BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_3086 (64 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|B2HFV7|PUP_MYCMM Tax_Id=216594 (pup)RecName: Full=Prokaryotic... 54 6e-06 sp|Q0SIF8|PUP_RHOSR Tax_Id=101510 (pup)RecName: Full=Prokaryotic... 53 1e-05 sp|C1ASP8|PUP_RHOOB Tax_Id=632772 (pup)RecName: Full=Prokaryotic... 53 1e-05 sp|Q5YUX1|PUP_NOCFA Tax_Id=37329 (pup)RecName: Full=Prokaryotic ... 53 1e-05 sp|A1UHS8|PUP_MYCSK Tax_Id=189918 (pup)RecName: Full=Prokaryotic... 53 1e-05 sp|A3Q194|PUP_MYCSJ Tax_Id=164757 (pup)RecName: Full=Prokaryotic... 53 1e-05 sp|Q73YW7|PUP_MYCPA Tax_Id=1770 (pup)RecName: Full=Prokaryotic u... 53 1e-05 sp|B1MAI1|PUP_MYCA9 Tax_Id=561007 (pup)RecName: Full=Prokaryotic... 53 1e-05 sp|A0QFB4|PUP_MYCA1 Tax_Id=243243 (pup)RecName: Full=Prokaryotic... 53 1e-05 sp|Q53078|PUP1_RHOER Tax_Id=1833 (pup1)RecName: Full=Prokaryotic... 53 1e-05 sp|A0PQT4|PUP_MYCUA Tax_Id=362242 (pup)RecName: Full=Prokaryotic... 52 2e-05 sp|O33246|PUP_MYCTU Tax_Id=1773 (pup)RecName: Full=Prokaryotic u... 51 4e-05 sp|A5U4D7|PUP_MYCTA Tax_Id=419947 (pup)RecName: Full=Prokaryotic... 51 4e-05 sp|A0QZ48|PUP_MYCS2 Tax_Id=246196 (pup)RecName: Full=Prokaryotic... 51 4e-05 sp|A4TB63|PUP_MYCGI Tax_Id=350054 (pup)RecName: Full=Prokaryotic... 51 4e-05 sp|C1AQ27|PUP_MYCBT Tax_Id=561275 (pup)RecName: Full=Prokaryotic... 51 4e-05 sp|A1KKF4|PUP_MYCBP Tax_Id=410289 (pup)RecName: Full=Prokaryotic... 51 4e-05 sp|Q7TZ12|PUP_MYCBO Tax_Id=1765 (pup)RecName: Full=Prokaryotic u... 51 4e-05 tr|C6DPV0|C6DPV0_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 51 4e-05 tr|A5WP85|A5WP85_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 51 4e-05 tr|A4KIP2|A4KIP2_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 51 4e-05 tr|A2VJK9|A2VJK9_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 51 4e-05 sp|A1TAP5|PUP_MYCVP Tax_Id=350058 (pup)RecName: Full=Prokaryotic... 50 6e-05 sp|C0ZZU8|PUP_RHOE4 Tax_Id=234621 (pup)RecName: Full=Prokaryotic... 50 8e-05 sp|Q53082|PUP2_RHOER Tax_Id=1833 (pup2)RecName: Full=Prokaryotic... 50 8e-05 tr|C3JTB8|C3JTB8_RHOER Tax_Id=596309 SubName: Full=Ubiquitin ana... 50 8e-05 tr|D0LDT0|D0LDT0_GORB4 Tax_Id=526226 SubName: Full=Putative unch... 47 5e-04 tr|C8XAQ5|C8XAQ5_NAKMY Tax_Id=479431 SubName: Full=Putative unch... 47 0.001 tr|C6WID7|C6WID7_ACTMD Tax_Id=446462 SubName: Full=Putative unch... 47 0.001 sp|Q9ZBE0|PUP_MYCLE Tax_Id=1769 (pup)RecName: Full=Prokaryotic u... 46 0.002 sp|B8ZRF2|PUP_MYCLB Tax_Id=561304 (pup)RecName: Full=Prokaryotic... 46 0.002 tr|C2AQ84|C2AQ84_TSUPA Tax_Id=521096 SubName: Full=Putative unch... 45 0.003 sp|A4FBY0|PUP1_SACEN Tax_Id=405948 (pup1)RecName: Full=Prokaryot... 43 0.013 tr|C7MWV8|C7MWV8_SACVD Tax_Id=471857 SubName: Full=Putative unch... 40 0.065 tr|C4ER31|C4ER31_STRRS Tax_Id=479432 SubName: Full=Putative unch... 38 0.42 tr|C7PVV1|C7PVV1_CATAD Tax_Id=479433 SubName: Full=Putative unch... 37 0.55 sp|A0LU49|PUP_ACIC1 Tax_Id=351607 (pup)RecName: Full=Prokaryotic... 37 0.94 sp|B1W305|PUP_STRGG Tax_Id=455632 (pup)RecName: Full=Prokaryotic... 36 1.2 tr|D1A2S7|D1A2S7_THECU Tax_Id=471852 SubName: Full=Putative unch... 36 1.2 sp|Q7AKQ4|PUP_STRCO Tax_Id=1902 (pup)RecName: Full=Prokaryotic u... 35 2.1 sp|Q828J0|PUP_STRAW Tax_Id=33903 (pup)RecName: Full=Prokaryotic ... 35 2.1 sp|A8LH55|PUP_FRASN Tax_Id=298653 (pup)RecName: Full=Prokaryotic... 35 2.1 sp|Q2J9Q2|PUP_FRASC Tax_Id=106370 (pup)RecName: Full=Prokaryotic... 35 2.1 tr|C9Z4C9|C9Z4C9_STRSW Tax_Id=680198 SubName: Full=Putative unch... 35 2.1 tr|C9NDY1|C9NDY1_9ACTO Tax_Id=591167 SubName: Full=Putative unch... 35 2.1 tr|B5I543|B5I543_9ACTO Tax_Id=463191 SubName: Full=Putative unch... 35 2.1 tr|B5H8K7|B5H8K7_STRPR Tax_Id=457429 SubName: Full=Predicted pro... 35 2.1 tr|B5H180|B5H180_STRCL Tax_Id=443255 SubName: Full=Putative unch... 35 2.1 tr|B5GEC8|B5GEC8_9ACTO Tax_Id=465543 SubName: Full=Predicted pro... 35 2.1 tr|B4VAB0|B4VAB0_9ACTO Tax_Id=465541 SubName: Full=Putative unch... 35 2.1 >sp|B2HFV7|PUP_MYCMM Tax_Id=216594 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium marinum] Length = 64 Score = 53.9 bits (128), Expect = 6e-06 Identities = 32/64 (50%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKLAQ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDEDVTGTTAAGQERREKLAQDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q0SIF8|PUP_RHOSR Tax_Id=101510 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Rhodococcus sp.] Length = 64 Score = 52.8 bits (125), Expect = 1e-05 Identities = 31/64 (48%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKLA+ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRTGGGDEDDTPGADGAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|C1ASP8|PUP_RHOOB Tax_Id=632772 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Rhodococcus opacus] Length = 64 Score = 52.8 bits (125), Expect = 1e-05 Identities = 31/64 (48%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKLA+ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRTGGGDEDDTPGGDGAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q5YUX1|PUP_NOCFA Tax_Id=37329 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Nocardia farcinica] Length = 64 Score = 52.8 bits (125), Expect = 1e-05 Identities = 31/64 (48%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKLA+ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRTGGGDEDEGSAGPEAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A1UHS8|PUP_MYCSK Tax_Id=189918 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium sp.] Length = 64 Score = 52.8 bits (125), Expect = 1e-05 Identities = 31/64 (48%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKLA+ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGEDDDLSGGAGAGQERREKLAEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A3Q194|PUP_MYCSJ Tax_Id=164757 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium sp.] Length = 64 Score = 52.8 bits (125), Expect = 1e-05 Identities = 31/64 (48%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKLA+ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGEDDDLSGGAGAGQERREKLAEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q73YW7|PUP_MYCPA Tax_Id=1770 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium paratuberculosis] Length = 64 Score = 52.8 bits (125), Expect = 1e-05 Identities = 31/64 (48%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKLA+ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGDDEDDFASSTAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|B1MAI1|PUP_MYCA9 Tax_Id=561007 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium abscessus] Length = 64 Score = 52.8 bits (125), Expect = 1e-05 Identities = 31/64 (48%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKLA+ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGDDDDVTDLGGPAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A0QFB4|PUP_MYCA1 Tax_Id=243243 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium avium] Length = 64 Score = 52.8 bits (125), Expect = 1e-05 Identities = 31/64 (48%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKLA+ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGDDEDDFASSTAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q53078|PUP1_RHOER Tax_Id=1833 (pup1)RecName: Full=Prokaryotic ubiquitin-like protein pup 1; AltName: Full=Bacterial ubiquitin-like modifier 1;[Rhodococcus erythropolis] Length = 64 Score = 52.8 bits (125), Expect = 1e-05 Identities = 31/64 (48%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKLA+ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRTGGGDEDDTPGGDGAAGQERREKLAEDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A0PQT4|PUP_MYCUA Tax_Id=362242 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium ulcerans] Length = 64 Score = 52.4 bits (124), Expect = 2e-05 Identities = 31/64 (48%), Positives = 32/64 (50%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERR+KLAQ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDEDVTGTTAAGQERRKKLAQDTDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|O33246|PUP_MYCTU Tax_Id=1773 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium tuberculosis] Length = 64 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A5U4D7|PUP_MYCTA Tax_Id=419947 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium tuberculosis] Length = 64 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A0QZ48|PUP_MYCS2 Tax_Id=246196 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium smegmatis] Length = 64 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGEDDDLPGASAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A4TB63|PUP_MYCGI Tax_Id=350054 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium gilvum] Length = 64 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGEDDDPTGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|C1AQ27|PUP_MYCBT Tax_Id=561275 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium bovis] Length = 64 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|A1KKF4|PUP_MYCBP Tax_Id=410289 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium bovis] Length = 64 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q7TZ12|PUP_MYCBO Tax_Id=1765 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium bovis] Length = 64 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|C6DPV0|C6DPV0_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 71 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 8 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 67 Query: 61 KGGQ 64 KGGQ Sbjct: 68 KGGQ 71 >tr|A5WP85|A5WP85_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 64 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|A4KIP2|A4KIP2_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 71 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 8 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 67 Query: 61 KGGQ 64 KGGQ Sbjct: 68 KGGQ 71 >tr|A2VJK9|A2VJK9_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 71 Score = 51.2 bits (121), Expect = 4e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL + NAEDFVRAYVQ Sbjct: 8 MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 67 Query: 61 KGGQ 64 KGGQ Sbjct: 68 KGGQ 71 >sp|A1TAP5|PUP_MYCVP Tax_Id=350058 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium vanbaalenii] Length = 64 Score = 50.4 bits (119), Expect = 6e-05 Identities = 30/64 (46%), Positives = 30/64 (46%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGGGEDDDLTGSTAAGQERREKLTDETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|C0ZZU8|PUP_RHOE4 Tax_Id=234621 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Rhodococcus erythropolis] Length = 64 Score = 50.1 bits (118), Expect = 8e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQT+R QERREKLA NAEDFVRAYVQ Sbjct: 1 MAQEQTQRAGGGEDDETTGGDGSAGQERREKLAAETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >sp|Q53082|PUP2_RHOER Tax_Id=1833 (pup2)RecName: Full=Prokaryotic ubiquitin-like protein pup 2; AltName: Full=Bacterial ubiquitin-like modifier 2;[Rhodococcus erythropolis] Length = 64 Score = 50.1 bits (118), Expect = 8e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQT+R QERREKLA NAEDFVRAYVQ Sbjct: 1 MAQEQTQRAGGGEDDETTGGDGSAGQERREKLAAETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|C3JTB8|C3JTB8_RHOER Tax_Id=596309 SubName: Full=Ubiquitin analog Pup;[Rhodococcus erythropolis SK121] Length = 64 Score = 50.1 bits (118), Expect = 8e-05 Identities = 30/64 (46%), Positives = 31/64 (48%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQT+R QERREKLA NAEDFVRAYVQ Sbjct: 1 MAQEQTQRAGGGEDDETTGGDGSAGQERREKLAAETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|D0LDT0|D0LDT0_GORB4 Tax_Id=526226 SubName: Full=Putative uncharacterized protein;[Gordonia bronchialis] Length = 63 Score = 47.4 bits (111), Expect = 5e-04 Identities = 30/64 (46%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQTKR QERREKL++ NAEDFVRAYVQ Sbjct: 1 MAQEQTKRGGGDDDGDLGPEGGAG-QERREKLSEDTDDLLDEIDDVLEENAEDFVRAYVQ 59 Query: 61 KGGQ 64 KGGQ Sbjct: 60 KGGQ 63 >tr|C8XAQ5|C8XAQ5_NAKMY Tax_Id=479431 SubName: Full=Putative uncharacterized protein;[Nakamurella multipartita] Length = 64 Score = 46.6 bits (109), Expect = 0.001 Identities = 28/64 (43%), Positives = 30/64 (46%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQE+T R QERREKLA NAEDFVR+YVQ Sbjct: 1 MAQERTTRQGGGDGDDDAAGADAAGQERREKLAAETDDILDEIDDVLESNAEDFVRSYVQ 60 Query: 61 KGGQ 64 KGGQ Sbjct: 61 KGGQ 64 >tr|C6WID7|C6WID7_ACTMD Tax_Id=446462 SubName: Full=Putative uncharacterized protein;[Actinosynnema mirum] Length = 64 Score = 46.6 bits (109), Expect = 0.001 Identities = 27/64 (42%), Positives = 30/64 (46%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQ +R QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQVQRQGGGDGDDGGDAAAAAGQERREKLGEDVDAILDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGG+ Sbjct: 61 KGGE 64 >sp|Q9ZBE0|PUP_MYCLE Tax_Id=1769 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium leprae] Length = 63 Score = 45.8 bits (107), Expect = 0.002 Identities = 29/64 (45%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQT+R QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQTRRGGGGDDDEFTSSTSVG-QERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 59 Query: 61 KGGQ 64 KGGQ Sbjct: 60 KGGQ 63 >sp|B8ZRF2|PUP_MYCLB Tax_Id=561304 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Mycobacterium leprae] Length = 63 Score = 45.8 bits (107), Expect = 0.002 Identities = 29/64 (45%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQT+R QERREKL + NAEDFVRAYVQ Sbjct: 1 MAQEQTRRGGGGDDDEFTSSTSVG-QERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQ 59 Query: 61 KGGQ 64 KGGQ Sbjct: 60 KGGQ 63 >tr|C2AQ84|C2AQ84_TSUPA Tax_Id=521096 SubName: Full=Putative uncharacterized protein;[Tsukamurella paurometabola DSM 20162] Length = 64 Score = 45.1 bits (105), Expect = 0.003 Identities = 27/64 (42%), Positives = 28/64 (43%) Query: 1 MAQEQTKRXXXXXXXXXXXXXXXXXQERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQ 60 MAQEQ KR QER EKL NAEDFVRAYVQ Sbjct: 1 MAQEQVKRGGGGDEDDATGAPSGAGQERMEKLTDETDDLLDEIDDVLEENAEDFVRAYVQ 60 Query: 61 KGGQ 64 KGG+ Sbjct: 61 KGGE 64 >sp|A4FBY0|PUP1_SACEN Tax_Id=405948 (pup1)RecName: Full=Prokaryotic ubiquitin-like protein pup 1; AltName: Full=Bacterial ubiquitin-like modifier 1;[Saccharopolyspora erythraea] Length = 63 Score = 42.7 bits (99), Expect = 0.013 Identities = 22/39 (56%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 QERREKL + NAEDFVRAYVQKGGQ Sbjct: 25 QERREKLGEDVDAILDEIDDVLEENAEDFVRAYVQKGGQ 63 >tr|C7MWV8|C7MWV8_SACVD Tax_Id=471857 SubName: Full=Putative uncharacterized protein;[Saccharomonospora viridis] Length = 63 Score = 40.4 bits (93), Expect = 0.065 Identities = 20/39 (51%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 QERREK+ + NAEDFVRAYVQKGG+ Sbjct: 25 QERREKVGEDVDTILDEIDDVLEENAEDFVRAYVQKGGE 63 >tr|C4ER31|C4ER31_STRRS Tax_Id=479432 SubName: Full=Putative uncharacterized protein;[Streptosporangium roseum DSM 43021] Length = 69 Score = 37.7 bits (86), Expect = 0.42 Identities = 19/39 (48%), Positives = 22/39 (56%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 QER EKL+ NAE+FVR+YVQKGGQ Sbjct: 31 QERNEKLSDDVDAILDEIDEVLEENAEEFVRSYVQKGGQ 69 >tr|C7PVV1|C7PVV1_CATAD Tax_Id=479433 SubName: Full=Putative uncharacterized protein;[Catenulispora acidiphila] Length = 69 Score = 37.4 bits (85), Expect = 0.55 Identities = 18/39 (46%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 QER+EKL++ N+EDFVR +VQKGGQ Sbjct: 31 QERQEKLSEDVDSMLDEIDEVLEANSEDFVRGFVQKGGQ 69 >sp|A0LU49|PUP_ACIC1 Tax_Id=351607 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Acidothermus cellulolyticus] Length = 71 Score = 36.6 bits (83), Expect = 0.94 Identities = 18/39 (46%), Positives = 22/39 (56%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 QERREKL NAE+FVR+Y+QKGG+ Sbjct: 33 QERREKLDADVDAILDEIDDVLEENAEEFVRSYIQKGGE 71 >sp|B1W305|PUP_STRGG Tax_Id=455632 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Streptomyces griseus subsp. griseus] Length = 72 Score = 36.2 bits (82), Expect = 1.2 Identities = 18/38 (47%), Positives = 22/38 (57%) Query: 27 ERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 ER+EKL+ NAEDFVR++VQKGGQ Sbjct: 35 ERQEKLSDDVDSVLDEIDDVLEENAEDFVRSFVQKGGQ 72 >tr|D1A2S7|D1A2S7_THECU Tax_Id=471852 SubName: Full=Putative uncharacterized protein;[Thermomonospora curvata DSM 43183] Length = 69 Score = 36.2 bits (82), Expect = 1.2 Identities = 18/38 (47%), Positives = 21/38 (55%) Query: 27 ERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 ER +KL+ NAEDFVR+YVQKGGQ Sbjct: 32 ERHQKLSDDVDAILDEIDEVLEENAEDFVRSYVQKGGQ 69 >sp|Q7AKQ4|PUP_STRCO Tax_Id=1902 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Streptomyces coelicolor] Length = 72 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER+EKL+ NAEDFVR++VQKGG+ Sbjct: 34 KERQEKLSDDVDSVLDEIDDVLEENAEDFVRSFVQKGGE 72 >sp|Q828J0|PUP_STRAW Tax_Id=33903 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Streptomyces avermitilis] Length = 72 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER+EKL+ NAEDFVR++VQKGG+ Sbjct: 34 KERQEKLSDDVDSVLDEIDDVLEENAEDFVRSFVQKGGE 72 >sp|A8LH55|PUP_FRASN Tax_Id=298653 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Frankia sp.] Length = 72 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER EKL++ NAE+FV+ YVQKGGQ Sbjct: 34 KERHEKLSEDVDSLLDEIDDVLEENAEEFVKGYVQKGGQ 72 >sp|Q2J9Q2|PUP_FRASC Tax_Id=106370 (pup)RecName: Full=Prokaryotic ubiquitin-like protein pup; AltName: Full=Bacterial ubiquitin-like modifier;[Frankia sp.] Length = 72 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 22/39 (56%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER EKL++ NAE+FV+ YVQKGGQ Sbjct: 34 KERHEKLSEDVDSLLDEIDDVLEENAEEFVKGYVQKGGQ 72 >tr|C9Z4C9|C9Z4C9_STRSW Tax_Id=680198 SubName: Full=Putative uncharacterized protein;[Streptomyces scabies] Length = 74 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER+EKL+ NAEDFVR++VQKGG+ Sbjct: 36 KERQEKLSDDVDSVLDEIDDVLEENAEDFVRSFVQKGGE 74 >tr|C9NDY1|C9NDY1_9ACTO Tax_Id=591167 SubName: Full=Putative uncharacterized protein;[Streptomyces flavogriseus ATCC 33331] Length = 72 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER+EKL+ NAEDFVR++VQKGG+ Sbjct: 34 KERQEKLSDDVDDVLDEIDDVLESNAEDFVRSFVQKGGE 72 >tr|B5I543|B5I543_9ACTO Tax_Id=463191 SubName: Full=Putative uncharacterized protein;[Streptomyces sviceus ATCC 29083] Length = 72 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER+EKL+ NAEDFVR++VQKGG+ Sbjct: 34 KERQEKLSDDVDSVLDEIDDVLEENAEDFVRSFVQKGGE 72 >tr|B5H8K7|B5H8K7_STRPR Tax_Id=457429 SubName: Full=Predicted protein;[Streptomyces pristinaespiralis ATCC 25486] Length = 75 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER+EKL+ NAEDFVR++VQKGG+ Sbjct: 37 KERQEKLSDDVDSVLDEIDDVLEENAEDFVRSFVQKGGE 75 >tr|B5H180|B5H180_STRCL Tax_Id=443255 SubName: Full=Putative uncharacterized protein;[Streptomyces clavuligerus ATCC 27064] Length = 72 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER+EKL+ NAEDFVR++VQKGG+ Sbjct: 34 KERQEKLSDDVESVLDEIDDVLEENAEDFVRSFVQKGGE 72 >tr|B5GEC8|B5GEC8_9ACTO Tax_Id=465543 SubName: Full=Predicted protein;[Streptomyces sp. SPB74] Length = 72 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER+EKL+ NAEDFVR++VQKGG+ Sbjct: 34 KERQEKLSDDVDSVLDEIDDVLEENAEDFVRSFVQKGGE 72 >tr|B4VAB0|B4VAB0_9ACTO Tax_Id=465541 SubName: Full=Putative uncharacterized protein;[Streptomyces sp. Mg1] Length = 81 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/39 (43%), Positives = 23/39 (58%) Query: 26 QERREKLAQXXXXXXXXXXXXXXXNAEDFVRAYVQKGGQ 64 +ER+EKL+ NAEDFVR++VQKGG+ Sbjct: 43 KERQEKLSDDVDSVLDEIDDVLEENAEDFVRSFVQKGGE 81 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.311 0.123 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 167,692,770 Number of extensions: 1732631 Number of successful extensions: 292 Number of sequences better than 10.0: 54 Number of HSP's gapped: 292 Number of HSP's successfully gapped: 54 Length of query: 64 Length of database: 3,846,993,858 Length adjustment: 36 Effective length of query: 28 Effective length of database: 3,441,086,550 Effective search space: 96350423400 Effective search space used: 96350423400 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 75 (33.5 bits)