BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_3235 (674 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HGV9|B2HGV9_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 1184 0.0 tr|A2VJT2|A2VJT2_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 872 0.0 tr|A0QF17|A0QF17_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras... 869 0.0 sp|Q10384|Y2191_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 868 0.0 tr|C6DPL7|C6DPL7_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 868 0.0 tr|A5U4L9|A5U4L9_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 868 0.0 tr|A5WPG1|A5WPG1_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 868 0.0 tr|Q73YM5|Q73YM5_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 868 0.0 tr|Q7TYX5|Q7TYX5_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 867 0.0 tr|C1AQA6|C1AQA6_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 867 0.0 tr|A1KKN3|A1KKN3_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 867 0.0 tr|A3Q1Q1|A3Q1Q1_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras... 765 0.0 tr|Q1B6T8|Q1B6T8_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras... 763 0.0 tr|A1UI87|A1UI87_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras... 763 0.0 tr|A4TBH6|A4TBH6_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras... 747 0.0 tr|A0R047|A0R047_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras... 733 0.0 tr|B1MP02|B1MP02_MYCA9 Tax_Id=561007 SubName: Full=Probable DNA ... 617 e-174 tr|C1A114|C1A114_RHOE4 Tax_Id=234621 (dnaQ)SubName: Full=Putativ... 608 e-172 tr|C3JJ89|C3JJ89_RHOER Tax_Id=596309 SubName: Full=DNA polymeras... 605 e-171 tr|Q5YZ23|Q5YZ23_NOCFA Tax_Id=37329 SubName: Full=Putative DNA p... 590 e-166 tr|Q0SHN3|Q0SHN3_RHOSR Tax_Id=101510 SubName: Full=DNA-directed ... 581 e-163 tr|C1AU93|C1AU93_RHOOB Tax_Id=632772 (dnaQ)SubName: Full=Putativ... 571 e-160 tr|C2ATW2|C2ATW2_TSUPA Tax_Id=521096 SubName: Full=Exonuclease, ... 543 e-152 tr|C7MZ07|C7MZ07_SACVD Tax_Id=471857 SubName: Full=Exonuclease, ... 540 e-151 tr|C6W9G7|C6W9G7_ACTMD Tax_Id=446462 SubName: Full=DNA polymeras... 536 e-150 tr|D0LAW5|D0LAW5_GORB4 Tax_Id=526226 SubName: Full=DNA polymeras... 529 e-148 tr|A4FAD3|A4FAD3_SACEN Tax_Id=405948 SubName: Full=DNA polymeras... 528 e-148 tr|C8XCX1|C8XCX1_NAKMY Tax_Id=479431 SubName: Full=DNA polymeras... 494 e-137 tr|D1A8X2|D1A8X2_THECU Tax_Id=471852 SubName: Full=DNA polymeras... 454 e-125 tr|Q0RFJ5|Q0RFJ5_FRAAA Tax_Id=326424 SubName: Full=Putative DNA-... 444 e-122 tr|C1RG85|C1RG85_9CELL Tax_Id=446466 SubName: Full=Exonuclease, ... 432 e-119 tr|C0U9G6|C0U9G6_9ACTO Tax_Id=526225 SubName: Full=Exonuclease, ... 429 e-118 tr|A4X9Y0|A4X9Y0_SALTO Tax_Id=369723 SubName: Full=DNA polymeras... 427 e-117 tr|A3TK98|A3TK98_9MICO Tax_Id=313589 SubName: Full=Putative unch... 427 e-117 tr|A8LYB2|A8LYB2_SALAI Tax_Id=391037 SubName: Full=DNA polymeras... 426 e-117 tr|C4RLP2|C4RLP2_9ACTO Tax_Id=219305 SubName: Full=Putative unch... 424 e-116 tr|C4EAR2|C4EAR2_STRRS Tax_Id=479432 SubName: Full=Exonuclease, ... 418 e-114 tr|Q2J8D1|Q2J8D1_FRASC Tax_Id=106370 SubName: Full=DNA polymeras... 417 e-114 tr|A8LFE8|A8LFE8_FRASN Tax_Id=298653 SubName: Full=DNA polymeras... 414 e-113 tr|A0LTI1|A0LTI1_ACIC1 Tax_Id=351607 SubName: Full=DNA polymeras... 412 e-113 tr|D1BTP4|D1BTP4_9MICO Tax_Id=446471 SubName: Full=DNA polymeras... 412 e-113 tr|C5C5G5|C5C5G5_BEUC1 Tax_Id=471853 SubName: Full=DNA polymeras... 407 e-111 tr|C1WZE5|C1WZE5_9ACTO Tax_Id=479435 SubName: Full=Exonuclease, ... 404 e-110 tr|D1BFZ9|D1BFZ9_9MICO Tax_Id=446469 SubName: Full=Exonuclease, ... 403 e-110 tr|A6WD22|A6WD22_KINRD Tax_Id=266940 SubName: Full=DNA polymeras... 401 e-109 tr|C4DEN5|C4DEN5_9ACTO Tax_Id=446470 SubName: Full=Exonuclease, ... 401 e-109 tr|A1SLE5|A1SLE5_NOCSJ Tax_Id=196162 SubName: Full=DNA polymeras... 400 e-109 tr|C7NIC3|C7NIC3_KYTSD Tax_Id=478801 SubName: Full=Exonuclease, ... 396 e-108 tr|Q6A9T9|Q6A9T9_PROAC Tax_Id=1747 SubName: Full=DNA polymerase ... 379 e-103 tr|C1YUT4|C1YUT4_NOCDA Tax_Id=446468 SubName: Full=Exonuclease, ... 353 4e-95 >tr|B2HGV9|B2HGV9_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 674 Score = 1184 bits (3063), Expect = 0.0 Identities = 609/674 (90%), Positives = 609/674 (90%) Query: 1 MSVRVPNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVV 60 MSVRVPNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVV Sbjct: 1 MSVRVPNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVV 60 Query: 61 DLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTA 120 DL SPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTA Sbjct: 61 DLETTGGRATGTEASPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTA 120 Query: 121 MLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLAR 180 MLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLAR Sbjct: 121 MLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLAR 180 Query: 181 RVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELR 240 RVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELR Sbjct: 181 RVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELR 240 Query: 241 AYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRG 300 AYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRG Sbjct: 241 AYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRG 300 Query: 301 RMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPR 360 RMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPR Sbjct: 301 RMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPR 360 Query: 361 LSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSAC 420 LSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSAC Sbjct: 361 LSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSAC 420 Query: 421 PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAV 480 PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAV Sbjct: 421 PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAV 480 Query: 481 EVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHA 540 EVLWRGQ DGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHA Sbjct: 481 EVLWRGQRLRALVALPELVAAAPDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHA 540 Query: 541 GAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXXXXX 600 GAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSP Sbjct: 541 GAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPLRSAG 600 Query: 601 XXXXXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHRGAL 660 EQV VLAEPHPSREQLLGRTAVDSHRGAL Sbjct: 601 PWAAWAAAARSARLAAEQVSQGDPRGRPDGGRQSDVLAEPHPSREQLLGRTAVDSHRGAL 660 Query: 661 QPVLPGGEPFSAAG 674 QPVLPGGEPFSAAG Sbjct: 661 QPVLPGGEPFSAAG 674 >tr|A2VJT2|A2VJT2_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 647 Score = 872 bits (2254), Expect = 0.0 Identities = 465/676 (68%), Positives = 510/676 (75%), Gaps = 31/676 (4%) Query: 1 MSVRVPNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVV 60 MSV+ PNV AMGATGGTQLS FAD+A A AD++SLRETTFVVV Sbjct: 1 MSVQGPNVAAMGATGGTQLS--------FADLA----HAQGAAWTPADEMSLRETTFVVV 48 Query: 61 DLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTA 120 DL +PPDAITEIGAVKV GG +LGEFATLV+PQ SIPPQIVRLTGITTA Sbjct: 49 DLETTGGRTTGNDATPPDAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTA 108 Query: 121 MLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLAR 180 M+ +APTID+VLPMFFEF G+SVLVAHNAGFDIGFLRAAA RCDI WP +VLCT+RLAR Sbjct: 109 MVGNAPTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLAR 168 Query: 181 RVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELR 240 RVLSR+EAPSVRLAALARLF+VA+ PTHRALDDARATV+VLHALIERVGNQGVH+YAELR Sbjct: 169 RVLSRDEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELR 228 Query: 241 AYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRG 300 +YLP VT AQR KRVLA+ LPHRPG+YLFRGPSGEVLYVGTA DLRRRVSQYFNG D R Sbjct: 229 SYLPNVTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRK 288 Query: 301 RMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPR 360 RM EMV LA ++DHVECAH LEAGVRELRML+ HAPPYNRRS+FP+RWWWV LTDEAFPR Sbjct: 289 RMTEMVMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPR 348 Query: 361 LSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSAC 420 LSV+RAPRHDRVVGPFRSR+ A ETAALLAR TG+RTCT RL RSA HGPACPELEVSAC Sbjct: 349 LSVIRAPRHDRVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSAC 408 Query: 421 PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAV 480 PA R+VTA YA+A RAA LI G+DN AL AAV QV++LAER RYESAARLRDH+ATA+ Sbjct: 409 PAARDVTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAI 468 Query: 481 EVLWRGQXXXXXXXXXXXXXXXXDGC--GGYQFAVIRHGQLAAAGNSRRGTPPMPVVDAL 538 E LW GQ DG GGYQ AVIRHGQLAAAG + RG PPMPVVDA+ Sbjct: 469 EALWHGQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAI 528 Query: 539 HAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXXX 598 GAQ ILP PAPLGGALVEE ALIARWLA PGVRIV V+ ++AG SP Sbjct: 529 RRGAQAILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSN--------DAAGLASPVRS 580 Query: 599 XXXXXXXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHRG 658 EQ+ + EPHPSREQL GRT VD G Sbjct: 581 AGPWAAWAATARSAQLAGEQL---------SRGWQSDLPTEPHPSREQLFGRTGVDCRTG 631 Query: 659 ALQPVLPGGEPFSAAG 674 QP+LPG +PFS AG Sbjct: 632 PPQPLLPGRQPFSTAG 647 >tr|A0QF17|A0QF17_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase III, epsilon subunit;[Mycobacterium avium] Length = 643 Score = 869 bits (2245), Expect = 0.0 Identities = 458/677 (67%), Positives = 506/677 (74%), Gaps = 37/677 (5%) Query: 1 MSVRVPNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVV 60 MSV +P VT + + G TQLS FAD+ A ++V+LR+TTFVVV Sbjct: 1 MSVVLPTVTTVASDGATQLS--------FADVG---------PAFGPEEVALRDTTFVVV 43 Query: 61 DLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTA 120 DL + PDAITEIGAVKVR GV+LGEFATLVDPQRSIPPQI+RLTGITTA Sbjct: 44 DLETTGGRSTSTGETAPDAITEIGAVKVRDGVVLGEFATLVDPQRSIPPQIMRLTGITTA 103 Query: 121 MLCDAPTIDSVLPMFFEFVG---NSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVR 177 M+ DAP ID+VLPMF EF G +VLVAHNAGFD+GFLRAAA +CDIAWP +VLCTVR Sbjct: 104 MVSDAPAIDAVLPMFLEFAGLDRGAVLVAHNAGFDVGFLRAAAQQCDIAWPRPRVLCTVR 163 Query: 178 LARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYA 237 LARRVLSREEAPSVRLA+LARLF+V TQPTHRALDDARATV+VLHALIERVGNQGVH+YA Sbjct: 164 LARRVLSREEAPSVRLASLARLFAVTTQPTHRALDDARATVDVLHALIERVGNQGVHTYA 223 Query: 238 ELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGAD 297 +LR YLP VTPAQRRKRVLA+GLP RPG+YLFRGPSGEVLY+GTAVDLRRRV+QYF GAD Sbjct: 224 DLRGYLPDVTPAQRRKRVLAEGLPRRPGVYLFRGPSGEVLYIGTAVDLRRRVAQYFTGAD 283 Query: 298 SRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEA 357 RGRMKEMVALAGAVDHVECAHALEAGVRELR+LAAHAPPYNRRSRFP RWWWV LTDEA Sbjct: 284 PRGRMKEMVALAGAVDHVECAHALEAGVRELRLLAAHAPPYNRRSRFPQRWWWVALTDEA 343 Query: 358 FPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEV 417 FPRL+VVRAPRHDR VGPFR+R DA +TA LLARF G+RTCT RL R+ALHGP CPE EV Sbjct: 344 FPRLAVVRAPRHDRAVGPFRARADAADTAELLARFAGLRTCTNRLGRAALHGPLCPEAEV 403 Query: 418 SACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIA 477 + CPA R VTA YA A R A LI+G DN+AL AAV QV+ LAER +ESAARLRD A Sbjct: 404 APCPAARGVTATQYAAAVARVAALIDGADNSALAAAVDQVAALAERRHFESAARLRDRTA 463 Query: 478 TAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDA 537 TAVEVLWRGQ DG GGYQ AV+R+G+LAAAGN+RRG PPMPVVDA Sbjct: 464 TAVEVLWRGQRLRVLASLPELVAAAPDGQGGYQLAVVRYGRLAAAGNARRGVPPMPVVDA 523 Query: 538 LHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXX 597 + A AQ I P P PLGGALVEETALIARWL PGVRIVRV GT+ ++AGW SP Sbjct: 524 ITAAAQAIWPEPGPLGGALVEETALIARWLEAPGVRIVRVEGTQ------DAAGWASPLR 577 Query: 598 XXXXXXXXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHR 657 EQ +L EPHP+REQL GR VD Sbjct: 578 SAGAWAAWAAAARSARLASEQA-----------LRASELLTEPHPTREQLFGRAGVDGGT 626 Query: 658 GALQPVLPGGEPFSAAG 674 GA QPVLPG +PF AAG Sbjct: 627 GAGQPVLPGRQPFGAAG 643 >sp|Q10384|Y2191_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized protein Rv2191/MT2247;[Mycobacterium tuberculosis] Length = 645 Score = 868 bits (2243), Expect = 0.0 Identities = 462/671 (68%), Positives = 506/671 (75%), Gaps = 31/671 (4%) Query: 6 PNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVVDLXXX 65 PNV AMGATGGTQLS FAD+A A AD++SLRETTFVVVDL Sbjct: 4 PNVAAMGATGGTQLS--------FADLA----HAQGAAWTPADEMSLRETTFVVVDLETT 51 Query: 66 XXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDA 125 +PPDAITEIGAVKV GG +LGEFATLV+PQ SIPPQIVRLTGITTAM+ +A Sbjct: 52 GGRTTGNDATPPDAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNA 111 Query: 126 PTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSR 185 PTID+VLPMFFEF G+SVLVAHNAGFDIGFLRAAA RCDI WP +VLCT+RLARRVLSR Sbjct: 112 PTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSR 171 Query: 186 EEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPG 245 +EAPSVRLAALARLF+VA+ PTHRALDDARATV+VLHALIERVGNQGVH+YAELR+YLP Sbjct: 172 DEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPN 231 Query: 246 VTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEM 305 VT AQR KRVLA+ LPHRPG+YLFRGPSGEVLYVGTA DLRRRVSQYFNG D R RM EM Sbjct: 232 VTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEM 291 Query: 306 VALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVR 365 V LA ++DHVECAH LEAGVRELRML+ HAPPYNRRS+FP+RWWWV LTDEAFPRLSV+R Sbjct: 292 VMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIR 351 Query: 366 APRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSACPATRN 425 APRHDRVVGPFRSR+ A ETAALLAR TG+RTCT RL RSA HGPACPELEVSACPA R+ Sbjct: 352 APRHDRVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARD 411 Query: 426 VTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWR 485 VTA YA+A RAA LI G+DN AL AAV QV++LAER RYESAARLRDH+ATA+E LW Sbjct: 412 VTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWH 471 Query: 486 GQXXXXXXXXXXXXXXXXDGC--GGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQ 543 GQ DG GGYQ AVIRHGQLAAAG + RG PPMPVVDA+ GAQ Sbjct: 472 GQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQ 531 Query: 544 TILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXXXXXXXX 603 ILP PAPLGGALVEE ALIARWLA PGVRIV V+ ++AG SP Sbjct: 532 AILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSN--------DAAGLASPVRSAGPWA 583 Query: 604 XXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHRGALQPV 663 EQ+ + EPHPSREQL GRT VD G QP+ Sbjct: 584 AWAATARSAQLAGEQL---------SRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPL 634 Query: 664 LPGGEPFSAAG 674 LPG +PFS AG Sbjct: 635 LPGRQPFSTAG 645 >tr|C6DPL7|C6DPL7_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 645 Score = 868 bits (2243), Expect = 0.0 Identities = 462/671 (68%), Positives = 506/671 (75%), Gaps = 31/671 (4%) Query: 6 PNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVVDLXXX 65 PNV AMGATGGTQLS FAD+A A AD++SLRETTFVVVDL Sbjct: 4 PNVAAMGATGGTQLS--------FADLA----HAQGAAWTPADEMSLRETTFVVVDLETT 51 Query: 66 XXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDA 125 +PPDAITEIGAVKV GG +LGEFATLV+PQ SIPPQIVRLTGITTAM+ +A Sbjct: 52 GGRTTGNDATPPDAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNA 111 Query: 126 PTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSR 185 PTID+VLPMFFEF G+SVLVAHNAGFDIGFLRAAA RCDI WP +VLCT+RLARRVLSR Sbjct: 112 PTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSR 171 Query: 186 EEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPG 245 +EAPSVRLAALARLF+VA+ PTHRALDDARATV+VLHALIERVGNQGVH+YAELR+YLP Sbjct: 172 DEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPN 231 Query: 246 VTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEM 305 VT AQR KRVLA+ LPHRPG+YLFRGPSGEVLYVGTA DLRRRVSQYFNG D R RM EM Sbjct: 232 VTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEM 291 Query: 306 VALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVR 365 V LA ++DHVECAH LEAGVRELRML+ HAPPYNRRS+FP+RWWWV LTDEAFPRLSV+R Sbjct: 292 VMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIR 351 Query: 366 APRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSACPATRN 425 APRHDRVVGPFRSR+ A ETAALLAR TG+RTCT RL RSA HGPACPELEVSACPA R+ Sbjct: 352 APRHDRVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARD 411 Query: 426 VTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWR 485 VTA YA+A RAA LI G+DN AL AAV QV++LAER RYESAARLRDH+ATA+E LW Sbjct: 412 VTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWH 471 Query: 486 GQXXXXXXXXXXXXXXXXDGC--GGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQ 543 GQ DG GGYQ AVIRHGQLAAAG + RG PPMPVVDA+ GAQ Sbjct: 472 GQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQ 531 Query: 544 TILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXXXXXXXX 603 ILP PAPLGGALVEE ALIARWLA PGVRIV V+ ++AG SP Sbjct: 532 AILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSN--------DAAGLASPVRSAGPWA 583 Query: 604 XXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHRGALQPV 663 EQ+ + EPHPSREQL GRT VD G QP+ Sbjct: 584 AWAATARSAQLAGEQL---------SRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPL 634 Query: 664 LPGGEPFSAAG 674 LPG +PFS AG Sbjct: 635 LPGRQPFSTAG 645 >tr|A5U4L9|A5U4L9_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 645 Score = 868 bits (2243), Expect = 0.0 Identities = 462/671 (68%), Positives = 506/671 (75%), Gaps = 31/671 (4%) Query: 6 PNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVVDLXXX 65 PNV AMGATGGTQLS FAD+A A AD++SLRETTFVVVDL Sbjct: 4 PNVAAMGATGGTQLS--------FADLA----HAQGAAWTPADEMSLRETTFVVVDLETT 51 Query: 66 XXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDA 125 +PPDAITEIGAVKV GG +LGEFATLV+PQ SIPPQIVRLTGITTAM+ +A Sbjct: 52 GGRTTGNDATPPDAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNA 111 Query: 126 PTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSR 185 PTID+VLPMFFEF G+SVLVAHNAGFDIGFLRAAA RCDI WP +VLCT+RLARRVLSR Sbjct: 112 PTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSR 171 Query: 186 EEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPG 245 +EAPSVRLAALARLF+VA+ PTHRALDDARATV+VLHALIERVGNQGVH+YAELR+YLP Sbjct: 172 DEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPN 231 Query: 246 VTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEM 305 VT AQR KRVLA+ LPHRPG+YLFRGPSGEVLYVGTA DLRRRVSQYFNG D R RM EM Sbjct: 232 VTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEM 291 Query: 306 VALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVR 365 V LA ++DHVECAH LEAGVRELRML+ HAPPYNRRS+FP+RWWWV LTDEAFPRLSV+R Sbjct: 292 VMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIR 351 Query: 366 APRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSACPATRN 425 APRHDRVVGPFRSR+ A ETAALLAR TG+RTCT RL RSA HGPACPELEVSACPA R+ Sbjct: 352 APRHDRVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARD 411 Query: 426 VTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWR 485 VTA YA+A RAA LI G+DN AL AAV QV++LAER RYESAARLRDH+ATA+E LW Sbjct: 412 VTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWH 471 Query: 486 GQXXXXXXXXXXXXXXXXDGC--GGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQ 543 GQ DG GGYQ AVIRHGQLAAAG + RG PPMPVVDA+ GAQ Sbjct: 472 GQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQ 531 Query: 544 TILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXXXXXXXX 603 ILP PAPLGGALVEE ALIARWLA PGVRIV V+ ++AG SP Sbjct: 532 AILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSN--------DAAGLASPVRSAGPWA 583 Query: 604 XXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHRGALQPV 663 EQ+ + EPHPSREQL GRT VD G QP+ Sbjct: 584 AWAATARSAQLAGEQL---------SRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPL 634 Query: 664 LPGGEPFSAAG 674 LPG +PFS AG Sbjct: 635 LPGRQPFSTAG 645 >tr|A5WPG1|A5WPG1_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 645 Score = 868 bits (2243), Expect = 0.0 Identities = 462/671 (68%), Positives = 506/671 (75%), Gaps = 31/671 (4%) Query: 6 PNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVVDLXXX 65 PNV AMGATGGTQLS FAD+A A AD++SLRETTFVVVDL Sbjct: 4 PNVAAMGATGGTQLS--------FADLA----HAQGAAWTPADEMSLRETTFVVVDLETT 51 Query: 66 XXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDA 125 +PPDAITEIGAVKV GG +LGEFATLV+PQ SIPPQIVRLTGITTAM+ +A Sbjct: 52 GGRTTGNDATPPDAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNA 111 Query: 126 PTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSR 185 PTID+VLPMFFEF G+SVLVAHNAGFDIGFLRAAA RCDI WP +VLCT+RLARRVLSR Sbjct: 112 PTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSR 171 Query: 186 EEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPG 245 +EAPSVRLAALARLF+VA+ PTHRALDDARATV+VLHALIERVGNQGVH+YAELR+YLP Sbjct: 172 DEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPN 231 Query: 246 VTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEM 305 VT AQR KRVLA+ LPHRPG+YLFRGPSGEVLYVGTA DLRRRVSQYFNG D R RM EM Sbjct: 232 VTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEM 291 Query: 306 VALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVR 365 V LA ++DHVECAH LEAGVRELRML+ HAPPYNRRS+FP+RWWWV LTDEAFPRLSV+R Sbjct: 292 VMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIR 351 Query: 366 APRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSACPATRN 425 APRHDRVVGPFRSR+ A ETAALLAR TG+RTCT RL RSA HGPACPELEVSACPA R+ Sbjct: 352 APRHDRVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARD 411 Query: 426 VTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWR 485 VTA YA+A RAA LI G+DN AL AAV QV++LAER RYESAARLRDH+ATA+E LW Sbjct: 412 VTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWH 471 Query: 486 GQXXXXXXXXXXXXXXXXDGC--GGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQ 543 GQ DG GGYQ AVIRHGQLAAAG + RG PPMPVVDA+ GAQ Sbjct: 472 GQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQ 531 Query: 544 TILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXXXXXXXX 603 ILP PAPLGGALVEE ALIARWLA PGVRIV V+ ++AG SP Sbjct: 532 AILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSN--------DAAGLASPVRSAGPWA 583 Query: 604 XXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHRGALQPV 663 EQ+ + EPHPSREQL GRT VD G QP+ Sbjct: 584 AWAATARSAQLAGEQL---------SRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPL 634 Query: 664 LPGGEPFSAAG 674 LPG +PFS AG Sbjct: 635 LPGRQPFSTAG 645 >tr|Q73YM5|Q73YM5_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 643 Score = 868 bits (2242), Expect = 0.0 Identities = 457/677 (67%), Positives = 504/677 (74%), Gaps = 37/677 (5%) Query: 1 MSVRVPNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVV 60 MSV +P VT + + G TQLS FAD+ A D+V+LR+TTFVVV Sbjct: 1 MSVVLPTVTTVASDGATQLS--------FADVG---------PAFGPDEVALRDTTFVVV 43 Query: 61 DLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTA 120 DL + PDAITEIGAVKVRGGV+LGEFATLVDPQRSIPPQI+RLTGITTA Sbjct: 44 DLETTGGRSTSTEETAPDAITEIGAVKVRGGVVLGEFATLVDPQRSIPPQIMRLTGITTA 103 Query: 121 MLCDAPTIDSVLPMFFEFVG---NSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVR 177 M+ DAP ID+VLPMF EF G +VLVAHNAGFD+GFLRAAA +CDIAWP +VLCTVR Sbjct: 104 MVSDAPAIDAVLPMFLEFAGLDRGAVLVAHNAGFDVGFLRAAAQQCDIAWPRPRVLCTVR 163 Query: 178 LARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYA 237 LARRVLSREEAPSVRLA+LARLF+V TQPTHRALDDARATV+VLHALIERVGNQGVH+YA Sbjct: 164 LARRVLSREEAPSVRLASLARLFAVTTQPTHRALDDARATVDVLHALIERVGNQGVHTYA 223 Query: 238 ELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGAD 297 +LR YLP VTP QRRKRVLA+GLP RPG+YLFRGPSGEVLY+GTAVDLRRRV+QYF GAD Sbjct: 224 DLRGYLPDVTPTQRRKRVLAEGLPRRPGVYLFRGPSGEVLYIGTAVDLRRRVAQYFTGAD 283 Query: 298 SRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEA 357 RGRMKEMVALAGAVDHVECAHALEAGVRELR+LAAHAPPYNRRSRFP RWWWV LTDEA Sbjct: 284 PRGRMKEMVALAGAVDHVECAHALEAGVRELRLLAAHAPPYNRRSRFPQRWWWVALTDEA 343 Query: 358 FPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEV 417 +PRL+VVRAPRHDR VGPFR+R DA +TA LLARF G+RTCT RL R+ALHGP CPE EV Sbjct: 344 YPRLAVVRAPRHDRAVGPFRARADAADTAELLARFAGLRTCTNRLGRAALHGPLCPEAEV 403 Query: 418 SACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIA 477 + CPA R VTA YA A R A LI+G DN+AL AAV QV+ LAER +ESAARLRD A Sbjct: 404 APCPAARGVTATQYAAAVARVAALIDGADNSALAAAVDQVAALAERRHFESAARLRDRTA 463 Query: 478 TAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDA 537 TAVE LWRGQ DG GGYQ AV+R+G+LAAAGN+RRG PPMPVVDA Sbjct: 464 TAVETLWRGQRLRALASLPELVAAAPDGQGGYQLAVVRYGRLAAAGNARRGVPPMPVVDA 523 Query: 538 LHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXX 597 + A AQ I P P PLGGALVEETALIARWL PGVRIVRV GT ++AGW SP Sbjct: 524 ITAAAQAIWPEPGPLGGALVEETALIARWLEAPGVRIVRVKGT------PDAAGWASPLR 577 Query: 598 XXXXXXXXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHR 657 EQ +L EPHP+REQL GR VD Sbjct: 578 SAGAWAAWAAAARSARLASEQA-----------LRASELLTEPHPTREQLFGRAGVDGGA 626 Query: 658 GALQPVLPGGEPFSAAG 674 GA QPVLPG +PF AAG Sbjct: 627 GAGQPVLPGRQPFGAAG 643 >tr|Q7TYX5|Q7TYX5_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb2214;[Mycobacterium bovis] Length = 645 Score = 867 bits (2239), Expect = 0.0 Identities = 461/671 (68%), Positives = 505/671 (75%), Gaps = 31/671 (4%) Query: 6 PNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVVDLXXX 65 PNV AMGATGGTQLS FAD+A A AD++SLRETTFVVVDL Sbjct: 4 PNVAAMGATGGTQLS--------FADLA----HAQGAAWTPADEMSLRETTFVVVDLETT 51 Query: 66 XXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDA 125 +PPDAITEIGAVKV GG +LGEFATLV+PQ SIPPQIVRLTGITTAM+ +A Sbjct: 52 GGRTTGNDATPPDAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNA 111 Query: 126 PTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSR 185 PTID+VLPMFFEF G+SVLVAHNAGFDIGFLRAAA RCDI WP +VLCT+RLARRVLSR Sbjct: 112 PTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSR 171 Query: 186 EEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPG 245 +EAPSVRLAALARLF+VA+ PTHRALDDARATV+VLHALIERVGNQGVH+YAELR+YLP Sbjct: 172 DEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPN 231 Query: 246 VTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEM 305 VT AQR KRVLA+ LPHRPG+YLFRGPSGEVLYVGTA DLRRRVSQYFNG D R RM EM Sbjct: 232 VTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEM 291 Query: 306 VALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVR 365 V LA ++DHVECAH LEAGVRELRML+ HAPPYNRRS+FP+RWWWV LTDEAFPRLSV+R Sbjct: 292 VMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIR 351 Query: 366 APRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSACPATRN 425 APRHDRVVGPFRSR+ A ET ALLAR TG+RTCT RL RSA HGPACPELEVSACPA R+ Sbjct: 352 APRHDRVVGPFRSRSKAAETTALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARD 411 Query: 426 VTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWR 485 VTA YA+A RAA LI G+DN AL AAV QV++LAER RYESAARLRDH+ATA+E LW Sbjct: 412 VTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWH 471 Query: 486 GQXXXXXXXXXXXXXXXXDGC--GGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQ 543 GQ DG GGYQ AVIRHGQLAAAG + RG PPMPVVDA+ GAQ Sbjct: 472 GQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQ 531 Query: 544 TILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXXXXXXXX 603 ILP PAPLGGALVEE ALIARWLA PGVRIV V+ ++AG SP Sbjct: 532 AILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSN--------DAAGLASPVRSAGPWA 583 Query: 604 XXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHRGALQPV 663 EQ+ + EPHPSREQL GRT VD G QP+ Sbjct: 584 AWAATARSAQLAGEQL---------SRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPL 634 Query: 664 LPGGEPFSAAG 674 LPG +PFS AG Sbjct: 635 LPGRQPFSTAG 645 >tr|C1AQA6|C1AQA6_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 645 Score = 867 bits (2239), Expect = 0.0 Identities = 461/671 (68%), Positives = 505/671 (75%), Gaps = 31/671 (4%) Query: 6 PNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVVDLXXX 65 PNV AMGATGGTQLS FAD+A A AD++SLRETTFVVVDL Sbjct: 4 PNVAAMGATGGTQLS--------FADLA----HAQGAAWTPADEMSLRETTFVVVDLETT 51 Query: 66 XXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDA 125 +PPDAITEIGAVKV GG +LGEFATLV+PQ SIPPQIVRLTGITTAM+ +A Sbjct: 52 GGRTTGNDATPPDAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNA 111 Query: 126 PTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSR 185 PTID+VLPMFFEF G+SVLVAHNAGFDIGFLRAAA RCDI WP +VLCT+RLARRVLSR Sbjct: 112 PTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSR 171 Query: 186 EEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPG 245 +EAPSVRLAALARLF+VA+ PTHRALDDARATV+VLHALIERVGNQGVH+YAELR+YLP Sbjct: 172 DEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPN 231 Query: 246 VTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEM 305 VT AQR KRVLA+ LPHRPG+YLFRGPSGEVLYVGTA DLRRRVSQYFNG D R RM EM Sbjct: 232 VTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEM 291 Query: 306 VALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVR 365 V LA ++DHVECAH LEAGVRELRML+ HAPPYNRRS+FP+RWWWV LTDEAFPRLSV+R Sbjct: 292 VMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIR 351 Query: 366 APRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSACPATRN 425 APRHDRVVGPFRSR+ A ET ALLAR TG+RTCT RL RSA HGPACPELEVSACPA R+ Sbjct: 352 APRHDRVVGPFRSRSKAAETTALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARD 411 Query: 426 VTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWR 485 VTA YA+A RAA LI G+DN AL AAV QV++LAER RYESAARLRDH+ATA+E LW Sbjct: 412 VTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWH 471 Query: 486 GQXXXXXXXXXXXXXXXXDGC--GGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQ 543 GQ DG GGYQ AVIRHGQLAAAG + RG PPMPVVDA+ GAQ Sbjct: 472 GQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQ 531 Query: 544 TILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXXXXXXXX 603 ILP PAPLGGALVEE ALIARWLA PGVRIV V+ ++AG SP Sbjct: 532 AILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSN--------DAAGLASPVRSAGPWA 583 Query: 604 XXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHRGALQPV 663 EQ+ + EPHPSREQL GRT VD G QP+ Sbjct: 584 AWAATARSAQLAGEQL---------SRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPL 634 Query: 664 LPGGEPFSAAG 674 LPG +PFS AG Sbjct: 635 LPGRQPFSTAG 645 >tr|A1KKN3|A1KKN3_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_2207;[Mycobacterium bovis] Length = 645 Score = 867 bits (2239), Expect = 0.0 Identities = 461/671 (68%), Positives = 505/671 (75%), Gaps = 31/671 (4%) Query: 6 PNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVVDLXXX 65 PNV AMGATGGTQLS FAD+A A AD++SLRETTFVVVDL Sbjct: 4 PNVAAMGATGGTQLS--------FADLA----HAQGAAWTPADEMSLRETTFVVVDLETT 51 Query: 66 XXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDA 125 +PPDAITEIGAVKV GG +LGEFATLV+PQ SIPPQIVRLTGITTAM+ +A Sbjct: 52 GGRTTGNDATPPDAITEIGAVKVCGGAVLGEFATLVNPQHSIPPQIVRLTGITTAMVGNA 111 Query: 126 PTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSR 185 PTID+VLPMFFEF G+SVLVAHNAGFDIGFLRAAA RCDI WP +VLCT+RLARRVLSR Sbjct: 112 PTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARRCDITWPQPQVLCTMRLARRVLSR 171 Query: 186 EEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPG 245 +EAPSVRLAALARLF+VA+ PTHRALDDARATV+VLHALIERVGNQGVH+YAELR+YLP Sbjct: 172 DEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHALIERVGNQGVHTYAELRSYLPN 231 Query: 246 VTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEM 305 VT AQR KRVLA+ LPHRPG+YLFRGPSGEVLYVGTA DLRRRVSQYFNG D R RM EM Sbjct: 232 VTQAQRCKRVLAETLPHRPGVYLFRGPSGEVLYVGTAADLRRRVSQYFNGTDRRKRMTEM 291 Query: 306 VALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVR 365 V LA ++DHVECAH LEAGVRELRML+ HAPPYNRRS+FP+RWWWV LTDEAFPRLSV+R Sbjct: 292 VMLASSIDHVECAHPLEAGVRELRMLSTHAPPYNRRSKFPYRWWWVALTDEAFPRLSVIR 351 Query: 366 APRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSACPATRN 425 APRHDRVVGPFRSR+ A ET ALLAR TG+RTCT RL RSA HGPACPELEVSACPA R+ Sbjct: 352 APRHDRVVGPFRSRSKAAETTALLARCTGLRTCTTRLTRSARHGPACPELEVSACPAARD 411 Query: 426 VTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWR 485 VTA YA+A RAA LI G+DN AL AAV QV++LAER RYESAARLRDH+ATA+E LW Sbjct: 412 VTAAQYAEAVLRAAALIGGLDNAALAAAVQQVTELAERRRYESAARLRDHLATAIEALWH 471 Query: 486 GQXXXXXXXXXXXXXXXXDGC--GGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQ 543 GQ DG GGYQ AVIRHGQLAAAG + RG PPMPVVDA+ GAQ Sbjct: 472 GQRLRALAALPELIAAKPDGPREGGYQLAVIRHGQLAAAGRAPRGVPPMPVVDAIRRGAQ 531 Query: 544 TILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPXXXXXXXX 603 ILP PAPLGGALVEE ALIARWLA PGVRIV V+ ++AG SP Sbjct: 532 AILPTPAPLGGALVEEIALIARWLAEPGVRIVGVSN--------DAAGLASPVRSAGPWA 583 Query: 604 XXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSHRGALQPV 663 EQ+ + EPHPSREQL GRT VD G QP+ Sbjct: 584 AWAATARSAQLAGEQL---------SRGWQSDLPTEPHPSREQLFGRTGVDCRTGPPQPL 634 Query: 664 LPGGEPFSAAG 674 LPG +PFS AG Sbjct: 635 LPGRQPFSTAG 645 >tr|A3Q1Q1|A3Q1Q1_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 630 Score = 765 bits (1975), Expect = 0.0 Identities = 402/625 (64%), Positives = 449/625 (71%), Gaps = 17/625 (2%) Query: 50 VSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPP 109 +SLR+TTFVVVDL PDAITEIGAVKVRGG +LGE ATLVDP R+IPP Sbjct: 23 LSLRDTTFVVVDLETTGGRATGER---PDAITEIGAVKVRGGEVLGELATLVDPGRAIPP 79 Query: 110 QIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPG 169 QIV LTGITTAM+C AP I+SVLP F EF SVLVAHNAGFDIGFLRAAA +C + WP Sbjct: 80 QIVSLTGITTAMVCAAPRIESVLPAFLEFARGSVLVAHNAGFDIGFLRAAAEQCGLTWPR 139 Query: 170 SKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVG 229 VLCTV+LARRVL+R+EAPSVRL+ALA+LF T PTHRALDDARATV+VLH LIER+G Sbjct: 140 PPVLCTVKLARRVLTRDEAPSVRLSALAQLFRAKTTPTHRALDDARATVDVLHGLIERIG 199 Query: 230 NQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRV 289 NQGVH+Y +LRAYLP VTPAQRR R LADGLPHRPG+YLFRGP EVLY+GTAVDLRRRV Sbjct: 200 NQGVHTYTDLRAYLPDVTPAQRRNRRLADGLPHRPGVYLFRGPGDEVLYIGTAVDLRRRV 259 Query: 290 SQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWW 349 QYF GAD R RMKEM +LA VDHVECAH LEAGVRELR+LAAHAPPYNRRS+FP RWW Sbjct: 260 GQYFTGADPRARMKEMASLATRVDHVECAHELEAGVRELRLLAAHAPPYNRRSKFPQRWW 319 Query: 350 WVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHG 409 WV LTDE FPR SVVRAPRH VGPFR+RTDA +TA LLARFTGVRTCT RLAR+A HG Sbjct: 320 WVVLTDEPFPRFSVVRAPRHGSAVGPFRARTDAVQTAELLARFTGVRTCTARLARAARHG 379 Query: 410 PACPELEVSACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESA 469 AC E E+S CPA R++ A YA A +RAADLIEG D+ AL A V ++ LA +RYESA Sbjct: 380 AACAERELSPCPAPRDIDAAAYAPAHRRAADLIEGRDDAALAAVVDGIAALAAVNRYESA 439 Query: 470 ARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGT 529 ARLRDH AT ++VLWRGQ DG GG+ AV+R+G+LAAAG +RRG Sbjct: 440 ARLRDHAATGIDVLWRGQRLRALADQTELVAARPDGSGGWDLAVVRYGRLAAAGCARRGV 499 Query: 530 PPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAES 589 PPMPVVDAL A AQT+LP PAPLGGALVEET LIARWL +PGVRIVR Sbjct: 500 PPMPVVDALTAAAQTVLPDPAPLGGALVEETGLIARWLTSPGVRIVRC-----------E 548 Query: 590 AGWTSPXXXXXXXXXXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLG 649 G+ +P EQ +L EPHP+REQL G Sbjct: 549 PGYATPIGAAGRWLGWADTARSARLAAEQT---GADARTRESVPSELLGEPHPTREQLFG 605 Query: 650 RTAVDSHRGALQPVLPGGEPFSAAG 674 RT V+ Q LPG PF AG Sbjct: 606 RTGVNGLGRPGQARLPGRHPFGVAG 630 >tr|Q1B6T8|Q1B6T8_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 630 Score = 763 bits (1969), Expect = 0.0 Identities = 401/625 (64%), Positives = 447/625 (71%), Gaps = 17/625 (2%) Query: 50 VSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPP 109 +SLR+TTFVVVDL PDAITEIGAVKVRGG +LGE ATLVDP R+IPP Sbjct: 23 LSLRDTTFVVVDLETTGGRATGER---PDAITEIGAVKVRGGEVLGELATLVDPGRAIPP 79 Query: 110 QIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPG 169 QIV LTGITTAM+C AP I+SVLP F EF SVLVAHNAGFDIGFLRAAA +C + WP Sbjct: 80 QIVSLTGITTAMVCAAPRIESVLPAFLEFARGSVLVAHNAGFDIGFLRAAAEQCALTWPR 139 Query: 170 SKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVG 229 VLCTV+LARRVL+R+EAPSVRL+ALA+LF T PTHRALDDARATV+VLH LIER+G Sbjct: 140 PPVLCTVKLARRVLTRDEAPSVRLSALAQLFRAKTTPTHRALDDARATVDVLHGLIERIG 199 Query: 230 NQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRV 289 NQGVH+Y +LRAYLP VTPAQRR R LADGLPHRPG+YLFRGP EVLY+GTAVDLRRRV Sbjct: 200 NQGVHTYTDLRAYLPDVTPAQRRNRRLADGLPHRPGVYLFRGPGDEVLYIGTAVDLRRRV 259 Query: 290 SQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWW 349 QYF GAD R RMKEM +LA VDHVECAH LEAGVRELR+LAAHAPPYNRRS+FP RWW Sbjct: 260 GQYFTGADPRARMKEMASLATRVDHVECAHELEAGVRELRLLAAHAPPYNRRSKFPQRWW 319 Query: 350 WVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHG 409 WV LTDE FPR SVVRAPRH VGPFR+RTDA +TA LLARFTGVRTCT RLAR+A HG Sbjct: 320 WVVLTDEPFPRFSVVRAPRHGSAVGPFRARTDAVQTAELLARFTGVRTCTARLARAARHG 379 Query: 410 PACPELEVSACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESA 469 AC E E+S CPA R++ A YA A +RAADLIEG D+ AL A V ++ LA +RYESA Sbjct: 380 AACAERELSPCPAPRDIDAAAYAPAHRRAADLIEGRDDAALAAVVDGIAALAAVNRYESA 439 Query: 470 ARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGT 529 ARLRDH AT ++VLWRGQ DG GG+ AV+R+G+LAAAG +RRG Sbjct: 440 ARLRDHAATGIDVLWRGQRLRALADQTELVAARPDGSGGWDLAVVRYGRLAAAGCARRGV 499 Query: 530 PPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAES 589 PPMPVVDAL A AQT+LP PAPLGGALVEET LI RWL +PGVRIVR Sbjct: 500 PPMPVVDALTAAAQTVLPDPAPLGGALVEETGLITRWLTSPGVRIVRC-----------E 548 Query: 590 AGWTSPXXXXXXXXXXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLG 649 G+ +P EQ +L EPHP+REQL G Sbjct: 549 PGYATPIGAAGRWLGWADTARSARLAAEQT---GADARTRESVPSELLGEPHPTREQLFG 605 Query: 650 RTAVDSHRGALQPVLPGGEPFSAAG 674 R VD Q LPG PF AG Sbjct: 606 RPGVDGLGRPGQARLPGRHPFGVAG 630 >tr|A1UI87|A1UI87_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium sp.] Length = 630 Score = 763 bits (1969), Expect = 0.0 Identities = 401/625 (64%), Positives = 447/625 (71%), Gaps = 17/625 (2%) Query: 50 VSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPP 109 +SLR+TTFVVVDL PDAITEIGAVKVRGG +LGE ATLVDP R+IPP Sbjct: 23 LSLRDTTFVVVDLETTGGRATGER---PDAITEIGAVKVRGGEVLGELATLVDPGRAIPP 79 Query: 110 QIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPG 169 QIV LTGITTAM+C AP I+SVLP F EF SVLVAHNAGFDIGFLRAAA +C + WP Sbjct: 80 QIVSLTGITTAMVCAAPRIESVLPAFLEFARGSVLVAHNAGFDIGFLRAAAEQCALTWPR 139 Query: 170 SKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVG 229 VLCTV+LARRVL+R+EAPSVRL+ALA+LF T PTHRALDDARATV+VLH LIER+G Sbjct: 140 PPVLCTVKLARRVLTRDEAPSVRLSALAQLFRAKTTPTHRALDDARATVDVLHGLIERIG 199 Query: 230 NQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRV 289 NQGVH+Y +LRAYLP VTPAQRR R LADGLPHRPG+YLFRGP EVLY+GTAVDLRRRV Sbjct: 200 NQGVHTYTDLRAYLPDVTPAQRRNRRLADGLPHRPGVYLFRGPGDEVLYIGTAVDLRRRV 259 Query: 290 SQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWW 349 QYF GAD R RMKEM +LA VDHVECAH LEAGVRELR+LAAHAPPYNRRS+FP RWW Sbjct: 260 GQYFTGADPRARMKEMASLATRVDHVECAHELEAGVRELRLLAAHAPPYNRRSKFPQRWW 319 Query: 350 WVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHG 409 WV LTDE FPR SVVRAPRH VGPFR+RTDA +TA LLARFTGVRTCT RLAR+A HG Sbjct: 320 WVVLTDEPFPRFSVVRAPRHGSAVGPFRARTDAVQTAELLARFTGVRTCTARLARAARHG 379 Query: 410 PACPELEVSACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESA 469 AC E E+S CPA R++ A YA A +RAADLIEG D+ AL A V ++ LA +RYESA Sbjct: 380 AACAERELSPCPAPRDIDAAAYAPAHRRAADLIEGRDDAALAAVVDGIAALAAVNRYESA 439 Query: 470 ARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGT 529 ARLRDH AT ++VLWRGQ DG GG+ AV+R+G+LAAAG +RRG Sbjct: 440 ARLRDHAATGIDVLWRGQRLRALADQTELVAARPDGSGGWDLAVVRYGRLAAAGCARRGV 499 Query: 530 PPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAES 589 PPMPVVDAL A AQT+LP PAPLGGALVEET LI RWL +PGVRIVR Sbjct: 500 PPMPVVDALTAAAQTVLPDPAPLGGALVEETGLITRWLTSPGVRIVRC-----------E 548 Query: 590 AGWTSPXXXXXXXXXXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLG 649 G+ +P EQ +L EPHP+REQL G Sbjct: 549 PGYATPIGAAGRWLGWADTARSARLAAEQT---GADARTRESVPSELLGEPHPTREQLFG 605 Query: 650 RTAVDSHRGALQPVLPGGEPFSAAG 674 R VD Q LPG PF AG Sbjct: 606 RPGVDGLGRPGQARLPGRHPFGVAG 630 >tr|A4TBH6|A4TBH6_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Mycobacterium gilvum] Length = 617 Score = 747 bits (1928), Expect = 0.0 Identities = 400/634 (63%), Positives = 444/634 (70%), Gaps = 26/634 (4%) Query: 41 DPAAAQADDVSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATL 100 DP A D +LRETTFVVVDL DAITEIGAVKVRGG +LGEFATL Sbjct: 10 DPRA----DPTLRETTFVVVDLETTGGRASGDRH---DAITEIGAVKVRGGEVLGEFATL 62 Query: 101 VDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAA 160 VDP R+IPPQIV LTGIT+AM+ DAP I+SVLP F EF +VLVAHNAGFD+GFLRAAA Sbjct: 63 VDPGRAIPPQIVALTGITSAMVYDAPRIESVLPSFLEFCRGAVLVAHNAGFDMGFLRAAA 122 Query: 161 GRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEV 220 R + WP VLCTV LARRVL+R+EAPSV+L+ALARLF +T PTHRALDDARATV+V Sbjct: 123 ERNQVPWPKPPVLCTVALARRVLTRDEAPSVKLSALARLFGASTTPTHRALDDARATVDV 182 Query: 221 LHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVG 280 LHALIERVGNQGVH+YAELRAYLP VTPAQRRKR LA LP PG+YLFRGPS EVLYVG Sbjct: 183 LHALIERVGNQGVHTYAELRAYLPDVTPAQRRKRHLAHSLPRSPGVYLFRGPSAEVLYVG 242 Query: 281 TAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNR 340 TAVDLRRRV QYFNGAD R RMKEM +LA AVDHVECAH LEAGVRELR+LAAHAPPYNR Sbjct: 243 TAVDLRRRVGQYFNGADPRTRMKEMASLATAVDHVECAHDLEAGVRELRLLAAHAPPYNR 302 Query: 341 RSRFPHRWWWVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTK 400 RS+FPHRWWWVTLTDE FPR S VR PR D VGPFRSR +A + AAL+ARFTGVRTCT Sbjct: 303 RSKFPHRWWWVTLTDEPFPRFSTVRTPRTDSAVGPFRSRAEAFDAAALMARFTGVRTCTN 362 Query: 401 RLARSALHGPACPELEVSACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDL 460 RL R A HGP CPE EVS CPA R+ A+ YA A A LI+G D L AA+ ++DL Sbjct: 363 RLGRKAFHGPTCPEREVSPCPAVRDADAQTYAAAVADARALIDGRDGRPLAAALSHIADL 422 Query: 461 AERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLA 520 AER+RYE+AARLRDH A ++VLWRGQ DG G+ AV+RHGQLA Sbjct: 423 AERNRYETAARLRDHAAATIDVLWRGQRLRALSTIPELVAAKPDGDRGWHLAVVRHGQLA 482 Query: 521 AAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGT 580 +AG + RG PPMPVVDAL A AQ++LP P PLGGALVEETALIARWL GVRIVR Sbjct: 483 SAGVAPRGVPPMPVVDALTAAAQSVLPGPGPLGGALVEETALIARWLGQAGVRIVRA--- 539 Query: 581 EHTADRAESAGWTSPXXXXXXXXXXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEP 640 AG+ SP EQ+ +L EP Sbjct: 540 --------DAGYCSPIAAAGRWAHWAATARSARLAAEQL--------SASRLGSELLGEP 583 Query: 641 HPSREQLLGRTAVDSHRGALQPVLPGGEPFSAAG 674 HP+REQL GR VD + LP G P AG Sbjct: 584 HPTREQLFGRPGVDRLLRPRETGLPRGNPLGVAG 617 >tr|A0R047|A0R047_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase III, epsilon subunit;[Mycobacterium smegmatis] Length = 672 Score = 733 bits (1891), Expect = 0.0 Identities = 401/678 (59%), Positives = 452/678 (66%), Gaps = 47/678 (6%) Query: 1 MSVRVPNVTAMGATG---GTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTF 57 MSV PNV AM G QLSL D+ L DVSL +TTF Sbjct: 38 MSVGFPNVIAMSQRSTAVGAQLSL---------DMELER------------DVSLADTTF 76 Query: 58 VVVDLXXXXXXXXXXXXSPP-DAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTG 116 VVVDL DAITEIGAVKVRGG +LGE ATLVDP R+IPPQIV LTG Sbjct: 77 VVVDLETTGGRAKATAPGGLCDAITEIGAVKVRGGEVLGELATLVDPGRAIPPQIVELTG 136 Query: 117 ITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTV 176 ITTAM+ DAP ID+VLPMF EF +VLVAHNAGFDIGFLRAAA R + WP VLCTV Sbjct: 137 ITTAMVRDAPRIDAVLPMFLEFARGAVLVAHNAGFDIGFLRAAAERTQLTWPRPPVLCTV 196 Query: 177 RLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSY 236 +LARRVL+R+EAPSVRL+ LARLF +T PTHRALDDARATV+VLH LIERVGNQGVH+ Sbjct: 197 KLARRVLTRDEAPSVRLSELARLFGASTTPTHRALDDARATVDVLHGLIERVGNQGVHTL 256 Query: 237 AELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGA 296 A+LRAYLP TPAQRR R LADGLP+RPG+YLFRGPS EVLYVGTAVDLRRRV QYF GA Sbjct: 257 ADLRAYLPDTTPAQRRNRALADGLPNRPGVYLFRGPSDEVLYVGTAVDLRRRVRQYFTGA 316 Query: 297 DSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDE 356 D R RMKEM +LA VDHVECAH LEAGVRELR+LAAHAPPYNRRS+ P RWWWV LTDE Sbjct: 317 DPRARMKEMASLATRVDHVECAHDLEAGVRELRLLAAHAPPYNRRSKAPKRWWWVALTDE 376 Query: 357 AFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELE 416 FPRLS VR PRH + +GPF +R+DA ETA LLARFTGVRTCT R + +H CPE E Sbjct: 377 PFPRLSAVRDPRHRKAIGPFSARSDAVETADLLARFTGVRTCTSRFGATGIH--RCPERE 434 Query: 417 VSACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHI 476 +S CPAT++ A+ YA AA+RAADLI+G D+ L + + LA RYE AAR+RDH Sbjct: 435 LSPCPATQSAGADEYAAAARRAADLIDGADSAVLADVLMHIEKLAADSRYEKAARVRDHA 494 Query: 477 ATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVD 536 A A++ LWRGQ DG GG+ FAV+R+GQLA AG +RRG PPMPVVD Sbjct: 495 AVAIDTLWRGQRLQTLTSLPELVAARRDGNGGWHFAVVRYGQLAGAGTARRGVPPMPVVD 554 Query: 537 ALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSPX 596 A+ A AQ ++P PLGGALVEETALIARWLA P VRIVR G GW +P Sbjct: 555 AICAAAQVVMPTAEPLGGALVEETALIARWLAAPDVRIVRTAG-------QTDMGWATPI 607 Query: 597 XXXXXXXXXXXXXXXXXXXXEQVXXXXXXXXXXXXXXXXVLAEPHPSREQLLGRTAVDSH 656 Q +L EPHP+REQL GRT VD Sbjct: 608 GAAGRYAQWAATARSARLAALQ-------------DRSELLTEPHPTREQLFGRTGVDGL 654 Query: 657 RGALQPVLPGGEPFSAAG 674 G + LP +P S AG Sbjct: 655 DGTRETGLPRRKPLSVAG 672 >tr|B1MP02|B1MP02_MYCA9 Tax_Id=561007 SubName: Full=Probable DNA polymerase III epsilon subunit;[Mycobacterium abscessus] Length = 600 Score = 617 bits (1590), Expect = e-174 Identities = 334/561 (59%), Positives = 377/561 (67%), Gaps = 14/561 (2%) Query: 42 PAAAQADDV-SLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATL 100 P+ D+V +LR+TTFVVVDL + DAITEIGAVKVRGG +LGE ATL Sbjct: 12 PSQLTFDEVGTLRDTTFVVVDLETTGGS------AENDAITEIGAVKVRGGEVLGELATL 65 Query: 101 VDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAA 160 VDPQRS+PPQIVRLTGIT+AML DAP I VLP F EF +VLVAHNAGFDIGFL+AAA Sbjct: 66 VDPQRSLPPQIVRLTGITSAMLVDAPPIAQVLPAFLEFARGAVLVAHNAGFDIGFLKAAA 125 Query: 161 GRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEV 220 +C I WP VLCTVRLARRVLSR+EAP V L ALA+L +T P HRALDDARATV+V Sbjct: 126 RQCGIDWPQPAVLCTVRLARRVLSRDEAPRVSLGALAQLLGASTTPNHRALDDARATVDV 185 Query: 221 LHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVG 280 LHALI RVGNQGV + ELR Y V A R KR LAD +P+ PG+YLFRGPSGEVLYVG Sbjct: 186 LHALISRVGNQGVGTMDELRRYRTQVPSALRGKRRLADAMPYAPGVYLFRGPSGEVLYVG 245 Query: 281 TAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNR 340 TAV+LRRRV QYF GAD RGRM+EMV +A AVDHV CAH LEA VRELR+L AHAPPYNR Sbjct: 246 TAVNLRRRVQQYFTGADPRGRMREMVTIATAVDHVICAHPLEAAVRELRLLGAHAPPYNR 305 Query: 341 RSRFPHRWWWVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTK 400 +SRFPHRWWWV LT+E FPR SVVR +GPFR+R DAT A +LARFTGVRTCT Sbjct: 306 KSRFPHRWWWVVLTEEPFPRFSVVRTTNGRPTLGPFRARGDATTAALVLARFTGVRTCTN 365 Query: 401 RLARSALHGPAC-----PELEVSACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVH 455 R+ HG AC P S CPA V A Y D +++G L A Sbjct: 366 RIGAGGRHGSACDGQSYPHDTASPCPAAAGVDATVYRDGLAPMLAVLDGTHGQPLQAMCD 425 Query: 456 QVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIR 515 +V++L + RYE+AAR RD +EVL R DG GG+Q AV+R Sbjct: 426 RVAELGAQRRYETAARQRDATTALIEVLARQHRLHALARIEELIAARPDGEGGWQIAVVR 485 Query: 516 HGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIV 575 HGQLA A +RRG PPMPVV A A AQ +LP P P GGA EET LI RWLA PGVRIV Sbjct: 486 HGQLAGAAVARRGVPPMPVVAAASASAQVVLPTPEPFGGAAPEETGLITRWLAEPGVRIV 545 Query: 576 RVTG--TEHTADRAESAGWTS 594 T E T A W + Sbjct: 546 SSTDGYAEATGCAASLRDWAA 566 >tr|C1A114|C1A114_RHOE4 Tax_Id=234621 (dnaQ)SubName: Full=Putative DNA polymerase III epsilon subunit; EC=2.7.7.7;[Rhodococcus erythropolis] Length = 586 Score = 608 bits (1568), Expect = e-172 Identities = 321/532 (60%), Positives = 377/532 (70%), Gaps = 9/532 (1%) Query: 49 DVSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIP 108 D L ETTFVVVDL + D+ITEIGAVK+RGG +LGE ATLVDP RSIP Sbjct: 33 DTPLSETTFVVVDLETTGGS------ADQDSITEIGAVKIRGGEVLGEMATLVDPGRSIP 86 Query: 109 PQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWP 168 P IV LTGITTAML AP I+ VLP F EF +VLVAHNA FDIGFL+AAA R WP Sbjct: 87 PYIVELTGITTAMLIGAPPIERVLPAFLEFAEGAVLVAHNAPFDIGFLKAAASRSARPWP 146 Query: 169 GSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERV 228 +VLCTV+LARRVL+R+EAPSV+L+ALA LF V TQPTHRALDDARATV+VLH LI+RV Sbjct: 147 SFRVLCTVKLARRVLTRDEAPSVKLSALAHLFQVTTQPTHRALDDARATVDVLHGLIDRV 206 Query: 229 GNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRR 288 GNQGVHSY+EL YLP ++ QR KR A LP PG+YLFRGPS E LY+GTA DLRRR Sbjct: 207 GNQGVHSYSELVDYLPNISSHQRAKRSFAANLPRSPGVYLFRGPSDEALYIGTATDLRRR 266 Query: 289 VSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRW 348 V YF G+++RGRMKEMVALA VDHVECAHALEAGVRELR+L+AHAPPYNRRS+FP R Sbjct: 267 VRNYFTGSETRGRMKEMVALATRVDHVECAHALEAGVRELRLLSAHAPPYNRRSKFPKRG 326 Query: 349 WWVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALH 408 WW+TLTDEAFPRLSVVR P D +GPF SR DA E A +A F+ +RTCTKRL R A+H Sbjct: 327 WWITLTDEAFPRLSVVRTPTADS-IGPFTSRGDAVEVADTVAEFSRLRTCTKRLGRGAVH 385 Query: 409 GPACPELEVSACPAT--RNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRY 466 GP CP E+ ACPA+ +TA+ YA A + G ++ L ++ +L+E + Sbjct: 386 GPDCPARELGACPASWAPELTAQDYAAAPETVRGFFRGTNDAPLQQMQARIDELSEHALF 445 Query: 467 ESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSR 526 E+AARLRD + R Q G GG++ +VIR G+LA+AG +R Sbjct: 446 ENAARLRDRTVAVSTAVRRTQRLAAVAAIEQLILARPTGDGGWELSVIRSGRLASAGLAR 505 Query: 527 RGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVT 578 RGT PMPVVDA+ A A+T+LP AP GA EE LIARWLA+ GVRIV T Sbjct: 506 RGTHPMPVVDAITAAAETVLPDDAPFRGASPEELGLIARWLASDGVRIVSAT 557 >tr|C3JJ89|C3JJ89_RHOER Tax_Id=596309 SubName: Full=DNA polymerase III, epsilon subunit;[Rhodococcus erythropolis SK121] Length = 608 Score = 605 bits (1561), Expect = e-171 Identities = 326/574 (56%), Positives = 390/574 (67%), Gaps = 17/574 (2%) Query: 14 TGGTQLSLTGLDPAAFADIALPGT-------DLTDPAAAQADDVSLRETTFVVVDLXXXX 66 +GGT ++ G+ PA+ + P D+ + D L ETTFVVVDL Sbjct: 14 SGGTS-TVCGVSPASAREFPSPPPFSDGEKFDVGRQLSFDELDTPLSETTFVVVDLETTG 72 Query: 67 XXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDAP 126 + D+ITEIGAVK+RGG +LGE ATLVDP RSIPP IV LTGITTAML AP Sbjct: 73 GS------ADQDSITEIGAVKIRGGEVLGEMATLVDPGRSIPPYIVELTGITTAMLIGAP 126 Query: 127 TIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSRE 186 I+ VLP F EF +VLVAHNA FDIGFL+AAA R WP +VLCTV+LARRVL+R+ Sbjct: 127 PIERVLPAFLEFAEGAVLVAHNAPFDIGFLKAAASRSARPWPAFRVLCTVKLARRVLTRD 186 Query: 187 EAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPGV 246 EAPSV+L+ALA LF V TQPTHRALDDARATV+VLH LI+RVGNQGVHSY+EL YLP + Sbjct: 187 EAPSVKLSALAHLFQVTTQPTHRALDDARATVDVLHGLIDRVGNQGVHSYSELVDYLPNI 246 Query: 247 TPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEMV 306 + QR KR A LP PG+YLFRGPS E LY+GTA DLRRRV YF G+++RGRMKEMV Sbjct: 247 SSHQRAKRSFAANLPRSPGVYLFRGPSDEALYIGTATDLRRRVRNYFTGSETRGRMKEMV 306 Query: 307 ALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVRA 366 ALA VDHVECAHALEAGVRELR+L+AHAPPYNRRS+FP R WW+TLTDEAFPRLSVVR Sbjct: 307 ALATRVDHVECAHALEAGVRELRLLSAHAPPYNRRSKFPKRGWWITLTDEAFPRLSVVRT 366 Query: 367 PRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSACPA--TR 424 P D +GPF SR DA + A +A F+ +RTCTKRL R A+HGP CP E+ ACPA T Sbjct: 367 PTADS-IGPFTSRADAVDVADTVAEFSRLRTCTKRLGRGAVHGPDCPARELGACPASWTP 425 Query: 425 NVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLW 484 + A YA A + G ++ L ++ +L+ +E+AARLRD + Sbjct: 426 EINAADYAAAPEAVRGFFRGTNDAPLQQMQARIDELSAHALFENAARLRDRTVAVATAVR 485 Query: 485 RGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQT 544 R Q G GG++ +VIR G+LA+AG +RRGT PMPVVDA+ A A+T Sbjct: 486 RTQRLAAVAAIEQLVLARPTGDGGWELSVIRSGRLASAGLARRGTHPMPVVDAITAAAET 545 Query: 545 ILPAPAPLGGALVEETALIARWLATPGVRIVRVT 578 +LP AP GA EE LIARWL++ GVRIV T Sbjct: 546 VLPDDAPFRGASPEELGLIARWLSSDGVRIVSAT 579 >tr|Q5YZ23|Q5YZ23_NOCFA Tax_Id=37329 SubName: Full=Putative DNA polymerase III subunit;[Nocardia farcinica] Length = 598 Score = 590 bits (1520), Expect = e-166 Identities = 323/556 (58%), Positives = 376/556 (67%), Gaps = 32/556 (5%) Query: 49 DVSLRETTFVVVDLXXXXXXXXXXXXSPP-DAITEIGAVKVRGGVILGEFATLVDPQRSI 107 D L +TTFVVVDL SP DAITEIGAVKVRGG +LGEFATLV+P R+I Sbjct: 19 DTPLYDTTFVVVDLETTGT-------SPEGDAITEIGAVKVRGGEVLGEFATLVNPGRAI 71 Query: 108 PPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAW 167 PP +V++TGITTA++ AP I++VLP F EF +VLVAHNA FD FLRAAA RC + W Sbjct: 72 PPAVVQVTGITTALVYAAPRIEAVLPGFLEFAAGAVLVAHNARFDTAFLRAAAARCALPW 131 Query: 168 PGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIER 227 P + VLCTV+LARRVL R+EAPSVRLA+LARL +TQPTHRALDDARATV+VLHALI R Sbjct: 132 PDAPVLCTVKLARRVLGRDEAPSVRLASLARLLGASTQPTHRALDDARATVDVLHALIAR 191 Query: 228 VGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRR 287 VGNQGVHS EL YLP V+ QR KR A GLP PG+YLFRGPS EVLY+GTAV+LRR Sbjct: 192 VGNQGVHSLTELMDYLPDVSAGQRAKRSFAAGLPTAPGVYLFRGPSDEVLYIGTAVNLRR 251 Query: 288 RVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHR 347 RV YF G+++RGRMKEMVALA VDHV CAH LEAGVRELR+L AHAPPYNRRS+FP R Sbjct: 252 RVRTYFTGSETRGRMKEMVALATRVDHVVCAHGLEAGVRELRLLVAHAPPYNRRSKFPKR 311 Query: 348 WWWVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSAL 407 WW+TLTDEAFPRL+VVR P D +GPF SR DA + AA LA G+RTCT RLARSA+ Sbjct: 312 VWWITLTDEAFPRLAVVRTPTPD-ALGPFTSRQDAVDVAATLAEHAGLRTCTTRLARSAV 370 Query: 408 HGPACPELEVSACPATRNV--TAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHR 465 H CP V CPA R TA YA A DL+ G +T L ++ A Sbjct: 371 HD--CPPSVVGGCPAARETPCTAAEYAPAPAAVRDLVAGRCDTVLHTMRARIDSAAAAEH 428 Query: 466 YESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNS 525 +E+AARLRD + V L R Q DG GG++FAV+R+G+LA AG + Sbjct: 429 FEAAARLRDRMVAVVRALRRTQRLAALARIAELIAAHPDGAGGWEFAVVRYGRLAGAGVA 488 Query: 526 RRGTPPMPVVDALHAGAQTILP-------------------APAPLGGALVEETALIARW 566 RGTPPMPVV+ + A A+T++P PL GA EE LIARW Sbjct: 489 ARGTPPMPVVEQIVAAAETVVPDGVAGVGVPDDEVAGLAELVGPPLLGAPPEEVGLIARW 548 Query: 567 LATPGVRIVRVTGTEH 582 L PGVRIVR + H Sbjct: 549 LERPGVRIVRTSHGYH 564 >tr|Q0SHN3|Q0SHN3_RHOSR Tax_Id=101510 SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7;[Rhodococcus sp.] Length = 588 Score = 581 bits (1498), Expect = e-163 Identities = 315/549 (57%), Positives = 369/549 (67%), Gaps = 20/549 (3%) Query: 49 DVSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIP 108 D LR+TTFVVVDL DAITEIGAVK+RGG ++ E ATLVDP RSIP Sbjct: 16 DTPLRDTTFVVVDLETTGARPGE------DAITEIGAVKIRGGEVIAEMATLVDPGRSIP 69 Query: 109 PQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWP 168 P IV +TGITTAM+ DAP I+ VLP F EF +VLVAHNA FD GFL+AAA D WP Sbjct: 70 PHIVEITGITTAMVIDAPRIERVLPAFLEFARGAVLVAHNAPFDTGFLKAAASATDTPWP 129 Query: 169 GSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERV 228 VLCTV+LARRVLSR+EAPSV+L++LARLF V T PTHRALDDARATV+VLHALI RV Sbjct: 130 KFTVLCTVKLARRVLSRDEAPSVKLSSLARLFDVGTTPTHRALDDARATVDVLHALIARV 189 Query: 229 GNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRR 288 GNQGVHS EL YLP V+ QR KR LA LPH PG+YLFRGPS EVLYVGTA DLRRR Sbjct: 190 GNQGVHSLTELVDYLPDVSSHQRAKRSLAGHLPHAPGVYLFRGPSDEVLYVGTATDLRRR 249 Query: 289 VSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRW 348 V YF G+++RGRMKEMVAL +DHVECAHALEAGVRELR+LAAH PPYNRRS++P R Sbjct: 250 VRNYFTGSETRGRMKEMVALTTRIDHVECAHALEAGVRELRLLAAHTPPYNRRSKYPKRG 309 Query: 349 WWVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALH 408 WW+TLT EAFPRLSVVR P D +GPFRSR+ A + A +LA + +RTCT R+ + H Sbjct: 310 WWITLTVEAFPRLSVVRTPTADS-LGPFRSRSTAVDLADVLAEYCILRTCTSRIPKGREH 368 Query: 409 GPACPELEVSACPAT--RNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRY 466 GP CP E++ CPA+ T + Y + + G+D+ L QV +LA + Sbjct: 369 GPQCPPRELAGCPASVHDRATEDAYRPGPELFRQFLRGLDDAPLHRMRAQVEELAAGELF 428 Query: 467 ESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSR 526 E+AARLRD A V L R Q GG++FAVIR G+LA+AG +R Sbjct: 429 ENAARLRDRTAEVVLALRRMQRLAALTALDQLVAARPAATGGWEFAVIRSGRLASAGCAR 488 Query: 527 RGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADR 586 RG PMPVVDAL A+T++P PL GA EE L+ARWL RIV Sbjct: 489 RGIHPMPVVDALVLTAETVVPDATPLRGASPEEAGLLARWLDQEDTRIV----------- 537 Query: 587 AESAGWTSP 595 + SAGW P Sbjct: 538 SASAGWCEP 546 >tr|C1AU93|C1AU93_RHOOB Tax_Id=632772 (dnaQ)SubName: Full=Putative DNA polymerase III epsilon subunit; EC=2.7.7.7;[Rhodococcus opacus] Length = 588 Score = 571 bits (1472), Expect = e-160 Identities = 312/550 (56%), Positives = 367/550 (66%), Gaps = 22/550 (4%) Query: 49 DVSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIP 108 D LR+TTFVVVDL DAITEIGAVK+RGG ++ E ATLVDP RSIP Sbjct: 16 DTPLRDTTFVVVDLETTGARPGE------DAITEIGAVKIRGGEVIAEMATLVDPGRSIP 69 Query: 109 PQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWP 168 P IV +TGITTAM+ DAP I+ VLP F EF +VLVAHNA FD GFL+AAA D WP Sbjct: 70 PHIVEITGITTAMVIDAPRIERVLPAFLEFARGAVLVAHNAPFDTGFLKAAAAATDTPWP 129 Query: 169 GSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERV 228 VLCTV+LARRVL+R+EAPSV+L++LARL V T PTHRALDDARATV+VLHALI RV Sbjct: 130 KFTVLCTVKLARRVLTRDEAPSVKLSSLARLLDVGTTPTHRALDDARATVDVLHALIARV 189 Query: 229 GNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRR 288 GNQGVHS EL YLP V+ QR KR LA LPH PG+YLFRGPS EVLYVGTA DLRRR Sbjct: 190 GNQGVHSLTELVDYLPDVSSHQRAKRTLASHLPHAPGVYLFRGPSDEVLYVGTATDLRRR 249 Query: 289 VSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRW 348 V YF G+++RGRMKEMVAL +DHVECAHALEAGVRELR+LAAH PPYNRRS++P R Sbjct: 250 VRNYFTGSETRGRMKEMVALTTRIDHVECAHALEAGVRELRLLAAHTPPYNRRSKYPKRG 309 Query: 349 WWVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALH 408 WW+TLT EAFPRLSVVR P D +GPFRSR+ A + A +LA + +RTCT R+ + H Sbjct: 310 WWITLTAEAFPRLSVVRTPAADS-LGPFRSRSTAVDVADVLAEYCILRTCTSRIPKGREH 368 Query: 409 GPACPELEVSACPAT---RNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHR 465 G CP E+ CPA+ RN T + Y + + G D+ L +V +LA Sbjct: 369 GAQCPPRELGRCPASVHGRN-TEDAYRPGPELFRLFLRGADDAPLHRMRARVEELAAGEL 427 Query: 466 YESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNS 525 +E+AARLRD A V L R Q GG++FAVIR G+LA+AG + Sbjct: 428 FENAARLRDRTAEVVLALRRMQRLAALTALDQLVAARPAATGGWEFAVIRSGRLASAGCA 487 Query: 526 RRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTAD 585 RRG PMPVVDAL A+T++P PL GA EE L+ARWL RIV Sbjct: 488 RRGIHPMPVVDALVLTAETVVPDATPLRGASPEEAGLLARWLDQDDTRIV---------- 537 Query: 586 RAESAGWTSP 595 + S+GW P Sbjct: 538 -SASSGWCEP 546 >tr|C2ATW2|C2ATW2_TSUPA Tax_Id=521096 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Tsukamurella paurometabola DSM 20162] Length = 610 Score = 543 bits (1398), Expect = e-152 Identities = 302/563 (53%), Positives = 359/563 (63%), Gaps = 28/563 (4%) Query: 41 DPAAAQADDVSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATL 100 D + A D LRE TFVVVDL DAITEIGAVKVRGG +LGEFATL Sbjct: 6 DDCDSPAADPDLREVTFVVVDLETTGGSPKGG-----DAITEIGAVKVRGGEVLGEFATL 60 Query: 101 VDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAA 160 VDP+R I P I LTGITTAM+ APTI SVLP F EF +VLVAHNA FDIGFL+AAA Sbjct: 61 VDPERGIAPHITHLTGITTAMVTGAPTIASVLPAFLEFAQGAVLVAHNARFDIGFLKAAA 120 Query: 161 GRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEV 220 WP + LCTV+LARRVL+R+EAPSV+L+ +ARLF T PTHRALDDARATV+V Sbjct: 121 AATGTPWPKPQTLCTVQLARRVLTRDEAPSVKLSEMARLFRAETTPTHRALDDARATVDV 180 Query: 221 LHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVG 280 LH LI RVGN G+ ++AELR +LP VTP QR KR LAD LP RPG+YLFRGP EVLYVG Sbjct: 181 LHGLIGRVGNLGIRTFAELRGHLPSVTPQQRAKRGLADPLPERPGVYLFRGPGDEVLYVG 240 Query: 281 TAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNR 340 T+ +LRRRV YF ++RGR+KEMV LA VDHVECAHALEA RELR++AAH PPYNR Sbjct: 241 TSRNLRRRVRSYFTSGETRGRIKEMVGLAERVDHVECAHALEAAARELRLIAAHTPPYNR 300 Query: 341 RSRFPHRWWWVTLTDEAFPRLSVVR-APRHDRVVGPFRSRTDATETAALLARFTGVRTCT 399 RS++P R WW+ LT E FPRL+V R AP +GP RSRT+A + A L+A G+RTCT Sbjct: 301 RSKYPKRGWWICLTVEPFPRLAVKRSAPAGSVCLGPIRSRTEAADLADLIAETCGLRTCT 360 Query: 400 KRLARSALHGPAC-PE--LEVSACPATRNV--TAEGYADAAKRAADLIEGVDNTALTAAV 454 RL H A P+ V C + + A Y A RAA ++ G + A Sbjct: 361 TRLRPGGAHACALGPDGTRPVGGCHGSVSAPEPASLYRPRADRAAAMLTGRSSAVFDALQ 420 Query: 455 HQVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVI 514 ++ L ER +ESAARLRD A V++ R DG GG++ +++ Sbjct: 421 ARLDSLVEREFFESAARLRDRTAQLVDITLRSHSLAAFAEVPELSIAHPDGAGGWELSIV 480 Query: 515 RHGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAP-----------------LGGALV 557 RHG+LAAAG + RG PPMPV D L +GA+T+ A AP L GA Sbjct: 481 RHGRLAAAGVAPRGVPPMPVFDRLRSGAETVYEADAPADQPALFVPDALFPADVLHGASP 540 Query: 558 EETALIARWLATPGVRIVRVTGT 580 EE AL+ RW PG RIV V GT Sbjct: 541 EEAALLRRWALQPGTRIVEVRGT 563 >tr|C7MZ07|C7MZ07_SACVD Tax_Id=471857 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Saccharomonospora viridis] Length = 570 Score = 540 bits (1392), Expect = e-151 Identities = 300/548 (54%), Positives = 356/548 (64%), Gaps = 24/548 (4%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDA--ITEIGAVKVRGGVILGEFATLVDPQRSIPP 109 LRE TFVVVDL PD ITEIGAVKVRGG ++GEFATLVDP IPP Sbjct: 12 LREVTFVVVDLETTGVT--------PDGAGITEIGAVKVRGGEVVGEFATLVDPGVPIPP 63 Query: 110 QIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPG 169 QIV LTGIT AM+ AP I+ VLP F EFV +VLVAHNAGFD+ FL+AA WP Sbjct: 64 QIVALTGITPAMVRSAPRIEQVLPTFLEFVSGAVLVAHNAGFDVSFLKAACQTHGYEWPK 123 Query: 170 SKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVG 229 V+CT++LARRVL R+E RL+ LA LF + P HRALDDA+ATV+VLH L+ERVG Sbjct: 124 PTVVCTLKLARRVLGRQETRGHRLSTLASLFGARSTPKHRALDDAKATVDVLHGLLERVG 183 Query: 230 NQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRV 289 GV S EL YL VTPAQRRKR LA LP RPG+YLFRGPS EVLYVGTA +LRRRV Sbjct: 184 PLGVQSLEELLDYLRAVTPAQRRKRGLAAHLPERPGVYLFRGPSDEVLYVGTARNLRRRV 243 Query: 290 SQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWW 349 QYF +D+RGR++EMVALA VD VEC+HALEA VRELR+LAA+ PPYNRRSR P + W Sbjct: 244 RQYFTASDNRGRIREMVALAERVDAVECSHALEAAVRELRLLAAYRPPYNRRSRNPSKVW 303 Query: 350 WVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHG 409 WV LTDE FPRLSVVR PR D +GPF SR A A LA +RTCT+R+ + G Sbjct: 304 WVVLTDEPFPRLSVVRQPR-DGALGPFTSRNSARAVADTLADLARLRTCTRRIPATGAAG 362 Query: 410 PACPELEVSAC--PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYE 467 P+C E+ +C P TAE Y + + +DLI+GVD L Q+ L+ +E Sbjct: 363 PSCVLAELGSCGAPCIGAQTAEDYRLSVRLVSDLIDGVDTALLRRGHEQLDALSAIQHFE 422 Query: 468 SAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRR 527 AAR RD + + + + DG GG++FAV+R+G+LA+AG +RR Sbjct: 423 RAARRRDELVAVLRAVDKRHRLAALASLEELVAASPDGSGGWEFAVVRYGRLASAGVARR 482 Query: 528 GTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRA 587 G PPMPVVDAL A+T+LP P PL GA EETAL+ RWL PGVR+VR Sbjct: 483 GVPPMPVVDALVDSAETVLPEPGPLRGANGEETALLWRWLTRPGVRLVRT---------- 532 Query: 588 ESAGWTSP 595 SA W P Sbjct: 533 -SAPWAEP 539 >tr|C6W9G7|C6W9G7_ACTMD Tax_Id=446462 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Actinosynnema mirum] Length = 578 Score = 536 bits (1380), Expect = e-150 Identities = 297/548 (54%), Positives = 354/548 (64%), Gaps = 12/548 (2%) Query: 32 IALPGTDLTDPAAAQADDVS--LRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVR 89 + +PG T PA D++ LRETTFVV DL + D ITEIGAVKVR Sbjct: 4 VTVPGMPTTPPAQLSFDELGTPLRETTFVVFDLETTGPR------AAEDGITEIGAVKVR 57 Query: 90 GGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNA 149 GG ++GEF TLVDP+R IPPQIV LTGIT M+ AP + SVLP F EF +VLVAHN+ Sbjct: 58 GGRVIGEFGTLVDPERGIPPQIVALTGITQNMVTGAPVLASVLPAFLEFAEGAVLVAHNS 117 Query: 150 GFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHR 209 GFD+GF++AA R AWP V+CTV+LARRVLSREEAPS +L+AL+ LF V P HR Sbjct: 118 GFDVGFMKAACERHGYAWPKPPVVCTVKLARRVLSREEAPSCKLSALSALFGVPEAPNHR 177 Query: 210 ALDDARATVEVLHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLF 269 AL DARATVEVLH L+ERVG+ GVHS EL AYLP V+P QRRKR LA LP PG+YLF Sbjct: 178 ALVDARATVEVLHRLLERVGSVGVHSLEELLAYLPDVSPQQRRKRSLAADLPSAPGVYLF 237 Query: 270 RGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELR 329 RGPS EVLYVGTA DLRRRV QYF +++R R++EMVALA VD VECAH LEA VRELR Sbjct: 238 RGPSEEVLYVGTASDLRRRVRQYFTASETRHRLREMVALAVRVDWVECAHPLEAQVRELR 297 Query: 330 MLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALL 389 ++AAH P YNRRS+ WW+ LTDEAFPRLSVVR R + +GPF +R A A L Sbjct: 298 LIAAHRPAYNRRSKNTAS-WWLALTDEAFPRLSVVRTAR-EGALGPFPTRRAADAAAEAL 355 Query: 390 ARFTGVRTCTKRLARSALHGPACPELEVSAC--PATRNVTAEGYADAAKRAADLIEGVDN 447 +R C +R+ G C LE+ C P + YADA RA LI G Sbjct: 356 LEAVPLRACAQRIPARGASGTPCALLEMGRCKAPCAGLQEVDDYADAVARARALIAGEST 415 Query: 448 TALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCG 507 AL A ++ +LA R+E AA RD +A V L RGQ DG G Sbjct: 416 EALGGAAARLGELALEERFEEAALRRDRLAGLVRALDRGQRLAALAAVEELVAARPDGAG 475 Query: 508 GYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWL 567 G+ FAV+RHG+LA+AG + RG PPMPVVDAL A A+T+LP PL G EE ++ RW+ Sbjct: 476 GWWFAVVRHGRLASAGVAPRGVPPMPVVDALVASAETVLPGAGPLLGGSAEEVGVVLRWV 535 Query: 568 ATPGVRIV 575 PG R+V Sbjct: 536 EQPGTRMV 543 >tr|D0LAW5|D0LAW5_GORB4 Tax_Id=526226 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Gordonia bronchialis] Length = 595 Score = 529 bits (1362), Expect = e-148 Identities = 297/547 (54%), Positives = 350/547 (63%), Gaps = 13/547 (2%) Query: 38 DLTDPAAAQA-DDVSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGE 96 DL D AA D +L +TT VVVDL D ITEIGAVK+RGG +LGE Sbjct: 18 DLDDDAAGGGFGDRALFDTTLVVVDLETTGSDPAG------DRITEIGAVKIRGGEVLGE 71 Query: 97 FATLVDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFL 156 FATLVDP+RSIPPQIV LTGIT AM+ AP I+ VLP F EF S+LVAHNA FD+GFL Sbjct: 72 FATLVDPERSIPPQIVTLTGITHAMVSAAPRIEEVLPAFIEFARGSILVAHNARFDMGFL 131 Query: 157 RAAAGRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARA 216 R A R + +P LCTV +ARR+L REEAP+VRL+ALA LF V+ +PTHRALDDARA Sbjct: 132 RRNAQRLHLDFPFPLSLCTVTMARRILHREEAPTVRLSALADLFDVSVRPTHRALDDARA 191 Query: 217 TVEVLHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEV 276 TVEV H L+ERVGNQGVHS +L YLP P R KR LAD +P RPG+YLFRGPS EV Sbjct: 192 TVEVFHHLLERVGNQGVHSIRDLTEYLPRTDPQLRAKRHLADKIPARPGVYLFRGPSDEV 251 Query: 277 LYVGTAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAP 336 LYVGTAVDLRRRV YF G+D R R+ EMV LA VDHVEC+H LEA VRELR+L AHAP Sbjct: 252 LYVGTAVDLRRRVRSYFTGSDPRRRIGEMVRLAHRVDHVECSHGLEAAVRELRLLGAHAP 311 Query: 337 PYNRRSRFPHRWWWVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVR 396 YNR+S+ PHR WWV LT E FPRL V R+P D +GP +RT A A +++ G+R Sbjct: 312 AYNRKSKQPHRGWWVVLTAERFPRLKVSRSPSAD-TIGPVGNRTTAATIADVISAAAGLR 370 Query: 397 TCTKRLARSALHGPACPE---LEVSACPAT--RNVTAEGYADAAKRAADLIEGVDNTALT 451 TCT R H PE V C A+ R T Y AA L+ G D+ LT Sbjct: 371 TCTGRAGADGYHWCRLPEPGAATVGLCHASSRRPQTLTDYLPRVTAAAALMSGADDALLT 430 Query: 452 AAVHQVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQF 511 A +V + +E+AAR RD +A ++ L R Q DG G++F Sbjct: 431 ALADRVVAASAAQMFETAARHRDRLALTIDALARCQRLAALCAVAQLIVARPDGARGWEF 490 Query: 512 AVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPG 571 AVIRHG+LA AG +RRG PMPVVDAL A A+T++ PL GA EE AL+ RW+ P Sbjct: 491 AVIRHGRLAGAGVARRGVAPMPVVDALVASAETVIAGDGPLLGAAAEEAALLFRWITEPD 550 Query: 572 VRIVRVT 578 RIV T Sbjct: 551 ARIVACT 557 >tr|A4FAD3|A4FAD3_SACEN Tax_Id=405948 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Saccharopolyspora erythraea] Length = 572 Score = 528 bits (1361), Expect = e-148 Identities = 286/530 (53%), Positives = 341/530 (64%), Gaps = 9/530 (1%) Query: 49 DVSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIP 108 +V L E TFVVVDL + DA+TEIGAVKVRGG ++GEF TLVDP+R IP Sbjct: 17 EVPLNEVTFVVVDLETTGGS------NAQDAVTEIGAVKVRGGEVVGEFQTLVDPERDIP 70 Query: 109 PQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWP 168 P +V +TGIT AM+ DAP +DSVLP F EF SVLVAHNA FD GFLRA R + WP Sbjct: 71 PSVVTITGITEAMVRDAPRLDSVLPAFLEFCRGSVLVAHNAPFDTGFLRAGCERLGLRWP 130 Query: 169 GSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERV 228 KV+CTVRLARRVL+R+E P+ RL LA + T+P HRALDDARATV+VLHAL+ER+ Sbjct: 131 KPKVVCTVRLARRVLTRDETPNYRLGTLAGVLGARTEPVHRALDDARATVDVLHALLERL 190 Query: 229 GNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRR 288 G GV + +L +LP VTP QRRKR LAD LP+ G+YLFRGP+ EVLYVGTA DLRRR Sbjct: 191 GPIGVRTLEDLLGHLPDVTPLQRRKRGLADALPNASGVYLFRGPNEEVLYVGTATDLRRR 250 Query: 289 VSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRW 348 V QYF + R R+KEMV LA +DHV CAH LEA VRELR+LAAH P YNRRS+FP R Sbjct: 251 VRQYFTAGEKRSRIKEMVGLAERIDHVVCAHPLEAEVRELRLLAAHQPRYNRRSKFPQRA 310 Query: 349 WWVTLTDEAFPRLSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALH 408 WWV LTDE FPRLSVVR PR +GPF SR A E L T VR CT+R+ Sbjct: 311 WWVVLTDEPFPRLSVVRTPR-PTALGPFASRRAAAEAVDALQEATKVRRCTERIPARDPR 369 Query: 409 GPACP--ELEVSACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRY 466 G C EL+ A P +AE YA +D++ G+ L ++ L+ R+ Sbjct: 370 GRPCALYELQRCAAPCAGLQSAEDYAPEVIAISDVVAGLGTGVLHRLRAELERLSRAQRF 429 Query: 467 ESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSR 526 E AA RD +A V L RGQ DG GG+ AV+RHG+LAAAG +R Sbjct: 430 EDAAVHRDRLAALVRSLDRGQRLSALAAVPELVAARPDGRGGWHLAVVRHGRLAAAGTAR 489 Query: 527 RGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVR 576 RG PPMPVVD L A A+T+ PL GA +E ++ RWL T G R+VR Sbjct: 490 RGVPPMPVVDLLQASAETVTEGAGPLRGASPDEVRVVHRWLTTGGTRMVR 539 >tr|C8XCX1|C8XCX1_NAKMY Tax_Id=479431 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Nakamurella multipartita] Length = 613 Score = 494 bits (1272), Expect = e-137 Identities = 281/549 (51%), Positives = 340/549 (61%), Gaps = 23/549 (4%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPP-DAITEIGAVKVRGGVILGEFATLVDPQRSIPPQ 110 LRE TFVVVDL SP +AITEIGAVKVRGG +LGEFATLVDP R+IPPQ Sbjct: 44 LREVTFVVVDLETTGG-------SPATEAITEIGAVKVRGGQVLGEFATLVDPGRTIPPQ 96 Query: 111 IVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGS 170 I LTGIT AM+ DAP I SVLP F EF SVLVAHNA FD+GFLRAA R + WPG Sbjct: 97 ITMLTGITNAMVYDAPRISSVLPAFLEFARGSVLVAHNARFDVGFLRAACARQQVPWPGP 156 Query: 171 KVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGN 230 V+ TVRLAR+VL R EAPSVRL+ALA L T+P HRAL DARATV+VLHAL ER+G+ Sbjct: 157 AVVDTVRLARKVLPRAEAPSVRLSALAALLGARTRPDHRALTDARATVDVLHALFERLGS 216 Query: 231 QGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVS 290 GVHS AEL+ V P +RRKR LAD LP PG+YLFRGP EVLYVGT+ +L +RV Sbjct: 217 LGVHSLAELQDASRDVAPQRRRKRWLADRLPAAPGVYLFRGPREEVLYVGTSRNLAQRVR 276 Query: 291 QYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWW 350 YF A++R R+ +MVALA VDHVECAHALEA +RE R++A H PPYNRRSR P W Sbjct: 277 SYFTAAENRPRINQMVALAERVDHVECAHALEAHIREQRLIAVHQPPYNRRSRRPGGVCW 336 Query: 351 VTLTDEAFPRLSVVRAPRH--DRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALH 408 VTLTDEAFPRLS+VR P +GPF +R A L +R CT R+ R + Sbjct: 337 VTLTDEAFPRLSIVRQPPRGSPACLGPFPNRVAAQVAVEALQDVVPIRQCTTRIRRHSPD 396 Query: 409 GPACPELEVSAC--PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRY 466 G C E+ C P YA R +L++G + L ++ L+ R+ Sbjct: 397 GTPCVLAELGRCGSPCDGRQDELSYAREVARIVELVDGRSDQLLQLLRTRLLGLSADGRF 456 Query: 467 ESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSR 526 + AA RD ++ L R Q D GG++ V+RHG+ AAA ++R Sbjct: 457 DQAAVARDRLSALAAALDRRQRLGALAAIRELVVARPDERGGWELTVVRHGRFAAAAHAR 516 Query: 527 RGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADR 586 RG PMPVV+A+ A A+T+ P P PL A EET+ + RW+ PG R+VR Sbjct: 517 RGVDPMPVVEAMVASAETVHPGPGPLPAASAEETSTLLRWIERPGSRLVRA--------- 567 Query: 587 AESAGWTSP 595 SA W+SP Sbjct: 568 --SAPWSSP 574 >tr|D1A8X2|D1A8X2_THECU Tax_Id=471852 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Thermomonospora curvata DSM 43183] Length = 605 Score = 454 bits (1168), Expect = e-125 Identities = 271/553 (49%), Positives = 331/553 (59%), Gaps = 27/553 (4%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPD-AITEIGAVKVRGGVILGEFATLVDPQRSIPPQ 110 L + TFVVVDL SP D AITE+GAVKVRGG LGEFATLVDP IPP Sbjct: 39 LVDVTFVVVDLETTGG-------SPADSAITEVGAVKVRGGERLGEFATLVDPGVPIPPF 91 Query: 111 IVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGS 170 I LTGIT M+ +AP + +VLP F EF VLVAHNA FDIGFLRAA D WP Sbjct: 92 ITALTGITQQMVTNAPPMSAVLPAFLEFARGCVLVAHNAPFDIGFLRAACTAHDHPWPAF 151 Query: 171 KVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGN 230 V+ T LARRVL+REE P+ +LA LAR F T+P HRAL DARATV+VLH LIER+G+ Sbjct: 152 PVVDTADLARRVLTREEVPNCKLATLARYFRTGTEPCHRALADARATVDVLHGLIERLGS 211 Query: 231 QGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVS 290 GVHS ELRA+ TP QRRKR LADG+P PG+YLF GEVLYVG + DLR RV Sbjct: 212 YGVHSLEELRAFAKTPTPEQRRKRHLADGMPSAPGVYLFEDARGEVLYVGKSNDLRARVR 271 Query: 291 QYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWW 350 YF +++R R++EMV LA V + CA ALEA VRELR++A H P YNRRS+FP R W Sbjct: 272 SYFTASETRRRIREMVGLAERVRPIVCATALEAEVRELRLIAEHKPRYNRRSKFPERTLW 331 Query: 351 VTLT-DEAFPRLSVVRAPRHDRVV--GPFRSRTDATETAALLARFTGVRTCTKRLA-RSA 406 + LT E FPRLS+VR R ++ V GPF S A E A L +R CT+RL R Sbjct: 332 LKLTVGETFPRLSIVRDCRDEQAVYLGPFGSLRQAEEARAALHEAVPLRQCTQRLTPRLI 391 Query: 407 LHGPA--CPELEVSAC--PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAE 462 HG A C ++ C P +A+ Y + A ++EG + AA ++ LA Sbjct: 392 AHGRARTCALGQIGRCGAPCEGRQSADVYLRHVETARSIMEGDVRPVVAAARVRIDRLAV 451 Query: 463 RHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAA 522 + RYE AA RD +A V RGQ GG++ AV+RHG+LAAA Sbjct: 452 QLRYEEAAAQRDRLAAFVRAAARGQRLAALARCPQLVAARPAFGGGWELAVVRHGRLAAA 511 Query: 523 GNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEH 582 G +G P P V+A A A+T++P P P+GGA+ EE + RWL PG R+V + GT Sbjct: 512 GTVPQGASPWPHVEAAVATAETVIPGPGPVGGAIPEEVECVLRWLEGPGTRLVELEGT-- 569 Query: 583 TADRAESAGWTSP 595 W+SP Sbjct: 570 ---------WSSP 573 >tr|Q0RFJ5|Q0RFJ5_FRAAA Tax_Id=326424 SubName: Full=Putative DNA-directed DNA polymerase; EC=2.7.7.7;[Frankia alni] Length = 580 Score = 444 bits (1141), Expect = e-122 Identities = 262/533 (49%), Positives = 319/533 (59%), Gaps = 14/533 (2%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQI 111 L + TFVVVDL + ITEIGAV+VRGG +L E +TLV P IPP + Sbjct: 16 LSDLTFVVVDLETTGTS------AATSEITEIGAVRVRGGEVLAEMSTLVRPSAGIPPMV 69 Query: 112 VRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSK 171 +TGIT AM+ AP V+P F EF +VLVAHNA FD+GFLRAAA RC P + Sbjct: 70 SVITGITDAMVATAPAEAEVVPTFLEFARGAVLVAHNAPFDLGFLRAAAQRCGYPPPAWE 129 Query: 172 VLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQ 231 L T+R+ARR++SR+EAP RLA+LARLF +T+P HRAL DARATV+VLH L ER+GN Sbjct: 130 HLDTLRIARRLVSRDEAPDCRLASLARLFRSSTEPCHRALADARATVDVLHGLFERLGNA 189 Query: 232 GVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQ 291 GV + EL Y V+PAQRRKR LADGLP PG+Y+FR G LYVGT+ +R RV Sbjct: 190 GVRTLEELHEYSARVSPAQRRKRYLADGLPTGPGVYIFRDADGRALYVGTSRSVRSRVRT 249 Query: 292 YFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWV 351 YF ++ R RM EMVALA VD + CAHALEA VRELR++A H PPYNRRSRFP R ++ Sbjct: 250 YFTASEPRTRMAEMVALAERVDAIGCAHALEAEVRELRLIAEHKPPYNRRSRFPERTVYL 309 Query: 352 TLTDEAFPRLSVVRAPRHDRV-VGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGP 410 LTDE FPRLS VRA R + +GPF S A + A L +R CT RL+ A P Sbjct: 310 KLTDEPFPRLSRVRAARDEATYLGPFASTRGADDAADALLAAVPLRQCTGRLSPRA-RRP 368 Query: 411 ACPELEVSACPA----TRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRY 466 AC ++ C A +V A AA RAA I G + A+ ++ LA RY Sbjct: 369 ACALADLGRCGAPCDGREDVAAYARHVAAARAA--ITGDPGPVIAASTRRIDRLAGERRY 426 Query: 467 ESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSR 526 E AA RD + + V RGQ G+ AV+RHG+L +A N Sbjct: 427 EEAAVHRDRMVSFVRAAARGQRLAALTRIPQLVAAAPTAQAGWDLAVVRHGRLVSAANVA 486 Query: 527 RGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTG 579 G P P VDA A A+T+ P P P A VEET IARWLA GVR+VR+ G Sbjct: 487 PGIDPRPWVDAAVASAETVRPQPGPAPCASVEETERIARWLAGSGVRLVRLDG 539 >tr|C1RG85|C1RG85_9CELL Tax_Id=446466 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Cellulomonas flavigena DSM 20109] Length = 631 Score = 432 bits (1111), Expect = e-119 Identities = 274/590 (46%), Positives = 325/590 (55%), Gaps = 36/590 (6%) Query: 6 PNVTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVVDLXXX 65 P V A GATG Q++L L GT L+D TFVVVDL Sbjct: 38 PEVPAPGATG-VQVALDEL-----------GTPLSD-------------VTFVVVDLETT 72 Query: 66 XXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDA 125 + DAITEIGAVKVRGG +LGEF TLVDP +PP I LTGITT+ML A Sbjct: 73 GGR------AAEDAITEIGAVKVRGGEVLGEFQTLVDPGGPVPPFIQVLTGITTSMLVGA 126 Query: 126 PTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSR 185 PTI VLP F EF +VLVAHNA FD+GFLRAAA R + AWPG +V+ TVRLARRV+ R Sbjct: 127 PTIGEVLPSFLEFARGAVLVAHNAPFDVGFLRAAAARSERAWPGFQVVDTVRLARRVVLR 186 Query: 186 EEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPG 245 +EAP+ +L+ LA LF P HRAL DARATV+VLHAL+ R+ GV +L Sbjct: 187 DEAPNHKLSTLAALFGATVTPNHRALADARATVDVLHALLGRLAPLGVTHLEDLATATDP 246 Query: 246 VTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVG-TAVDLRRRVSQYFNGADSRGRMKE 304 V RR+ LADGLP PG+YLFRGP EVLYVG + LRRRV YF A+ RGRM+E Sbjct: 247 VPADVRRRSTLADGLPDAPGVYLFRGPRDEVLYVGVSTTSLRRRVRSYFTSAEKRGRMQE 306 Query: 305 MVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVV 364 MV LA VD V CA LEA VRELR++A HAP YNRRSR P R WV LTDE FPRLSVV Sbjct: 307 MVRLAVRVDPVVCATPLEARVRELRLIAEHAPRYNRRSRAPERMPWVRLTDEPFPRLSVV 366 Query: 365 RAPRHDRV-VGPFRSRTDATETAALLARFTGVRTCTKRL-ARSALHGPACPELEVSAC-- 420 R R R +GPF SR A + L VR CT RL + AC EV C Sbjct: 367 REVREGRAHIGPFASRALAQQAVDALHATFPVRQCTGRLPVVPSADAHACVLAEVGRCGA 426 Query: 421 PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAV 480 P T YA A D + G A ++ LA + R+E AA +RD + + V Sbjct: 427 PCTGGQDVAAYAPVAAAVRDAMTGDPRDVAQAHAVRIRTLAAQERFEEAATVRDRLTSYV 486 Query: 481 EVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHA 540 R Q GG++ ++RHG+ A R T P P V AL A Sbjct: 487 RGAGRAQRHARAAACRELVAARRTDDGGWELLLVRHGRFAGTAVVDRRTDPRPAVAALRA 546 Query: 541 GAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESA 590 G + + + P A EET L+ WL PGVR+V V G + R+ A Sbjct: 547 GGEHVTASVPPATAAHPEETDLLLAWLEQPGVRLVEVDGEWSSPARSAQA 596 >tr|C0U9G6|C0U9G6_9ACTO Tax_Id=526225 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Geodermatophilus obscurus DSM 43160] Length = 609 Score = 429 bits (1103), Expect = e-118 Identities = 265/565 (46%), Positives = 319/565 (56%), Gaps = 17/565 (3%) Query: 24 LDPAAFADIAL---PGTDLTDPAAAQADDVSLRETTFVVVDLXXXXXXXXXXXXSPPD-A 79 L PA A A G + A L E TFVVVDL SP D A Sbjct: 3 LSPARLAGTAARAAAGLPRFEQATIDELGTPLAEVTFVVVDLETTGG-------SPKDSA 55 Query: 80 ITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFV 139 ITEIGAVKVRGG +LGEF TLVDP IPP I LTGIT+ M+ AP I +VLP F EF Sbjct: 56 ITEIGAVKVRGGEVLGEFQTLVDPGCEIPPYISVLTGITSTMVAAAPRIGAVLPHFLEFA 115 Query: 140 GNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARL 199 +VLVAHNA FD+GFL+AA I WP + + T LARR+LSR+E P+ +LA LA Sbjct: 116 RGAVLVAHNAPFDLGFLKAACAANGIPWPATASVDTAVLARRLLSRDEVPNCKLATLAPY 175 Query: 200 FSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADG 259 F +T+P HRAL DARATV+VLH L ER+G G+ S EL V P + RKR LAD Sbjct: 176 FRTSTEPCHRALADARATVDVLHGLFERLGPLGITSLEELTGLTRQVDPDRLRKRHLADA 235 Query: 260 LPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAH 319 +PH PG+YLFRGP E LYVGT+ DLR RV YF + R RM EMVAL+ VD + CAH Sbjct: 236 VPHGPGVYLFRGPRDEPLYVGTSTDLRSRVRSYFTAGEQRSRMTEMVALSQRVDAIPCAH 295 Query: 320 ALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVRAPRHDRVV--GPFR 377 LEA VRELR++A H P YNRRSRFP R WV LT+E FPRLSVVR R V GPF Sbjct: 296 DLEAAVRELRLIAEHKPRYNRRSRFPERALWVRLTEEPFPRLSVVRRVRPGAGVFLGPFP 355 Query: 378 SRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSAC--PATRNVTAEGYADAA 435 R A A + +R CT RL+ L G AC + C P T + E Y A Sbjct: 356 DRRAADAAVAAVHESLPLRQCTGRLSVRVL-GTACALAGMGRCGAPCTGAQSVEEYGGIA 414 Query: 436 KRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXX 495 + + L + +V LA RYE AA LRD AT V + R Q Sbjct: 415 AVLRTAVAADPHALLAPLLARVERLAAEERYEDAAVLRDRAATLVRAVRRRQRLESLAAV 474 Query: 496 XXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGA 555 DG GG+Q +++R G+L AAG + RG+ ++ L A A+T L L A Sbjct: 475 PELVLARPDGEGGWQLSIVRRGRLVAAGCAARGSSVRATLEGLLATAETPLGPDGEL-AA 533 Query: 556 LVEETALIARWLATPGVRIVRVTGT 580 V+ET L+ RW+ PG R+V+V GT Sbjct: 534 SVDETELVLRWMEKPGTRLVQVDGT 558 >tr|A4X9Y0|A4X9Y0_SALTO Tax_Id=369723 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Salinispora tropica] Length = 607 Score = 427 bits (1099), Expect = e-117 Identities = 256/564 (45%), Positives = 319/564 (56%), Gaps = 29/564 (5%) Query: 41 DPAAAQADD-VSLRETTFVVVDLXXXXXXXXXXXXSPPDA--ITEIGAVKVRGGVILGEF 97 DPA D + L TTFVVVDL PD ITEIGAVKVRGG LG Sbjct: 37 DPAVGGVDPALPLYATTFVVVDLETTG--------GTPDGGGITEIGAVKVRGGEQLGVL 88 Query: 98 ATLVDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVG-NSVLVAHNAGFDIGFL 156 ATLV+P +PP + LTGIT +ML AP I VLP F EF+ ++VLVAHNA +D+GFL Sbjct: 89 ATLVNPGTPVPPFVTVLTGITQSMLLPAPPITEVLPSFLEFLPPDAVLVAHNAPYDVGFL 148 Query: 157 RAAAGRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARA 216 +AA WP +VL T LARRVL+R+E P+ RL LA F AT+PTHRALDDA A Sbjct: 149 KAACAAHGYRWPSPRVLDTAALARRVLTRDEVPNRRLGTLAAYFRTATRPTHRALDDALA 208 Query: 217 TVEVLHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEV 276 TV+VLH LI R+G VH+ E + VTP QRRKR LA+GLPH PG+YLFRG Sbjct: 209 TVDVLHGLISRLGGHRVHTIGEAIEFARAVTPTQRRKRHLAEGLPHSPGVYLFRGADNRP 268 Query: 277 LYVGTAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAP 336 LYVGT++D+ RV YF A+ R R+ EM+A A V+ VECAH+LEA VRELR++ HAP Sbjct: 269 LYVGTSIDIATRVRSYFTAAEKRARISEMLAAAERVEAVECAHSLEAEVRELRLIGTHAP 328 Query: 337 PYNRRSRFPHRWWWVTLTDEAFPRLSVVR--APRHDRVVGPFRSRTDATETAALLARFTG 394 PYNRRS+FP R W+ LTDEA+PRLSVVR AP + +GPF SR A AA Sbjct: 329 PYNRRSKFPERVVWLKLTDEAYPRLSVVRNLAPGDEAYLGPFTSRRAAELAAAGFHDAMP 388 Query: 395 VRTCTKRLARSALHGPACPELEVSACPA--TRNVTAEGYADAAKRAADLIEGVD-NTALT 451 +R CT RL+ + PAC E+ CPA +T YAD A G D + Sbjct: 389 LRQCTHRLSVRKV-TPACAVAELGRCPAPCEHRITPTEYADRATTPFRRACGDDPQGVVD 447 Query: 452 AAVHQVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQF 511 A + ++ L+ RYE AA +R + + + R Q GG++ Sbjct: 448 ALLGRIETLSAGQRYEEAAVVRSRLTAVLRAITRMQRLAALTGIAEVVAARPASDGGWEL 507 Query: 512 AVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPG 571 A++RHG+LA AG S G P P + + A A+T+ P P EET I WL P Sbjct: 508 ALVRHGRLAGAGVSPPGVHPRPTIATIRATAETVSPGHGPTPATSAEETERILSWLERPE 567 Query: 572 VRIVRVTGTEHTADRAESAGWTSP 595 R+V + S+ W SP Sbjct: 568 TRLVEM-----------SSAWASP 580 >tr|A3TK98|A3TK98_9MICO Tax_Id=313589 SubName: Full=Putative uncharacterized protein;[Janibacter sp. HTCC2649] Length = 572 Score = 427 bits (1098), Expect = e-117 Identities = 250/534 (46%), Positives = 318/534 (59%), Gaps = 15/534 (2%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDA-ITEIGAVKVRGGVILGEFATLVDPQRSIPPQ 110 L + TFVVVDL SP + ITEIGAVKVR G +LGEF T V+P + IP Sbjct: 15 LSDVTFVVVDLETTGG-------SPSECGITEIGAVKVRAGEVLGEFQTFVNPGQPIPAF 67 Query: 111 IVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGS 170 I LTGIT AM+ DAP ++ L F EF SVLVAHNAGFD+ FL+AA GR + WP Sbjct: 68 ISVLTGITDAMVRDAPRVEPALVAFLEFAAGSVLVAHNAGFDVSFLKAACGRAERDWPSF 127 Query: 171 KVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGN 230 V+ TV LAR++++R+EAP+ RL +LA LF T P HRAL DARATV+VLH LI RVG+ Sbjct: 128 PVVDTVHLARQLVTRDEAPNHRLGSLAVLFGATTTPDHRALHDARATVDVLHGLIARVGS 187 Query: 231 QGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVS 290 GVHS EL+AY V A RRKR LADGLP PG+YLF+ G VLYVGT+V +R RV Sbjct: 188 LGVHSLEELKAYSSRVPAATRRKRHLADGLPEAPGVYLFKDGQGRVLYVGTSVSIRTRVR 247 Query: 291 QYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWW 350 YF ++ R RM EMV +A +V + CA LEA VRELR++ H P YNR+SR P R WW Sbjct: 248 SYFTASEKRRRMSEMVRIAESVTPIVCATPLEAEVRELRLIKEHKPRYNRKSRHPERSWW 307 Query: 351 VTLTDEAFPRLSVVRAPRHD--RVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALH 408 V LT E FPRLS+VR D R +GPF SR A + A + +R C +RL+ + Sbjct: 308 VKLTVEPFPRLSIVRDVADDDTRYIGPFASRGSADDAVAAVHEVLPLRQCLERLSATKPR 367 Query: 409 GPACPELEVSAC--PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRY 466 AC ++ C P T + E YA A L+ G ++A++ ++ LAE+ R+ Sbjct: 368 S-ACALADMGRCGAPCTGAQSVEDYAAVVAEAVALLAGDASSAVSTWRERMDHLAEQERF 426 Query: 467 ESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSR 526 E A +RD + + V R Q GG++ IRHG+LA + S Sbjct: 427 EDAGIVRDRMLSLVRGASRAQRLDPLSRTAELVAARRSETGGWEVMCIRHGRLAGSTLSP 486 Query: 527 RGTPPMPVVDALHAGAQTILPAP-APLGGALVEETALIARWLATPGVRIVRVTG 579 RG PMP V+AL A A+ ++PAP P A EE+ I RWL PGVR+V + G Sbjct: 487 RGADPMPYVEALRASAE-VVPAPLPPATSATPEESERILRWLDAPGVRVVDIDG 539 >tr|A8LYB2|A8LYB2_SALAI Tax_Id=391037 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Salinispora arenicola] Length = 585 Score = 426 bits (1096), Expect = e-117 Identities = 256/564 (45%), Positives = 322/564 (57%), Gaps = 29/564 (5%) Query: 41 DPAAAQAD-DVSLRETTFVVVDLXXXXXXXXXXXXSPPDA--ITEIGAVKVRGGVILGEF 97 DPA D ++ L TTFVVVDL PD ITEIGAVKVRGG LG Sbjct: 15 DPAVGGVDPELPLYATTFVVVDLETTG--------GAPDGGGITEIGAVKVRGGEQLGVL 66 Query: 98 ATLVDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVG-NSVLVAHNAGFDIGFL 156 ATLV+P +PP + LTGIT AML AP+I VLP F EF+ ++VLVAHNA +D+GFL Sbjct: 67 ATLVNPGVPVPPFVTVLTGITQAMLLPAPSIAQVLPSFLEFLSADAVLVAHNAPYDVGFL 126 Query: 157 RAAAGRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARA 216 +AA WP ++L T LARRVLSR+E P+ RL LA F +TQPTHRALDDA+A Sbjct: 127 KAACAAHGHRWPNPRILDTAALARRVLSRDEVPNRRLGTLAAYFRTSTQPTHRALDDAKA 186 Query: 217 TVEVLHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEV 276 TV+VLH LI R+G VH+ E + VTP QRRKR LA+GLP PG+YLFRG Sbjct: 187 TVDVLHGLIARLGGHRVHTIGEAIEFARAVTPTQRRKRHLAEGLPRTPGVYLFRGADDRP 246 Query: 277 LYVGTAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAP 336 LYVGT+VD+ RV YF A+ R R+ EM+A A V+ VECAH+LEA VRELR++ AHAP Sbjct: 247 LYVGTSVDIATRVRSYFTAAEKRARISEMLAAAVRVEAVECAHSLEAEVRELRLIGAHAP 306 Query: 337 PYNRRSRFPHRWWWVTLTDEAFPRLSVVR--APRHDRVVGPFRSRTDATETAALLARFTG 394 PYNRRS+FP R W+ LTDEA+PRLSVVR P + +GPF SR A AA Sbjct: 307 PYNRRSKFPERVVWLKLTDEAYPRLSVVRKLTPGDEAYLGPFTSRRAAELAAAGFHDAMP 366 Query: 395 VRTCTKRLARSALHGPACPELEVSACPA--TRNVTAEGYAD-AAKRAADLIEGVDNTALT 451 +R CT RL+ + PAC E+ CPA +T + YA+ A G + Sbjct: 367 LRQCTHRLSVRTV-TPACALAELGRCPAPCEHRITPDEYANRAVTPFRTACRGDPQGVVD 425 Query: 452 AAVHQVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQF 511 A + ++ L+ RYE AA +R + + R Q GG++ Sbjct: 426 ALLGRIETLSTGQRYEEAAVVRSRLTAVLRATTRMQRLAALTGIGEVAAARPAVGGGWEL 485 Query: 512 AVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPG 571 A++R+G+LA AG S G P P + + A A+T+ P P A EET I WL P Sbjct: 486 ALVRYGRLAGAGVSPPGVHPRPTIATIRATAETVTPGLGPTPAASAEETERILSWLERPE 545 Query: 572 VRIVRVTGTEHTADRAESAGWTSP 595 R+V + S+GW SP Sbjct: 546 TRLVEM-----------SSGWASP 558 >tr|C4RLP2|C4RLP2_9ACTO Tax_Id=219305 SubName: Full=Putative uncharacterized protein;[Micromonospora sp. ATCC 39149] Length = 604 Score = 424 bits (1091), Expect = e-116 Identities = 267/595 (44%), Positives = 331/595 (55%), Gaps = 41/595 (6%) Query: 8 VTAMGATGGTQLSLTGLDPAAFADIALPGTDLTDPAAAQADDVSLRETTFVVVDLXXXXX 67 V +G Q +L GL AA GT + DPA + L TTFVVVDL Sbjct: 17 VPRVGGAEYVQQALAGLGQAA-------GTGV-DPA------LPLYATTFVVVDLETTG- 61 Query: 68 XXXXXXXSPPDA--ITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDA 125 PD ITEIGAVKVRGG LG ATLV+P IPP I LTGIT AML A Sbjct: 62 -------GAPDGGGITEIGAVKVRGGEELGVLATLVNPGVPIPPFITVLTGITQAMLVPA 114 Query: 126 PTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSR 185 P I+ VLP F EFV ++VLVAHNA +D+GFL+AA R WP +VL T LARRVL R Sbjct: 115 PPIEQVLPSFLEFVADAVLVAHNAPYDVGFLKAACARHGYRWPNPRVLDTAALARRVLGR 174 Query: 186 EEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPG 245 +E P+ +L LA F AT+PTHRALDDA+ATV+VLH LI R+G V + E + Sbjct: 175 DEVPNRKLGTLASYFRTATRPTHRALDDAKATVDVLHGLIARLGGHRVDTVGEAIEFARA 234 Query: 246 VTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEM 305 VTP QRRKR LADGLP PGIY+FR LYVGT+ D+ RV YF A+ R RM EM Sbjct: 235 VTPTQRRKRHLADGLPKVPGIYIFRAADDRPLYVGTSGDIATRVRSYFTAAEKRARMSEM 294 Query: 306 VALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVR 365 +A A V+ +ECAH+LEA VRELR++ AHAPPYNRRS+FP R W+ LTD +PRLSVVR Sbjct: 295 LAAAERVEAIECAHSLEAEVRELRLIGAHAPPYNRRSKFPERMVWLKLTDGPYPRLSVVR 354 Query: 366 --APRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSACPA- 422 A + +GPF S+ A AA +R CT RL+ + PAC E+ CPA Sbjct: 355 SLADGDEVYLGPFGSQRAAELAAAGFHDALPLRQCTHRLSLRTV-TPACALAELGRCPAP 413 Query: 423 -TRNVTAEGYADAAKRAADLIEGVDNTALT-AAVHQVSDLAERHRYESAARLRDHIATAV 480 +T YAD A D A+ A + ++ LA RYE AA +R +A + Sbjct: 414 CEHRITPGEYADRAVAPFRAATATDPGAVVDALLARIGALAADQRYEEAAVVRARLAAVL 473 Query: 481 EVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHA 540 R Q GG++ A++RHG+LA AG S G P ++ + A Sbjct: 474 RATVRMQRLTALAGIAELAAARPAARGGWELALVRHGRLAGAGVSPPGMHPRSTIELIRA 533 Query: 541 GAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTADRAESAGWTSP 595 A+T+ P P P+ A EE+ I WL P R+V + S+GW SP Sbjct: 534 TAETVPPGPGPVPRASAEESERILSWLERPETRLVEM-----------SSGWASP 577 >tr|C4EAR2|C4EAR2_STRRS Tax_Id=479432 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Streptosporangium roseum DSM 43021] Length = 570 Score = 418 bits (1074), Expect = e-114 Identities = 250/537 (46%), Positives = 323/537 (60%), Gaps = 20/537 (3%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQI 111 L + TFVV DL + AITEIGAVKVRGG +LGEF TLVDP IPP I Sbjct: 12 LSQITFVVFDLETTGVS------AGEHAITEIGAVKVRGGEVLGEFGTLVDPGSPIPPFI 65 Query: 112 VRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSK 171 LTGIT M+ AP I+SVLP F EF + LVAHNAGFD+GF++AA P Sbjct: 66 SVLTGITDTMVVAAPKIESVLPSFLEFAEGTTLVAHNAGFDLGFIKAACAAHGYPPPAHP 125 Query: 172 VLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQ 231 V+ TV LAR++L+R+EAP+ +L+ LAR+FS T+P HRAL DA+ATV+VLHAL+ER G+ Sbjct: 126 VVDTVVLARKLLTRDEAPNCKLSTLARIFS-KTEPRHRALADAQATVDVLHALLERAGSF 184 Query: 232 GVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQ 291 GVH+ ELR ++ TP QRRKR LADG+P PG+Y+F G+ LYVG + +LR RV Sbjct: 185 GVHTLEELRGFVRAPTPEQRRKRHLADGVPTGPGVYVFEDERGDPLYVGKSTNLRNRVRS 244 Query: 292 YFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWV 351 YF ++R R++EM+ + V + CA ALEA VRELR++ + P YNRRSRFP + W+ Sbjct: 245 YFTAGETRPRIREMIGIVERVRPIACATALEAEVRELRLIGSAKPRYNRRSRFPEKMVWL 304 Query: 352 TLTDEAFPRLSVVRAPRHDRV--VGPFRSRTDATETAALLARFTGVRTCTKRLARSALHG 409 LTDE FPRLS+VR + D +GPF S A + L +R CT+++ S Sbjct: 305 KLTDEPFPRLSIVREVKDDDAGYLGPFTSTRAAEDARTALHEAVPLRQCTEKIT-SRTRR 363 Query: 410 PACPELEVSAC--PATRNVTAEGY---ADAAKRAADLIEGVDNTALTAAVH-QVSDLAER 463 AC + C P +AE Y AA+RA +L D T + +AV ++ LA Sbjct: 364 SACALAGLGRCGAPCEGRQSAEEYGLHTAAARRAMEL----DVTPVFSAVQARMERLALE 419 Query: 464 HRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAG 523 RYE AA RD +A+ V R Q GG+Q VIR+G+LA+AG Sbjct: 420 QRYEEAAADRDRLASYVRASARMQRLSALTSIPQMVAASPAAGGGWQIHVIRYGRLASAG 479 Query: 524 NSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGT 580 RG P P VDAL A A+T++P P P+ A EET I RWL +PGVR+V+V GT Sbjct: 480 VMPRGAHPTPFVDALVATAETVVPGPGPVPAASAEETECILRWLESPGVRLVQVEGT 536 >tr|Q2J8D1|Q2J8D1_FRASC Tax_Id=106370 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Frankia sp.] Length = 584 Score = 417 bits (1071), Expect = e-114 Identities = 254/545 (46%), Positives = 312/545 (57%), Gaps = 16/545 (2%) Query: 42 PAAAQADDVS--LRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFAT 99 P + DD+ L + TFVV DL D ITEIGAV+VRGG IL E AT Sbjct: 13 PRQGRLDDLGRPLADVTFVVFDLETTGTSPGR------DEITEIGAVRVRGGRILAEMAT 66 Query: 100 LVDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAA 159 LV P IPP + LTGIT M+ AP + VLP F EF +VLVAHNA FD+GFLRAA Sbjct: 67 LVRPGVGIPPMVSVLTGITDVMVATAPPVTQVLPTFLEFARGAVLVAHNAPFDLGFLRAA 126 Query: 160 AGRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVE 219 C P + L T+R+ARRV++R+E+P RL +LA LF +P HRAL DARATV+ Sbjct: 127 VELCGYPVPVWEYLDTLRIARRVVTRDESPDCRLTSLASLFRSPVEPRHRALADARATVD 186 Query: 220 VLHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYV 279 VLH L ER+GN GV + +L Y V+PAQRRKR LADGLP PG+Y+FR LYV Sbjct: 187 VLHGLFERLGNAGVTTLEDLHDYSSRVSPAQRRKRHLADGLPTGPGVYIFRDADERALYV 246 Query: 280 GTAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYN 339 GT+ +R RV YF ++ R RM MVALA VD + CAHALEA VRELR++A + PPYN Sbjct: 247 GTSRSVRSRVRTYFTASEPRTRMAAMVALAERVDAIGCAHALEAEVRELRLIAEYKPPYN 306 Query: 340 RRSRFPHRWWWVTLTDEAFPRLSVVRAPRHDRV-VGPFRSRTDATETAALLARFTGVRTC 398 RRSRFP R ++ LTDE FPRLS VRA R D +GPF S A A L +R C Sbjct: 307 RRSRFPERSVYLKLTDEPFPRLSRVRAARDDATYLGPFGSVRAADAAAEALLAAVPLRQC 366 Query: 399 TKRLARSALHGPACPELEVSACPA----TRNVTAEGYADAAKRAADLIEGVDNTALTAAV 454 + RL+ + AC ++ C A +V + G AA RAA I G + A+ Sbjct: 367 SGRLS-PRVRRSACTLADLGRCGAPCDGREDVASYGRHVAAARAA--ITGDPGRVIAAST 423 Query: 455 HQVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVI 514 ++ LA RYE AA RD + V R Q G+ AV+ Sbjct: 424 RRIDRLAAERRYEEAAVQRDRMIAFVRAAARAQRLSALTGVAELVAAAPTAEAGWDLAVV 483 Query: 515 RHGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRI 574 RHG+L +A + G P P VDA A A+T+ P P P A VEET IARWL PGVR+ Sbjct: 484 RHGRLVSAASVPPGVDPRPWVDAAVASAETVRPRPGPAPCASVEETERIARWLGGPGVRL 543 Query: 575 VRVTG 579 VR+ G Sbjct: 544 VRLEG 548 >tr|A8LFE8|A8LFE8_FRASN Tax_Id=298653 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Frankia sp.] Length = 603 Score = 414 bits (1063), Expect = e-113 Identities = 258/538 (47%), Positives = 316/538 (58%), Gaps = 24/538 (4%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDA-ITEIGAVKVRGGVILGEFATLVDPQRSIPPQ 110 L + TFVVVDL SP + ITEIGAV+VRGG ILGE ++LV P IP Sbjct: 24 LSDLTFVVVDLETTGG-------SPATSEITEIGAVRVRGGQILGEMSSLVRPSAPIPAF 76 Query: 111 IVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGS 170 I LTGIT AM+ AP I V+P F EF +VLVAHNA FD+GFLRAAA C P Sbjct: 77 ISVLTGITGAMVATAPGIGEVVPTFLEFARGAVLVAHNAPFDLGFLRAAATACGYPAPAW 136 Query: 171 KVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGN 230 + L TVR+ARRV+SR+E RL++LA LF ATQP HRAL DARATV+VLH L ER+GN Sbjct: 137 EHLDTVRIARRVISRDETRDCRLSSLAALFGSATQPNHRALADARATVDVLHGLFERLGN 196 Query: 231 QGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVS 290 GV + +L Y V+PAQRRKR LAD LP PG+Y+FR +G LYVGT+ +R RV Sbjct: 197 LGVTTIEDLHEYSARVSPAQRRKRHLADDLPTGPGVYVFRDGTGRPLYVGTSRSVRSRVR 256 Query: 291 QYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWW 350 YF ++ R RM EMVA+A VD +ECAHALEA VRELR++A + PPYNRRSRFP R + Sbjct: 257 TYFTASEPRTRMAEMVAIAERVDAIECAHALEAEVRELRLIAEYKPPYNRRSRFPERAVY 316 Query: 351 VTLTDEAFPRLSVVRAPRHD-RVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHG 409 + LTDE FPRLS VR+ +GPF S A A L +R C+ RL+ Sbjct: 317 LRLTDEPFPRLSRVRSVGDGVTSLGPFGSAAAAESAATALLEAIPLRQCSTRLS-PRRPT 375 Query: 410 PACPELEVSACPATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAER------ 463 AC E+ C A + EG A+ + A A+TA V D+ ER Sbjct: 376 AACALAELGRCGAPCD-GREGVAEYGQHVA-----TARGAMTADPRPVVDVLERRIARLS 429 Query: 464 --HRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAA 521 RYE AA +RD +A V + R Q G+ AV+R G+L + Sbjct: 430 ADQRYEEAAGVRDRLAAYVRAVARMQRLTALTCIDELVAAAPTADAGWDLAVVRRGRLVS 489 Query: 522 AGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTG 579 A + RGT P P VDA+ A A+T+ P P P A VEET I RWLA PGVR+VR+ G Sbjct: 490 AASVPRGTDPRPWVDAVVASAETVRPLPGPTPCASVEETERIGRWLAGPGVRLVRLDG 547 >tr|A0LTI1|A0LTI1_ACIC1 Tax_Id=351607 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Acidothermus cellulolyticus] Length = 566 Score = 412 bits (1060), Expect = e-113 Identities = 244/538 (45%), Positives = 306/538 (56%), Gaps = 13/538 (2%) Query: 49 DVSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIP 108 D LR+ TFVVVDL AITE+ AVKVRGG +LGE TLV+P R IP Sbjct: 18 DTPLRDVTFVVVDLETTGGAPGTG------AITELAAVKVRGGEVLGELQTLVNPGRPIP 71 Query: 109 PQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWP 168 P I LTGIT AM+ AP ID+VLP F EF SVLVAHNA FD+GFLRAA WP Sbjct: 72 PFITVLTGITDAMVAPAPPIDAVLPTFLEFATGSVLVAHNAPFDVGFLRAACAAAGYDWP 131 Query: 169 GSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERV 228 +VL T RLARRVL+REEAP+ LA LAR+F T P HRAL D AT++VLH L+ER+ Sbjct: 132 EFEVLDTARLARRVLTREEAPNCTLATLARVFRAKTTPNHRALADVYATIDVLHGLLERL 191 Query: 229 GNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRR 288 G+ GV S A++R + VT QR+KR LA+ LPH PG+YLFR G VLYVG A DLR+R Sbjct: 192 GSFGVGSLADVRTFSAKVTATQRQKRHLAERLPHAPGVYLFRDRQGRVLYVGKAKDLRQR 251 Query: 289 VSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRW 348 V YF A++RGR+ +M+ +A V + CA LEA +RE+R++A H P YNRRS+FP R Sbjct: 252 VRSYFTAAETRGRIVDMLRVAEDVTPIVCATELEAEIREVRLIAEHKPAYNRRSKFPERT 311 Query: 349 WWVTLTDEAFPRLSVVRAPRHDRV--VGPFRSRTDATETAALLARFTGVRTCTKRLARSA 406 WWV LTDE FPRL+VV R+D +GPF R A L +R C RL Sbjct: 312 WWVKLTDERFPRLAVVHTVRNDAATYLGPFNVRESALLAVEALQDAFPIRRCPDRLG-PR 370 Query: 407 LHGPACPELEVSAC--PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERH 464 P C E+ C P T + + Y + + + AA+ +++ LA Sbjct: 371 TRRPPCAWFELGRCGAPCTGAQSPDAYRSVVAAVHRAMTSDPSEVVAAALRRITPLAAAQ 430 Query: 465 RYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGN 524 RYE A +RD + + + R Q G + AVIRHG+LA AG Sbjct: 431 RYEEAVPIRDRLVAYLHAVGRAQRLAALAGCRQIVAARPGPDGAWDVAVIRHGRLAGAGL 490 Query: 525 SRRGTPPMP-VVDALHAGAQTILPAPAPLGG-ALVEETALIARWLATPGVRIVRVTGT 580 G P + + A+ A A T LP + A EE L+ RWL PGVR++ V GT Sbjct: 491 IPAGEPEVDRQLTAIVATASTSLPRGVGITAYADAEEMELLLRWLDQPGVRLLDVEGT 548 >tr|D1BTP4|D1BTP4_9MICO Tax_Id=446471 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Xylanimonas cellulosilytica DSM 15894] Length = 584 Score = 412 bits (1059), Expect = e-113 Identities = 243/539 (45%), Positives = 309/539 (57%), Gaps = 17/539 (3%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQI 111 LRE TFVVVDL + ITEIGAVKVRGG +LGEF +LV+P R +P + Sbjct: 28 LREVTFVVVDLETTGTR------TTDSGITEIGAVKVRGGEVLGEFQSLVNPGREVPAFV 81 Query: 112 VRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSK 171 RLTGITTAM+ AP+ID VLP F E+ + VLVAHNA FD+GFL+AAA WPG Sbjct: 82 ARLTGITTAMVSTAPSIDLVLPSFLEWAHDCVLVAHNAPFDVGFLKAAAAGLGYPWPGFP 141 Query: 172 VLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQ 231 V+ TV LARRV+ ++EAP+ +LA LA LF P HRAL DARATV+VLH L++R+G Sbjct: 142 VVDTVPLARRVVPKDEAPNHKLATLAHLFRARVTPEHRALADARATVDVLHGLLDRLGAM 201 Query: 232 GVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQ 291 GV +L V P R+KR LADGLP PG+YLF+GP EVLYVGT+ ++R+RV Sbjct: 202 GVQHLEDLATAADPVPPDVRKKRHLADGLPEAPGVYLFKGPGDEVLYVGTSTNIRKRVRS 261 Query: 292 YFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWV 351 YF A+ R R+ EMV +A V V CA LEA VRELR++ H P YNRRS+ P R WV Sbjct: 262 YFTAAEKRRRITEMVRIAHEVTPVVCATPLEAAVRELRLITEHEPRYNRRSKHPERHTWV 321 Query: 352 TLTDEAFPRLSVVRAPRHDRV-VGPFRSRTDATETAALLARFTGVRTCTKRLAR-SALHG 409 LTDE +PRLSVVR R +GPF SR A + L +R CT RLA S G Sbjct: 322 RLTDEPYPRLSVVRDVRPGAPHIGPFGSRRVAQDAVDALHDALPLRQCTLRLAAVSRTPG 381 Query: 410 PACPELEVSACPATRNVTA---EGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRY 466 C + C A + YA AK AA+++ G ++ + A ++ LA R+ Sbjct: 382 SPCALAGMGRCSAPCVAVVAPDDAYAAVAKTAAEVLTGDPSSVVQALAARIGRLAAEQRF 441 Query: 467 ESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSR 526 E A + + V+ R Q GG++ V+RH +LA +R Sbjct: 442 EEAGVVTGRLRAYVQGAGRAQRLAPLAACAELVAARPTPAGGWELVVVRHARLAGTAVTR 501 Query: 527 RGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTAD 585 P+PVVDAL A A+T+ P EE AL+ WL +PGVR+V HT+D Sbjct: 502 PDEDPLPVVDALRATAETVDAPVPPAPACHPEEAALVIDWLESPGVRLV------HTSD 554 >tr|C5C5G5|C5C5G5_BEUC1 Tax_Id=471853 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Beutenbergia cavernae] Length = 590 Score = 407 bits (1045), Expect = e-111 Identities = 254/571 (44%), Positives = 312/571 (54%), Gaps = 26/571 (4%) Query: 33 ALPGTDLTDPAAAQADDVSLRETTFVVVDLXXXXXXXXXXXXSP-PDAITEIGAVKVRGG 91 A PG L A L E FVVVDL SP DAITEIGAV+VRGG Sbjct: 8 AAPGRGLAVQHALDELGTPLAEVAFVVVDLETTGG-------SPNADAITEIGAVRVRGG 60 Query: 92 VILGEFATLVDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGF 151 V+ GE TLVDP RSIPP I LTGIT AM+ AP I+ VLP F EF +VLVAHNA F Sbjct: 61 VVEGELGTLVDPGRSIPPTITVLTGITNAMVIGAPPIEEVLPSFLEFAHGAVLVAHNARF 120 Query: 152 DIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRAL 211 D GFLR AA R + WP V+ TV+LARRV+SR+EAP+ RL +LARLF + P HRAL Sbjct: 121 DTGFLRVAAERMGLTWPKPLVVDTVQLARRVVSRDEAPNHRLGSLARLFHASVTPDHRAL 180 Query: 212 DDARATVEVLHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRG 271 DARATV+VLH L+ R+ GV +LR V P +RRK LADGLP PG+Y F G Sbjct: 181 TDARATVDVLHGLLARMAPLGVTHLEDLRTAGDSVPPERRRKVTLADGLPAAPGVYQFLG 240 Query: 272 PSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRML 331 P G VLYVGTA +LR RV YF ++ R R+ EM+ +A V + CA LEA VRELR++ Sbjct: 241 PQGRVLYVGTATNLRTRVRSYFTASEKRARIGEMLRIAERVHPIVCATPLEAAVRELRLI 300 Query: 332 AAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVR-APRH--DRVVGPFRSRTDATETAAL 388 A H+PPYNRRSR P R W+ LTDEA+PRLSVVR PR +GPFR+R A Sbjct: 301 AEHSPPYNRRSRAPEREPWIRLTDEAYPRLSVVREVPRSHAGAAIGPFRTRRLAQLALEA 360 Query: 389 LARFTGVRTCTKRLAR-SALHGPACPELEVSAC--PATRNVTAEGYADAAKRAADLIEGV 445 L +R C+ RL R C E+ C P + GY ++ G Sbjct: 361 LHGAFPLRQCSPRLPRVPRADASPCVLAELGRCGAPCVGRIDEPGYDTVVADVRAVLAGD 420 Query: 446 DNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDG 505 + +++ LA RYE AAR RD + + R Sbjct: 421 VEPVVATVRSRIAALAGSERYEDAARERDRLTALLRGSARAARLGGLADASHVLAARRTD 480 Query: 506 CGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAP-LGGALVEETALIA 564 GG++ R+G+LA RG M +DA+ A A+ + PAP G A EET L+ Sbjct: 481 DGGWELVCARYGRLAGVCVVPRGADVMGAIDAVRATAEHV-PAPERWCGAASAEETELVL 539 Query: 565 RWLATPGVRIVRVTGTEHTADRAESAGWTSP 595 WL PGVR+V + G AGW++P Sbjct: 540 TWLERPGVRLVELAG----------AGWSAP 560 >tr|C1WZE5|C1WZE5_9ACTO Tax_Id=479435 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Kribbella flavida DSM 17836] Length = 580 Score = 404 bits (1037), Expect = e-110 Identities = 234/534 (43%), Positives = 306/534 (57%), Gaps = 13/534 (2%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDA-ITEIGAVKVRGGVILGEFATLVDPQRSIPPQ 110 LR+ TF VVDL +P D+ ITEIGAVKVR G ++GEF +LV+P IPP Sbjct: 12 LRDVTFCVVDLETTGG-------APGDSGITEIGAVKVRAGELVGEFQSLVNPAEPIPPF 64 Query: 111 IVRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGS 170 I LTGIT M+ +P I SVLP F EF VLVAHNA FD+GFL+ + WP Sbjct: 65 IAVLTGITDLMVASSPRIGSVLPAFLEFARGCVLVAHNAPFDVGFLKHDSQVHGYDWPDF 124 Query: 171 KVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGN 230 V+ T LARRVL+ +E P+ +L LA+LF T P HRAL DARATV+VLH L ERVG+ Sbjct: 125 PVVDTALLARRVLTPDEVPNCKLGTLAKLFRATTTPNHRALSDARATVDVLHGLFERVGS 184 Query: 231 QGVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVS 290 GV + +L+ + V PA R+KR LA+ LPH PG+YLF GEVLYVG + DLR RV Sbjct: 185 LGVQTLEDLQTFSARVAPAVRKKRHLAESLPHAPGVYLFTDDRGEVLYVGKSKDLRTRVR 244 Query: 291 QYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWW 350 YF +++R R+ EM+ +A V +EC +LEA VRELR++A H P YNRRS+FP R W Sbjct: 245 SYFTASETRTRIGEMIGIASGVRGIECGTSLEAEVRELRLIAEHKPRYNRRSKFPERQHW 304 Query: 351 VTLTDEAFPRLSVVRAPRHDRV--VGPFRSRTDATETAALLARFTGVRTCTKRLARSALH 408 + +T E FPRLS+V+ R D +GPF SR A A L +R CT R++R+ Sbjct: 305 LKVTVEPFPRLSLVKQVRDDDAGYLGPFSSRKTAERAMAALHEAFPIRQCTDRMSRTPRM 364 Query: 409 GPACPELEVSAC--PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRY 466 P C E+ C P + +GYA+ + + A ++ L+ R+ Sbjct: 365 SP-CVLAEMGRCVAPCDGRIDIDGYAEFVAGLRTALVADPGPVVEALTRRIDLLSADERF 423 Query: 467 ESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSR 526 E AA RD + V R Q GG++ VIR G+LAAAG ++ Sbjct: 424 EDAAVHRDRLGAFVRSSARMQRMASVTGCAEICAARRTEDGGWELHVIRRGRLAAAGIAQ 483 Query: 527 RGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGT 580 RGT P ++ L A A+T+LP P+ A EE L+ RWL PGVR+V + GT Sbjct: 484 RGTDPRQYLEMLRASAETVLPGIGPVASASPEEIELVLRWLDQPGVRLVEMDGT 537 >tr|D1BFZ9|D1BFZ9_9MICO Tax_Id=446469 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Sanguibacter keddieii DSM 10542] Length = 616 Score = 403 bits (1035), Expect = e-110 Identities = 241/537 (44%), Positives = 310/537 (57%), Gaps = 20/537 (3%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQI 111 L E TFVVVDL S ITEIGAVKVRGG ++GEF +LV+P +P I Sbjct: 57 LSEVTFVVVDLETTGGS------SKDAGITEIGAVKVRGGEVIGEFQSLVNPGHPVPAFI 110 Query: 112 VRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSK 171 RLTGITT M+ AP+I+ VLP F EF +VLVAHNA FDI FL+AAA D+AWPG++ Sbjct: 111 ARLTGITTLMVSSAPSIELVLPSFLEFARGTVLVAHNAPFDISFLKAAARSMDLAWPGNQ 170 Query: 172 VLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQ 231 VL TV LARRV++R+EAP+ +L LA LF P HRAL DARATV+V+HAL +R+ Sbjct: 171 VLDTVPLARRVVTRDEAPNHKLGTLAALFRATITPDHRALSDARATVDVMHALFDRMAPL 230 Query: 232 GVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQ 291 G+ +L V RR+R LADG+P PG+Y+F GP EVLYVGT+ D+R RV Sbjct: 231 GITHLEDLATATDPVPADVRRRRHLADGMPSGPGVYMFVGPQDEVLYVGTSTDVRTRVRS 290 Query: 292 YFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWV 351 YF A+ RGRM EM+ LA V V CA ALEA VRELR++ HAP YNRRS+ P R WV Sbjct: 291 YFTAAEKRGRMTEMIRLAVTVRAVPCATALEARVRELRLITEHAPRYNRRSKHPERMHWV 350 Query: 352 TLTDEAFPRLSVVR---APRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRL-ARSAL 407 ++ EA+PRL+VVR A + VVGPF SR ATE L VR CTK+L A + Sbjct: 351 RVSSEAYPRLTVVRDGTAALGEPVVGPFVSRARATEAVEALQSAHQVRQCTKKLPALPSA 410 Query: 408 HGPACPELEVSAC------PATRNVTA--EGYADAAKRAADLIEGVDNTALTAAVHQVSD 459 AC E+ C P++R TA + YAD +E + + A ++++ Sbjct: 411 TASACVLAEMGRCSAPCVRPSSRPTTAPDDDYADVVAGLVRSMEHDPSPVVAALARRIAE 470 Query: 460 LAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQL 519 E+ R+E A RD + + R Q G++ V+R+G+L Sbjct: 471 HVEQQRFEDAGTDRDRLEAFLAGAARAQRLAPVVASAQIVAARPTSAAGWEIVVVRYGRL 530 Query: 520 AAAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGAL-VEETALIARWLATPGVRIV 575 A R G P+ V+A A A+ + PAP G A EET L+ WL + GVR+V Sbjct: 531 ATTAVCRHGEDPLAAVEAAVAAAEHV-PAPTSAGPACHPEETDLVVAWLRSEGVRLV 586 >tr|A6WD22|A6WD22_KINRD Tax_Id=266940 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Kineococcus radiotolerans] Length = 601 Score = 401 bits (1031), Expect = e-109 Identities = 251/571 (43%), Positives = 320/571 (56%), Gaps = 34/571 (5%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDA-ITEIGAVKVRGGVILGEFATLVDPQRSIPPQ 110 L + TFVVVDL +P DA ITEIGAVKVRGG +LGEF TLV P IP Sbjct: 23 LADATFVVVDLETTGG-------APADAGITEIGAVKVRGGQVLGEFQTLVRPSSPIPAF 75 Query: 111 IVRLTGITTAMLCDAPTIDSVLPMFFEFVG---NSVLVAHNAGFDIGFLRAAAGRCDIAW 167 + LTGIT M+ AP++ VLP F EF G +VLVAHNA +D FL+AA W Sbjct: 76 VQVLTGITNGMVATAPSLAQVLPAFLEFAGFERGTVLVAHNAPYDTSFLKAACQVTGRPW 135 Query: 168 PGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIER 227 P +V+ TV LAR+++ R+EAP +L LARLF AT P HRAL DARATV+VLHAL+ R Sbjct: 136 PKPRVVDTVVLARQLVDRDEAPDRKLGTLARLFGTATTPDHRALHDARATVDVLHALLGR 195 Query: 228 VGNQGVHSYAELRAYLP-GVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLR 286 VGN+GVHS +L A+ V P +R K+ LA GLP PG+Y FR +G VLYVGT+VD+ Sbjct: 196 VGNRGVHSLEDLSAFAATAVNPVRRAKKHLAVGLPSAPGVYQFRDAAGRVLYVGTSVDVH 255 Query: 287 RRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPH 346 RRVS YF +++R RM EMV LA V V C LEA VRELR++A HAPPYNRRS+ P Sbjct: 256 RRVSSYFTASETRPRMTEMVRLASTVVPVVCQTPLEARVRELRLIAEHAPPYNRRSKAPE 315 Query: 347 RWWWVTLTDEAFPRLSVVRAPRHD-----RVVGPFRSRTDATETAALLARFTGVRTCTKR 401 + WV LT +A+PRLS+V+ R D +GPFRS A L +R CT+R Sbjct: 316 KVTWVKLTTDAWPRLSLVKQVRDDVAAGAEYLGPFRSTRTAELAVEALHETHPLRQCTRR 375 Query: 402 LARSAL-HGP-ACPELEVSACPATRNVTAEGYADAAKRAADLIE------GVDNTALTAA 453 + R+ GP AC E+ C A T G DA AA + E TALT Sbjct: 376 IPRTPTGEGPGACVLAEIGRCGAPCLGTGRGGQDAESYAAVVAEVRAALRSDATTALTRG 435 Query: 454 VHQVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXD------GCG 507 ++ +LA + RYE AA RD + + R Q G Sbjct: 436 RERLRELAGQQRYEEAATTRDRLEAFLTAAERAQRRAPVAATPEIVAARRSEPAPGWRTG 495 Query: 508 GYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWL 567 G++ +IR+G+LA + G+ PMP ++AL A + + P G LVEET ++ WL Sbjct: 496 GWEVVLIRYGRLAGTCVTPAGSDPMPHIEALRATGEVVAPPAPGRPGLLVEETDVLLGWL 555 Query: 568 ATPGVRIVRV---TGTEHTADRAESAGWTSP 595 PGVR+V + G + D + W SP Sbjct: 556 EQPGVRLVSLDDGRGDDDAGDAGAAVAWASP 586 >tr|C4DEN5|C4DEN5_9ACTO Tax_Id=446470 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Stackebrandtia nassauensis DSM 44728] Length = 552 Score = 401 bits (1030), Expect = e-109 Identities = 222/501 (44%), Positives = 308/501 (61%), Gaps = 5/501 (0%) Query: 79 AITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEF 138 +ITEIGAVKVRGG +LGE+ATLV+P +I +I LTGIT AM+ DAP I+ VLP F EF Sbjct: 16 SITEIGAVKVRGGEVLGEYATLVNPGEAIDARISALTGITDAMVADAPAIEEVLPSFLEF 75 Query: 139 VGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALAR 198 +V VAHNA FD+GFLR+A + ++ WP +V+ TV LARR++ R E P+ RL+ LAR Sbjct: 76 ARGAVWVAHNAPFDVGFLRSACAQAELPWPRPQVVDTVVLARRLVDRSEVPNKRLSTLAR 135 Query: 199 LFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPGVTPAQRR-KRVLA 257 F +P+HRALDDARATV+VLHAL+ER+G V + +L + + A+RR KR LA Sbjct: 136 YFGARVKPSHRALDDARATVDVLHALLERLGTHYVLTDEDLADFQRVIPAAERRKKRHLA 195 Query: 258 DGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVEC 317 +GLPH PG+Y+FR LYVGT+VDL RV YF+ ++RG+M++M+ LA V+ +EC Sbjct: 196 EGLPHAPGVYVFRDAEDRPLYVGTSVDLAARVRGYFSAGETRGKMRDMLRLAERVEAIEC 255 Query: 318 AHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVRAPRH--DRVVGP 375 AH LEAGVRE+R++ A PP+NRRS++P R W+ LT EA+PRLSV R P +GP Sbjct: 256 AHRLEAGVREVRLIGATKPPFNRRSKYPERVLWLRLTAEAYPRLSVARTPPEAGSAWLGP 315 Query: 376 FRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSA-CPATRNVTAEGYADA 434 F S+ A + +R C RL+ + AC E+ P ++ + Y Sbjct: 316 FTSQRSAEYARDAVHDALPLRQCRTRLSPRKV-SSACALAEMGCPAPCQLSIGVDEYGKI 374 Query: 435 AKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEVLWRGQXXXXXXX 494 A A+ + + + +++ L++ HR+E AA R +A + + R Q Sbjct: 375 AAGFAEAVAADPAAIVDPLLARIAQLSDAHRFEEAAEARSRLAAFLRGVKRTQRVSALVR 434 Query: 495 XXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGG 554 GG++ AV+RHG LAAAG S T PMP+VD+L A + T++P A L Sbjct: 435 IAELVAAKPAAGGGWELAVVRHGVLAAAGTSPPRTDPMPLVDSLRAESSTVVPDAAVLAA 494 Query: 555 ALVEETALIARWLATPGVRIV 575 + + ET LIA WL + GVR+V Sbjct: 495 SRLGETELIADWLESDGVRLV 515 >tr|A1SLE5|A1SLE5_NOCSJ Tax_Id=196162 SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7;[Nocardioides sp.] Length = 601 Score = 400 bits (1029), Expect = e-109 Identities = 242/539 (44%), Positives = 311/539 (57%), Gaps = 16/539 (2%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQI 111 LR+ TF VVDL ITEIGAVKVRGG +LGEF TLV+P+ IP I Sbjct: 25 LRDITFCVVDLETTGGSAEGGAM-----ITEIGAVKVRGGEVLGEFQTLVNPRTEIPAFI 79 Query: 112 VRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSK 171 LTGI+ +M+ DAP +++ LP F EF SVLVAHNA FD+GFLR A + WPG + Sbjct: 80 AVLTGISNSMVADAPPVEAALPAFLEFAAGSVLVAHNAPFDVGFLRYFAEQQGRPWPGFE 139 Query: 172 VLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQ 231 V+ T RLARRV+SR++AP+ +L++LA+ F T P HRAL DARATV+VLH L+ER+G Sbjct: 140 VVDTARLARRVVSRDDAPNCKLSSLAKAFGSTTTPNHRALSDARATVDVLHGLMERLGGV 199 Query: 232 GVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQ 291 GVH+ EL+ + V+ AQRRKR LA+GLPH PG+YLFR +VLYVGT+ DLR RV Sbjct: 200 GVHTLEELQTFSSRVSSAQRRKRHLAEGLPHAPGVYLFRDEQAQVLYVGTSRDLRTRVRS 259 Query: 292 YFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWV 351 YF +++R RM EMV +A VD +ECA ALEA VRELR++A H P YNRRSR P + ++ Sbjct: 260 YFTASETRSRMGEMVGIATVVDAIECATALEAEVRELRLIAEHKPKYNRRSRNPSKVHFI 319 Query: 352 TLTDEAFPRLSVVRAPRHDRV--VGPFRSRTDATETAALLARFTGVRTCTKRLA--RSAL 407 LT E +PRLS+VR D +GPF S+ A + A L VR CT RL +A Sbjct: 320 KLTREPWPRLSLVRRVLDDDADYLGPFSSKKTAEKCLAALHETFPVRQCTDRLPGDPAAA 379 Query: 408 HGPACPELEVSAC--PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHR 465 C E+ C P +V YA + D + + + ++ LA R Sbjct: 380 GRAPCVLAEMGRCLAPCDGSVDHATYAAVVHQLRDTLLRRPDEVVETINAKMGALAADER 439 Query: 466 YESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXD----GCGG-YQFAVIRHGQLA 520 +E A RD +A V R Q + G GG + V+RHG+LA Sbjct: 440 FEEAGVHRDRLAAFVRAAARTQRLSALTRCPEVVAARREDDPTGPGGRWAVHVVRHGRLA 499 Query: 521 AAGNSRRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTG 579 AAG G V L A+T+ AP P+ A EET I RWL +PG+R+V V G Sbjct: 500 AAGVIPAGADAHAYVATLRLSAETVAAAPGPVPAASAEETERILRWLESPGIRLVDVDG 558 >tr|C7NIC3|C7NIC3_KYTSD Tax_Id=478801 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Kytococcus sedentarius] Length = 584 Score = 396 bits (1018), Expect = e-108 Identities = 250/550 (45%), Positives = 306/550 (55%), Gaps = 23/550 (4%) Query: 52 LRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQI 111 L + TFVV DL S ITE GAVKVRGG ++GEF TLV P IPP I Sbjct: 22 LADVTFVVFDLETTGTS------SADSEITEFGAVKVRGGEVVGEFQTLVRPAAGIPPYI 75 Query: 112 VRLTGITTAMLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSK 171 LTGITTAM+ AP+I+ VLP F EFVG++VLVAHNA FD F+R A R PG+ Sbjct: 76 QVLTGITTAMVSAAPSIEQVLPNFLEFVGDAVLVAHNARFDTAFVRRACERTGRPAPGNP 135 Query: 172 VLCTVRLARRVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQ 231 VL TV LAR++L R E P+ +L+ LA F T P+HRALDDARATV+VLH LIERVG Sbjct: 136 VLDTVHLARQLLPRPEVPNHKLSTLAAYFRAETTPSHRALDDARATVDVLHGLIERVGPL 195 Query: 232 GVHSYAELRAYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQ 291 GVHS EL AY V A+RRKR LA LP PG+Y F +GEVLYVGTAV++RRRVSQ Sbjct: 196 GVHSLEELLAYSRHVPEARRRKRTLAADLPEAPGVYRFLDAAGEVLYVGTAVNIRRRVSQ 255 Query: 292 YFNGADSRGRMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWV 351 YF +++R RM +MV LA V + C ALEA VRELR++A H P YNR +V Sbjct: 256 YFTASETRRRMGDMVRLAERVVPIVCPTALEASVRELRLIAEHRPRYNRAGLKGASLPYV 315 Query: 352 TLTDEAFPRLSVVRAPRHDRV--VGPFRSRTDATETAALLARFTGVRTCTKRL--ARSAL 407 LTDE FPRLSVVRA D +GPF S + A E L +R CT R+ A +A Sbjct: 316 RLTDEPFPRLSVVRAVSDDAATHIGPFPSASAAKEAVQALHSALPLRQCTSRITEASAAR 375 Query: 408 HGPACPELEVSAC--PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHR 465 AC ++ C P T ++ YA+ RA + A A ++ +LA R Sbjct: 376 ATTACALADLGRCGAPCTGAMSRSEYAEVTTRARAALATDHREAWQALAARMDELAGAER 435 Query: 466 YESAARLRDHIATAVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNS 525 YE A LRD + R Q GG++ IRHG+LA + + Sbjct: 436 YEEARVLRDGARAYLRAAARRQRHEALAGVRELVAAAPMRGGGWELVCIRHGRLAGSALA 495 Query: 526 RRGTPPMPVVDALHAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGTEHTAD 585 RG PMPVV+AL A A+ + AL ET L+ RWL GVR+V Sbjct: 496 PRGVDPMPVVEALTATAEVVRARTDGSPAALPGETDLVLRWLEAEGVRLV---------- 545 Query: 586 RAESAGWTSP 595 S GW +P Sbjct: 546 -TASDGWATP 554 >tr|Q6A9T9|Q6A9T9_PROAC Tax_Id=1747 SubName: Full=DNA polymerase III epsilon subunit (3'-5' exonuclease);[Propionibacterium acnes] Length = 633 Score = 379 bits (972), Expect = e-103 Identities = 248/577 (42%), Positives = 316/577 (54%), Gaps = 34/577 (5%) Query: 20 SLTGLDPAAFADIALPGTDLTDPAAAQA--DDV--SLRETTFVVVDLXXXXXXXXXXXXS 75 SL L F LP + A Q DD+ SL E TF VVDL S Sbjct: 27 SLLCLYSRCFLSPRLPTVPIMSAAPLQPSFDDLGTSLSEVTFCVVDLETTGT-------S 79 Query: 76 PPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMF 135 ITEIGAVKV GG + GEF TLV P SIP + LTGIT M+ AP++++VLP + Sbjct: 80 EGSQITEIGAVKVCGGRVEGEFQTLVCPTGSIPASVQVLTGITDVMVRSAPSLNAVLPSW 139 Query: 136 FEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAA 195 EF ++ LVAHNA FDIGFL+ A + D W V+ T+ LAR VL+R E + +L+ Sbjct: 140 SEFSRSTALVAHNARFDIGFLQRAYAQHDYPWDDPAVVDTLALARSVLARGEVRNYKLST 199 Query: 196 LARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRV 255 L+RLF T P+HRAL DARATV+VLH LI+RVGN GV + +L V A+RR+RV Sbjct: 200 LSRLFHTTTTPSHRALADARATVDVLHGLIDRVGNLGVTTLEDLLEMTHRVPQARRRRRV 259 Query: 256 LADGLPHRPGIYLF-----RGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEMVALAG 310 A LP R G+Y F EVLYVG +V++RRRVSQYF +++R RM EMV +A Sbjct: 260 WAKDLPERSGVYWFCLDKPAPAHPEVLYVGKSVNIRRRVSQYFTASETRRRMDEMVRIAT 319 Query: 311 AVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVRAPRHD 370 V EC+ LEAGVRELR++ AH P YNRRSR WWVTLT EA PRL+VV+ D Sbjct: 320 GVKARECSTQLEAGVRELRLIDAHQPRYNRRSRRQGSVWWVTLTHEAHPRLAVVQRAHRD 379 Query: 371 RVV--GPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSAC------PA 422 GPF SR AT A +LA G+R C+ ++R H CP E+ C P Sbjct: 380 SQPPWGPFTSRQAATRAAIILAEAFGLRQCSGAMSR---HPDGCPLAEMGRCSAPCLDPH 436 Query: 423 TRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAVEV 482 T G+A A D+ + D A +++ L+ R+E AA + + Sbjct: 437 IDYSTIVGFARLA-MTDDVRDLTDRLA-----QRIARLSAAERFEEAAEFTEDAQEVLRA 490 Query: 483 LWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHAGA 542 R DG ++ VIRHG+LA AG R GT PMPV+DA+ A A Sbjct: 491 TRRRSRLVSLASCPEIVAARRDG-ASWEIHVIRHGRLAGAGRCRLGTDPMPVIDAVCATA 549 Query: 543 QTILPAPAPLGGALVEETALIARWLATPGVRIVRVTG 579 +T+ +PA L +EE L+A W PGVR+V V G Sbjct: 550 ETVSASPAGLPACTIEEAELVASWFEEPGVRLVDVIG 586 >tr|C1YUT4|C1YUT4_NOCDA Tax_Id=446468 SubName: Full=Exonuclease, DNA polymerase III, epsilon subunit family;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 595 Score = 353 bits (906), Expect = 4e-95 Identities = 234/581 (40%), Positives = 303/581 (52%), Gaps = 44/581 (7%) Query: 27 AAFADIALPGTDLTDPAAAQADDVSLRETTFVVVDLXXXXXXXXXXXXSPPDAITEIGAV 86 AA A + +DL P AA +FVV+DL + ITE+GAV Sbjct: 5 AAPAGVQTSISDLGTPLAA---------ASFVVLDLETTGTS------ASGSRITEVGAV 49 Query: 87 KVRGGVILGEFATLVDPQRSIPPQIVRLTGITTAMLCDAPTIDSVLPMFFEFVG---NSV 143 +VRGG ++GEFATLV+P IP I LTGIT +M+ AP ++ VLP F+ ++V Sbjct: 50 RVRGGEVVGEFATLVNPGTPIPANITLLTGITQSMVASAPPMEEVLPRLLAFLDAEPDTV 109 Query: 144 LVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLARRVLSREEAPSVRLAALARLFSVA 203 LVAHNA FD GFL+AA R WPG V+ T+RLAR VL+R E + RLA LA F V Sbjct: 110 LVAHNAPFDTGFLKAACERHGTDWPGYPVVDTLRLARAVLARGETRNHRLATLAAYFGVP 169 Query: 204 TQPTHRALDDARATVEVLHALIERVGNQGVHSYAELRAYLPGVTPAQRRKRVLADGLPHR 263 P HRAL+DARATV VLH L+ER+ GV S ELRA T AQR +R LA+ LP Sbjct: 170 VAPNHRALEDARATVGVLHGLVERLRPMGVSSVEELRAVTKPPTKAQRSRRHLAEDLPEE 229 Query: 264 PGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRGRMKEMVALAGAVDHVECAHALEA 323 PG+Y+F GE LYVG + +LRRRV YF A+SR R++EM L V + C+ LEA Sbjct: 230 PGVYVFTDARGESLYVGKSKNLRRRVRTYFTAAESRQRIREMAGLVAGVTPIVCSSELEA 289 Query: 324 GVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVVRAPRHDRV--VGPFRSRTD 381 VRELR++A PPYNRRSR P R WV LT +AFPRLSVVRA D +GP+ S + Sbjct: 290 SVRELRIIAERKPPYNRRSRNPERASWVRLTADAFPRLSVVRAVSGDGAAHIGPYASPRE 349 Query: 382 ATETAALLARFTGVRTC--TKRLARSALHGPA-------------------CPELEVSAC 420 A L +R C T R ++ G C ++ C Sbjct: 350 AERAREALLHVFPLRQCAHTFRPPKAVAGGSGGGTRVAPQVVTSGARWTGPCVVAQLGRC 409 Query: 421 --PATRNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIAT 478 P + + YA A+ A + G + A ++ +LA RYE AA LRD + Sbjct: 410 GAPCDGSESEAEYAVHAEAARVAMTGDPAAVVDAYTARIGELAADLRYEEAAHLRDRLTA 469 Query: 479 AVEVLWRGQXXXXXXXXXXXXXXXXDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDAL 538 + R Q G++ V+RHG+LAA+ R GT P + +L Sbjct: 470 FLRGARRAQRLSAIAAVAHLVASRRT-AAGWETCVVRHGRLAASAVLRPGTDPAAFLASL 528 Query: 539 HAGAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTG 579 A A+ + P GAL ET L+ WLA P R+V + G Sbjct: 529 VATAEYVPAGYGPSPGALPGETELVLDWLADPATRLVEIDG 569 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.321 0.134 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 4,438,733,232 Number of extensions: 169930816 Number of successful extensions: 480526 Number of sequences better than 10.0: 5602 Number of HSP's gapped: 477646 Number of HSP's successfully gapped: 5617 Length of query: 674 Length of database: 3,846,993,858 Length adjustment: 145 Effective length of query: 529 Effective length of database: 2,212,089,423 Effective search space: 1170195304767 Effective search space used: 1170195304767 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 84 (37.0 bits)