BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_3076 (318 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HFU7|B2HFU7_MYCMM Tax_Id=216594 SubName: Full=5'-3' exonucl... 547 e-154 tr|A0PQS4|A0PQS4_MYCUA Tax_Id=362242 SubName: Full=5'-3' exonucl... 545 e-153 tr|C6DPX4|C6DPX4_MYCTK Tax_Id=478434 SubName: Full=5-3 exonuclea... 487 e-136 tr|C1AQ09|C1AQ09_MYCBT Tax_Id=561275 SubName: Full=5'-3' exonucl... 487 e-136 tr|A1KKD6|A1KKD6_MYCBP Tax_Id=410289 SubName: Full=5'-3' exonucl... 487 e-136 tr|A5WP67|A5WP67_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 487 e-136 tr|A4KIM7|A4KIM7_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 487 e-136 sp|Q10699|EX53_MYCTU Tax_Id=1773 RecName: Full=5'-3' exonuclease... 486 e-135 tr|A5U4B6|A5U4B6_MYCTA Tax_Id=419947 SubName: Full=Putative 5'-3... 485 e-135 tr|Q7VER0|Q7VER0_MYCBO Tax_Id=1765 SubName: Full=5'-3' exonuclea... 484 e-135 tr|A2VJJ1|A2VJJ1_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 483 e-134 tr|Q73YX8|Q73YX8_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 475 e-132 tr|A0QFC3|A0QFC3_MYCA1 Tax_Id=243243 SubName: Full=5'-3' exonucl... 473 e-131 tr|A0QZ36|A0QZ36_MYCS2 Tax_Id=246196 SubName: Full=5'-3' exonucl... 422 e-116 tr|A3PZH2|A3PZH2_MYCSJ Tax_Id=164757 SubName: Full=5'-3' exonucl... 414 e-114 tr|Q1B948|Q1B948_MYCSS Tax_Id=164756 SubName: Full=5'-3' exonucl... 413 e-113 tr|A1UFW2|A1UFW2_MYCSK Tax_Id=189918 SubName: Full=5'-3' exonucl... 413 e-113 tr|A4TB44|A4TB44_MYCGI Tax_Id=350054 SubName: Full=5'-3' exonucl... 409 e-112 tr|A1TAN3|A1TAN3_MYCVP Tax_Id=350058 SubName: Full=5'-3' exonucl... 402 e-110 tr|B1MAK1|B1MAK1_MYCA9 Tax_Id=561007 SubName: Full=Probable 5'-3... 395 e-108 tr|D0LDU0|D0LDU0_GORB4 Tax_Id=526226 SubName: Full=5'-3' exonucl... 353 2e-95 tr|C3JTA6|C3JTA6_RHOER Tax_Id=596309 SubName: Full=5-3 exonuclea... 333 1e-89 tr|C0ZZT7|C0ZZT7_RHOE4 Tax_Id=234621 SubName: Full=Probable 5'-3... 330 2e-88 tr|C1ARZ1|C1ARZ1_RHOOB Tax_Id=632772 SubName: Full=Putative 5'-3... 328 4e-88 tr|Q0SIH0|Q0SIH0_RHOSR Tax_Id=101510 SubName: Full=Probable DNA ... 323 2e-86 tr|C7MWU3|C7MWU3_SACVD Tax_Id=471857 SubName: Full=5'-3' exonucl... 316 2e-84 tr|Q5YUY4|Q5YUY4_NOCFA Tax_Id=37329 SubName: Full=Putative 5'-3'... 314 1e-83 tr|C2AQ99|C2AQ99_TSUPA Tax_Id=521096 SubName: Full=5'-3' exonucl... 307 9e-82 tr|A4FC00|A4FC00_SACEN Tax_Id=405948 SubName: Full=Potential 5'-... 296 2e-78 tr|C6WIF4|C6WIF4_ACTMD Tax_Id=446462 SubName: Full=5'-3' exonucl... 293 2e-77 tr|C8XAN2|C8XAN2_NAKMY Tax_Id=479431 SubName: Full=5'-3' exonucl... 259 3e-67 tr|A4X757|A4X757_SALTO Tax_Id=369723 SubName: Full=5'-3' exonucl... 257 1e-66 tr|B1W336|B1W336_STRGG Tax_Id=455632 SubName: Full=Putative 5'-3... 254 1e-65 tr|D1BRL4|D1BRL4_9MICO Tax_Id=446471 SubName: Full=5'-3' exonucl... 247 2e-63 tr|Q828F5|Q828F5_STRAW Tax_Id=33903 SubName: Full=Putative 5'-3'... 246 3e-63 tr|A8M2B7|A8M2B7_SALAI Tax_Id=391037 SubName: Full=5'-3' exonucl... 246 3e-63 sp|Q9RJ79|EX53_STRCO Tax_Id=1902 RecName: Full=5'-3' exonuclease... 246 3e-63 tr|C1RPN4|C1RPN4_9CELL Tax_Id=446466 SubName: Full=5'-3' exonucl... 245 4e-63 tr|C5C2Q9|C5C2Q9_BEUC1 Tax_Id=471853 SubName: Full=5'-3' exonucl... 244 1e-62 tr|C9Z4G1|C9Z4G1_STRSW Tax_Id=680198 SubName: Full=Putative 5'-3... 241 8e-62 tr|A1SK27|A1SK27_NOCSJ Tax_Id=196162 SubName: Full=5'-3' exonucl... 240 1e-61 tr|C7PVW9|C7PVW9_CATAD Tax_Id=479433 SubName: Full=5'-3' exonucl... 240 2e-61 tr|B5GEF4|B5GEF4_9ACTO Tax_Id=465543 SubName: Full=5'-3' exonucl... 239 2e-61 tr|B5I8L3|B5I8L3_9ACTO Tax_Id=463191 SubName: Full=5'-3' exonucl... 239 3e-61 tr|C9NE08|C9NE08_9ACTO Tax_Id=591167 SubName: Full=5'-3' exonucl... 238 5e-61 tr|B4VA87|B4VA87_9ACTO Tax_Id=465541 SubName: Full=5'-3' exonucl... 238 9e-61 tr|B5H159|B5H159_STRCL Tax_Id=443255 SubName: Full=5'-3' exonucl... 236 3e-60 tr|A6W984|A6W984_KINRD Tax_Id=266940 SubName: Full=5'-3' exonucl... 233 2e-59 tr|B5H8I6|B5H8I6_STRPR Tax_Id=457429 SubName: Full=5'-3' exonucl... 233 3e-59 tr|C4DFE9|C4DFE9_9ACTO Tax_Id=446470 SubName: Full=5'-3' exonucl... 232 4e-59 >tr|B2HFU7|B2HFU7_MYCMM Tax_Id=216594 SubName: Full=5'-3' exonuclease;[Mycobacterium marinum] Length = 318 Score = 547 bits (1409), Expect = e-154 Identities = 285/318 (89%), Positives = 285/318 (89%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD Sbjct: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELL Sbjct: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLDAFGIPAAGAA 120 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV Sbjct: 121 GFEADDVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 AERYGLP DPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP Sbjct: 181 AERYGLPAERAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY Sbjct: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 Query: 301 GVGSSIARLQKALDALPS 318 GVGSSIARLQKALDALPS Sbjct: 301 GVGSSIARLQKALDALPS 318 >tr|A0PQS4|A0PQS4_MYCUA Tax_Id=362242 SubName: Full=5'-3' exonuclease;[Mycobacterium ulcerans] Length = 318 Score = 545 bits (1404), Expect = e-153 Identities = 284/318 (89%), Positives = 284/318 (89%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD Sbjct: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELL Sbjct: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLDAFGIPAAGAA 120 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGL KATLFGPSEV Sbjct: 121 GFEADDVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLPKATLFGPSEV 180 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 AERYGLP DPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP Sbjct: 181 AERYGLPAERAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY Sbjct: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 Query: 301 GVGSSIARLQKALDALPS 318 GVGSSIARLQKALDALPS Sbjct: 301 GVGSSIARLQKALDALPS 318 >tr|C6DPX4|C6DPX4_MYCTK Tax_Id=478434 SubName: Full=5-3 exonuclease;[Mycobacterium tuberculosis] Length = 393 Score = 487 bits (1253), Expect = e-136 Identities = 251/315 (79%), Positives = 269/315 (85%) Query: 3 APLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLD 62 +PL+LLDGASMWFRS+FGVPSSITAPDGRP+NAVRGFIDSMAVVITQ RP+RLAVCLDLD Sbjct: 78 SPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCLDLD 137 Query: 63 WRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXX 122 WRPQFRVDLIPSYKAHRVAEPEP GQPDVEEVPDELTPQVDMIMELL Sbjct: 138 WRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAPGF 197 Query: 123 XXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAE 182 VLGTLA +E+RDPV+VVSGDRDLLQVVADDPVPVRVLYLGRGL+KATLFGP+EVAE Sbjct: 198 EADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEVAE 257 Query: 183 RYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKS 242 RYGLP DPSDGLPGVPGVGEKTAATLLA+HGSLD+I+AAA D K+ Sbjct: 258 RYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDRKT 317 Query: 243 TMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGV 302 TMAKG+RTKLLAASAYI AA VVRVATDAPVT +TPTD LPLVAADP+RTAELAT +GV Sbjct: 318 TMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELATRFGV 377 Query: 303 GSSIARLQKALDALP 317 SSIARLQKALD LP Sbjct: 378 ESSIARLQKALDTLP 392 >tr|C1AQ09|C1AQ09_MYCBT Tax_Id=561275 SubName: Full=5'-3' exonuclease;[Mycobacterium bovis] Length = 355 Score = 487 bits (1253), Expect = e-136 Identities = 251/315 (79%), Positives = 269/315 (85%) Query: 3 APLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLD 62 +PL+LLDGASMWFRS+FGVPSSITAPDGRP+NAVRGFIDSMAVVITQ RP+RLAVCLDLD Sbjct: 40 SPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCLDLD 99 Query: 63 WRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXX 122 WRPQFRVDLIPSYKAHRVAEPEP GQPDVEEVPDELTPQVDMIMELL Sbjct: 100 WRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAPGF 159 Query: 123 XXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAE 182 VLGTLA +E+RDPV+VVSGDRDLLQVVADDPVPVRVLYLGRGL+KATLFGP+EVAE Sbjct: 160 EADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEVAE 219 Query: 183 RYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKS 242 RYGLP DPSDGLPGVPGVGEKTAATLLA+HGSLD+I+AAA D K+ Sbjct: 220 RYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDRKT 279 Query: 243 TMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGV 302 TMAKG+RTKLLAASAYI AA VVRVATDAPVT +TPTD LPLVAADP+RTAELAT +GV Sbjct: 280 TMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELATRFGV 339 Query: 303 GSSIARLQKALDALP 317 SSIARLQKALD LP Sbjct: 340 ESSIARLQKALDTLP 354 >tr|A1KKD6|A1KKD6_MYCBP Tax_Id=410289 SubName: Full=5'-3' exonuclease; EC=3.1.11.-;[Mycobacterium bovis] Length = 355 Score = 487 bits (1253), Expect = e-136 Identities = 251/315 (79%), Positives = 269/315 (85%) Query: 3 APLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLD 62 +PL+LLDGASMWFRS+FGVPSSITAPDGRP+NAVRGFIDSMAVVITQ RP+RLAVCLDLD Sbjct: 40 SPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCLDLD 99 Query: 63 WRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXX 122 WRPQFRVDLIPSYKAHRVAEPEP GQPDVEEVPDELTPQVDMIMELL Sbjct: 100 WRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAPGF 159 Query: 123 XXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAE 182 VLGTLA +E+RDPV+VVSGDRDLLQVVADDPVPVRVLYLGRGL+KATLFGP+EVAE Sbjct: 160 EADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEVAE 219 Query: 183 RYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKS 242 RYGLP DPSDGLPGVPGVGEKTAATLLA+HGSLD+I+AAA D K+ Sbjct: 220 RYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDRKT 279 Query: 243 TMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGV 302 TMAKG+RTKLLAASAYI AA VVRVATDAPVT +TPTD LPLVAADP+RTAELAT +GV Sbjct: 280 TMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELATRFGV 339 Query: 303 GSSIARLQKALDALP 317 SSIARLQKALD LP Sbjct: 340 ESSIARLQKALDTLP 354 >tr|A5WP67|A5WP67_MYCTF Tax_Id=336982 SubName: Full=Hypothetical 5'-3' exonuclease;[Mycobacterium tuberculosis] Length = 393 Score = 487 bits (1253), Expect = e-136 Identities = 251/315 (79%), Positives = 269/315 (85%) Query: 3 APLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLD 62 +PL+LLDGASMWFRS+FGVPSSITAPDGRP+NAVRGFIDSMAVVITQ RP+RLAVCLDLD Sbjct: 78 SPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCLDLD 137 Query: 63 WRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXX 122 WRPQFRVDLIPSYKAHRVAEPEP GQPDVEEVPDELTPQVDMIMELL Sbjct: 138 WRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAPGF 197 Query: 123 XXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAE 182 VLGTLA +E+RDPV+VVSGDRDLLQVVADDPVPVRVLYLGRGL+KATLFGP+EVAE Sbjct: 198 EADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEVAE 257 Query: 183 RYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKS 242 RYGLP DPSDGLPGVPGVGEKTAATLLA+HGSLD+I+AAA D K+ Sbjct: 258 RYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDRKT 317 Query: 243 TMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGV 302 TMAKG+RTKLLAASAYI AA VVRVATDAPVT +TPTD LPLVAADP+RTAELAT +GV Sbjct: 318 TMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELATRFGV 377 Query: 303 GSSIARLQKALDALP 317 SSIARLQKALD LP Sbjct: 378 ESSIARLQKALDTLP 392 >tr|A4KIM7|A4KIM7_MYCTU Tax_Id=395095 SubName: Full=Hypothetical 5-3 exonuclease;[Mycobacterium tuberculosis str. Haarlem] Length = 337 Score = 487 bits (1253), Expect = e-136 Identities = 251/315 (79%), Positives = 269/315 (85%) Query: 3 APLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLD 62 +PL+LLDGASMWFRS+FGVPSSITAPDGRP+NAVRGFIDSMAVVITQ RP+RLAVCLDLD Sbjct: 22 SPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCLDLD 81 Query: 63 WRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXX 122 WRPQFRVDLIPSYKAHRVAEPEP GQPDVEEVPDELTPQVDMIMELL Sbjct: 82 WRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAPGF 141 Query: 123 XXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAE 182 VLGTLA +E+RDPV+VVSGDRDLLQVVADDPVPVRVLYLGRGL+KATLFGP+EVAE Sbjct: 142 EADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEVAE 201 Query: 183 RYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKS 242 RYGLP DPSDGLPGVPGVGEKTAATLLA+HGSLD+I+AAA D K+ Sbjct: 202 RYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDRKT 261 Query: 243 TMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGV 302 TMAKG+RTKLLAASAYI AA VVRVATDAPVT +TPTD LPLVAADP+RTAELAT +GV Sbjct: 262 TMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELATRFGV 321 Query: 303 GSSIARLQKALDALP 317 SSIARLQKALD LP Sbjct: 322 ESSIARLQKALDTLP 336 >sp|Q10699|EX53_MYCTU Tax_Id=1773 RecName: Full=5'-3' exonuclease; EC=3.1.11.-;[Mycobacterium tuberculosis] Length = 318 Score = 486 bits (1252), Expect = e-135 Identities = 251/317 (79%), Positives = 269/317 (84%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M +PL+LLDGASMWFRS+FGVPSSITAPDGRP+NAVRGFIDSMAVVITQ RP+RLAVCLD Sbjct: 1 MRSPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCLD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 LDWRPQFRVDLIPSYKAHRVAEPEP GQPDVEEVPDELTPQVDMIMELL Sbjct: 61 LDWRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAP 120 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLA +E+RDPV+VVSGDRDLLQVVADDPVPVRVLYLGRGL+KATLFGP+EV Sbjct: 121 GFEADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEV 180 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 AERYGLP DPSDGLPGVPGVGEKTAATLLA+HGSLD+I+AAA D Sbjct: 181 AERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDR 240 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 K+TMAKG+RTKLLAASAYI AA VVRVATDAPVT +TPTD PLVAADP+RTAELAT + Sbjct: 241 KTTMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRFPLVAADPERTAELATRF 300 Query: 301 GVGSSIARLQKALDALP 317 GV SSIARLQKALD LP Sbjct: 301 GVESSIARLQKALDTLP 317 >tr|A5U4B6|A5U4B6_MYCTA Tax_Id=419947 SubName: Full=Putative 5'-3' exonuclease;[Mycobacterium tuberculosis] Length = 393 Score = 485 bits (1249), Expect = e-135 Identities = 250/315 (79%), Positives = 268/315 (85%) Query: 3 APLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLD 62 +PL+LLDGASMWFRS+FGVPSSITAPDGRP+NAVRGFIDSMAVVITQ RP+RLAVCLDLD Sbjct: 78 SPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCLDLD 137 Query: 63 WRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXX 122 WRPQFRVDLIPSYKAHRVAEPEP GQPDVEEVPDELTPQVDMIMELL Sbjct: 138 WRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAPGF 197 Query: 123 XXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAE 182 VLGTLA +E+RDPV+VVSGDRDLLQVVADDPVPVRVLYLGRGL+KATLFGP+EVAE Sbjct: 198 EADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEVAE 257 Query: 183 RYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKS 242 RYGLP DPSDGLPGVPGVGEKTAATLLA+HGSLD+I+AAA D K+ Sbjct: 258 RYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDRKT 317 Query: 243 TMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGV 302 TMAKG+RTKLLAASAYI AA VVRVATDAPVT +TPTD PLVAADP+RTAELAT +GV Sbjct: 318 TMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRFPLVAADPERTAELATRFGV 377 Query: 303 GSSIARLQKALDALP 317 SSIARLQKALD LP Sbjct: 378 ESSIARLQKALDTLP 392 >tr|Q7VER0|Q7VER0_MYCBO Tax_Id=1765 SubName: Full=5'-3' exonuclease; EC=3.1.11.-;[Mycobacterium bovis] Length = 374 Score = 484 bits (1247), Expect = e-135 Identities = 250/315 (79%), Positives = 268/315 (85%) Query: 3 APLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLD 62 +PL+LLDGASMWFRS+FGVPSSITAPDGRP+NAVRGFIDSMAVVI Q RP+RLAVCLDLD Sbjct: 59 SPLVLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVIIQQRPNRLAVCLDLD 118 Query: 63 WRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXX 122 WRPQFRVDLIPSYKAHRVAEPEP GQPDVEEVPDELTPQVDMIMELL Sbjct: 119 WRPQFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAPGF 178 Query: 123 XXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAE 182 VLGTLA +E+RDPV+VVSGDRDLLQVVADDPVPVRVLYLGRGL+KATLFGP+EVAE Sbjct: 179 EADDVLGTLATRERRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEVAE 238 Query: 183 RYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKS 242 RYGLP DPSDGLPGVPGVGEKTAATLLA+HGSLD+I+AAA D K+ Sbjct: 239 RYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDRKT 298 Query: 243 TMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGV 302 TMAKG+RTKLLAASAYI AA VVRVATDAPVT +TPTD LPLVAADP+RTAELAT +GV Sbjct: 299 TMAKGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELATRFGV 358 Query: 303 GSSIARLQKALDALP 317 SSIARLQKALD LP Sbjct: 359 ESSIARLQKALDTLP 373 >tr|A2VJJ1|A2VJJ1_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 313 Score = 483 bits (1242), Expect = e-134 Identities = 249/312 (79%), Positives = 266/312 (85%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +LLDGASMWFRS+FGVPSSITAPDGRP+NAVRGFIDSMAVVITQ RP+RLAVCLDLDWRP Sbjct: 1 MLLDGASMWFRSFFGVPSSITAPDGRPVNAVRGFIDSMAVVITQQRPNRLAVCLDLDWRP 60 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 QFRVDLIPSYKAHRVAEPEP GQPDVEEVPDELTPQVDMIMELL Sbjct: 61 QFRVDLIPSYKAHRVAEPEPNGQPDVEEVPDELTPQVDMIMELLDAFGIAMAGAPGFEAD 120 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 VLGTLA +E+RDPV+VVSGDRDLLQVVADDPVPVRVLYLGRGL+KATLFGP+EVAERYG Sbjct: 121 DVLGTLATRERRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEVAERYG 180 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 LP DPSDGLPGVPGVGEKTAATLLA+HGSLD+I+AAA D K+TMA Sbjct: 181 LPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAADDRKTTMA 240 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGSS 305 KG+RTKLLAASAYI AA VVRVATDAPVT +TPTD LPLVAADP+RTAELAT +GV SS Sbjct: 241 KGLRTKLLAASAYIKAADRVVRVATDAPVTLSTPTDRLPLVAADPERTAELATRFGVESS 300 Query: 306 IARLQKALDALP 317 IARLQKALD LP Sbjct: 301 IARLQKALDTLP 312 >tr|Q73YX8|Q73YX8_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 318 Score = 475 bits (1223), Expect = e-132 Identities = 243/317 (76%), Positives = 264/317 (83%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M PL+LLDGASMWFRSYFGVPSSITAPDGRP+NAVRGF+DS+AVVITQ RPSRL VCLD Sbjct: 1 MRLPLVLLDGASMWFRSYFGVPSSITAPDGRPVNAVRGFLDSLAVVITQQRPSRLVVCLD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 LDWRPQFRVDL+PSYKAHRV E EPAG+PDVEEVPD+LTPQ+DMI ELL Sbjct: 61 LDWRPQFRVDLVPSYKAHRVPEAEPAGEPDVEEVPDDLTPQIDMIAELLEAYGIPTAGAE 120 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLAA+E+ DPVVVVSGDRDLLQVV+DDPVPVRVLYLGRGLSKATLFGP EV Sbjct: 121 GFEADDVLGTLAARERDDPVVVVSGDRDLLQVVSDDPVPVRVLYLGRGLSKATLFGPVEV 180 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 AE YG+P DPSDGLPGVPGVGEKTAATLLAQHGSL+R++AAAHDP Sbjct: 181 AEHYGVPVDRAGPAYAELALLRGDPSDGLPGVPGVGEKTAATLLAQHGSLERVLAAAHDP 240 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 KS MAKG+R KLL A YI+AA +VVRVATDAPV +TP+DA+PLVAADP RTAELATE Sbjct: 241 KSKMAKGLRAKLLGALDYIEAAGAVVRVATDAPVKLSTPSDAVPLVAADPHRTAELATEL 300 Query: 301 GVGSSIARLQKALDALP 317 GVGSSIARLQKALDALP Sbjct: 301 GVGSSIARLQKALDALP 317 >tr|A0QFC3|A0QFC3_MYCA1 Tax_Id=243243 SubName: Full=5'-3' exonuclease;[Mycobacterium avium] Length = 313 Score = 473 bits (1216), Expect = e-131 Identities = 242/312 (77%), Positives = 261/312 (83%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +LLDGASMWFRSYFGVPSSITAPDGRP+NAVRGF+DS+AVVITQ RPSRL VCLDLDWRP Sbjct: 1 MLLDGASMWFRSYFGVPSSITAPDGRPVNAVRGFLDSLAVVITQQRPSRLVVCLDLDWRP 60 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 QFRVDL+PSYKAHRVAE EPAG+PDVEEVPD+LTPQ+DMI ELL Sbjct: 61 QFRVDLVPSYKAHRVAEAEPAGEPDVEEVPDDLTPQIDMIAELLEAYGIPTAGAEGFEAD 120 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 VLGTLAA+E+ DPVVVVSGDRDLLQVV+DDPVPVRVLYLGRGLSKATLFGP EVAE YG Sbjct: 121 DVLGTLAARERDDPVVVVSGDRDLLQVVSDDPVPVRVLYLGRGLSKATLFGPVEVAEHYG 180 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 +P DPSDGLPGVPGVGEKTAATLLAQHGSL R++AAAHDPKS MA Sbjct: 181 VPVDRAGPAYAELALLRGDPSDGLPGVPGVGEKTAATLLAQHGSLHRVLAAAHDPKSKMA 240 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGSS 305 KG+R KLL A YI+AA VVRVATDAPV +TP+DA+PLVAADPQRTAELATE GVGSS Sbjct: 241 KGLRAKLLGALDYIEAAGPVVRVATDAPVKLSTPSDAVPLVAADPQRTAELATELGVGSS 300 Query: 306 IARLQKALDALP 317 IARLQKALDALP Sbjct: 301 IARLQKALDALP 312 >tr|A0QZ36|A0QZ36_MYCS2 Tax_Id=246196 SubName: Full=5'-3' exonuclease;[Mycobacterium smegmatis] Length = 338 Score = 422 bits (1084), Expect = e-116 Identities = 215/318 (67%), Positives = 249/318 (78%), Gaps = 1/318 (0%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 + AP+LLLDGASMWFRSYFGVPSSI APDGRP+NAVRGFID+++ ++T+ +P RL VC D Sbjct: 20 LTAPILLLDGASMWFRSYFGVPSSIKAPDGRPVNAVRGFIDAISTLVTREKPRRLVVCRD 79 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 DWRPQ+RVDLIPSYKAHRVAEPEP G PD+EEVPD+LTPQV+MI+ELL Sbjct: 80 DDWRPQWRVDLIPSYKAHRVAEPEPDGVPDIEEVPDDLTPQVNMILELLDAFGIPTAGAA 139 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVP-VRVLYLGRGLSKATLFGPSE 179 VLGTL+A+E+RDPVVVVSGDRDLLQ+V D+P P VRVLYLGRGL+KAT +GP+E Sbjct: 140 GFEADDVLGTLSAREERDPVVVVSGDRDLLQLVRDEPAPQVRVLYLGRGLAKATKWGPAE 199 Query: 180 VAERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHD 239 VAE+YG+P DPSDGLPGV G+GEKTAA+LLA+HGSL I+ AAHD Sbjct: 200 VAEQYGVPLDRAGTAYAELALLRGDPSDGLPGVAGIGEKTAASLLAKHGSLQNILDAAHD 259 Query: 240 PKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATE 299 PKS ++K RTKLL A YI AA +VVRVATDAPVTF+TPTD LPL A DP R AELA Sbjct: 260 PKSGLSKAHRTKLLGAVDYIAAAETVVRVATDAPVTFSTPTDTLPLAAGDPARVAELAAA 319 Query: 300 YGVGSSIARLQKALDALP 317 YGV SSI+RLQ ALD LP Sbjct: 320 YGVSSSISRLQTALDQLP 337 >tr|A3PZH2|A3PZH2_MYCSJ Tax_Id=164757 SubName: Full=5'-3' exonuclease;[Mycobacterium sp.] Length = 316 Score = 414 bits (1065), Expect = e-114 Identities = 216/316 (68%), Positives = 248/316 (78%), Gaps = 1/316 (0%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M APLLLLDGASMWFRSYF +PSSITAPDGRP+NAVRGF+D++A++I + RPSRL VC D Sbjct: 1 MSAPLLLLDGASMWFRSYFALPSSITAPDGRPVNAVRGFLDTVAMLIGRERPSRLVVCRD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 DWRPQ+RVDL+PSYKAHRVAEP+ AG DVE VPDELTPQVDMIME+L Sbjct: 61 DDWRPQWRVDLVPSYKAHRVAEPQAAGT-DVEVVPDELTPQVDMIMEMLDAFGIPHAGAP 119 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLAA E+RD V+VVSGDRD+LQVV DDPV VRVLYLGRG+SKATLFGP+EV Sbjct: 120 GYEADDVLGTLAAAEERDRVIVVSGDRDMLQVVRDDPVEVRVLYLGRGMSKATLFGPAEV 179 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 A++Y +P DPSDGLPGVPGVGEKTAATLLAQ GSL+ IVAAA+DP Sbjct: 180 ADQYAVPKERAGAAYAELALMRGDPSDGLPGVPGVGEKTAATLLAQFGSLEAIVAAANDP 239 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 KS M+K R K+LAA+ YI+AA VVRVATDAPVT +T TD LPL AA P++ A+LA + Sbjct: 240 KSKMSKAYRKKMLAAADYIEAAEPVVRVATDAPVTMSTKTDELPLAAAHPRKVAQLAGDL 299 Query: 301 GVGSSIARLQKALDAL 316 GV SS+ RLQKALDAL Sbjct: 300 GVTSSVGRLQKALDAL 315 >tr|Q1B948|Q1B948_MYCSS Tax_Id=164756 SubName: Full=5'-3' exonuclease;[Mycobacterium sp.] Length = 316 Score = 413 bits (1061), Expect = e-113 Identities = 215/316 (68%), Positives = 247/316 (78%), Gaps = 1/316 (0%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M APLLLLDGASMWFRSYF +PSSITAPDGRP+NAVRGF+D++A++I + RPSRL VC D Sbjct: 1 MSAPLLLLDGASMWFRSYFALPSSITAPDGRPVNAVRGFLDTVAMLIGRERPSRLVVCRD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 DWRPQ+RVDL+PSYKAHRVAEP+ AG DVE VPDELTPQVDMIME+L Sbjct: 61 DDWRPQWRVDLVPSYKAHRVAEPQAAGT-DVEVVPDELTPQVDMIMEMLDAFGIPHAGAP 119 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLA E+RD V+VVSGDRD+LQVV DDPV VRVLYLGRG+SKATLFGP+EV Sbjct: 120 GYEADDVLGTLAVAEERDRVIVVSGDRDMLQVVRDDPVEVRVLYLGRGMSKATLFGPAEV 179 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 A++Y +P DPSDGLPGVPGVGEKTAATLLAQ GSL+ IVAAA+DP Sbjct: 180 ADQYAVPKERAGAAYAELALMRGDPSDGLPGVPGVGEKTAATLLAQFGSLEAIVAAANDP 239 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 KS M+K R K+LAA+ YI+AA VVRVATDAPVT +T TD LPL AA P++ A+LA + Sbjct: 240 KSKMSKAYRKKMLAAADYIEAAEPVVRVATDAPVTMSTKTDELPLAAAHPRKVAQLAGDL 299 Query: 301 GVGSSIARLQKALDAL 316 GV SS+ RLQKALDAL Sbjct: 300 GVTSSVGRLQKALDAL 315 >tr|A1UFW2|A1UFW2_MYCSK Tax_Id=189918 SubName: Full=5'-3' exonuclease;[Mycobacterium sp.] Length = 316 Score = 413 bits (1061), Expect = e-113 Identities = 215/316 (68%), Positives = 247/316 (78%), Gaps = 1/316 (0%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M APLLLLDGASMWFRSYF +PSSITAPDGRP+NAVRGF+D++A++I + RPSRL VC D Sbjct: 1 MSAPLLLLDGASMWFRSYFALPSSITAPDGRPVNAVRGFLDTVAMLIGRERPSRLVVCRD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 DWRPQ+RVDL+PSYKAHRVAEP+ AG DVE VPDELTPQVDMIME+L Sbjct: 61 DDWRPQWRVDLVPSYKAHRVAEPQAAGT-DVEVVPDELTPQVDMIMEMLDAFGIPHAGAP 119 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLA E+RD V+VVSGDRD+LQVV DDPV VRVLYLGRG+SKATLFGP+EV Sbjct: 120 GYEADDVLGTLAVAEERDRVIVVSGDRDMLQVVRDDPVEVRVLYLGRGMSKATLFGPAEV 179 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 A++Y +P DPSDGLPGVPGVGEKTAATLLAQ GSL+ IVAAA+DP Sbjct: 180 ADQYAVPKERAGAAYAELALMRGDPSDGLPGVPGVGEKTAATLLAQFGSLEAIVAAANDP 239 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 KS M+K R K+LAA+ YI+AA VVRVATDAPVT +T TD LPL AA P++ A+LA + Sbjct: 240 KSKMSKAYRKKMLAAADYIEAAEPVVRVATDAPVTMSTKTDELPLAAAHPRKVAQLAGDL 299 Query: 301 GVGSSIARLQKALDAL 316 GV SS+ RLQKALDAL Sbjct: 300 GVTSSVGRLQKALDAL 315 >tr|A4TB44|A4TB44_MYCGI Tax_Id=350054 SubName: Full=5'-3' exonuclease;[Mycobacterium gilvum] Length = 321 Score = 409 bits (1051), Expect = e-112 Identities = 210/314 (66%), Positives = 240/314 (76%) Query: 3 APLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLD 62 +PL+LLDGASMWFRSYFGVPSSITAPDGRP+NA+RGF+D+++ VI + RP RL VC D D Sbjct: 8 SPLVLLDGASMWFRSYFGVPSSITAPDGRPVNALRGFLDAVSTVIARERPHRLVVCRDDD 67 Query: 63 WRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXX 122 WRPQ+RVDLIPSYKAHRV E PA PDVEEVPDELTPQVDMIME+L Sbjct: 68 WRPQWRVDLIPSYKAHRVLEENPADGPDVEEVPDELTPQVDMIMEILDAFGIATAGAAHY 127 Query: 123 XXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAE 182 VLGTLAA E+RDPVVVVSGDRDLLQ+V D+PVPVRVLYLG+GL+KA +GP+EVA+ Sbjct: 128 EADDVLGTLAAAEERDPVVVVSGDRDLLQLVRDEPVPVRVLYLGKGLAKAVKWGPAEVAD 187 Query: 183 RYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKS 242 YG+P DPSDGLPGVPG+GEKTAATLLAQH SL+ IVAAAHDP S Sbjct: 188 TYGVPLERAGSAYVELALLRGDPSDGLPGVPGIGEKTAATLLAQHNSLENIVAAAHDPAS 247 Query: 243 TMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGV 302 T++K R KLLAAS YI+ A VVRVATDA + ++T DALPL A DP++ ELA YGV Sbjct: 248 TLSKAHRKKLLAASDYIEKAEPVVRVATDAELDWSTDGDALPLSARDPRKVVELAERYGV 307 Query: 303 GSSIARLQKALDAL 316 SSI RLQ ALD L Sbjct: 308 SSSIGRLQAALDKL 321 >tr|A1TAN3|A1TAN3_MYCVP Tax_Id=350058 SubName: Full=5'-3' exonuclease;[Mycobacterium vanbaalenii] Length = 323 Score = 402 bits (1034), Expect = e-110 Identities = 210/318 (66%), Positives = 238/318 (74%), Gaps = 4/318 (1%) Query: 4 PLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDW 63 PL+LLDGASMWFRSYFGVPSSITAPDGRP+NA+RGF+D++A VIT+ RP RL VC D DW Sbjct: 5 PLVLLDGASMWFRSYFGVPSSITAPDGRPVNALRGFLDAVATVITRERPHRLVVCRDDDW 64 Query: 64 RPQFRVDLIPSYKAHRVAEPEPAGQP----DVEEVPDELTPQVDMIMELLXXXXXXXXXX 119 RPQ+RVDLIPSYKAHRVA P P DVEEVPD+LTPQVDMIME+L Sbjct: 65 RPQWRVDLIPSYKAHRVAVPAEEANPPTDVDVEEVPDDLTPQVDMIMEMLDAFGIATAGA 124 Query: 120 XXXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSE 179 VLGTLA +E RDPVVVVSGDRDLLQ+V D+PVPVRVLYLGRGL++AT +GP E Sbjct: 125 QQCEADDVLGTLAGRETRDPVVVVSGDRDLLQLVRDEPVPVRVLYLGRGLARATTYGPVE 184 Query: 180 VAERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHD 239 V+E Y +P DPSDGLPGVPG+GEKTAATLLAQHGSL+ I+AAA D Sbjct: 185 VSETYNVPVDRAGPAYAELALLRGDPSDGLPGVPGIGEKTAATLLAQHGSLEAILAAAQD 244 Query: 240 PKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATE 299 PKS +++ RTKLLAAS YI A VVRVATDA V F+T DALPL A P++ AELA Sbjct: 245 PKSKLSRAHRTKLLAASDYIAKAGPVVRVATDADVNFSTDDDALPLAARHPRKVAELAER 304 Query: 300 YGVGSSIARLQKALDALP 317 YGV SS+ RLQ ALD LP Sbjct: 305 YGVSSSLGRLQTALDKLP 322 >tr|B1MAK1|B1MAK1_MYCA9 Tax_Id=561007 SubName: Full=Probable 5'-3' exonuclease;[Mycobacterium abscessus] Length = 337 Score = 395 bits (1015), Expect = e-108 Identities = 206/324 (63%), Positives = 239/324 (73%), Gaps = 10/324 (3%) Query: 4 PLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDW 63 P+LLLDGAS+WFRSYFGVP SIT+PDGRP+NAVRGF+D+++ +IT +RP RLAVCLDLDW Sbjct: 13 PVLLLDGASLWFRSYFGVPDSITSPDGRPVNAVRGFLDTVSQLITLYRPHRLAVCLDLDW 72 Query: 64 RPQFRVDLIPSYKAHRVAEPEP-AGQP---------DVEEVPDELTPQVDMIMELLXXXX 113 RP +RV IPSYKAHRV +P AG+P D+EEVPDELTPQVDMI ++L Sbjct: 73 RPAWRVAAIPSYKAHRVVTDDPLAGRPSDTVGAQTVDIEEVPDELTPQVDMIADILDAFG 132 Query: 114 XXXXXXXXXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKAT 173 VLGTLAA E+RDPV+VVSGDRDLLQVVAD PVPVRV Y+GRG +KAT Sbjct: 133 IASAGAAGFEADDVLGTLAANERRDPVIVVSGDRDLLQVVADVPVPVRVFYMGRGFAKAT 192 Query: 174 LFGPSEVAERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRI 233 LFGP+EVAE+YG+P DPSDGLPGVPGVGEKTAA LLA+ GSLD I Sbjct: 193 LFGPTEVAEQYGVPLARAGAAYAELALLRGDPSDGLPGVPGVGEKTAAKLLAEFGSLDGI 252 Query: 234 VAAAHDPKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRT 293 + AA DPKS +AK VR KL AA+ Y+ AA VVRVA DAPV +DALPL A DP+R Sbjct: 253 LTAADDPKSGLAKAVRAKLQAATVYMAAAEPVVRVAVDAPVIVDRDSDALPLTARDPRRV 312 Query: 294 AELATEYGVGSSIARLQKALDALP 317 AEL E G+GS++ RLQKALD LP Sbjct: 313 AELGAELGIGSAVTRLQKALDGLP 336 >tr|D0LDU0|D0LDU0_GORB4 Tax_Id=526226 SubName: Full=5'-3' exonuclease, N-terminal resolvase-like domain protein;[Gordonia bronchialis] Length = 347 Score = 353 bits (905), Expect = 2e-95 Identities = 185/320 (57%), Positives = 224/320 (70%), Gaps = 11/320 (3%) Query: 5 LLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWR 64 L+LLDGAS+WFRS++ +P +TAPDGRP+NAVRGF+D++A ++T+ RP+RL VCLDLDWR Sbjct: 21 LMLLDGASLWFRSFYALPEKMTAPDGRPVNAVRGFLDTIANLVTRERPTRLVVCLDLDWR 80 Query: 65 PQFRVDLIPSYKAHRVAEPEPAG----QPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 P FR DLIPSYKAHRVA P +G + DVEEVPD LTPQVDMIM +L Sbjct: 81 PSFRTDLIPSYKAHRVATPAASGTGDSEIDVEEVPDTLTPQVDMIMRVLECAGIARSGAV 140 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 V+GTLA +E +DPVVVVSGDRDLLQVVADDPVPVRVLY+GRGL+KA + GP EV Sbjct: 141 GCEADDVIGTLAYEEAQDPVVVVSGDRDLLQVVADDPVPVRVLYVGRGLAKAEMMGPDEV 200 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 A RYG+P DPSDGLPGVPGVGEKTAATL+++ GSLD + AAA DP Sbjct: 201 AARYGVPADRAGMAYAEMSMLRGDPSDGLPGVPGVGEKTAATLISEFGSLDNLEAAAADP 260 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFT-------TPTDALPLVAADPQRT 293 S++ R +LA++ Y+DAAR+VV V TDA + TD LP ADP Sbjct: 261 SSSVPTRARKAILASADYLDAARTVVLVRTDADTIDSWTADEDAAGTDRLPAQPADPDGL 320 Query: 294 AELATEYGVGSSIARLQKAL 313 A L E G+G+S+ARL KAL Sbjct: 321 ARLIEELGIGTSVARLAKAL 340 >tr|C3JTA6|C3JTA6_RHOER Tax_Id=596309 SubName: Full=5-3 exonuclease;[Rhodococcus erythropolis SK121] Length = 321 Score = 333 bits (855), Expect = 1e-89 Identities = 181/317 (57%), Positives = 214/317 (67%), Gaps = 6/317 (1%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M PLLLLDGAS+WFR+++ +P S PDGRP+NAVRGF D +A +IT+H+PSRLAVCLD Sbjct: 1 MSGPLLLLDGASLWFRAFYALPESFVDPDGRPVNAVRGFTDMVASLITKHQPSRLAVCLD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 LDWRPQFRVD +P+YKAHRV E EEVPD LTPQVDMIM++L Sbjct: 61 LDWRPQFRVDAVPTYKAHRVEEGSDGAS---EEVPDTLTPQVDMIMDVLAAAGIATAGAV 117 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLAA E+ D VVVSGDRDLLQVV D+ VPVRVLY+GRGLSKA LFGP EV Sbjct: 118 GLEADDVLGTLAATEREDLTVVVSGDRDLLQVVTDEYVPVRVLYVGRGLSKAELFGPVEV 177 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 AE+YG+P D SDGLPG+ GVGEKTA+TL+ ++GSL + AAA DP Sbjct: 178 AEKYGVPGDRAGEAYAELAVLRGDASDGLPGIKGVGEKTASTLMLRYGSLAGLRAAAADP 237 Query: 241 KSTMAKGVRTKLLA--ASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELAT 298 +S MAKG+R KL + A AY+DAA VVRV DA V F + D LP DP R E+A Sbjct: 238 ESDMAKGIRAKLTSPEAMAYLDAALPVVRVVRDADVQF-SKDDRLPATPVDPARLEEVAA 296 Query: 299 EYGVGSSIARLQKALDA 315 + S RL AL+A Sbjct: 297 SLNIERSAGRLAAALEA 313 >tr|C0ZZT7|C0ZZT7_RHOE4 Tax_Id=234621 SubName: Full=Probable 5'-3' exonuclease; EC=3.1.11.-;[Rhodococcus erythropolis] Length = 321 Score = 330 bits (845), Expect = 2e-88 Identities = 180/317 (56%), Positives = 214/317 (67%), Gaps = 6/317 (1%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M PLLLLDGAS+WFR+++ +P S PDGRP+NAVRGF D +A +IT+H+PSRLAVCLD Sbjct: 1 MSGPLLLLDGASLWFRAFYALPESFVDPDGRPVNAVRGFTDMVASLITKHQPSRLAVCLD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 LDWRPQFRVD +P+YKAHRV E EEVPD LTPQVDMIM++L Sbjct: 61 LDWRPQFRVDAVPTYKAHRVEEGSDGSS---EEVPDTLTPQVDMIMDVLAAAGIATAGAV 117 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLAA E+ D VVVSGDRDLLQVV D+ VPVRVLY+GRGLS+A LFGP EV Sbjct: 118 GLEADDVLGTLAATEREDLTVVVSGDRDLLQVVTDEYVPVRVLYVGRGLSRAELFGPVEV 177 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 AE+YG+P D SDGLPG+ GVGEKTA+TL+ ++GSL + AAA DP Sbjct: 178 AEKYGVPGDRAGEAYAELAVLRGDASDGLPGIKGVGEKTASTLMLRYGSLAGLRAAAADP 237 Query: 241 KSTMAKGVRTKLLA--ASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELAT 298 +S MAKG+R KL + A A++DAA VVRV DA V F + D LP ADP R E+A Sbjct: 238 ESDMAKGIRAKLTSPEAIAHLDAALPVVRVVRDADVQF-SKDDQLPATPADPARFEEVAA 296 Query: 299 EYGVGSSIARLQKALDA 315 + S RL AL A Sbjct: 297 SLNIERSAGRLAAALAA 313 >tr|C1ARZ1|C1ARZ1_RHOOB Tax_Id=632772 SubName: Full=Putative 5'-3' exonuclease; EC=3.1.11.-;[Rhodococcus opacus] Length = 321 Score = 328 bits (842), Expect = 4e-88 Identities = 174/313 (55%), Positives = 212/313 (67%), Gaps = 4/313 (1%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M PLLLLDGAS+WFR+Y+ +P SIT+PDGR +NAVRGF D +A +IT+H+PSRLAVCLD Sbjct: 4 MTGPLLLLDGASLWFRAYYALPDSITSPDGRSVNAVRGFTDMVAALITKHQPSRLAVCLD 63 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 LDWRP FRV+ +P+YKAHRVAE + EEVPD L+PQV MI+++L Sbjct: 64 LDWRPAFRVEAVPTYKAHRVAEDTGGAE---EEVPDTLSPQVPMILDVLAATGIATAGAE 120 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLAA E RD V+VV+GDRDLLQVV DDPVPVRVLY+ RGL+KA L GP EV Sbjct: 121 GLEADDVLGTLAATETRDAVIVVTGDRDLLQVVTDDPVPVRVLYVVRGLAKAELLGPEEV 180 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 A +YG+P D SDGLPGV G+GEKTA++L+ Q+GSL + AAA DP Sbjct: 181 AAKYGVPADRAGEAYAELALLRGDSSDGLPGVKGIGEKTASSLIMQYGSLAALRAAAVDP 240 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 +S MAKG R K AA+ Y+DAA VVRV DA V + D LP D R LA E Sbjct: 241 ESDMAKGARAKFAAAADYLDAALPVVRVVRDAEVELSR-EDTLPAKPVDADRLGRLADEL 299 Query: 301 GVGSSIARLQKAL 313 G+ +S+ RL A+ Sbjct: 300 GIENSVGRLTAAM 312 >tr|Q0SIH0|Q0SIH0_RHOSR Tax_Id=101510 SubName: Full=Probable DNA polymerase I;[Rhodococcus sp.] Length = 318 Score = 323 bits (828), Expect = 2e-86 Identities = 172/313 (54%), Positives = 210/313 (67%), Gaps = 4/313 (1%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M PLLLLDGAS+WFR+Y+ +P SIT+PDGR +NAVRGF D +A +IT+H+PSRLAVCLD Sbjct: 1 MTGPLLLLDGASLWFRAYYALPDSITSPDGRSVNAVRGFTDMVAALITKHQPSRLAVCLD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 LDWRP FRV+ +P+YKAHRVAE + EEVPD L+PQV MI+++L Sbjct: 61 LDWRPAFRVEAVPTYKAHRVAEDTGGAE---EEVPDTLSPQVPMILDVLAATGIATAGAE 117 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 VLGTLAA E RD +VV+GDRDLLQVV D PVPVRVLY+ RGL+KA L GP EV Sbjct: 118 GLEADDVLGTLAAIETRDTTIVVTGDRDLLQVVTDAPVPVRVLYVVRGLAKAELLGPDEV 177 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 A +YG+P D SDGLPGV G+GEKTA++L+ Q+GSL + AAA DP Sbjct: 178 AAKYGVPADRAGEAYAELALLRGDSSDGLPGVKGIGEKTASSLIMQYGSLAALRAAAVDP 237 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 +S MAKG R K AA+ Y+DAA VVRV DA V + D LP D R LA E Sbjct: 238 ESDMAKGARAKFAAAADYLDAALPVVRVVRDAEVELSR-EDTLPAEPVDADRLGRLAEEL 296 Query: 301 GVGSSIARLQKAL 313 G+ +S+ RL A+ Sbjct: 297 GIENSVGRLTAAM 309 >tr|C7MWU3|C7MWU3_SACVD Tax_Id=471857 SubName: Full=5'-3' exonuclease (Including N-terminal domain of PolI);[Saccharomonospora viridis] Length = 320 Score = 316 bits (810), Expect = 2e-84 Identities = 169/313 (53%), Positives = 209/313 (66%), Gaps = 2/313 (0%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M APL+LLD AS++FRS+F +P S+TAPDG P+NAVRGF D++A V+T RP+RL CLD Sbjct: 1 MTAPLVLLDAASLYFRSFFALPESLTAPDGTPVNAVRGFADTVARVLTDRRPARLVACLD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 DWRP+FRV +PSYKAHRVAE G PDVEEVPD LTPQV +I+ELL Sbjct: 61 ADWRPEFRVRALPSYKAHRVAESSEEG-PDVEEVPDTLTPQVPIILELLEAVGIATAEAE 119 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 V+GTLAA+E + PV VV+GDRDL Q+V +P PV V+Y+G+G +KA + GP+EV Sbjct: 120 GFEADDVIGTLAAREAQLPVEVVTGDRDLFQLVRSEPSPVSVIYVGKGWAKAEVLGPAEV 179 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 A RYGLP DPSDGLPGVPG+GEKTAA L+ + GSL+ +VAAA D Sbjct: 180 AARYGLPAEHAGAAYADMAMLRGDPSDGLPGVPGIGEKTAAKLVTRFGSLEALVAAARDG 239 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 + RTKL+ +S Y+ AA VVRVATDAPV D +P P+R AELA Y Sbjct: 240 HPDVPPRARTKLVESSDYLAAAPLVVRVATDAPV-IGVDDDHVPHEPVAPERVAELAERY 298 Query: 301 GVGSSIARLQKAL 313 +G S+ RL AL Sbjct: 299 NLGGSVTRLLAAL 311 >tr|Q5YUY4|Q5YUY4_NOCFA Tax_Id=37329 SubName: Full=Putative 5'-3' exonuclease;[Nocardia farcinica] Length = 326 Score = 314 bits (804), Expect = 1e-83 Identities = 167/315 (53%), Positives = 207/315 (65%), Gaps = 5/315 (1%) Query: 2 PAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDL 61 P PLLLLDGAS+WFR++ +P +TAPDGR +NAVRGF D +A +IT+ P RL V LDL Sbjct: 13 PCPLLLLDGASLWFRAFHAIPDKLTAPDGRSVNAVRGFTDMVASLITRFGPGRLVVALDL 72 Query: 62 DWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXX 121 DWRP FRV+L+PSYK HR+ +P+G P E VPD LTPQVDMI+++L Sbjct: 73 DWRPTFRVELVPSYKTHRL---DPSGDPTAELVPDRLTPQVDMILDVLAAAGIATGGAAG 129 Query: 122 XXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPV-PVRVLYLGRGLSKATLFGPSEV 180 VLGTLA +E+ D VVVVSGDRDLLQ+V DDP PVRV Y GRGL+KA LFGP+EV Sbjct: 130 LEADDVLGTLADRERDDDVVVVSGDRDLLQLVRDDPAPPVRVFYAGRGLAKAELFGPAEV 189 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 + +YG+P D SDGLPGVPG+G+K+AATL+++ GSL+ + AA D Sbjct: 190 SAKYGVPLENAGPAYADMATLRGDASDGLPGVPGIGDKSAATLISRFGSLEALCAAVEDA 249 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 + +A GVR KL AA Y+ AA VVRV DA V + P D LP AD R +L T Y Sbjct: 250 DADLAPGVRAKLRAAEDYLKAAAPVVRVVRDATVDLSRP-DTLPTEPADRDRLLDLGTRY 308 Query: 301 GVGSSIARLQKALDA 315 S + RL KA+ A Sbjct: 309 NAESPVQRLIKAMAA 323 >tr|C2AQ99|C2AQ99_TSUPA Tax_Id=521096 SubName: Full=5'-3' exonuclease (Including N-terminal domain of PolI);[Tsukamurella paurometabola DSM 20162] Length = 317 Score = 307 bits (787), Expect = 9e-82 Identities = 163/310 (52%), Positives = 199/310 (64%), Gaps = 4/310 (1%) Query: 4 PLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDW 63 PL+LLD A +WFR+Y+ +P + A DGR +NA+RGF+D + +I HRP RL CLDLDW Sbjct: 10 PLMLLDSAGLWFRAYYAIPDKVKAADGRSVNALRGFLDMTSQLIATHRPGRLVACLDLDW 69 Query: 64 RPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXX 123 RP FRVDL+P+YK HRVAE G EEVPD L PQVDMI+E+L Sbjct: 70 RPAFRVDLLPTYKTHRVAEDAEDG---AEEVPDTLAPQVDMILEVLDAVGIATAGAEGLE 126 Query: 124 XXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAER 183 VLGTLAAQEQ DPV+VVSGDRDLLQV D P PV+ LY+GRG++KA +FGP+EVAE+ Sbjct: 127 ADDVLGTLAAQEQVDPVIVVSGDRDLLQVADDTPPPVKCLYIGRGIAKAEMFGPAEVAEK 186 Query: 184 YGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKST 243 YGLP DPSDGLPGVPG+GEKTA+ LL Q+GSL I AA S Sbjct: 187 YGLPADRAGEAYAELALLRGDPSDGLPGVPGIGEKTASKLLLQYGSLAAIRDAAAQQPSP 246 Query: 244 MAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVG 303 + ++ +S Y+DAA VV V A V + P DA+P DPQR AELA E +G Sbjct: 247 LPARAAASIVNSSDYLDAAWDVVWVRRAADVAVSGP-DAVPAEPRDPQRLAELAVELRIG 305 Query: 304 SSIARLQKAL 313 + + RL AL Sbjct: 306 AQVERLLAAL 315 >tr|A4FC00|A4FC00_SACEN Tax_Id=405948 SubName: Full=Potential 5'-3' exonuclease; EC=3.1.11.-;[Saccharopolyspora erythraea] Length = 305 Score = 296 bits (758), Expect = 2e-78 Identities = 156/308 (50%), Positives = 198/308 (64%), Gaps = 5/308 (1%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +L+D A +WFRSYF +P S+TAPDG P+N+VRGF D +A ++T+ RP+RL CLD DWRP Sbjct: 1 MLIDSAGLWFRSYFALPDSLTAPDGTPVNSVRGFCDMLAKLVTERRPARLVACLDNDWRP 60 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 QFRVD +PSYKAHRVAE + PD EEVPD LTPQ+ +I+ELL Sbjct: 61 QFRVDALPSYKAHRVAEED----PDAEEVPDTLTPQIPVILELLDALGIATAEAEGFEAD 116 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 V+G LA +E +D V VV+GDRDL Q+V +P PVRV+Y+G GLSKA +GP E+AERYG Sbjct: 117 DVIGALAHRETQDRVEVVTGDRDLFQLVRTEPTPVRVIYVGGGLSKAQNYGPEELAERYG 176 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 L DPSDGLPGV G+GEKTAA L+ Q GSLD ++AAA + Sbjct: 177 LSPGRAGDDYADMAVLRGDPSDGLPGVAGIGEKTAAKLITQFGSLDALLAAAVEGTGVTP 236 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGSS 305 + VR L A+ Y+ AA +VVR APV DALP A D +R EL +G+G+S Sbjct: 237 R-VRALLADAADYLAAAPAVVRTVNTAPVVVDRVDDALPSKAVDHERVVELQKRWGLGAS 295 Query: 306 IARLQKAL 313 + RL A+ Sbjct: 296 VDRLLAAV 303 >tr|C6WIF4|C6WIF4_ACTMD Tax_Id=446462 SubName: Full=5'-3' exonuclease;[Actinosynnema mirum] Length = 349 Score = 293 bits (749), Expect = 2e-77 Identities = 156/313 (49%), Positives = 199/313 (63%), Gaps = 7/313 (2%) Query: 3 APLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLD 62 +PL+L+D AS++FRS++ +P S+TAPDG P+NAVRGF+D++A ++ SRL CLD D Sbjct: 37 SPLVLMDAASLYFRSFYALPESMTAPDGTPVNAVRGFVDTIAKIVNDRNASRLVACLDAD 96 Query: 63 WRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXX 122 WRP+FRV +PSYKAHRVAE D EEVPD LTPQV +I+++L Sbjct: 97 WRPEFRVAALPSYKAHRVAE-----SGDAEEVPDTLTPQVPIILDVLDAVGIATAEAPGY 151 Query: 123 XXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAE 182 V+GTLAA+E +PV VV+GDRDL QVV P P VLYLGRG +KA L GP+E+A Sbjct: 152 EADDVIGTLAARETTNPVEVVTGDRDLFQVVRTTPTPAGVLYLGRGWAKAELVGPAELAA 211 Query: 183 RYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKS 242 +Y LP DPSDGLPGV G+GEKTAA L+ + GSL+ ++AA HD + Sbjct: 212 KYALPEEDAGRAYAGMAVLRGDPSDGLPGVAGIGEKTAAKLITEFGSLEALLAAVHDGRD 271 Query: 243 -TMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYG 301 + R L+AA Y+ A +VV VA DAPVT D LP ADP R EL +G Sbjct: 272 RKLTTKARNALIAAEDYLAVAPTVVNVALDAPVT-QDRDDTLPTTPADPARLTELTKRWG 330 Query: 302 VGSSIARLQKALD 314 +GSSI RL AL+ Sbjct: 331 LGSSIPRLVTALE 343 >tr|C8XAN2|C8XAN2_NAKMY Tax_Id=479431 SubName: Full=5'-3' exonuclease;[Nakamurella multipartita] Length = 333 Score = 259 bits (662), Expect = 3e-67 Identities = 149/335 (44%), Positives = 195/335 (58%), Gaps = 28/335 (8%) Query: 5 LLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWR 64 L LLD A ++FR+++ VP+S TAPDGRP+NAVRG +D +A V+ RP+R+ CLDLDWR Sbjct: 2 LQLLDLAGIYFRAFYAVPTSTTAPDGRPMNAVRGSLDIIARVMADARPTRVIACLDLDWR 61 Query: 65 PQFRVDLIPSYKAHRVAEPEPA-----------------------GQPDVEEVPDELTPQ 101 P +RV+LI SYK HRV EP A D+E VPDEL+PQ Sbjct: 62 PAWRVELIESYKTHRVLEPGSAQAASLAAAADALAAATPHSGTAGPSADIEVVPDELSPQ 121 Query: 102 VDMIMELLXXXXXXXXXXXXXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVR 161 V ++++ L V+GTLA E DPV VV+GDRDL QV DD PV Sbjct: 122 VPILLDTLAAIGITVAGAPGFEADDVIGTLAHAESVDPVEVVTGDRDLFQVARDDAPPVT 181 Query: 162 VLYLGRGLSKATLFGPSEVAERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAA 221 V Y+G G+SKA ++ ++VA RYG+P DPSDGLPGV GVGEKTAA Sbjct: 182 VRYIGAGMSKAKVYSAADVAARYGIP----ADSYADFAALRGDPSDGLPGVAGVGEKTAA 237 Query: 222 TLLAQHGSLDRIVAAAHDPKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTD 281 TL+ + GS++ ++ A + +A GVR+KL AA Y+ A VVRVA DAPV+ D Sbjct: 238 TLIGRFGSIEGLIEALDARSTGLAPGVRSKLAAARDYLLVAPRVVRVAQDAPVSVEPAGD 297 Query: 282 A-LPLVAADPQRTAELATEYGVGSSIARLQKALDA 315 LP DPQ ++L +G+G + RL + L A Sbjct: 298 GRLPAEPVDPQALSDLIRAHGIGGPVNRLLQTLTA 332 >tr|A4X757|A4X757_SALTO Tax_Id=369723 SubName: Full=5'-3' exonuclease;[Salinispora tropica] Length = 315 Score = 257 bits (657), Expect = 1e-66 Identities = 152/316 (48%), Positives = 196/316 (62%), Gaps = 15/316 (4%) Query: 1 MPAPLLLLDGASMWFRSYFGVP-SSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCL 59 MPAPL+L+D S++FR+YFG+P S+ PDG+P+NAVRGF+D +A +I RP R+ + Sbjct: 11 MPAPLMLVDAPSLYFRAYFGIPESAAVGPDGQPVNAVRGFLDMLASLIRTRRPDRMVCAM 70 Query: 60 DLDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXX 119 D DWRP++RV L+PSYKAHRVA P G E VPD L+PQV +I+++L Sbjct: 71 DHDWRPEWRVALLPSYKAHRVA---PEGG---EVVPDTLSPQVPLILDVLDALGITTVGA 124 Query: 120 XXXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSE 179 VLGTL+ Q PV VVSGDRDL Q+V DD VR+LY+GRG++K + Sbjct: 125 TGYEADDVLGTLSVT-QPGPVEVVSGDRDLFQLV-DDARGVRLLYVGRGVAKLADCDDAA 182 Query: 180 VAERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHD 239 V RYG+P DPSDGLPGVPGVGEKTAA L+ +HG + ++AA D Sbjct: 183 VQARYGVPAARYADFAALRG----DPSDGLPGVPGVGEKTAARLVDRHGDIAGVLAALDD 238 Query: 240 PKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATE 299 P + A G+RTKL AA Y+ A +VVRVA D P+ PTD LP ADP R ELA Sbjct: 239 PDAGFAPGLRTKLTAARDYLAVAPTVVRVALDVPLP-ALPTD-LPATPADPDRLLELAER 296 Query: 300 YGVGSSIARLQKALDA 315 + + ++ RL AL A Sbjct: 297 WNLAGAVRRLVDALAA 312 >tr|B1W336|B1W336_STRGG Tax_Id=455632 SubName: Full=Putative 5'-3' exonuclease;[Streptomyces griseus subsp. griseus] Length = 307 Score = 254 bits (648), Expect = 1e-65 Identities = 147/313 (46%), Positives = 187/313 (59%), Gaps = 8/313 (2%) Query: 1 MPAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLD 60 M L+LLD AS++FR+YFGVP S+ APDG P+NAVRG +D + ++ HRP L C D Sbjct: 1 MTRRLMLLDTASLYFRAYFGVPDSVRAPDGTPVNAVRGLLDFIGRLVQDHRPDDLVACWD 60 Query: 61 LDWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXX 120 DWRPQ+RVDLIP+YKAHRVAE PAGQ D EEVPD L+PQV +I ++L Sbjct: 61 NDWRPQWRVDLIPTYKAHRVAEETPAGQTDEEEVPDTLSPQVPIIEDVLAALGIARVGVT 120 Query: 121 XXXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 V+GTLA + PV +V+GDRDL Q+V DD VRVLY +G+ + + + Sbjct: 121 PYEADDVIGTLAGR-ATGPVDIVTGDRDLYQLV-DDARQVRVLYPLKGVGTLQVTDEAWL 178 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 +YG+ DPSDGLPGVPG+GEKTAA LL +G LD I+AA DP Sbjct: 179 RGKYGV----DGAGYVDLALLRGDPSDGLPGVPGIGEKTAAKLLDAYGDLDGIMAAVDDP 234 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 K+ + R +L A AY+ A VVRVA D P+ P ALP DP LA + Sbjct: 235 KAKLTPSQRKRLDEARAYVAVAPKVVRVAGDVPLPDFDP--ALPREPRDPAALEALAERW 292 Query: 301 GVGSSIARLQKAL 313 G+G ++ RL AL Sbjct: 293 GLGGALQRLLTAL 305 >tr|D1BRL4|D1BRL4_9MICO Tax_Id=446471 SubName: Full=5'-3' exonuclease;[Xylanimonas cellulosilytica DSM 15894] Length = 313 Score = 247 bits (630), Expect = 2e-63 Identities = 145/315 (46%), Positives = 195/315 (61%), Gaps = 11/315 (3%) Query: 5 LLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWR 64 LLLLD AS++FR+++GVP S+ +P G P+NA+RG +D++A ++T+HRP RL C D DWR Sbjct: 3 LLLLDTASLYFRAFYGVPDSLRSPRGEPVNAIRGLLDTIAFLVTEHRPERLVACWDDDWR 62 Query: 65 PQFRVDLIPSYKAHRVAEPEPA-GQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXX 123 PQ+RVDLI SYKAHRVA P+ G DVEEVPD L+PQV +I +L Sbjct: 63 PQWRVDLIGSYKAHRVAVPDAGPGGTDVEEVPDLLSPQVPVIASVLEAIGIARIGSPGFE 122 Query: 124 XXXVLGTLAAQE---QRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEV 180 V+GTL A+E R P +++GDRDL Q+V DD VRVLY RG+ + + + Sbjct: 123 ADDVIGTLVAREVAAGRRPTSIMTGDRDLFQLV-DDDAGVRVLYPARGVRDPDVVDQARL 181 Query: 181 AERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDP 240 AE+YG+P DPSDGLPGV G+GEKTAA LLA+ G+LD ++ AA D Sbjct: 182 AEKYGVP---SGDAYADMAVLRGDPSDGLPGVVGIGEKTAAGLLARFGTLDGVL-AARDS 237 Query: 241 KSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEY 300 + + +L A+ Y+ A +VVRVATDAP+ DALP AA P+ L + Sbjct: 238 GFGLTPAQQRRLTEAAEYLTVAPTVVRVATDAPL--PDFDDALPRAAAYPEALQLLTERW 295 Query: 301 GVGSSIARLQKALDA 315 G+ SS++R+ AL A Sbjct: 296 GLRSSVSRVLTALAA 310 >tr|Q828F5|Q828F5_STRAW Tax_Id=33903 SubName: Full=Putative 5'-3' exonuclease;[Streptomyces avermitilis] Length = 309 Score = 246 bits (628), Expect = 3e-63 Identities = 143/311 (45%), Positives = 185/311 (59%), Gaps = 9/311 (2%) Query: 5 LLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWR 64 L+LLD AS++FR+YFGVP S+ APDG P+NAVRG ++ + ++ HRP L C+D DWR Sbjct: 8 LMLLDTASLYFRAYFGVPDSVKAPDGTPVNAVRGLLEFIDRLVKDHRPDELVACMDADWR 67 Query: 65 PQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXX 124 PQ+RVDLIPSYKAHRVAE +G PD EEVPD L+PQV +I +L Sbjct: 68 PQWRVDLIPSYKAHRVAEERESG-PDEEEVPDTLSPQVPVIENVLDALGIARVGVEGYEA 126 Query: 125 XXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERY 184 V+GT A+ + PV +V+GDRDL Q+V DD +RVLY +G+ L + + E+Y Sbjct: 127 DDVIGTFTAR-AKGPVDIVTGDRDLYQLV-DDERGIRVLYPLKGVGLLQLTDEAWLREKY 184 Query: 185 GLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTM 244 G+ DPSDGLPGVPG+GEKTAA LLA+ G L I+AA DPK+ + Sbjct: 185 GV----DGGGYADLALLRGDPSDGLPGVPGIGEKTAAKLLAEFGDLAGIMAAVDDPKAKL 240 Query: 245 AKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGS 304 R +L + Y+ A VVRVA D P+ T LP DP ELA +G+G Sbjct: 241 TPSQRKRLDESRPYLAVAPKVVRVAGDVPLPDVDIT--LPGAPRDPAALDELAARWGLGG 298 Query: 305 SIARLQKALDA 315 S+ RL L A Sbjct: 299 SLHRLLSTLQA 309 >tr|A8M2B7|A8M2B7_SALAI Tax_Id=391037 SubName: Full=5'-3' exonuclease;[Salinispora arenicola] Length = 353 Score = 246 bits (628), Expect = 3e-63 Identities = 148/314 (47%), Positives = 192/314 (61%), Gaps = 15/314 (4%) Query: 3 APLLLLDGASMWFRSYFGVP-SSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDL 61 AP++L+D S++FR+YFG+P S+ TAP G+P+NAVRGF+D +A +I P R+ +D Sbjct: 51 APIMLVDAPSLYFRAYFGIPESAATAPGGQPVNAVRGFLDMLASLIRTRGPGRMVCAMDH 110 Query: 62 DWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXX 121 DWRP +RV L+PSYKAHRVA P G E VPD L+PQV +I+++L Sbjct: 111 DWRPDWRVALLPSYKAHRVA---PEGG---EVVPDTLSPQVPVILDVLDALGIATVGASG 164 Query: 122 XXXXXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVA 181 VLGTL+ Q PV VVSGDRDL Q+V DD VR+LY+GRG++K + V Sbjct: 165 YEADDVLGTLSVT-QPGPVEVVSGDRDLFQLV-DDARGVRLLYIGRGVAKLADCDDTAVR 222 Query: 182 ERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPK 241 RYG+P DPSDGLPGVPGVGEKTAA L+ +HG + ++AA DP Sbjct: 223 ARYGVPAARYADFAALRG----DPSDGLPGVPGVGEKTAARLVDRHGDISGVLAALDDPG 278 Query: 242 STMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYG 301 + A G+R KL AA Y+ A +VVRVA D P+ TD LP V ADP R +LA + Sbjct: 279 AGFAPGLRAKLAAARDYLAVAPTVVRVALDVPLP-ALSTD-LPTVPADPDRLLDLAERWN 336 Query: 302 VGSSIARLQKALDA 315 V ++ RL AL A Sbjct: 337 VAGAVRRLVDALAA 350 >sp|Q9RJ79|EX53_STRCO Tax_Id=1902 RecName: Full=5'-3' exonuclease; EC=3.1.11.-;[Streptomyces coelicolor] Length = 301 Score = 246 bits (627), Expect = 3e-63 Identities = 144/310 (46%), Positives = 181/310 (58%), Gaps = 9/310 (2%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +LLD AS++FR+YFGVP S+ APDG P+NAVRG +D + ++ HRP L C+D DWRP Sbjct: 1 MLLDTASLYFRAYFGVPDSVKAPDGTPVNAVRGLLDFIDRLVKDHRPEHLVACMDADWRP 60 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 +RV+LIPSYKAHRVAE PAG PD EEVPD L+PQV +I +L Sbjct: 61 HWRVELIPSYKAHRVAEERPAG-PDAEEVPDTLSPQVPVIEAVLDALGIARVGVAGYEAD 119 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 V+GT A+ PV +V+GDRDL Q+V DD VRVLY +G+ L + + E+YG Sbjct: 120 DVIGTYTAR-ATGPVDIVTGDRDLYQLV-DDARGVRVLYPVKGVGTLNLVDEAALREKYG 177 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 + DPSDGLPGVPG+GEKTAA LLA+ G L I AA DPK+ + Sbjct: 178 V----DGAGYADLALLRGDPSDGLPGVPGIGEKTAAKLLAEFGDLAGIQAAVDDPKARLT 233 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGSS 305 R +L A Y+ A VVRVA D P+ T ALP D LA +G+G S Sbjct: 234 PTQRKRLTEAGPYLAVAPKVVRVAADVPLPDT--GTALPHGPRDAAALEALAARWGLGGS 291 Query: 306 IARLQKALDA 315 + RL L A Sbjct: 292 LQRLLTTLTA 301 >tr|C1RPN4|C1RPN4_9CELL Tax_Id=446466 SubName: Full=5'-3' exonuclease (Including N-terminal domain of PolI);[Cellulomonas flavigena DSM 20109] Length = 326 Score = 245 bits (626), Expect = 4e-63 Identities = 144/315 (45%), Positives = 187/315 (59%), Gaps = 13/315 (4%) Query: 5 LLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWR 64 LLLLD AS++FR++FGVP S+ APDG P+NAVRG ++ +A ++ RP+RL C D DWR Sbjct: 11 LLLLDSASLYFRAFFGVPDSVRAPDGTPVNAVRGLVEMIARLVADRRPTRLVACWDDDWR 70 Query: 65 PQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXX 124 P FRV+ +PSYKAHRVA P G EEVP+ LT QV +I+E+L Sbjct: 71 PAFRVEAVPSYKAHRVAREVP-GTTGEEEVPEALTAQVPVIVEVLAALGIPRLGAPGHEA 129 Query: 125 XXVLGTLAAQE------QRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPS 178 V+GTL A+E +R V VV+GDRDL Q+V DD VPVRVLY +G+ Sbjct: 130 DDVIGTLVAREAARPAAERAAVDVVTGDRDLFQLV-DDAVPVRVLYPVKGVKDLLEVDQG 188 Query: 179 EVAERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAH 238 + ERYG+P DPSDGLPGVPG+GEKTAA+LLA++G+L+ ++AA Sbjct: 189 VLVERYGVP---TGRAYADMAVLRGDPSDGLPGVPGIGEKTAASLLARYGTLEGVLAARD 245 Query: 239 DPKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELAT 298 + RT+L A+ Y+ A VV VA DAPV D LP V ADP LA Sbjct: 246 AADRGLTATQRTRLTDAADYLAVAPRVVTVAPDAPV--ADVDDRLPAVPADPDALVTLAE 303 Query: 299 EYGVGSSIARLQKAL 313 +G+ SS+ R+ L Sbjct: 304 RWGLSSSLRRIVDVL 318 >tr|C5C2Q9|C5C2Q9_BEUC1 Tax_Id=471853 SubName: Full=5'-3' exonuclease;[Beutenbergia cavernae] Length = 319 Score = 244 bits (622), Expect = 1e-62 Identities = 141/317 (44%), Positives = 186/317 (58%), Gaps = 13/317 (4%) Query: 5 LLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWR 64 LLLLD ASM+FR++FGVP S+ +PDG+PI AVRGF++++ +++T PSRL C D DWR Sbjct: 7 LLLLDSASMYFRAFFGVPDSVRSPDGQPIGAVRGFLEAITLLLTTRSPSRLVACWDDDWR 66 Query: 65 PQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXX 124 P FRV IPSYKAHRVA P G EEVPD L+ QV +I+E L Sbjct: 67 PAFRVAAIPSYKAHRVARDVP-GTTGEEEVPDALSVQVPVIVEALAAIGIPRIGRPGYEA 125 Query: 125 XXVLGTLAAQE------QRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPS 178 V+GT A E +R V +V+GDRDL Q+V DD P+RVLY RG+ + + Sbjct: 126 DDVIGTFATLEAGRPDGERSAVEIVTGDRDLFQLV-DDDAPIRVLYTARGMRDLDVVDVA 184 Query: 179 EVAERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAH 238 + ERYG+ DPSDGLPGVPG+GEKTA LL ++G L ++ A Sbjct: 185 RLRERYGV---ASGAAYADMAALRGDPSDGLPGVPGIGEKTAVALLNRYGDLAGVLRARD 241 Query: 239 DPKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELAT 298 D ++ R +L A+ Y+D A +VV+VA D PV DALP ADP LA Sbjct: 242 DGDPGLSATQRKRLTEAAGYLDVAPTVVQVARDVPVGVV--DDALPTAPADPDALDALAE 299 Query: 299 EYGVGSSIARLQKALDA 315 +G+G +++RL +AL A Sbjct: 300 RWGLGGAVSRLVEALAA 316 >tr|C9Z4G1|C9Z4G1_STRSW Tax_Id=680198 SubName: Full=Putative 5'-3' exonuclease;[Streptomyces scabies] Length = 316 Score = 241 bits (615), Expect = 8e-62 Identities = 143/311 (45%), Positives = 181/311 (58%), Gaps = 9/311 (2%) Query: 5 LLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWR 64 L+LLD AS++FR+YFGVP S+ APDG P+NAVRG ++ + ++ HRP+ L C D DWR Sbjct: 15 LMLLDTASLYFRAYFGVPESVKAPDGTPVNAVRGLLEFIDRLVKDHRPTDLVACTDADWR 74 Query: 65 PQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXX 124 PQ+RVDLIPSYKAHRVAE AG PD E+VPD L+PQV +I +L Sbjct: 75 PQWRVDLIPSYKAHRVAEEHEAG-PDEEQVPDTLSPQVPVIEAVLDALGIARVGVAGYEA 133 Query: 125 XXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERY 184 V+GT A +DPV +V+GDRDL Q+V DD VRVLY +G+ L + + E+Y Sbjct: 134 DDVIGTFTAL-AKDPVDIVTGDRDLYQLV-DDAREVRVLYPLKGVGTLQLTDEAWLREKY 191 Query: 185 GLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTM 244 G+ DPSDGLPGVPG+GEKTAA LL Q G L I+AA DP + + Sbjct: 192 GV----VGRGYADLALLRGDPSDGLPGVPGIGEKTAAKLLDQFGDLAGIMAAVDDPAAKL 247 Query: 245 AKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGS 304 R +L A Y+ A VV VA D P+ ALP DP LA +G+G Sbjct: 248 TPSQRKRLDEARPYVAVAPKVVLVAADVPL--PDVDTALPHAPKDPAALEALAERWGLGG 305 Query: 305 SIARLQKALDA 315 S+ RL L A Sbjct: 306 SLQRLLGTLQA 316 >tr|A1SK27|A1SK27_NOCSJ Tax_Id=196162 SubName: Full=5'-3' exonuclease;[Nocardioides sp.] Length = 301 Score = 240 bits (613), Expect = 1e-61 Identities = 148/309 (47%), Positives = 185/309 (59%), Gaps = 12/309 (3%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +LLD ASM+FR++FGVP I APDG P+NAVRG +D +A ++ +RP+ L C D DWRP Sbjct: 1 MLLDSASMYFRAFFGVPE-ILAPDGTPVNAVRGLLDFIARLVADYRPTHLVACWDNDWRP 59 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 Q+RVDL+PSYKAHRV E E G+PDVEEVP L QV +I E+L Sbjct: 60 QWRVDLLPSYKAHRV-EAERTGEPDVEEVPGPLEVQVPIIREVLAAFGICVLGADGYEAD 118 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 V+G+LA Q R PV VV+GDRDL Q+V DD VRVLY+ RG+ K V +YG Sbjct: 119 DVIGSLATQ-ARQPVDVVTGDRDLFQLV-DDEADVRVLYIARGVGKHERVTNDWVRTKYG 176 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 + D SDGLPGV GVGEKTAATLL + G + IVAAA DP S M Sbjct: 177 I----DARQYADFATLRGDASDGLPGVAGVGEKTAATLLGRFGDMAGIVAAALDPDSDMG 232 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDA-LPLVAADPQRTAELATEYGVGS 304 G R ++ AA+AY++ A +VV VA D + P D LP D R A+L +G+ S Sbjct: 233 PGPRGRIKAAAAYLEVAPTVVAVARDLDL---GPADTRLPDQPRDLPRLADLGHRWGIES 289 Query: 305 SIARLQKAL 313 + RL AL Sbjct: 290 PVQRLTDAL 298 >tr|C7PVW9|C7PVW9_CATAD Tax_Id=479433 SubName: Full=5'-3' exonuclease;[Catenulispora acidiphila] Length = 315 Score = 240 bits (612), Expect = 2e-61 Identities = 139/315 (44%), Positives = 190/315 (60%), Gaps = 10/315 (3%) Query: 2 PAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDL 61 P L++LD +++FR++FGVP +I +PDG +NAVRG ++S++ +I ++P RL C D Sbjct: 5 PERLMVLDTPTLYFRAFFGVPDTIRSPDGMVVNAVRGTVESVSYLINTYKPDRLVACFDA 64 Query: 62 DWRPQFRVDLIPSYKAHRVAEPEPAGQP--DVEEVPDELTPQVDMIMELLXXXXXXXXXX 119 DWRP FRV+ IPSYKAHRV E PAG DVEEVPD L+PQV +I L Sbjct: 65 DWRPAFRVEAIPSYKAHRVLEEAPAGGAGVDVEEVPDLLSPQVPVIEAALDALGIARAEA 124 Query: 120 XXXXXXXVLGTLAAQ-EQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPS 178 VL TLA + + R PV VV+ DRDL Q+V DD +RVL +G+G++K + Sbjct: 125 PGFEADDVLATLAERWDGRGPVDVVTMDRDLYQLV-DDTREIRVLNIGKGVTKLEVVTDQ 183 Query: 179 EVAERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAH 238 + E+YG+ DPSDGLPGV G+GEKTAA L++Q+ L + AAA Sbjct: 184 ILREKYGI----TGGEYADFAALRGDPSDGLPGVSGIGEKTAAALISQYKDLAGVRAAAE 239 Query: 239 DPKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELAT 298 DP ST+ R ++ A+ Y+DAA +VVRV DAPV D LP DP A LA Sbjct: 240 DPASTLKPAQRKRIAEAAGYLDAAPTVVRVVRDAPV--VEHDDRLPREPKDPIMAAMLAE 297 Query: 299 EYGVGSSIARLQKAL 313 ++GV +++ARL + + Sbjct: 298 KFGVKTAVARLTRVM 312 >tr|B5GEF4|B5GEF4_9ACTO Tax_Id=465543 SubName: Full=5'-3' exonuclease;[Streptomyces sp. SPB74] Length = 302 Score = 239 bits (611), Expect = 2e-61 Identities = 141/308 (45%), Positives = 181/308 (58%), Gaps = 8/308 (2%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +LLD AS++FR+YFGVP S+ APDG P+NAVRG +D +A ++ HRP L C+D DWRP Sbjct: 1 MLLDTASLYFRAYFGVPDSVRAPDGTPVNAVRGLLDFIAHLVQDHRPDSLVACMDADWRP 60 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 ++RV LIP YKAHRVA AG PD EEVPD L+PQV +I +L Sbjct: 61 EWRVALIPGYKAHRVAGETEAG-PDEEEVPDTLSPQVPVIEAVLDALGIARLGVPGYEAD 119 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 V+GTL + R PV +V+GDRDL Q+V DD VRVLY +G+ + + E+YG Sbjct: 120 DVIGTLTTR-ARGPVDIVTGDRDLFQLV-DDARGVRVLYPLKGVGSLQATDEAVLREKYG 177 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 + DPSDGLPGVPG+GEKTAA LLA +G LD I AAA DP S + Sbjct: 178 V----DGPGYADLATLRGDPSDGLPGVPGIGEKTAAKLLAAYGDLDGIRAAAADPASKIT 233 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGSS 305 R +L + Y+D A +VVRVA D V D LP D + A L +G+G S Sbjct: 234 PAQRRRLTESGPYLDVAPTVVRVARDLAVP-ADLDDRLPDEPRDGEALAALGERWGLGGS 292 Query: 306 IARLQKAL 313 + R+ + L Sbjct: 293 LDRVLRTL 300 >tr|B5I8L3|B5I8L3_9ACTO Tax_Id=463191 SubName: Full=5'-3' exonuclease;[Streptomyces sviceus ATCC 29083] Length = 301 Score = 239 bits (610), Expect = 3e-61 Identities = 140/310 (45%), Positives = 181/310 (58%), Gaps = 9/310 (2%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +LLD AS++FR+YFGVP S+ APDG P+NAVRG ++ + ++ H P L C+D DWRP Sbjct: 1 MLLDTASLYFRAYFGVPESVKAPDGTPVNAVRGLLEFIDRLVKDHHPDLLVACMDADWRP 60 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 Q+RVDLIPSYKAHRVAE +G PD EEVPD L+PQV +I +L Sbjct: 61 QWRVDLIPSYKAHRVAEEHESG-PDEEEVPDTLSPQVPVIEAVLDALGIARVGVAGYEAD 119 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 V+GT AQ PV +V+GDRDL Q+V DD VRVLY +G+ L + + E+YG Sbjct: 120 DVIGTFTAQ-ATGPVDIVTGDRDLYQLV-DDERQVRVLYPLKGVGTLQLTDEAWLREKYG 177 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 + DPSDGLPGVPG+GEKTAA LL Q G L I+AA DPK+ + Sbjct: 178 V----DGRGYVDLALLRGDPSDGLPGVPGIGEKTAAKLLDQFGDLAGIMAAVDDPKAKLT 233 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGSS 305 R +L + Y+ A VV+VA D P+ A+P DP +LA +G+G S Sbjct: 234 PSQRKRLDESRPYVAVAPKVVKVAGDVPL--PRVDTAVPRTPRDPAALEKLAERWGLGGS 291 Query: 306 IARLQKALDA 315 + RL L A Sbjct: 292 LQRLVATLGA 301 >tr|C9NE08|C9NE08_9ACTO Tax_Id=591167 SubName: Full=5'-3' exonuclease;[Streptomyces flavogriseus ATCC 33331] Length = 302 Score = 238 bits (608), Expect = 5e-61 Identities = 140/310 (45%), Positives = 178/310 (57%), Gaps = 8/310 (2%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +LLD AS++FR+YFGVP S+ APDG P+NAVRG +D +A ++ HRP L C+D DWRP Sbjct: 1 MLLDTASLYFRAYFGVPDSVRAPDGTPVNAVRGLLDFIARLVQDHRPDDLVACMDADWRP 60 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 Q+RVDLIP+YKAHRVA G PD EEVPD L+PQV +I +L Sbjct: 61 QWRVDLIPTYKAHRVAAETAEGLPDEEEVPDTLSPQVPVIEAVLDALGIARVGVSPYEAD 120 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 V+GTL + PV +V+GDRDL Q+V DD VRVLY +G+ + + +YG Sbjct: 121 DVIGTLTGR-ATGPVDIVTGDRDLYQLV-DDARGVRVLYPLKGVGTLQVTDEEWLRGKYG 178 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 + DPSDGLPGVPG+GEKTAA LL G L I+AA DP + + Sbjct: 179 V----DGAGYVDLALLRGDPSDGLPGVPGIGEKTAAKLLDAFGDLAGIMAAVDDPAARLT 234 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGSS 305 R +L A Y+ A VVRVA D P+ P ALP DP LA +G+G+S Sbjct: 235 PSQRRRLDEARDYVAVAPKVVRVADDVPLPGFDP--ALPREPRDPAALEALAARWGLGNS 292 Query: 306 IARLQKALDA 315 + RL L A Sbjct: 293 LQRLLLTLQA 302 >tr|B4VA87|B4VA87_9ACTO Tax_Id=465541 SubName: Full=5'-3' exonuclease;[Streptomyces sp. Mg1] Length = 301 Score = 238 bits (606), Expect = 9e-61 Identities = 137/308 (44%), Positives = 184/308 (59%), Gaps = 9/308 (2%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +LLD AS+++R+YFGVP S+ APDG P+NAVRG +D + ++ HRP L C+D DWRP Sbjct: 1 MLLDTASLYYRAYFGVPDSVKAPDGTPVNAVRGLLDFIGRLVQDHRPDDLVACMDADWRP 60 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 Q+RV+LIPSYKAHRVA G PD+E+ PD L PQV +I L Sbjct: 61 QWRVELIPSYKAHRVAVETETG-PDLEDTPDTLAPQVPIIEAALDAFGIARVGVAGYEAD 119 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 V+GTL A+ PV +V+GDRDL Q+V DD RVLY +G+ + + + E+YG Sbjct: 120 DVIGTLTARAS-GPVDIVTGDRDLYQLV-DDARGRRVLYPLKGVGTLQVTDEAWLREKYG 177 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 + DPSDGLPGVPG+GEKTAA LL +G+L I+AA DP+S + Sbjct: 178 V----DGPGYADLALLRGDPSDGLPGVPGIGEKTAAKLLDAYGNLAGIIAAIDDPRSRLT 233 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGSS 305 R +L + Y+ A +VV+VA+D P+ P ALP VAA P LA +G+G + Sbjct: 234 ATQRKRLDESRPYLAVAPTVVKVASDVPLPDFDP--ALPRVAAQPDLVDALAHRWGLGGA 291 Query: 306 IARLQKAL 313 ++RL AL Sbjct: 292 VSRLSSAL 299 >tr|B5H159|B5H159_STRCL Tax_Id=443255 SubName: Full=5'-3' exonuclease;[Streptomyces clavuligerus ATCC 27064] Length = 301 Score = 236 bits (601), Expect = 3e-60 Identities = 141/308 (45%), Positives = 176/308 (57%), Gaps = 9/308 (2%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +LLD AS++FR+YFGVP ++ APDG P+NAVRG ++ + ++ HRP L C D DWRP Sbjct: 1 MLLDTASLYFRAYFGVPDTVRAPDGTPVNAVRGLLEFIGRLVQDHRPDDLVACWDNDWRP 60 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 +RV+LIPSYKAHRVA AG PD EE PD LTPQV +I E+L Sbjct: 61 HWRVELIPSYKAHRVAVETEAG-PDEEEAPDTLTPQVPVIAEVLEALGIARVGADGYEAD 119 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 V+GTL A+ PV +V+GDRDL Q+V DD RVLY +G+ + ERYG Sbjct: 120 DVIGTLTAR-ATGPVDIVTGDRDLFQLV-DDARGRRVLYPLKGVGTLQTTDEGWLRERYG 177 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 + DPSDGLPGVPG+GEKTAA LL G L I+AA DP S + Sbjct: 178 V----DGPGYADLALLRGDPSDGLPGVPGIGEKTAAKLLDAFGDLAGIMAAVDDPASRLT 233 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGSS 305 R +L A Y+ A VVRVATDAP+ P ALP DP A L +G+G + Sbjct: 234 PAQRRRLDEARGYVAVAPKVVRVATDAPLPPFDP--ALPSAPRDPAALAALGERWGLGGA 291 Query: 306 IARLQKAL 313 + RL L Sbjct: 292 LQRLLTTL 299 >tr|A6W984|A6W984_KINRD Tax_Id=266940 SubName: Full=5'-3' exonuclease;[Kineococcus radiotolerans] Length = 320 Score = 233 bits (595), Expect = 2e-59 Identities = 140/324 (43%), Positives = 183/324 (56%), Gaps = 19/324 (5%) Query: 2 PAPLLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDL 61 P L+LLD AS+ FR++ GVP S+TAPDG P+NAVRGF+D++A ++ H P+RL C D Sbjct: 9 PGRLMLLDSASLCFRAFHGVPESLTAPDGTPVNAVRGFLDAIAHLVATHAPTRLVACWDD 68 Query: 62 DWRPQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXX 121 DWRP FRV +PSYKAHRV+ P G EE P L QVD+++E+L Sbjct: 69 DWRPAFRVAALPSYKAHRVS---PDGG---EETPAALPAQVDVVVEVLAALGVARVGAPG 122 Query: 122 XXXXXVLGTLAAQEQRD-------PVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATL 174 V+ TL A+ PV VV+GDRDL Q+V DD VR +Y G+G+ +A L Sbjct: 123 YEADDVMATLTARASTGSASRPGVPVDVVTGDRDLFQLV-DDAAGVRDVYCGKGVRRADL 181 Query: 175 FGPSEVAERYGLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIV 234 + +A RYG+ DPSDGLPGV G+GEKTAA L+ ++G L ++ Sbjct: 182 VDQAWLAARYGV---ASGAAYADVAVLRGDPSDGLPGVAGIGEKTAAALVGRYGDLAGVL 238 Query: 235 AAAHDPKSTMAKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTA 294 AAA DP S + R +LL A Y+ AA VV D P+ DALP ADP Sbjct: 239 AAAQDPASDLPPAQRRRLLGAGDYLAAAPVVVATVRDVPL--PEVDDALPREPADPAALE 296 Query: 295 ELATEYGVGSSIARLQKALDALPS 318 EL +GVGSS+ R+ A P+ Sbjct: 297 ELVRRWGVGSSVQRVLTAFTGAPA 320 >tr|B5H8I6|B5H8I6_STRPR Tax_Id=457429 SubName: Full=5'-3' exonuclease;[Streptomyces pristinaespiralis ATCC 25486] Length = 301 Score = 233 bits (593), Expect = 3e-59 Identities = 141/308 (45%), Positives = 177/308 (57%), Gaps = 9/308 (2%) Query: 6 LLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWRP 65 +LLD AS++FR+Y GVP S+ APDG P+NAVRG ID +A ++ HRP L C D DWRP Sbjct: 1 MLLDTASLYFRAYHGVPDSVRAPDGTPVNAVRGLIDFIARLVQDHRPDDLVACWDNDWRP 60 Query: 66 QFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXXX 125 Q+RVDLIPSYKAHRVA G PD EEVPD LTPQ+ +I +L Sbjct: 61 QWRVDLIPSYKAHRVAAEHDQG-PDEEEVPDTLTPQIPVIEAVLAAVGIARVGADGYEAD 119 Query: 126 XVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERYG 185 ++GTL A+ PV +V+GDRDL Q+V DD RVLY +G+ + + ERYG Sbjct: 120 DIIGTLTAR-ATGPVDIVTGDRDLFQLV-DDARERRVLYPLKGVGTLQTTDEAWLRERYG 177 Query: 186 LPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTMA 245 + DPSDGLPGVPG+GEKTAA LL +G LD I+AA D S + Sbjct: 178 V----DGPGYVDLALLRGDPSDGLPGVPGIGEKTAAKLLDTYGDLDGIMAAVGDRGSKLT 233 Query: 246 KGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGSS 305 R +L A AY+ A VVRVA+D V ALP DP L ++G+G + Sbjct: 234 PTQRRRLDEARAYVAVAPKVVRVASD--VALPEFDAALPGAPRDPVALDRLTEQWGLGGA 291 Query: 306 IARLQKAL 313 + RL AL Sbjct: 292 VVRLLNAL 299 >tr|C4DFE9|C4DFE9_9ACTO Tax_Id=446470 SubName: Full=5'-3' exonuclease (Including N-terminal domain of PolI);[Stackebrandtia nassauensis DSM 44728] Length = 303 Score = 232 bits (592), Expect = 4e-59 Identities = 137/311 (44%), Positives = 181/311 (58%), Gaps = 14/311 (4%) Query: 5 LLLLDGASMWFRSYFGVPSSITAPDGRPINAVRGFIDSMAVVITQHRPSRLAVCLDLDWR 64 L+L+D +W+RS++G+PSS+ PDG INAVRGFID +A +I H + LA +D DWR Sbjct: 2 LVLVDAPGLWYRSFYGLPSSLRGPDGTQINAVRGFIDGLATLIRNHNATGLACAVDNDWR 61 Query: 65 PQFRVDLIPSYKAHRVAEPEPAGQPDVEEVPDELTPQVDMIMELLXXXXXXXXXXXXXXX 124 P +RVDL+PSYK HR+A+ EE PD L QV +I +LL Sbjct: 62 PAWRVDLLPSYKTHRLAD------NGGEEEPDALPHQVAIITQLLTAWGIPVIGVDGYEA 115 Query: 125 XXVLGTLAAQEQRDPVVVVSGDRDLLQVVADDPVPVRVLYLGRGLSKATLFGPSEVAERY 184 VL TLA + PV V +GDRDL Q++ DD +RV+Y GRG++KA + + R+ Sbjct: 116 DDVLATLAT-TTKGPVGVATGDRDLFQLI-DDDNDIRVIYFGRGIAKAETLDDAALVARH 173 Query: 185 GLPXXXXXXXXXXXXXXXXDPSDGLPGVPGVGEKTAATLLAQHGSLDRIVAAAHDPKSTM 244 G+ DPSDGLPGV G+G+KTAATL+ HG+L AAA DP +TM Sbjct: 174 GV----HPDQYVDFAVLRGDPSDGLPGVKGIGDKTAATLITTHGNLTDARAAAADPATTM 229 Query: 245 AKGVRTKLLAASAYIDAARSVVRVATDAPVTFTTPTDALPLVAADPQRTAELATEYGVGS 304 A VR L + Y+DAA VVR A DAPV P +L ADPQ L+ YG+ + Sbjct: 230 APRVRKALTESGEYLDAAVKVVRTANDAPVPDIDP--SLRPEPADPQAVETLSDTYGLAN 287 Query: 305 SIARLQKALDA 315 S+ RL++AL A Sbjct: 288 SLNRLREALTA 298 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.135 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 2,113,448,600 Number of extensions: 79078187 Number of successful extensions: 238429 Number of sequences better than 10.0: 2358 Number of HSP's gapped: 234051 Number of HSP's successfully gapped: 2398 Length of query: 318 Length of database: 3,846,993,858 Length adjustment: 137 Effective length of query: 181 Effective length of database: 2,302,291,047 Effective search space: 416714679507 Effective search space used: 416714679507 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 80 (35.4 bits)