BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_3073 (187 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HFU4|B2HFU4_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 222 2e-56 tr|B2HFT6|B2HFT6_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 92 4e-17 tr|B2HFT4|B2HFT4_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 79 3e-13 tr|A0PQR5|A0PQR5_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 73 2e-11 tr|A0PQR3|A0PQR3_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 72 4e-11 tr|A0QNB3|A0QNB3_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 68 5e-10 tr|Q73RV0|Q73RV0_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 62 3e-08 tr|Q7TVE0|Q7TVE0_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE MEMBRA... 34 6.7 tr|O05444|O05444_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE MEMBRA... 34 6.7 tr|C6DPD1|C6DPD1_MYCTK Tax_Id=478434 SubName: Full=Membrane prot... 34 6.7 tr|C1AJ41|C1AJ41_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 34 6.7 tr|A5U9M9|A5U9M9_MYCTA Tax_Id=419947 SubName: Full=Putative memb... 34 6.7 tr|A1KQN0|A1KQN0_MYCBP Tax_Id=410289 SubName: Full=Possible memb... 34 6.7 tr|Q7D4M6|Q7D4M6_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 34 6.7 tr|A5WUC2|A5WUC2_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 34 6.7 tr|A4KN12|A4KN12_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 34 6.7 tr|A2VMS3|A2VMS3_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 34 8.8 >tr|B2HFU4|B2HFU4_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium marinum] Length = 187 Score = 222 bits (565), Expect = 2e-56 Identities = 119/187 (63%), Positives = 120/187 (64%) Query: 1 VRTTRGSALAPGPNTLARVTADYPPTPQWTPSLQAVPRPQNWPXXXXXXXXXXXXXXXXI 60 +RTTRGSALAPGPNTLARVTADYPPTPQWTPSLQAVPRPQNWP I Sbjct: 1 MRTTRGSALAPGPNTLARVTADYPPTPQWTPSLQAVPRPQNWPALTLAAIAVGLAAAALI 60 Query: 61 VSLRHXXXXXXXXXXXXXXXXXXIAAHQALCETYKLAARSVQIETNGTNPXXXXXXXXXX 120 VSLRH IAAHQALCETYKLAARSVQIETNGTNP Sbjct: 61 VSLRHPTITASAPTPPTYTSAESIAAHQALCETYKLAARSVQIETNGTNPALASAAAANG 120 Query: 121 XXXXXXXVALGSXXXXXXXXXXXXXXXXYTNTNALGSYLHAEDPTYEAASDDVNAKDAKM 180 VALGS YTNTNALGSYLHAEDPTYEAASDDVNAKDAKM Sbjct: 121 ALMLEQAVALGSALDPADRDAALALARAYTNTNALGSYLHAEDPTYEAASDDVNAKDAKM 180 Query: 181 KARCAGG 187 KARCAGG Sbjct: 181 KARCAGG 187 >tr|B2HFT6|B2HFT6_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium marinum] Length = 179 Score = 91.7 bits (226), Expect = 4e-17 Identities = 60/174 (34%), Positives = 77/174 (44%), Gaps = 10/174 (5%) Query: 24 PPTPQWTPSL--QAVPRPQNWPXXXXXXXXXXXXXXXX---IVSLRHXXXXXXXXXXXXX 78 PP QW P+ QA PRP WP IV+L+ Sbjct: 6 PPAEQWIPNYPPQAAPRPSAWPLVALAITAIVGVVLGTTALIVALKDPTNSGSASTSPTT 65 Query: 79 XXXXXIA-----AHQALCETYKLAARSVQIETNGTNPXXXXXXXXXXXXXXXXXVALGSX 133 A AH+ LC+TYKLAAR+VQI+TNG +P V Sbjct: 66 AAPSYTATQTAAAHRKLCDTYKLAARAVQIQTNGDSPALAGVAAVNGAIMLQATVNATPA 125 Query: 134 XXXXXXXXXXXXXXXYTNTNALGSYLHAEDPTYEAASDDVNAKDAKMKARCAGG 187 Y+NT AL S++H+EDP ++AA +DVNAKDA+MKA C+GG Sbjct: 126 LASADRKTALALAEAYSNTTALSSFVHSEDPEWQAALNDVNAKDAQMKAVCSGG 179 >tr|B2HFT4|B2HFT4_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium marinum] Length = 180 Score = 78.6 bits (192), Expect = 3e-13 Identities = 56/180 (31%), Positives = 72/180 (40%), Gaps = 11/180 (6%) Query: 19 VTADYPPTPQWTPSL--QAVPRPQNWPXXXXXXXXXXXXXXXX---IVSLRHXXXXXXXX 73 +T + PP QW P+ Q V P+ WP +V+L H Sbjct: 1 MTTNPPPAAQWVPNYPPQPVASPRTWPLVALAIIAIVGVVLGAAALVVALTHPGNAGSAA 60 Query: 74 XXXXXXXXXXIA-----AHQALCETYKLAARSVQIETNGTNPXXXXXXXXXXXXXXXXXV 128 A AHQ LC+ YKLAARSVQI+TNG +P + Sbjct: 61 APTTTASPTYTAEEIAAAHQKLCDVYKLAARSVQIDTNGGDPALARVTGVNGAVMLEQAL 120 Query: 129 ALGSXXXXXXXXXXXXXXXXYTNTNALGSYLHAE-DPTYEAASDDVNAKDAKMKARCAGG 187 YTN NA+ S+ DP + AA+DDV AKDA+M+A C GG Sbjct: 121 RTAPALAPDERDAAFALAEAYTNANAVASFSTGRGDPAWRAAADDVIAKDAQMRATCGGG 180 >tr|A0PQR5|A0PQR5_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium ulcerans] Length = 169 Score = 72.8 bits (177), Expect = 2e-11 Identities = 41/103 (39%), Positives = 48/103 (46%) Query: 85 AAHQALCETYKLAARSVQIETNGTNPXXXXXXXXXXXXXXXXXVALGSXXXXXXXXXXXX 144 AAHQ LCE YKLAAR VQI+T+G N V Sbjct: 67 AAHQKLCEVYKLAAREVQIQTHGNNQALAVAAVVNGALMLQQAVDASPALTSSDRAAALA 126 Query: 145 XXXXYTNTNALGSYLHAEDPTYEAASDDVNAKDAKMKARCAGG 187 +TN NA GS H +D +AA D+ NAKD +MKA C GG Sbjct: 127 LAEAFTNANAFGSNAHLDDAASQAAIDNANAKDEQMKAICGGG 169 >tr|A0PQR3|A0PQR3_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium ulcerans] Length = 170 Score = 71.6 bits (174), Expect = 4e-11 Identities = 42/104 (40%), Positives = 51/104 (49%), Gaps = 1/104 (0%) Query: 85 AAHQALCETYKLAARSVQIETNGTNPXXXXXXXXXXXXXXXXXVALGSXXXXXXXXXXXX 144 AAHQ LCE YKLAARSVQI+TNG + + Sbjct: 67 AAHQKLCEVYKLAARSVQIDTNGGDAALAGVTGVNGAVMLEQALRTAPALAPDERDAAFA 126 Query: 145 XXXXYTNTNALGSYLHAE-DPTYEAASDDVNAKDAKMKARCAGG 187 YTN NA+ S+ DP + AA+DDV AKDA+M+A C GG Sbjct: 127 LAEAYTNANAVASFSTGRGDPAWRAAADDVIAKDAEMRATCGGG 170 >tr|A0QNB3|A0QNB3_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 217 Score = 67.8 bits (164), Expect = 5e-10 Identities = 48/171 (28%), Positives = 67/171 (39%), Gaps = 8/171 (4%) Query: 24 PPTP-QWTPSLQAVP-RPQNWPXXXXXXXXXXXXXXXXIVSLRHXXXXXXXXXXXXXXXX 81 PP P QW P+ P R + WP +V+L Sbjct: 47 PPNPTQWAPAFPPQPPRSRTWPAVALAAVAVLLGGAALVVALTRPTGGSSTVSSTTTTTP 106 Query: 82 XXIA-----AHQALCETYKLAARSVQIETNGTNPXXXXXXXXXXXXXXXXXVALGSXXXX 136 A AHQ LC++YKLA+R+VQI+TNG NP V Sbjct: 107 SYTAEQTAAAHQKLCDSYKLASRAVQIDTNGDNPAFAGISTVNAAVILEQAVRTSPELSA 166 Query: 137 XXXXXXXXXXXXYTNTNALGSYLHA-EDPTYEAASDDVNAKDAKMKARCAG 186 Y++ A S + +DP + +A++DVNAKD++MK C G Sbjct: 167 ADRAAALALAAAYSHAQATASLVQTRDDPVWRSAANDVNAKDSEMKRVCGG 217 >tr|Q73RV0|Q73RV0_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 188 Score = 62.0 bits (149), Expect = 3e-08 Identities = 53/186 (28%), Positives = 69/186 (37%), Gaps = 11/186 (5%) Query: 9 LAPGPNTLARVTADYPPTP-QWTPSLQAVP-RPQNWPXXXXXXXXXXXXXXXXIVSLRHX 66 L PGP +T PP P QW P+ P R + WP +V+L Sbjct: 5 LPPGPGQ-GPMTG--PPNPTQWAPAFPPQPPRSRTWPAVALAAVAVLLGGAALVVALTRP 61 Query: 67 XXXXXXXXXXXXXXXXXIA-----AHQALCETYKLAARSVQIETNGTNPXXXXXXXXXXX 121 A AHQ LC+TY+LAAR+VQIETNG N Sbjct: 62 TGGSSTASSTTSTTPSYTAEQTAAAHQKLCDTYRLAARAVQIETNGKNSDRANLATVNGA 121 Query: 122 XXXXXXVALGSXXXXXXXXXXXXXXXXYTNTNALGSY-LHAEDPTYEAASDDVNAKDAKM 180 V Y+N A S ++DP +++A D+ N K+A M Sbjct: 122 VMLEEAVNANPAIAPGDRAAALALAESYSNVAATSSVATGSDDPAWQSALDNANNKNAAM 181 Query: 181 KARCAG 186 K C G Sbjct: 182 KTVCGG 187 >tr|Q7TVE0|Q7TVE0_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE MEMBRANE PROTEIN;[Mycobacterium bovis] Length = 149 Score = 34.3 bits (77), Expect = 6.7 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 31 PSLQAVPRPQNWPXXXXXXXXXXXXXXXXIVSLRHXXXXXXXXXXXXXXXXXX--IAAHQ 88 P+ +PR ++WP IV+L + AA + Sbjct: 18 PAPWPIPRTRSWPAIVVAAIAAVVAVAALIVALTNARPAATPATTSVPTYTAAQTAAAQR 77 Query: 89 ALCETYKLAARSVQIETNGTN 109 LC+TYKL A +V ++TNG++ Sbjct: 78 QLCDTYKLVAHAVPVDTNGSD 98 >tr|O05444|O05444_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE MEMBRANE PROTEIN;[Mycobacterium tuberculosis] Length = 149 Score = 34.3 bits (77), Expect = 6.7 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 31 PSLQAVPRPQNWPXXXXXXXXXXXXXXXXIVSLRHXXXXXXXXXXXXXXXXXX--IAAHQ 88 P+ +PR ++WP IV+L + AA + Sbjct: 18 PAPLPIPRTRSWPAIVVAAIAAVVAVAALIVALTNARPAATPATTSVPTYTAAQTAAAQR 77 Query: 89 ALCETYKLAARSVQIETNGTN 109 LC+TYKL A +V ++TNG++ Sbjct: 78 QLCDTYKLVAHAVPVDTNGSD 98 >tr|C6DPD1|C6DPD1_MYCTK Tax_Id=478434 SubName: Full=Membrane protein;[Mycobacterium tuberculosis] Length = 149 Score = 34.3 bits (77), Expect = 6.7 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 31 PSLQAVPRPQNWPXXXXXXXXXXXXXXXXIVSLRHXXXXXXXXXXXXXXXXXX--IAAHQ 88 P+ +PR ++WP IV+L + AA + Sbjct: 18 PAPLPIPRTRSWPAIVVAAIAAVVAVAALIVALTNARPAATPATTSVPTYTAAQTAAAQR 77 Query: 89 ALCETYKLAARSVQIETNGTN 109 LC+TYKL A +V ++TNG++ Sbjct: 78 QLCDTYKLVAHAVPVDTNGSD 98 >tr|C1AJ41|C1AJ41_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 131 Score = 34.3 bits (77), Expect = 6.7 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 31 PSLQAVPRPQNWPXXXXXXXXXXXXXXXXIVSLRHXXXXXXXXXXXXXXXXXX--IAAHQ 88 P+ +PR ++WP IV+L + AA + Sbjct: 18 PAPWPIPRTRSWPAIVVAAIAAVVAVAALIVALTNARPAATPATTSVPTYTAAQTAAAQR 77 Query: 89 ALCETYKLAARSVQIETNGTN 109 LC+TYKL A +V ++TNG++ Sbjct: 78 QLCDTYKLVAHAVPVDTNGSD 98 >tr|A5U9M9|A5U9M9_MYCTA Tax_Id=419947 SubName: Full=Putative membrane protein;[Mycobacterium tuberculosis] Length = 149 Score = 34.3 bits (77), Expect = 6.7 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 31 PSLQAVPRPQNWPXXXXXXXXXXXXXXXXIVSLRHXXXXXXXXXXXXXXXXXX--IAAHQ 88 P+ +PR ++WP IV+L + AA + Sbjct: 18 PAPLPIPRTRSWPAIVVAAIAAVVAVAALIVALTNARPAATPATTSVPTYTAAQTAAAQR 77 Query: 89 ALCETYKLAARSVQIETNGTN 109 LC+TYKL A +V ++TNG++ Sbjct: 78 QLCDTYKLVAHAVPVDTNGSD 98 >tr|A1KQN0|A1KQN0_MYCBP Tax_Id=410289 SubName: Full=Possible membrane protein;[Mycobacterium bovis] Length = 131 Score = 34.3 bits (77), Expect = 6.7 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 31 PSLQAVPRPQNWPXXXXXXXXXXXXXXXXIVSLRHXXXXXXXXXXXXXXXXXX--IAAHQ 88 P+ +PR ++WP IV+L + AA + Sbjct: 18 PAPWPIPRTRSWPAIVVAAIAAVVAVAALIVALTNARPAATPATTSVPTYTAAQTAAAQR 77 Query: 89 ALCETYKLAARSVQIETNGTN 109 LC+TYKL A +V ++TNG++ Sbjct: 78 QLCDTYKLVAHAVPVDTNGSD 98 >tr|Q7D4M6|Q7D4M6_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 149 Score = 34.3 bits (77), Expect = 6.7 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 31 PSLQAVPRPQNWPXXXXXXXXXXXXXXXXIVSLRHXXXXXXXXXXXXXXXXXX--IAAHQ 88 P+ +PR ++WP IV+L + AA + Sbjct: 18 PAPLPIPRTRSWPAIVVATIAAVVAVAALIVALTNARPAATPATTSVPTYTAAQTAAAQR 77 Query: 89 ALCETYKLAARSVQIETNGTN 109 LC+TYKL A +V ++TNG++ Sbjct: 78 QLCDTYKLVAHAVPVDTNGSD 98 >tr|A5WUC2|A5WUC2_MYCTF Tax_Id=336982 SubName: Full=Hypothetical membrane protein;[Mycobacterium tuberculosis] Length = 149 Score = 34.3 bits (77), Expect = 6.7 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 31 PSLQAVPRPQNWPXXXXXXXXXXXXXXXXIVSLRHXXXXXXXXXXXXXXXXXX--IAAHQ 88 P+ +PR ++WP IV+L + AA + Sbjct: 18 PAPLPIPRTRSWPAIVVAAIAAVVAVAALIVALTNARPAATPATTSVPTYTAAQTAAAQR 77 Query: 89 ALCETYKLAARSVQIETNGTN 109 LC+TYKL A +V ++TNG++ Sbjct: 78 QLCDTYKLVAHAVPVDTNGSD 98 >tr|A4KN12|A4KN12_MYCTU Tax_Id=395095 SubName: Full=Hypothetical membrane protein;[Mycobacterium tuberculosis str. Haarlem] Length = 149 Score = 34.3 bits (77), Expect = 6.7 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 31 PSLQAVPRPQNWPXXXXXXXXXXXXXXXXIVSLRHXXXXXXXXXXXXXXXXXX--IAAHQ 88 P+ +PR ++WP IV+L + AA + Sbjct: 18 PAPLPIPRTRSWPAIVVATIAAVVAVAALIVALTNARPAATPATTSVPTYTAAQTAAAQR 77 Query: 89 ALCETYKLAARSVQIETNGTN 109 LC+TYKL A +V ++TNG++ Sbjct: 78 QLCDTYKLVAHAVPVDTNGSD 98 >tr|A2VMS3|A2VMS3_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 117 Score = 33.9 bits (76), Expect = 8.8 Identities = 13/25 (52%), Positives = 20/25 (80%) Query: 85 AAHQALCETYKLAARSVQIETNGTN 109 AA + LC+TYKL A +V ++TNG++ Sbjct: 42 AAQRQLCDTYKLVAHAVPVDTNGSD 66 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.312 0.126 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 902,588,233 Number of extensions: 21770380 Number of successful extensions: 50696 Number of sequences better than 10.0: 17 Number of HSP's gapped: 50918 Number of HSP's successfully gapped: 17 Length of query: 187 Length of database: 3,846,993,858 Length adjustment: 129 Effective length of query: 58 Effective length of database: 2,392,492,671 Effective search space: 138764574918 Effective search space used: 138764574918 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 76 (33.9 bits)