sbjct: 6 AVNRPPSRRPRNRKALILAAAIDCFQRSGYQATEMKDIAAAVGITAAALYHHFRSKQELL 65 Query: 63 AEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDA 122 A+ D E E L L L + ++ RS +++W RE R+L+ Sbjct: 66 GAALLDSSDHLWRTVAAAEAE------GLESLLRLLTSFSLDHRSYSIVWYREIRHLSSE 119 Query: 123 DRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKE 182 R EVR+R I + +++ P L P + L +WAV + L S H + LP +E Sbjct: 120 HRDEVRQRQQRISGTLGKALQSSRPDLGPTETALISWAVMAALGSPSYHRIELPRPRFEE 179 Query: 183 RLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTS 242 L + R L P A + SR E LL LF +GY AVS Sbjct: 180 LL----LGLGRAMTQVRLSPTDAPAPRTGPRLRPVSRREALLTAAVTLFTERGYQAVSME 235 Query: 243 EIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGH 302 ++G G++ +Y F SK +L A++ R+ E + +V + Sbjct: 236 DVGAAVGVSRLSVYNYFPSKADLLSAVLHRVSEEKWATLNRSLAQSETEEEALRRIVRSY 295 Query: 303 VRIS-LDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLL 361 + LD + V+EL H RD LR Q D W+ L P S EA +L Sbjct: 296 AESTVLDRGSGAMLLVSELAHIPSADRDALLRLQVDYVAEWVALFLGCRPTLSQSEAGIL 355 Query: 362 VAAAISFIEDVARTWHLTRYAAVADEITAIALSIL 396 V A + + + R L++ +A + +AL+IL Sbjct: 356 VNAVLVMLSVLPRLPLLSQRDDLAGPLAELALTIL 390 >tr|C3JV27|C3JV27_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, TetR family protein;[Rhodococcus erythropolis SK121] Length = 423 Score = 150 bits (379), Expect = 3e-34 Identities = 113/399 (28%), Positives = 185/399 (46%), Gaps = 16/399 (4%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQAL------ 61 V+RRPKDRK QI A F +RG+ +V ++DIA A G++ ALYRH+ NK A+ Sbjct: 29 VKRRPKDRKAQIAAAAAIAFSERGYPAVSVDDIASAVGISGSALYRHFPNKYAMFRHAAL 88 Query: 62 -LAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 L EA+ + D A T+ ++ L DL +I + +R +++ E+R+L+ Sbjct: 89 ELTEALASALDAVSVAPAATDAQR------LREDLIAVIRTTIRNRRTAGIYRWESRFLD 142 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 DR VR + +A+ + + ++ L A+ S + S+ H+L LP + Sbjct: 143 ADDRKSVRAQASAVNRRVARYLSRTERAMTARDETLVVAAMFSVIGSITVHNLLLPQRAM 202 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 ++ L AC+A + L ++ R V ++ E LL RLF ++GY VS Sbjct: 203 EKVLLDACLAIDQGEGAITASRLEQSSLPR---TVTTNKRERLLQEAVRLFDSRGYHDVS 259 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 EI AG+ G+YR F SK +L A+ R + L L Sbjct: 260 IEEIAAAAGLNASGMYRYFPSKAELLGAVFYRAADRLDLATAAVFDSATSHEQVLRSLSA 319 Query: 301 GHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARL 360 +V +S +L++V +E+N+ R Q W ++GE+ P+ S+VEA+ Sbjct: 320 MYVELSFAQHELMSVYFSEMNNLLPSHRSDLKNRQKLYVVEWARVLGEIRPELSAVEAKF 379 Query: 361 LVAAAISFIEDVARTWHLTRYAAVADEITAIALSILTSR 399 +V AA++ + DV R A A + ++L R Sbjct: 380 VVHAALNLVPDVGRMMKFDAAAENAAMLQVFMSAVLFGR 418 >tr|D0LBV0|D0LBV0_GORB4 Tax_Id=526226 SubName: Full=Regulatory protein TetR;[Gordonia bronchialis] Length = 403 Score = 147 bits (372), Expect = 2e-33 Identities = 119/371 (32%), Positives = 175/371 (47%), Gaps = 15/371 (4%) Query: 9 RRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRT 68 RRRP R+Q IL+ A F G+H+V+LEDIA+A G++A ALYRH+ K AL AE Sbjct: 24 RRRPAARRQFILDAAAKAFSAGGYHTVRLEDIADAVGISAPALYRHFPTKYALFAETTAR 83 Query: 69 GQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVR 128 D A P L L + ++ +R L++ E+RYL +D VR Sbjct: 84 LADALADAVGAVGCGH---PGELDDLLTAITTTSIENRRTGGLYRWESRYLESSDGERVR 140 Query: 129 RRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQAC 188 I +R ++ P L A ++L A++S + S H LPA E + + A Sbjct: 141 EVIINQHRRIRSALRHRRPSLDDADADLITAAMTSVVASPSTHRAALPAREAEALIRAAA 200 Query: 189 MA--AARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIGK 246 ++ + P +L P T G V +R E +LA LF +G+ V+ +I + Sbjct: 201 LSLVSVELPAPAQLTP-PTPVG-----LVPAARREVILAESIALFATRGFRDVTIDDIAR 254 Query: 247 GAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVRIS 306 AGI G+YR F K AIL+A R + + LV +V +S Sbjct: 255 AAGIPASGVYRHFEGKAAILEAAFWRASDRVTASIADALAAATTPHEAIVELVSRYVGLS 314 Query: 307 LDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTL--WIDLIGELVPQTSSVEARLLVAA 364 + +L+ V VTE+ H S R LRNQ R T+ W + P+ S+ +AR LV A Sbjct: 315 CGSTELITVYVTEIGHVSPKQRTA-LRNQ-QRITVEEWATWVTRCRPELSATQARFLVHA 372 Query: 365 AISFIEDVART 375 A+ I D++RT Sbjct: 373 ALGAITDLSRT 383 Score = 63.5 bits (153), Expect = 4e-08 Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 2/167 (1%) Query: 7 PVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAI 66 PV P R++ IL +++ LF RGF V ++DIA AAG+ A +YRH++ K A+L A Sbjct: 219 PVGLVPAARREVILAESIALFATRGFRDVTIDDIARAAGIPASGVYRHFEGKAAILEAAF 278 Query: 67 RTGQDQYQSARRLTEGEQEPTPRPLSVDLPD-LIAAAVASRSLTVLWQREARYLNDADRI 125 D+ +A TP V+L + + S L ++ E +++ R Sbjct: 279 WRASDRV-TASIADALAAATTPHEAIVELVSRYVGLSCGSTELITVYVTEIGHVSPKQRT 337 Query: 126 EVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHS 172 +R + V V P LS + A +T L R S Sbjct: 338 ALRNQQRITVEEWATWVTRCRPELSATQARFLVHAALGAITDLSRTS 384 >tr|A4T2S0|A4T2S0_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium gilvum] Length = 410 Score = 147 bits (371), Expect = 2e-33 Identities = 115/380 (30%), Positives = 172/380 (45%), Gaps = 12/380 (3%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 +RRRPKDRK QI + F + G+H V +E IA G++A ALYRHY K L +A+ Sbjct: 10 IRRRPKDRKAQIARASAEAFSELGYHGVSMEMIASRVGISAAALYRHYAGKYELFRDAVL 69 Query: 68 TGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEV 127 Q +G+ V LI A+A+RS L++ E RYL D+ E+ Sbjct: 70 NLGQQLVDGTAGIDGDDPEVVLDRLVSA--LIDIALANRSSGGLYRWERRYLRGDDQAEL 127 Query: 128 RRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQA 187 +++ + ++ V + P L+ + AV S + S+ H LPA ++ L Q Sbjct: 128 LQQLRTVHHRLQTPVSILRPELTARQRSTLSTAVLSIVGSIVDHRAKLPAAQIHRVLTQV 187 Query: 188 CMAAARTPPVCELEPLGTA-AGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIGK 246 A T P A A R S+YE LLA RLF GY S EI Sbjct: 188 ARAILSTELPDAAPPATPAPAAERIRSAAESSKYEALLAESMRLFNLNGYRDTSMEEIAS 247 Query: 247 GAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVRIS 306 G+ G+Y+ FS K IL A+ RR + S E +++ +V + Sbjct: 248 AVGMPASGIYKYFSGKNDILAAIFRRASDRVSAETAEIVSTVPDPQEALAAVIDAYVTRA 307 Query: 307 LDAPDLVAVCVTE-LNHASGDVRDGYLRNQADRDTL--WIDLIGELVPQTSSVEARLLVA 363 P++ ++ +E LN + D R + R T+ W++L+ + P + EAR V Sbjct: 308 FGQPEMESLYYSERLNMSPSDQR---IVRDLQRSTVESWVELVAAVRPDWTPGEARFAVH 364 Query: 364 AAISFIEDVARTWHLTRYAA 383 AA++ + DV R L YAA Sbjct: 365 AAMALVIDVGR---LVHYAA 381 >tr|B5H6S3|B5H6S3_STRPR Tax_Id=457429 SubName: Full=Transcriptional regulator;[Streptomyces pristinaespiralis ATCC 25486] Length = 392 Score = 146 bits (369), Expect = 4e-33 Identities = 112/369 (30%), Positives = 171/369 (46%), Gaps = 19/369 (5%) Query: 10 RRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTG 69 RRP+DRK +I+ AV F G+H+ +E+IA+A G+TA +LY H+ KQ LL + + G Sbjct: 11 RRPRDRKAKIVAAAVECFHRSGYHATGMEEIAKAVGITAGSLYWHFRGKQELLDQVVLDG 70 Query: 70 QDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVRR 129 D +A GE+E L L L + ++ +R+ LW++EA +L+ R EV+ Sbjct: 71 LDMALAA----VGEEE----DLDAVLRSLASFSLENRAFAALWEKEAIHLSPVIRREVQE 122 Query: 130 RINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQACM 189 R A+ + +V PGL +EL AWAV L +++ LP L Sbjct: 123 RHTALAGRVSAAVRAARPGLDARDAELLAWAVLGVLAGPSYNNIELPRPVFDHLL----- 177 Query: 190 AAARTPPVCELEPLGTAA--GGRDGQDVL--FSRYETLLATGARLFRAQGYPAVSTSEIG 245 A VC++E L A G + VL SR E LL+ RLF +G+PAVS +IG Sbjct: 178 -AGLAGNVCQVEGLPPAGPPGATAPRPVLTHASRREALLSASVRLFAERGFPAVSMDDIG 236 Query: 246 KGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVRI 305 K AGI+GP +Y F+SK +L + R + V + Sbjct: 237 KAAGISGPAVYNHFASKSDLLSTALHRATGALQFDLDLTLATSASAHQALERTVRALSTV 296 Query: 306 SLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVAAA 365 +L A A + + H R+ R Q + T W L+ P EA++ V Sbjct: 297 NL-ASGGSAGLLHAIPHLPDADREALHRAQLEYATEWTGLVRACRPDMRQTEAQIAVHCV 355 Query: 366 ISFIEDVAR 374 ++ + +A+ Sbjct: 356 LTLVRFLAQ 364 >tr|C3JUJ2|C3JUJ2_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, TetR family protein;[Rhodococcus erythropolis SK121] Length = 407 Score = 145 bits (367), Expect = 7e-33 Identities = 110/373 (29%), Positives = 168/373 (45%), Gaps = 3/373 (0%) Query: 9 RRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRT 68 R RPK+RK QI A F +RG+H+V +++IA G++ ALYRH+ K AL + Sbjct: 17 RTRPKNRKAQIAAAAAEAFSERGYHAVGIDEIAAKVGISGPALYRHFPTKYALFVYTVNN 76 Query: 69 -GQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEV 127 Q ++ G + P + L+ + +I A + +R L++ E RYL D DR ++ Sbjct: 77 LTQALLDASDPAVHGNENPREQ-LNSTMVGVIRATIENRRRGGLYRWEGRYLVDEDREQL 135 Query: 128 RRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQA 187 R + + + E + P L PA EL A AV S + S+ H L A++++ + A Sbjct: 136 RVGMRTLNLRIAEPLAAVRPELDPADVELIAPAVLSVIASITGHRSALSAKQIEALILAA 195 Query: 188 CMAAARTP-PVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIGK 246 C + P E + A R V S+ E LL LF +GY VS EIG Sbjct: 196 CWSVIGVELPAAEEDGARAEASERKTGLVRTSKREVLLQEAVLLFYQRGYHDVSIEEIGA 255 Query: 247 GAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVRIS 306 AGI +YR F+SK +L A R + ++ L + +V +S Sbjct: 256 AAGINASSVYRHFASKADLLAAAFHRASDRLTMTLGSALAESETPLAAVETLAKMYVEVS 315 Query: 307 LDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVAAAI 366 +L+AV E+ R Q W L E P+ + V+AR LV AA+ Sbjct: 316 FGTSELLAVYFAEIGSLPDRSRTELRNIQRLNVEEWAHLCVEARPELTIVQARFLVHAAL 375 Query: 367 SFIEDVARTWHLT 379 + D+ R H + Sbjct: 376 GLVFDIGRIVHFS 388 >tr|Q5YPJ5|Q5YPJ5_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 416 Score = 145 bits (366), Expect = 9e-33 Identities = 112/378 (29%), Positives = 169/378 (44%), Gaps = 7/378 (1%) Query: 2 DSVVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQAL 61 DS +RRRPK+R+ QI + F G+H V +EDIA G+++ ALYRHY +K AL Sbjct: 16 DSAPREIRRRPKNRRAQIAAASAAAFGALGYHGVSMEDIASGLGISSAALYRHYPSKYAL 75 Query: 62 L-AEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLN 120 E +R GQ +S R E L L LI AA+ +R L + E RYL+ Sbjct: 76 FREELLRVGQALTESVRLPEEAADRDPEHRLRHLLEALIGAAIDNRPTLTLVRWEVRYLD 135 Query: 121 DADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEEL 180 + D+ + + + ++ + + P L+ + + A+ S +TS+ H +PA+ L Sbjct: 136 EQDQQTLADQQHTVLEAIGAELRALRPELTADDTRVLRGAILSVVTSIADHHAAMPAKAL 195 Query: 181 KERLYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFS-RYETLLATGARLFRAQGYPAV 239 L AC+A A +L P + ++ S ++E LL LF +GYP V Sbjct: 196 VRLLSSACLALAH----ADLPPASAESEEAPPVEIPDSFKHELLLRKAVELFHDRGYPNV 251 Query: 240 STSEIGKGAGI-AGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGL 298 S EI AG+ A +YR + K +L A RR + S L Sbjct: 252 SVEEIAGAAGLSAASAVYRFYRGKSDLLAAAFRRAADRVSAAIGPAVAAAPNPEAAMSIL 311 Query: 299 VEGHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEA 358 +E V S +L V TE H + R Q W L+ ++ + S EA Sbjct: 312 IERFVAGSFAERELTFVYYTEFQHVPAEERTVLRNIQRLNVEEWSKLVRDVRTELSPAEA 371 Query: 359 RLLVAAAISFIEDVARTW 376 R LV AA + + D+ R + Sbjct: 372 RFLVHAAFALVVDLGRAF 389 >tr|A3PTY4|A3PTY4_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, TetR family; Flags: Precursor;[Mycobacterium sp.] Length = 451 Score = 144 bits (362), Expect = 3e-32 Identities = 121/386 (31%), Positives = 171/386 (44%), Gaps = 25/386 (6%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 VRRRPKDRK QI + F G+H V ++ IA G++A ALYRHY K L +A+ Sbjct: 43 VRRRPKDRKAQIARASAEAFSSLGYHGVSMDAIASRVGISAAALYRHYTGKYELFRDAVL 102 Query: 68 TGQDQYQSARRLTEGE----------QEPTPRPLSVDLPDLIAAAVASRSLTVLWQREAR 117 Q A +GE E R L + AA+A+R L++ EAR Sbjct: 103 ALGQQLVDATAFVDGEISDDGFGAHITEDPERTLVHLATAVCDAALANRESGGLYRWEAR 162 Query: 118 YLNDADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPA 177 +L D+ + +I + ++ + + P L + A+ S L S+ H LPA Sbjct: 163 FLRGDDQATLDSQIRTVHRRFQQPLRMLRPELDSRQRWTLSTAMISVLGSIVDHRAKLPA 222 Query: 178 EELKERLYQACMA--AARTP--PVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRA 233 +++ L + +A A P P P TAA R S+YE LL RLF Sbjct: 223 GQIRPLLAELVVALVPAEFPDLPDDPEPPAPTAAAHR-------SKYEALLMESMRLFNL 275 Query: 234 QGYPAVSTSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXX 293 +GY S +I G+ G+YR FS K IL RR + S E Sbjct: 276 KGYRDTSMEDIAAATGMPASGIYRYFSGKSDILAGAFRRSADRWSAEMSAILDTTADREE 335 Query: 294 XXXGLVEGHVRISLDAPDLVAVCVTE-LNHASGDVRDGYLRN-QADRDTLWIDLIGELVP 351 L++GHV S P+L V TE LN + D + LRN Q W DL+ L P Sbjct: 336 ALAKLIDGHVARSFSEPELDYVYYTERLNMSPADQQ--ILRNLQRSTVETWADLVVTLRP 393 Query: 352 QTSSVEARLLVAAAISFIEDVARTWH 377 + ++ +AR V AA++ D+ R H Sbjct: 394 EWTAGQARFAVYAALAVTTDLGRLVH 419 Score = 54.3 bits (129), Expect = 3e-05 Identities = 36/165 (21%), Positives = 72/165 (43%) Query: 6 APVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEA 65 AP + + + +L +++ LF +G+ +EDIA A G+ A +YR++ K +LA A Sbjct: 252 APTAAAHRSKYEALLMESMRLFNLKGYRDTSMEDIAAATGMPASGIYRYFSGKSDILAGA 311 Query: 66 IRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRI 125 R D++ + L+ + +A + + L ++ E ++ AD+ Sbjct: 312 FRRSADRWSAEMSAILDTTADREEALAKLIDGHVARSFSEPELDYVYYTERLNMSPADQQ 371 Query: 126 EVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGR 170 +R + V + V+ P + + +A + T LGR Sbjct: 372 ILRNLQRSTVETWADLVVTLRPEWTAGQARFAVYAALAVTTDLGR 416 >tr|C0ZPN1|C0ZPN1_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus erythropolis] Length = 399 Score = 142 bits (358), Expect = 7e-32 Identities = 114/376 (30%), Positives = 171/376 (45%), Gaps = 9/376 (2%) Query: 9 RRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRT 68 R RPK+RK QI A F +RG+H+V +++IA G++ ALYRH+ K AL + Sbjct: 9 RTRPKNRKAQIAAAAAEAFSERGYHAVGIDEIAAKVGISGPALYRHFPTKYALFVYTVNN 68 Query: 69 -GQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEV 127 Q ++ G +P + L+ + +I A + +R L++ E RYL D DR ++ Sbjct: 69 LTQALLDASDPAVHGNDDPREQ-LNSTMVGVIRATIENRRRGGLYRWEGRYLVDEDREQL 127 Query: 128 R---RRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERL 184 R R +N +AG +V P L PA EL A AV S + S+ H L A++++ + Sbjct: 128 REGMRTLNLRIAGPLAAVR---PELDPADVELIAPAVLSVIASITGHRSALSAKQIESLI 184 Query: 185 YQACMAAARTP-PVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSE 243 AC + PV + AA R S+ E LL LF +GY VS E Sbjct: 185 LAACWSVIGVELPVGAKDSGKKAAPERKPGLARTSKREVLLQEAVLLFDQRGYHDVSIEE 244 Query: 244 IGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHV 303 IG AGI +YR F+SK +L A R + ++ L + +V Sbjct: 245 IGAAAGINASSVYRHFASKADLLAAAFYRASDRLTMTLGSALAESETPLAAVETLAKMYV 304 Query: 304 RISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVA 363 +S +L+AV E+ R Q W L E P+ + V+AR LV Sbjct: 305 EVSFGRSELLAVYFAEIGSLPDRSRTELRNIQRLNVEEWAHLCVEARPELTIVQARFLVH 364 Query: 364 AAISFIEDVARTWHLT 379 AA+ + D+ R H + Sbjct: 365 AALGLVFDIGRIVHFS 380 >tr|Q1BEK4|Q1BEK4_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, TetR family; Flags: Precursor;[Mycobacterium sp.] Length = 451 Score = 141 bits (355), Expect = 2e-31 Identities = 120/386 (31%), Positives = 170/386 (44%), Gaps = 25/386 (6%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 VRRRPKDRK QI + F G+H V ++ IA G++A ALYRHY K L +A+ Sbjct: 43 VRRRPKDRKAQIARASAEAFSSLGYHGVSMDAIASRVGISAAALYRHYTGKYELFRDAVL 102 Query: 68 TGQDQYQSARRLTEGE----------QEPTPRPLSVDLPDLIAAAVASRSLTVLWQREAR 117 Q A +GE E R L + AA+A+R L++ EAR Sbjct: 103 ALGQQLVDATAFVDGEISDDGFGAHITEDPERTLVHLATAVCDAALANRESGGLYRWEAR 162 Query: 118 YLNDADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPA 177 +L D+ + +I + ++ + + P L + A+ S L S+ H LPA Sbjct: 163 FLRGDDQATLDSQIRTVHRRFQQPLRMLRPELDSRQRWTLSTAMISVLGSIVDHRAKLPA 222 Query: 178 EELKERLYQACMA--AARTP--PVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRA 233 +++ L + +A A P P P AA R S+YE LL RLF Sbjct: 223 GQIRPLLAELVVALVPAEFPDLPDDPEPPAPIAAAHR-------SKYEALLVESMRLFNL 275 Query: 234 QGYPAVSTSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXX 293 +GY S +I G+ G+YR FS K IL RR + S E Sbjct: 276 KGYRDTSMEDIAAATGMPASGIYRYFSGKSDILAGAFRRSADRWSAEMSAILDTTADREE 335 Query: 294 XXXGLVEGHVRISLDAPDLVAVCVTE-LNHASGDVRDGYLRN-QADRDTLWIDLIGELVP 351 L++GHV S P+L V TE LN + D + LRN Q W DL+ L P Sbjct: 336 ALAKLIDGHVARSFSEPELDYVYYTERLNMSPADQQ--ILRNLQRSTVETWADLVVTLRP 393 Query: 352 QTSSVEARLLVAAAISFIEDVARTWH 377 + ++ +AR V AA++ D+ R H Sbjct: 394 EWTAGQARFAVYAALAVTIDLGRLVH 419 Score = 53.1 bits (126), Expect = 6e-05 Identities = 35/165 (21%), Positives = 72/165 (43%) Query: 6 APVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEA 65 AP+ + + + +L +++ LF +G+ +EDIA A G+ A +YR++ K +LA A Sbjct: 252 APIAAAHRSKYEALLVESMRLFNLKGYRDTSMEDIAAATGMPASGIYRYFSGKSDILAGA 311 Query: 66 IRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRI 125 R D++ + L+ + +A + + L ++ E ++ AD+ Sbjct: 312 FRRSADRWSAEMSAILDTTADREEALAKLIDGHVARSFSEPELDYVYYTERLNMSPADQQ 371 Query: 126 EVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGR 170 +R + V + V+ P + + +A + LGR Sbjct: 372 ILRNLQRSTVETWADLVVTLRPEWTAGQARFAVYAALAVTIDLGR 416 >tr|A1UAC9|A1UAC9_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 428 Score = 141 bits (355), Expect = 2e-31 Identities = 120/386 (31%), Positives = 170/386 (44%), Gaps = 25/386 (6%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 VRRRPKDRK QI + F G+H V ++ IA G++A ALYRHY K L +A+ Sbjct: 20 VRRRPKDRKAQIARASAEAFSSLGYHGVSMDAIASRVGISAAALYRHYTGKYELFRDAVL 79 Query: 68 TGQDQYQSARRLTEGE----------QEPTPRPLSVDLPDLIAAAVASRSLTVLWQREAR 117 Q A +GE E R L + AA+A+R L++ EAR Sbjct: 80 ALGQQLVDATAFVDGEISDDGFGAHITEDPERTLVHLATAVCDAALANRESGGLYRWEAR 139 Query: 118 YLNDADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPA 177 +L D+ + +I + ++ + + P L + A+ S L S+ H LPA Sbjct: 140 FLRGDDQATLDSQIRTVHRRFQQPLRMLRPELDSRQRWTLSTAMISVLGSIVDHRAKLPA 199 Query: 178 EELKERLYQACMA--AARTP--PVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRA 233 +++ L + +A A P P P AA R S+YE LL RLF Sbjct: 200 GQIRPLLAELVVALVPAEFPDLPDDPEPPAPIAAAHR-------SKYEALLVESMRLFNL 252 Query: 234 QGYPAVSTSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXX 293 +GY S +I G+ G+YR FS K IL RR + S E Sbjct: 253 KGYRDTSMEDIAAATGMPASGIYRYFSGKSDILAGAFRRSADRWSAEMSAILDTTADREE 312 Query: 294 XXXGLVEGHVRISLDAPDLVAVCVTE-LNHASGDVRDGYLRN-QADRDTLWIDLIGELVP 351 L++GHV S P+L V TE LN + D + LRN Q W DL+ L P Sbjct: 313 ALAKLIDGHVARSFSEPELDYVYYTERLNMSPADQQ--ILRNLQRSTVETWADLVVTLRP 370 Query: 352 QTSSVEARLLVAAAISFIEDVARTWH 377 + ++ +AR V AA++ D+ R H Sbjct: 371 EWTAGQARFAVYAALAVTIDLGRLVH 396 Score = 53.1 bits (126), Expect = 6e-05 Identities = 35/165 (21%), Positives = 72/165 (43%) Query: 6 APVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEA 65 AP+ + + + +L +++ LF +G+ +EDIA A G+ A +YR++ K +LA A Sbjct: 229 APIAAAHRSKYEALLVESMRLFNLKGYRDTSMEDIAAATGMPASGIYRYFSGKSDILAGA 288 Query: 66 IRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRI 125 R D++ + L+ + +A + + L ++ E ++ AD+ Sbjct: 289 FRRSADRWSAEMSAILDTTADREEALAKLIDGHVARSFSEPELDYVYYTERLNMSPADQQ 348 Query: 126 EVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGR 170 +R + V + V+ P + + +A + LGR Sbjct: 349 ILRNLQRSTVETWADLVVTLRPEWTAGQARFAVYAALAVTIDLGR 393 >tr|A0QQN0|A0QQN0_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium smegmatis] Length = 486 Score = 140 bits (352), Expect = 4e-31 Identities = 114/376 (30%), Positives = 172/376 (45%), Gaps = 14/376 (3%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 VRRRPKDRK QI + F G+H V +E IA G++A ALYRHY +K L +A+ Sbjct: 81 VRRRPKDRKAQIARASAEAFSALGYHGVSMEAIASRVGISAAALYRHYSSKYELFRDAVL 140 Query: 68 TGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLT-----VLWQREARYLNDA 122 Q + P + + L+AAA+ SL L++ EARYLN+ Sbjct: 141 NLGQQLVDCTAFADTADAPENSEDAREQLRLLAAALTDTSLANRESGGLYRWEARYLNED 200 Query: 123 DRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKE 182 D+ + ++ + ++ + P L + + A S + S+ H LPA +++E Sbjct: 201 DQAALNAQMRTVHHRIQRPLQQLRPELISRERWMLSTATLSVIGSVVDHRGKLPAGQIRE 260 Query: 183 RLYQ--ACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 L + + AA P EL LG AA V ++YE LL RLF GY + Sbjct: 261 VLGEIVESVLAADLP---ELPELGAAAAPATTPVVSAAKYEALLNESMRLFNKNGYRDTT 317 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 +I G+ G+YR FS K IL A RR + S + L++ Sbjct: 318 MEDIAAAVGMPASGIYRYFSGKADILAAGFRRAADRLSADMAEILAAGGEPEDVLAALID 377 Query: 301 GHVRISLDAPDLVAVCVTE-LNHASGDVRDGYLRN-QADRDTLWIDLIGELVPQTSSVEA 358 +V S D P+L V TE LN D + LR+ Q W++++ + P S+ +A Sbjct: 378 DYVTRSFDRPELEHVYYTERLNMTPADQK--ILRDLQRSAVESWVNVVMPVRPHWSAGQA 435 Query: 359 RLLVAAAISFIEDVAR 374 R V AA++ + D+ R Sbjct: 436 RFAVHAAMALVIDLGR 451 >tr|C7Q7V6|C7Q7V6_CATAD Tax_Id=479433 SubName: Full=Transcriptional regulator, TetR family;[Catenulispora acidiphila] Length = 470 Score = 140 bits (352), Expect = 4e-31 Identities = 94/269 (34%), Positives = 131/269 (48%), Gaps = 12/269 (4%) Query: 11 RPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQ 70 R + R+ Q+ A GLF G+H+V + DIA AAG++ A+YRH+ KQALLAE +R+G Sbjct: 9 RTRARRDQLTAIAAGLFARDGYHNVTVGDIAAAAGLSGPAIYRHFPGKQALLAEVVRSGF 68 Query: 71 DQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVRRR 130 D+ L DL A V+W+RE R+L D E+ +R Sbjct: 69 DEMAGVLAADLAGTSDAAERLRRTYRDLAAFVTRRPEFGVMWRREYRHLAPEDAAELAKR 128 Query: 131 I----NAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQ 186 + +A+VA +R + P L PA +EL AWA S + S+ H + LP +E L Sbjct: 129 MGEASDAVVAELR----VLRPELEPADAELVAWAALSVMGSVSDHRVRLPRAAFEELLAG 184 Query: 187 ACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIGK 246 M E + D QD R E +LA ARLF +GY V+ EIG Sbjct: 185 IAMDVVSVEFGAGTESVDNRPQKIDAQD----RKEQILAAAARLFWDRGYHEVTLDEIGA 240 Query: 247 GAGIAGPGLYRSFSSKQAILDALIRRLDE 275 AGIAGP +Y F+ K +L + R+ E Sbjct: 241 AAGIAGPSVYSHFAGKTDLLRTITERIGE 269 Score = 61.6 bits (148), Expect = 2e-07 Identities = 66/256 (25%), Positives = 87/256 (33%), Gaps = 67/256 (26%) Query: 7 PVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALL---- 62 P + +DRK+QIL A LF DRG+H V L++I AAG+ ++Y H+ K LL Sbjct: 205 PQKIDAQDRKEQILAAAARLFWDRGYHEVTLDEIGAAAGIAGPSVYSHFAGKTDLLRTIT 264 Query: 63 ----------------AEAIRTGQDQYQSARRLTEGEQEP-------------------- 86 A R Q++ + A P Sbjct: 265 ERIGELLRRDLVASDAAAQERVAQERAEKASGSVAAASVPELALDSAAEQLLEPASAAAA 324 Query: 87 -TPRP------LSVDLPDLIAAAVA--------------------SRSLTVLWQREARYL 119 P P +S PD AAA+A SR L + E L Sbjct: 325 SAPDPAASIASVSAPAPDSAAAALAITATATLADLATRYVTTVLSSRDLVAAYFTEGHNL 384 Query: 120 NDADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEE 179 D DR E RR A A + PG SP +R A + + R L Sbjct: 385 PDRDRAETRRFQRAYAAHWSALLASADPGASPEEIRIRVLAAFAVVNDTARTRRLLERPG 444 Query: 180 LKERLYQACMAAARTP 195 L RL +A TP Sbjct: 445 LAGRLRALMLAVLLTP 460 >tr|Q5Z1X2|Q5Z1X2_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 426 Score = 138 bits (348), Expect = 1e-30 Identities = 113/399 (28%), Positives = 171/399 (42%), Gaps = 23/399 (5%) Query: 6 APVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEA 65 A VRRRPKDRK QI+ A F +RG++ V +++IA G++ ALYRH+ NK ALL A Sbjct: 41 AGVRRRPKDRKAQIVRAAARAFSERGYYPVGVDEIAAEVGISGPALYRHFANKYALLVAA 100 Query: 66 IRTG-QDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTV-----LWQREARYL 119 G + Q A+ + +P PR D + A++ ++ + L++ E RYL Sbjct: 101 AEEGARHLLQVAQAADDPALDPEPR------LDAVIKAISEHTIDIRREAGLYRWERRYL 154 Query: 120 NDADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEE 179 DR+ +RR + + + + PG PA + + AV S + S+ H L Sbjct: 155 EREDRLRIRRIYDELNDTIAAPIARLRPGADPADLRMLSAAVMSAVASIAAHRTALSGAR 214 Query: 180 LKERLYQACMAAART--PPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYP 237 L L C A RT PP P+ T + S+ E LL R+F QGY Sbjct: 215 LLPLLRDMCWAILRTELPPA----PVDTEDEPAPRGLPVTSKREQLLTEAIRIFGRQGYH 270 Query: 238 AVSTSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXG 297 S EIG GI +YR FSSK +L A R + S+ Sbjct: 271 EASIEEIGAAVGINASSVYRYFSSKADLLAAAFHRTGDRVSVAITEALAEATSRPDAVRR 330 Query: 298 LVEGHVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVE 357 + +++ P+++ V E ++ + Q W +L+ +E Sbjct: 331 IAARQAKLTFAMPEIMPVYYAEFSNLPQAEQHKLRAIQRQNVLEWANLL-----DGDPIE 385 Query: 358 ARLLVAAAISFIEDVARTWHLTRYAAVADEITAIALSIL 396 AR V AAI + DV R A +TA+ ++L Sbjct: 386 ARFRVHAAIGQVIDVGRLIRFDSRPAQLARVTALMEAVL 424 >tr|Q2JA50|Q2JA50_FRASC Tax_Id=106370 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp.] Length = 363 Score = 135 bits (341), Expect = 7e-30 Identities = 106/371 (28%), Positives = 150/371 (40%), Gaps = 21/371 (5%) Query: 37 LEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLP 96 + D+AEA V ALYRH+ KQ LL E I G R L + + Sbjct: 1 MTDLAEAVAVGPSALYRHFSGKQDLLREVIAAG---LAPLRHLLDDLDLADRADHATASA 57 Query: 97 DLIAAAVASRSLTVLWQREARYLNDADRIEVRRRINAIVAGMRESVLLEVPGLSPAHSEL 156 L A + R + VLWQREAR+L D +R + I + V P L ++L Sbjct: 58 RLAARCLDERHIGVLWQREARHLTPDDHALLRAEVREIGRRLTGRVRAARPELDAPTADL 117 Query: 157 RAWAVSSTLTSLGRHSLTLPAEELKERLYQ-----------ACMAAARTPPVCELEPLGT 205 WA+ + L S H L LP + L + AA+ PP P G Sbjct: 118 LTWAMLAVLMSPSFHHLDLPRPAYDDLLAELTDLVLDTPLPGTCAASPPPPAGPPPPAGP 177 Query: 206 AAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIGKGAGIAGPGLYRSFSSKQAI 265 L SR E LL R+F GY V ++G GI GP +Y F SK + Sbjct: 178 PLR-------LASRREALLTQAVRMFATHGYAGVGIEDVGNAVGITGPSVYHHFPSKLDM 230 Query: 266 LDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVRISLDAPDLVAVCVTELNHASG 325 L +R ++ LV ++R + DL+ + +TE+ H Sbjct: 231 LRTAFQRSTAALLMDVSAIYRTSNGAADALRRLVGSYIRFTQAHHDLIGLLITEVEHLPE 290 Query: 326 DVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVAAAISFIEDVARTWHLTRYAAVA 385 D R R Q D T W+ L+ + P+ AR+ V AA++ + D ART HL V Sbjct: 291 DERHAARRAQHDYLTEWVHLLRLVHPELDPTAARIRVHAAVAVVNDTARTPHLRHNPGVP 350 Query: 386 DEITAIALSIL 396 + +I +L Sbjct: 351 GAVESICGRLL 361 Score = 46.6 bits (109), Expect = 0.006 Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 8/164 (4%) Query: 11 RPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQ 70 R R++ +L QAV +F G+ V +ED+ A G+T ++Y H+ +K +L A + Sbjct: 180 RLASRREALLTQAVRMFATHGYAGVGIEDVGNAVGITGPSVYHHFPSKLDMLRTAFQRST 239 Query: 71 D----QYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIE 126 + R + G + R + I A L L E +L + +R Sbjct: 240 AALLMDVSAIYRTSNGAADALRRLVG----SYIRFTQAHHDLIGLLITEVEHLPEDERHA 295 Query: 127 VRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGR 170 RR + + + L P L P + +R A + + R Sbjct: 296 ARRAQHDYLTEWVHLLRLVHPELDPTAARIRVHAAVAVVNDTAR 339 >tr|B2HQM2|B2HQM2_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical regulatory protein;[Mycobacterium marinum] Length = 447 Score = 134 bits (338), Expect = 2e-29 Identities = 111/373 (29%), Positives = 172/373 (46%), Gaps = 15/373 (4%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 +RRRPKDRK QI A F +G+H+V +E IA GV+A ALYRHY K L A+ Sbjct: 26 IRRRPKDRKAQIARAAAESFSAQGYHAVSMETIAAKVGVSAPALYRHYAGKYELFRGAVL 85 Query: 68 TGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEV 127 Q +L + + + L + LI + +R L++ ++RYL D+ V Sbjct: 86 ALSQQLVDCTQLDDSDD--PAQLLDGLIASLIEVTLDNRLSGGLYRWQSRYLRAEDQAAV 143 Query: 128 RRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQA 187 + + +++ + + P L PA + + V S + S+ H L A+E++ L +A Sbjct: 144 ADVLKVVNRRIQKPLTVIRPSLRPAQRWMLSAGVLSVIGSIVDHPARLAADEIRALLGEA 203 Query: 188 CMAAARTPPVC-ELEPLGTAAGGRDGQDVL---FSRYETLLATGARLFRAQGYPAVSTSE 243 A VC EL G A + + S YETLL LF+ +GY S ++ Sbjct: 204 ASAI-----VCAELPEPGDVAVRKASWRIFAEDASVYETLLHASMVLFKDRGYAQTSMAQ 258 Query: 244 IGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHV 303 I +G+ G+YR FS K IL +RR + S + L++ +V Sbjct: 259 IASASGVPVSGIYRYFSGKCEILATGLRRAADRVSGQLSPIVGALTEPRQALTLLIDAYV 318 Query: 304 RISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTL--WIDLIGELVPQTSSVEARLL 361 S P+L AV TE A+ D L + T+ W+ L+ + P S+ AR L Sbjct: 319 ATSFANPELAAVYYTE--RANLTPADQMLLHNIQLSTIDSWVRLLTSVRPSLSATRARFL 376 Query: 362 VAAAISFIEDVAR 374 V AA++ + D+ R Sbjct: 377 VHAAMALVVDLGR 389 >tr|A4T394|A4T394_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium gilvum] Length = 424 Score = 134 bits (337), Expect = 2e-29 Identities = 107/381 (28%), Positives = 161/381 (42%), Gaps = 9/381 (2%) Query: 5 VAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAE 64 V RRRPKDRKQQI + F + G+H+V +EDIA GVTA +LYRHY K L Sbjct: 28 VRDARRRPKDRKQQIARASAEAFSELGYHAVSMEDIASRVGVTAASLYRHYSGKYDLFRA 87 Query: 65 AIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIA-AAVASRSLTVLWQREARYLNDAD 123 A+ +Q SA + E +P L + +A AA+ +R+ L++ EAR+L ++D Sbjct: 88 AVLNLGEQLVSATAFADDESGDSPEELWERIVAALADAAIKTRASGGLYRWEARFLQESD 147 Query: 124 RIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKER 183 + +I + ++ + P L +V S + S+ H LP +++ Sbjct: 148 QAISNEQIRLVNRRLQRPLSALRPELDSRQRWTVTASVLSAIGSICDHRAKLPVNDMRRL 207 Query: 184 LYQAC--MAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVST 241 L + A PPV E G A G YE +LA RLF G+ Sbjct: 208 LVSLARRLRDADLPPVSAREKPGRRAAPSVGP---AGEYEAILAAALRLFHEHGFRETGM 264 Query: 242 SEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEG 301 +I G+ +YR FS K A+L + RR + S + L++ Sbjct: 265 DDIASAIGLPASTIYRYFSGKSAVLSTIYRRAADRVSGDMGAILAMAPDERTAVGQLIDA 324 Query: 302 HVRISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLL 361 +V + P+L V E + + R Q W + P S EAR Sbjct: 325 YVWRTFAEPELAYVYYAEQLNVPAEDRAALHNIQRSIVEGWARQVVAARPDLSVREARFA 384 Query: 362 VAAAISFIEDVARTWHLTRYA 382 V A + + D+ R L R+A Sbjct: 385 VHAGLGLVVDIGR---LERFA 402 Score = 39.7 bits (91), Expect = 0.68 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 3/85 (3%) Query: 191 AARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIGKGAGI 250 A R+ VC + + G RD + R + + A F GY AVS +I G+ Sbjct: 13 AGRSVRVCRM---AASVGVRDARRRPKDRKQQIARASAEAFSELGYHAVSMEDIASRVGV 69 Query: 251 AGPGLYRSFSSKQAILDALIRRLDE 275 LYR +S K + A + L E Sbjct: 70 TAASLYRHYSGKYDLFRAAVLNLGE 94 >tr|A0PTR9|A0PTR9_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical regulatory protein;[Mycobacterium ulcerans] Length = 447 Score = 133 bits (334), Expect = 5e-29 Identities = 111/373 (29%), Positives = 172/373 (46%), Gaps = 15/373 (4%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 +RRRPKDRK QI A F +G+H+V +E IA GV+A ALYRHY K L A+ Sbjct: 26 IRRRPKDRKAQIARAAAESFSAQGYHAVSMETIAAKVGVSAPALYRHYAGKYELFRGAVL 85 Query: 68 TGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEV 127 Q +L + + + L+ + LI + +R L++ ++RYL D+ V Sbjct: 86 ALSQQLVDCTQLDDSDD--PAQLLARLIASLIEVTLDNRLSGGLYRWQSRYLRAEDQAAV 143 Query: 128 RRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQA 187 + + +++ + + L PA + + V S + S+ H L A+E++ L +A Sbjct: 144 ADVLKVVNRRIQKPLTVIRASLRPAQRWMLSAGVLSVIGSIVDHPARLAADEIRALLGEA 203 Query: 188 CMAAARTPPVC-ELEPLGTAAGGRDGQDVL---FSRYETLLATGARLFRAQGYPAVSTSE 243 A VC EL G A + + S YETLL LF+ +GY S ++ Sbjct: 204 ASAI-----VCAELPEPGDVAVRKASWRIFAEDASVYETLLHASMVLFKDRGYAQTSMAQ 258 Query: 244 IGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHV 303 I AG+ G+YR FS K IL +RR + S + L++ +V Sbjct: 259 IASAAGVPVSGIYRYFSGKCEILATGLRRAADRVSGQLSPIVGALTEPRQALTLLIDAYV 318 Query: 304 RISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTL--WIDLIGELVPQTSSVEARLL 361 S P+L AV TE A+ D L + T+ W+ L+ + P S+ AR L Sbjct: 319 ATSFANPELAAVYYTE--RANLTPADQMLLHNIQLSTIDSWVRLLTSVRPSLSATRARFL 376 Query: 362 VAAAISFIEDVAR 374 V AA++ + D+ R Sbjct: 377 VHAAMALVVDLGR 389 >tr|A1T307|A1T307_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium vanbaalenii] Length = 408 Score = 132 bits (332), Expect = 8e-29 Identities = 111/390 (28%), Positives = 175/390 (44%), Gaps = 38/390 (9%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIR 67 +RRRPKDRK QI + F G++ V +E IA G++A ALYRHY +K L +A+ Sbjct: 10 IRRRPKDRKAQIARASAEAFSALGYYGVSMEMIASRVGISAAALYRHYSSKYELFRDAVL 69 Query: 68 TGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAA----AVASRSLTVLWQREARYLNDAD 123 Q EG+ V L L++A A+A+R L++ E RYL D Sbjct: 70 NLGQQLVDGTAGIEGDDP------QVVLDRLVSALTDTALANRGSGGLYRWEGRYLRGDD 123 Query: 124 RIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKER 183 + + ++I+ + + + P L+ + A S + S+ H LPA ++ Sbjct: 124 QATLLQQIHTVHHRIHRPLSALRPELTARQRSTLSTAALSIVGSIVDHRAKLPAAQVHAL 183 Query: 184 LYQACMAA---------ARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQ 234 + Q A R PP ++ P A S+YE LL +LF Sbjct: 184 IAQISRAVLGAELSADPPRYPP--DVVPARPTAEP--------SKYEALLTASMQLFDRN 233 Query: 235 GYPAVSTSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXX 294 GY + +I G+ G+Y+ FS K IL + RR + S E Sbjct: 234 GYRDTTMEDIASAVGMPTSGIYKYFSGKSDILATIFRRAADRVSAELASVVATMSDPEEA 293 Query: 295 XXGLVEGHVRISLDAPDLVAVCVTE-LNHASGDVRDGYLRNQADRDTL--WIDLIGELVP 351 +++G+V+ S D P+L V +E LN ++ D R + R T+ W++L+ + P Sbjct: 294 LTAVIDGYVQRSFDQPELECVYYSERLNMSAADQR---IVRDLQRSTVESWVELVVAVRP 350 Query: 352 QTSSVEARLLVAAAISFIEDVARTWHLTRY 381 + S+ EAR V AA++ + D+ R L RY Sbjct: 351 EWSAAEARFAVHAAMALVVDLGR---LMRY 377 Score = 49.7 bits (117), Expect = 7e-04 Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 1/179 (0%) Query: 5 VAPVRRRPKDRKQQ-ILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLA 63 V P R + K + +L ++ LF G+ +EDIA A G+ +Y+++ K +LA Sbjct: 207 VVPARPTAEPSKYEALLTASMQLFDRNGYRDTTMEDIASAVGMPTSGIYKYFSGKSDILA 266 Query: 64 EAIRTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDAD 123 R D+ + L+ + + + L ++ E ++ AD Sbjct: 267 TIFRRAADRVSAELASVVATMSDPEEALTAVIDGYVQRSFDQPELECVYYSERLNMSAAD 326 Query: 124 RIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKE 182 + VR + V E V+ P S A + A + + LGR +EE +E Sbjct: 327 QRIVRDLQRSTVESWVELVVAVRPEWSAAEARFAVHAAMALVVDLGRLMRYENSEEARE 385 >tr|C0ZPB4|C0ZPB4_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus erythropolis] Length = 362 Score = 129 bits (325), Expect = 5e-28 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%) Query: 31 GFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQDQYQSARRLTEGEQEPTPRP 90 G+H+V +E IA A G+TA ALYRH+ NKQ LLA+A+ G + L E ++ + Sbjct: 10 GYHNVSMEGIASAVGITAGALYRHFPNKQELLAQAMLDGSSSILAI--LDEVDRTDS--- 64 Query: 91 LSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVRRRINAIVAGMRESVLLEVPGLS 150 V L+ + + ++L+ +EAR L R E R + + + + ++ E P LS Sbjct: 65 -RVVFTALVRYGLDNNFRSLLFDQEARNLTPERRTEARAGVREVTSRVAAALRHERPDLS 123 Query: 151 PAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQACMAAARTPPVCELEPLGTAAGGR 210 S + WA++S S RH TLP + E L RT PV EP Sbjct: 124 VPDSVVLGWALTSIAFSPARHRTTLPRKRF-EALLARLFDVVRTAPVLPEEPAAQPQPTS 182 Query: 211 DGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIGKGAGIAGPGLYRSFSSKQAILDALI 270 + SR E+L+ LF +GY +V+ +IG AG+ +Y F SK +L A++ Sbjct: 183 NFSHT--SRRESLMGAAITLFDQRGYRSVTMDDIGSAAGVPSSSIYTHFGSKAEVLQAIL 240 Query: 271 RRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVRISLDAPDLVAVCVTELNHASGDVRDG 330 R +E L + +V + + +A+ + E + + + Sbjct: 241 ARGNETLRLGLVQALRNADSREDAIARVVHSYTNSVISPDSAIAILIEETANLPEEAQAS 300 Query: 331 YLRNQADRDTLWIDLIGELVPQTSSVEARLLVAAAISFIEDVARTWHLTRYAAVADEITA 390 Q + W+ L+G + +AR V A IS I D+ R +R A+ D Sbjct: 301 THIAQREYIDEWVHLLG-----NETADARATVLATISMINDLTRVRLESRQCAIED---- 351 Query: 391 IALSILTSRS 400 +A+ IL +++ Sbjct: 352 LAVRILATQT 361 Score = 45.8 bits (107), Expect = 0.009 Identities = 19/57 (33%), Positives = 35/57 (61%) Query: 15 RKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQD 71 R++ ++ A+ LF RG+ SV ++DI AAGV + ++Y H+ +K +L + G + Sbjct: 189 RRESLMGAAITLFDQRGYRSVTMDDIGSAAGVPSSSIYTHFGSKAEVLQAILARGNE 245 >tr|Q5YPJ4|Q5YPJ4_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 417 Score = 129 bits (323), Expect = 9e-28 Identities = 106/370 (28%), Positives = 167/370 (45%), Gaps = 7/370 (1%) Query: 8 VRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALL-AEAI 66 VR+RP+DR+ QI + F G+H V +EDIA +++ ALYRHY +K AL EA+ Sbjct: 23 VRKRPRDRRAQIAAASAEAFGALGYHGVSMEDIASRLDISSTALYRHYPSKYALFREEAL 82 Query: 67 RTGQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIE 126 R Q+ P + L+ L L+ ++ R L + ++RYL D Sbjct: 83 RLSALCEQAVHLPEHLLDAPAQQRLAHILDALVDRSITDRRGASLLRWQSRYLRPEDYRV 142 Query: 127 VRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQ 186 + ++ + A +R + P LS A + A +V S + S+ H +++P L + L Sbjct: 143 LIGQLGDVYAMLRSLLADSRPELSRADRAVLATSVLSVIGSISDHHVSIPMRALAKLLRS 202 Query: 187 ACMAAARTPPVCELEPLGTAAGGRDGQDV-LFSRYETLLATGARLFRAQGYPAVSTSEIG 245 A A CEL P+G +V L ++E LL LF +GYP +S +I Sbjct: 203 ASDAVL----ACELPPIGERTAAHTPSEVPLTFKHELLLKRSIELFHERGYPNMSVEDIA 258 Query: 246 KGAGI-AGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVR 304 AG+ A +YR + SK IL A RR + S L+E +V Sbjct: 259 NAAGLPASSAVYRFYRSKGDILAAAFRRAADRVSAAIGPAIAGADGPEQALVTLIELYVA 318 Query: 305 ISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVAA 364 S +L V E+++ + R Q W L+ + P+ S EAR+LV A Sbjct: 319 GSFAERELTFVYYAEISNVPPEDRTVLRNIQRLNVEEWAKLVVGVRPELSPAEARVLVHA 378 Query: 365 AISFIEDVAR 374 A++ + D+ + Sbjct: 379 ALAQVVDIGQ 388 >tr|C2AJ19|C2AJ19_TSUPA Tax_Id=521096 SubName: Full=Transcriptional regulator, COG1309;[Tsukamurella paurometabola DSM 20162] Length = 396 Score = 129 bits (323), Expect = 9e-28 Identities = 106/393 (26%), Positives = 163/393 (41%), Gaps = 10/393 (2%) Query: 9 RRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRT 68 R+RPKDR++QI A F RG+H V +E IA + ++ A+YRH+ NK ALL AI + Sbjct: 6 RKRPKDRREQIARVAAEDFSRRGYHGVGIEQIAASLDISGPAVYRHFPNKYALLEHAITS 65 Query: 69 GQDQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVA--SRSLTVLWQREARYLNDADRIE 126 D +A E E +D + A VA R+ L++ E R L DR Sbjct: 66 ASDALSAAVAQAAQETEGQDAEARIDAIEDAALRVAFERRNTGGLFRWEQRLLERQDRNR 125 Query: 127 VRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLP---AEELKER 183 +R ++ ++ ++ +PG+ A ELR V S S+ H L AE + Sbjct: 126 IRDQLTQMIGTFADAAEPALPGVGRAERELRCVGVISVTGSVTAHRTVLAQRRAEAVLRT 185 Query: 184 LYQACMAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSE 243 + +A P L P ++ G D R E +L L + G+ VS + Sbjct: 186 AGRRLLALPAPPTEYVLAPPPSSVAGTDA-----GRQEQVLDEAVELIFSHGFHNVSMGQ 240 Query: 244 IGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHV 303 IG+ AGI G+YR F +K IL + R L + +V Sbjct: 241 IGQAAGIVPSGMYRYFPNKAGILVRALERSGAAMVDAIAAVVEANPEPRARLAALAQAYV 300 Query: 304 RISLDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVA 363 ++S L+ V E+ + R Q + D + + P + EA LV Sbjct: 301 QLSFGQSKLMTVYFREIGNVPDSDRSRLASVQRANIAAFADAVMAVRPDLGAAEATFLVH 360 Query: 364 AAISFIEDVARTWHLTRYAAVADEITAIALSIL 396 AA + + DV RT E+ A+ ++L Sbjct: 361 AAFAVVFDVGRTRRFDADPHFQAEVFAMVCAVL 393 >tr|D0L6S8|D0L6S8_GORB4 Tax_Id=526226 SubName: Full=Regulatory protein TetR;[Gordonia bronchialis] Length = 390 Score = 127 bits (320), Expect = 2e-27 Identities = 109/381 (28%), Positives = 163/381 (42%), Gaps = 38/381 (9%) Query: 9 RRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRT 68 R R D K+Q++ A LF+ RG+ V L DIA +AGVTA ++YRH+D+KQALL A+ Sbjct: 9 RTRGADTKRQLVASAAELFLRRGYPQVSLADIARSAGVTAPSVYRHFDDKQALLEAAVLA 68 Query: 69 GQDQYQ--SARRLTEGEQEPTPRPLSVDLPDLIAA----AVASRSLTVLWQREARYLNDA 122 G D+ + + R L +G D +LIA+ V LW+ + YL Sbjct: 69 GVDELEVCTERALADG----------ADTDELIASVCTLGVQRPQAASLWRWTSNYLTVE 118 Query: 123 DRIEVRRRINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKE 182 +V R ++ ++ L+ + AWA S SL H + A +E Sbjct: 119 QNKQVALRTREVIGKWASALADGRDDLTDREAVQLAWASLSVCGSLTVHHSRMSAARARE 178 Query: 183 RLYQAC--MAAARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVS 240 L + + A R L+ A V +R + +L A LF A+GY V Sbjct: 179 ELEKMIRRVVALRPASAPALDVAAPVAA------VTATRRDEILDAAAELFAARGYTDVG 232 Query: 241 TSEIGKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVE 300 EIG GIAGP +Y+ F SK AIL + +R W I L++ Sbjct: 233 IDEIGAAVGIAGPSVYKHFPSKLAILVGIGQRSAMWLEAGVIASFAATSDPAKLLALLID 292 Query: 301 GHVRISLDAPDLVAV--CVTELNHASG-----DVRDGYLRNQADRDTLWIDLIGELVPQT 353 +V + DL T + SG D++ Y+ WIDL+ ++ P Sbjct: 293 SYVTVITSTTDLSVAFNSSTAMRGQSGAAELLDIQRRYVAR-------WIDLLIQVDPGL 345 Query: 354 SSVEARLLVAAAISFIEDVAR 374 + + V AA+S + D R Sbjct: 346 RRDQGAVAVHAALSIVNDAVR 366 Score = 45.8 bits (107), Expect = 0.009 Identities = 21/59 (35%), Positives = 35/59 (59%) Query: 4 VVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALL 62 V APV R+ +IL+ A LF RG+ V +++I A G+ ++Y+H+ +K A+L Sbjct: 200 VAAPVAAVTATRRDEILDAAAELFAARGYTDVGIDEIGAAVGIAGPSVYKHFPSKLAIL 258 >tr|Q9X7X6|Q9X7X6_STRCO Tax_Id=1902 SubName: Full=Putative regulatory protein;[Streptomyces coelicolor] Length = 404 Score = 126 bits (317), Expect = 4e-27 Identities = 101/365 (27%), Positives = 157/365 (43%), Gaps = 10/365 (2%) Query: 11 RPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQ 70 RP++R+Q I+E A +F +RG+H +E+IA G+TA ALYRH+ NK AL AE Sbjct: 27 RPRNRRQLIVEAAGRVFSERGYHRASMEEIAAGVGITAAALYRHFPNKYALFAECADVMA 86 Query: 71 DQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVRRR 130 +A ++ P PL+ L + VA R+ +++ EARYLN DR +R + Sbjct: 87 QGLVAAL-----DEVPPGAPLTDVLDAVAGVTVAYRASGGVYRWEARYLNREDRRRLRAK 141 Query: 131 INAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQACMA 190 IV + E+V E P PA LRA A + S+ H ++ A + L + + Sbjct: 142 FGRIVGRVDEAVRREYP---PADERLRAVAALGAIGSVTMHRTSIAARRAESLLSASALR 198 Query: 191 AARTPPVCELEPLGTAAGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEIGKGAGI 250 A P + G Q V +R +LA LF G+ V+ +I + G+ Sbjct: 199 VAAAGPAAAGD--GVRPVELPAQPVPRTRRAEILAAAVPLFARDGFANVTNGQIAREVGL 256 Query: 251 AGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVRISLDAP 310 A LYR + K IL A + + L +V S + Sbjct: 257 APSALYRHYPGKVDILAAACLQAAGLLAQGVERSLREVTGPHEAVAALAATYVAYSFEYT 316 Query: 311 DLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVAAAISFIE 370 L +V EL D+R + Q + +W + P+ +AR+LV A + Sbjct: 317 ALNSVAEAELAGLPADLRRPLIHAQREHIAVWEQQLRLARPELDPRQARVLVHAGFGVVV 376 Query: 371 DVART 375 + R+ Sbjct: 377 EAGRS 381 Score = 45.4 bits (106), Expect = 0.012 Identities = 26/62 (41%), Positives = 33/62 (53%) Query: 4 VVAPVRRRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLA 63 V P + P+ R+ +IL AV LF GF +V IA G+ ALYRHY K +LA Sbjct: 214 VELPAQPVPRTRRAEILAAAVPLFARDGFANVTNGQIAREVGLAPSALYRHYPGKVDILA 273 Query: 64 EA 65 A Sbjct: 274 AA 275 >tr|C9N5U7|C9N5U7_9ACTO Tax_Id=591167 SubName: Full=Transcriptional regulator, TetR family;[Streptomyces flavogriseus ATCC 33331] Length = 387 Score = 125 bits (314), Expect = 9e-27 Identities = 104/390 (26%), Positives = 166/390 (42%), Gaps = 18/390 (4%) Query: 11 RPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQ 70 RP++RKQ I+E A +F +RG+H +E IA G+TA ALYRH+ NK AL AE Sbjct: 10 RPRNRKQLIVEAAGRIFSERGYHMASMEKIAAGVGITAAALYRHFPNKYALFAECADLMA 69 Query: 71 DQYQSARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVRRR 130 D R + ++ P+ P + L + VA R+ +++ EARYLN DR ++R + Sbjct: 70 D-----RLVAAVDEVPSGAPSADVLTAVTRVTVAHRASGGVYRWEARYLNHEDRRQLRAK 124 Query: 131 INAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQACMA 190 ++ + E+V E P LRA A + S+ H ++ +E L ++ + Sbjct: 125 FRHVIGRVDEAVQRERP---LPDGRLRAVAALGAIGSITMHHTSIAQRRAEELLVESALR 181 Query: 191 AARTPPVCELEPLGTAAGGRDGQDVLF----SRYETLLATGARLFRAQGYPAVSTSEIGK 246 A +P G R + V +R +LA LF G+ +V+ +I + Sbjct: 182 VAAA------DPAAPRPGARTVEVVAHPVPRTRRAEILAAAIPLFARDGFASVTNGQIAE 235 Query: 247 GAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVRIS 306 G+A LYR +S K IL A + + E L +V S Sbjct: 236 AVGLAPSALYRHYSGKVDILAAACLQAAGLLAREVDQSLHEVSGPHDAIGALAATYVAYS 295 Query: 307 LDAPDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVAAAI 366 + L +V EL D+R + Q + +W + P+ +AR+LV A Sbjct: 296 FEYTALNSVAEAELVGLPADLRRPLVLAQREHIAVWEQQLRLARPELDPRQARVLVHAGF 355 Query: 367 SFIEDVARTWHLTRYAAVADEITAIALSIL 396 + R D +TA+ + L Sbjct: 356 GVAVEAGRGLRWQDGPDHRDAVTALVMGAL 385 >tr|Q1BBT5|Q1BBT5_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 394 Score = 124 bits (311), Expect = 2e-26 Identities = 102/395 (25%), Positives = 177/395 (44%), Gaps = 17/395 (4%) Query: 11 RPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQ 70 R RK Q+ + A LF +RG+H+V ++D+A A G+T ALYRH+ K +LA+AI Sbjct: 10 RSSVRKLQLSQAAARLFTERGYHNVSMDDVASAVGLTGPALYRHFRKKHDILAQAISEQL 69 Query: 71 DQYQS-ARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVRR 129 ++ A R E + P R S +A V R +LW+RE R L+++++ E R Sbjct: 70 ASVEAVAVRAVEADLAPPER--SAMFLSELADLVLEREEVLLWKRERRELSESEQDEFRS 127 Query: 130 RINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQACM 189 R+N ++ +++ L G + +ELRAW+V + +S+ + K L Sbjct: 128 RLNDVLRLTVQALGLGDDGEPTSDAELRAWSVLAVYSSVSPARRGMDDASAKRILQSMAD 187 Query: 190 AAARTPPVCELEPLGTA-----AGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEI 244 CEL+ T A R R E +L+T RLF AQ Y +V EI Sbjct: 188 GVLN----CELDAAATTSRPPLAPPRRPP----GRRERILSTATRLFHAQSYHSVGIEEI 239 Query: 245 GKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVR 304 + A Y+ F+ K +L A++ R E + + Sbjct: 240 AAESDTAIATFYQYFTGKAELLQAVLNRGAEGLHYVTNHRLPTASTPQEAVDIIACTLIE 299 Query: 305 ISLDA-PDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVA 363 ++L ++A+ +L + ++ +Q + W+ I + P+ S+ ARLL Sbjct: 300 LALGPHQPILAILAADLIYLPEKAQEAIRTSQREYIDEWVVAINGVRPELSAHHARLLAR 359 Query: 364 AAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 A+I + D+ +T + + +A E+ + ++L + Sbjct: 360 ASIGLVTDITQTQSMRKRPGIAGELHRLVSAVLAA 394 Score = 42.7 bits (99), Expect = 0.080 Identities = 20/62 (32%), Positives = 33/62 (53%) Query: 10 RRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTG 69 RRP R+++IL A LF + +HSV +E+IA + Y+++ K LL + G Sbjct: 209 RRPPGRRERILSTATRLFHAQSYHSVGIEEIAAESDTAIATFYQYFTGKAELLQAVLNRG 268 Query: 70 QD 71 + Sbjct: 269 AE 270 >tr|A1UD62|A1UD62_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 394 Score = 124 bits (311), Expect = 2e-26 Identities = 102/395 (25%), Positives = 177/395 (44%), Gaps = 17/395 (4%) Query: 11 RPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTGQ 70 R RK Q+ + A LF +RG+H+V ++D+A A G+T ALYRH+ K +LA+AI Sbjct: 10 RSSVRKLQLSQAAARLFTERGYHNVSMDDVASAVGLTGPALYRHFRKKHDILAQAISEQL 69 Query: 71 DQYQS-ARRLTEGEQEPTPRPLSVDLPDLIAAAVASRSLTVLWQREARYLNDADRIEVRR 129 ++ A R E + P R S +A V R +LW+RE R L+++++ E R Sbjct: 70 ASVEAVAVRAVEADLAPPER--SAMFLSELADLVLEREEVLLWKRERRELSESEQDEFRS 127 Query: 130 RINAIVAGMRESVLLEVPGLSPAHSELRAWAVSSTLTSLGRHSLTLPAEELKERLYQACM 189 R+N ++ +++ L G + +ELRAW+V + +S+ + K L Sbjct: 128 RLNDVLRLTVQALGLGDDGEPTSDAELRAWSVLAVYSSVSPARRGMDDASAKRILQSMAD 187 Query: 190 AAARTPPVCELEPLGTA-----AGGRDGQDVLFSRYETLLATGARLFRAQGYPAVSTSEI 244 CEL+ T A R R E +L+T RLF AQ Y +V EI Sbjct: 188 GVLN----CELDAAATTSRPPLAPPRRPP----GRRERILSTATRLFHAQSYHSVGIEEI 239 Query: 245 GKGAGIAGPGLYRSFSSKQAILDALIRRLDEWRSLECIXXXXXXXXXXXXXXGLVEGHVR 304 + A Y+ F+ K +L A++ R E + + Sbjct: 240 AAESDTAIATFYQYFTGKAELLQAVLNRGAEGLHYVTNHRLPTASTPQEAVDIIACTLIE 299 Query: 305 ISLDA-PDLVAVCVTELNHASGDVRDGYLRNQADRDTLWIDLIGELVPQTSSVEARLLVA 363 ++L ++A+ +L + ++ +Q + W+ I + P+ S+ ARLL Sbjct: 300 LALGPHQPILAILAADLIYLPEKAQEAIRTSQREYIDEWVVAINGVRPELSAHHARLLAR 359 Query: 364 AAISFIEDVARTWHLTRYAAVADEITAIALSILTS 398 A+I + D+ +T + + +A E+ + ++L + Sbjct: 360 ASIGLVTDITQTQSMRKRPGIAGELHRLVSAVLAA 394 Score = 42.7 bits (99), Expect = 0.080 Identities = 20/62 (32%), Positives = 33/62 (53%) Query: 10 RRPKDRKQQILEQAVGLFIDRGFHSVKLEDIAEAAGVTARALYRHYDNKQALLAEAIRTG 69 RRP R+++IL A LF + +HSV +E+IA + Y+++ K LL + G Sbjct: 209 RRPPGRRERILSTATRLFHAQSYHSVGIEEIAAESDTAIATFYQYFTGKAELLQAVLNRG 268 Query: 70 QD 71 + Sbjct: 269 AE 270 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.319 0.133 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 2,747,256,591 Number of extensions: 108813112 Number of successful extensions: 322445 Number of sequences better than 10.0: 10934 Number of HSP's gapped: 323777 Number of HSP's successfully gapped: 12668 Length of query: 400 Length of database: 3,846,993,858 Length adjustment: 140 Effective length of query: 260 Effective length of database: 2,268,465,438 Effective search space: 589801013880 Effective search space used: 589801013880 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 81 (35.8 bits)