BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_3343 (189 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HHS1|B2HHS1_MYCMM Tax_Id=216594 SubName: Full=Transcription... 329 8e-89 tr|A0PNE0|A0PNE0_MYCUA Tax_Id=362242 SubName: Full=Transcription... 327 4e-88 tr|A5WPM1|A5WPM1_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 253 6e-66 sp|Q10528|Y2250_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 252 2e-65 tr|C6DPF5|C6DPF5_MYCTK Tax_Id=478434 SubName: Full=Transcription... 252 2e-65 tr|C1AQG7|C1AQG7_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 252 2e-65 tr|A5U4T2|A5U4T2_MYCTA Tax_Id=419947 SubName: Full=Putative tran... 252 2e-65 tr|A1KKU4|A1KKU4_MYCBP Tax_Id=410289 SubName: Full=Possible tran... 252 2e-65 tr|A4KJ19|A4KJ19_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 252 2e-65 tr|A2VJY6|A2VJY6_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 252 2e-65 sp|Q7VEN0|Y2274_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ... 249 1e-64 tr|A0QEQ8|A0QEQ8_MYCA1 Tax_Id=243243 SubName: Full=Transcription... 232 1e-59 tr|Q73YF3|Q73YF3_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 231 2e-59 tr|A0R0C0|A0R0C0_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 204 5e-51 tr|Q1B6K4|Q1B6K4_MYCSS Tax_Id=164756 SubName: Full=Transcription... 190 8e-47 tr|A3Q1Y5|A3Q1Y5_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 190 8e-47 tr|A1UIH1|A1UIH1_MYCSK Tax_Id=189918 SubName: Full=Transcription... 190 8e-47 tr|A4T253|A4T253_MYCGI Tax_Id=350054 SubName: Full=Transcription... 177 4e-43 tr|A1TBJ2|A1TBJ2_MYCVP Tax_Id=350058 SubName: Full=Transcription... 177 4e-43 tr|C3JKC4|C3JKC4_RHOER Tax_Id=596309 SubName: Full=Regulatory pr... 142 2e-32 tr|C0ZYM2|C0ZYM2_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR... 141 4e-32 tr|Q0S1Q3|Q0S1Q3_RHOSR Tax_Id=101510 SubName: Full=Probable tran... 139 2e-31 tr|C1B377|C1B377_RHOOB Tax_Id=632772 SubName: Full=Putative TetR... 138 3e-31 tr|B1MH76|B1MH76_MYCA9 Tax_Id=561007 SubName: Full=Putative tran... 134 6e-30 tr|Q5Z052|Q5Z052_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 130 5e-29 tr|A8L5Z5|A8L5Z5_FRASN Tax_Id=298653 SubName: Full=Transcription... 120 7e-26 tr|Q0RQE6|Q0RQE6_FRAAA Tax_Id=326424 SubName: Full=Putative TetR... 111 3e-23 tr|D0L9A6|D0L9A6_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr... 110 6e-23 tr|Q2JEG6|Q2JEG6_FRASC Tax_Id=106370 SubName: Full=Transcription... 107 8e-22 tr|A4X825|A4X825_SALTO Tax_Id=369723 SubName: Full=Regulatory pr... 103 9e-21 tr|A8M5P3|A8M5P3_SALAI Tax_Id=391037 SubName: Full=Transcription... 100 1e-19 tr|D1ACN2|D1ACN2_THECU Tax_Id=471852 SubName: Full=Transcription... 95 4e-18 tr|A4F7H9|A4F7H9_SACEN Tax_Id=405948 SubName: Full=TetR-family t... 94 6e-18 tr|C7MZR3|C7MZR3_SACVD Tax_Id=471857 SubName: Full=Transcription... 92 4e-17 tr|Q9RJ96|Q9RJ96_STRCO Tax_Id=1902 SubName: Full=Putative TetR-f... 91 6e-17 tr|A0AD60|A0AD60_STRAM Tax_Id=278992 SubName: Full=Putative TetR... 91 6e-17 tr|C1YHN4|C1YHN4_NOCDA Tax_Id=446468 SubName: Full=Transcription... 91 8e-17 tr|A1SQK1|A1SQK1_NOCSJ Tax_Id=196162 SubName: Full=Regulatory pr... 89 3e-16 tr|C4ENA2|C4ENA2_STRRS Tax_Id=479432 SubName: Full=Transcription... 87 7e-16 tr|B5H6M4|B5H6M4_STRPR Tax_Id=457429 SubName: Full=TetR-family t... 83 2e-14 tr|C7QJ53|C7QJ53_CATAD Tax_Id=479433 SubName: Full=Transcription... 80 1e-13 tr|C1WM04|C1WM04_9ACTO Tax_Id=479435 SubName: Full=Transcription... 78 4e-13 tr|D0YS27|D0YS27_9ACTO Tax_Id=596328 SubName: Full=Transcription... 74 6e-12 tr|C2KRN5|C2KRN5_9ACTO Tax_Id=585199 SubName: Full=Transcription... 74 6e-12 tr|A4FGQ5|A4FGQ5_SACEN Tax_Id=405948 SubName: Full=TetR-family t... 72 4e-11 tr|C2BRV0|C2BRV0_9ACTO Tax_Id=548479 SubName: Full=TetR family t... 66 2e-09 tr|B1MJF8|B1MJF8_MYCA9 Tax_Id=561007 SubName: Full=Putative TetR... 61 5e-08 tr|Q5YQE3|Q5YQE3_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 58 4e-07 tr|B4X501|B4X501_9GAMM Tax_Id=236097 SubName: Full=Transcription... 58 6e-07 tr|A1T3Q7|A1T3Q7_MYCVP Tax_Id=350058 SubName: Full=Transcription... 56 2e-06 >tr|B2HHS1|B2HHS1_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 189 Score = 329 bits (844), Expect = 8e-89 Identities = 175/189 (92%), Positives = 175/189 (92%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA Sbjct: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 LLTSHVTDVVRAVSLDGH RLRGDELVKALMHSDLARVYITERLGAS Sbjct: 61 LLTSHVTDVVRAVSLDGHDRQTVVRQVVAVADRLRGDELVKALMHSDLARVYITERLGAS 120 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL Sbjct: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Query: 181 TYSLNGYLA 189 TYSLNGYLA Sbjct: 181 TYSLNGYLA 189 >tr|A0PNE0|A0PNE0_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 189 Score = 327 bits (838), Expect = 4e-88 Identities = 174/189 (92%), Positives = 174/189 (92%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA Sbjct: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 LLTSHVTDVVRAV LDGH RLRGDELVKALMHSDLARVYITERLGAS Sbjct: 61 LLTSHVTDVVRAVFLDGHDRQTVVRQVVAVADRLRGDELVKALMHSDLARVYITERLGAS 120 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL Sbjct: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Query: 181 TYSLNGYLA 189 TYSLNGYLA Sbjct: 181 TYSLNGYLA 189 >tr|A5WPM1|A5WPM1_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 189 Score = 253 bits (647), Expect = 6e-66 Identities = 133/188 (70%), Positives = 152/188 (80%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSN D G RIL+AAASCV DYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSI+++ Sbjct: 1 MLSMSNDRADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIMAS 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 +LTSH+ DV+R V LDG RLRGD+L+ ++MHS+LARVYITERLGAS Sbjct: 61 MLTSHIADVLREVPLDGDDREALVKQIVAVADRLRGDDLIMSVMHSELARVYITERLGAS 120 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q L+EGLAARL VAQ +GSVR+GD R+LA MVLLI QSTIQS DI+D ILDS ALA EL Sbjct: 121 QQVLIEGLAARLTVAQRSGSVRSGDARRLATMVLLIAQSTIQSADIVDSILDSAALATEL 180 Query: 181 TYSLNGYL 188 T++LNGYL Sbjct: 181 THALNGYL 188 >sp|Q10528|Y2250_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized HTH-type transcriptional regulator Rv2250c/MT2310;[Mycobacterium tuberculosis] Length = 189 Score = 252 bits (643), Expect = 2e-65 Identities = 132/188 (70%), Positives = 151/188 (80%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSN D G RIL+AAASCV DYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSI+++ Sbjct: 1 MLSMSNDRADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIMAS 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 +LTSH+ DV+R V LDG RLRGD+L+ ++MHS+LARVYITERLG S Sbjct: 61 MLTSHIADVLREVPLDGDDREALVKQIVAVADRLRGDDLIMSVMHSELARVYITERLGTS 120 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q L+EGLAARL VAQ +GSVR+GD R+LA MVLLI QSTIQS DI+D ILDS ALA EL Sbjct: 121 QQVLIEGLAARLTVAQRSGSVRSGDARRLATMVLLIAQSTIQSADIVDSILDSAALATEL 180 Query: 181 TYSLNGYL 188 T++LNGYL Sbjct: 181 THALNGYL 188 >tr|C6DPF5|C6DPF5_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 189 Score = 252 bits (643), Expect = 2e-65 Identities = 132/188 (70%), Positives = 151/188 (80%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSN D G RIL+AAASCV DYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSI+++ Sbjct: 1 MLSMSNDRADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIMAS 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 +LTSH+ DV+R V LDG RLRGD+L+ ++MHS+LARVYITERLG S Sbjct: 61 MLTSHIADVLREVPLDGDDREALVKQIVAVADRLRGDDLIMSVMHSELARVYITERLGTS 120 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q L+EGLAARL VAQ +GSVR+GD R+LA MVLLI QSTIQS DI+D ILDS ALA EL Sbjct: 121 QQVLIEGLAARLTVAQRSGSVRSGDARRLATMVLLIAQSTIQSADIVDSILDSAALATEL 180 Query: 181 TYSLNGYL 188 T++LNGYL Sbjct: 181 THALNGYL 188 >tr|C1AQG7|C1AQG7_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 189 Score = 252 bits (643), Expect = 2e-65 Identities = 132/188 (70%), Positives = 151/188 (80%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSN D G RIL+AAASCV DYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSI+++ Sbjct: 1 MLSMSNDRADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIMAS 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 +LTSH+ DV+R V LDG RLRGD+L+ ++MHS+LARVYITERLG S Sbjct: 61 MLTSHIADVLREVPLDGDDREALVKQIVAVADRLRGDDLIMSVMHSELARVYITERLGTS 120 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q L+EGLAARL VAQ +GSVR+GD R+LA MVLLI QSTIQS DI+D ILDS ALA EL Sbjct: 121 QQVLIEGLAARLTVAQRSGSVRSGDARRLATMVLLIAQSTIQSADIVDSILDSAALATEL 180 Query: 181 TYSLNGYL 188 T++LNGYL Sbjct: 181 THALNGYL 188 >tr|A5U4T2|A5U4T2_MYCTA Tax_Id=419947 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 189 Score = 252 bits (643), Expect = 2e-65 Identities = 132/188 (70%), Positives = 151/188 (80%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSN D G RIL+AAASCV DYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSI+++ Sbjct: 1 MLSMSNDRADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIMAS 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 +LTSH+ DV+R V LDG RLRGD+L+ ++MHS+LARVYITERLG S Sbjct: 61 MLTSHIADVLREVPLDGDDREALVKQIVAVADRLRGDDLIMSVMHSELARVYITERLGTS 120 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q L+EGLAARL VAQ +GSVR+GD R+LA MVLLI QSTIQS DI+D ILDS ALA EL Sbjct: 121 QQVLIEGLAARLTVAQRSGSVRSGDARRLATMVLLIAQSTIQSADIVDSILDSAALATEL 180 Query: 181 TYSLNGYL 188 T++LNGYL Sbjct: 181 THALNGYL 188 >tr|A1KKU4|A1KKU4_MYCBP Tax_Id=410289 SubName: Full=Possible transcriptional regulatory protein;[Mycobacterium bovis] Length = 189 Score = 252 bits (643), Expect = 2e-65 Identities = 132/188 (70%), Positives = 151/188 (80%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSN D G RIL+AAASCV DYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSI+++ Sbjct: 1 MLSMSNDRADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIMAS 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 +LTSH+ DV+R V LDG RLRGD+L+ ++MHS+LARVYITERLG S Sbjct: 61 MLTSHIADVLREVPLDGDDREALVKQIVAVADRLRGDDLIMSVMHSELARVYITERLGTS 120 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q L+EGLAARL VAQ +GSVR+GD R+LA MVLLI QSTIQS DI+D ILDS ALA EL Sbjct: 121 QQVLIEGLAARLTVAQRSGSVRSGDARRLATMVLLIAQSTIQSADIVDSILDSAALATEL 180 Query: 181 TYSLNGYL 188 T++LNGYL Sbjct: 181 THALNGYL 188 >tr|A4KJ19|A4KJ19_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 189 Score = 252 bits (643), Expect = 2e-65 Identities = 132/188 (70%), Positives = 151/188 (80%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSN D G RIL+AAASCV DYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSI+++ Sbjct: 1 MLSMSNDRADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIMAS 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 +LTSH+ DV+R V LDG RLRGD+L+ ++MHS+LARVYITERLG S Sbjct: 61 MLTSHIADVLREVPLDGDDREALVKQIVAVADRLRGDDLIMSVMHSELARVYITERLGTS 120 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q L+EGLAARL VAQ +GSVR+GD R+LA MVLLI QSTIQS DI+D ILDS ALA EL Sbjct: 121 QQVLIEGLAARLTVAQRSGSVRSGDARRLATMVLLIAQSTIQSADIVDSILDSAALATEL 180 Query: 181 TYSLNGYL 188 T++LNGYL Sbjct: 181 THALNGYL 188 >tr|A2VJY6|A2VJY6_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 219 Score = 252 bits (643), Expect = 2e-65 Identities = 132/188 (70%), Positives = 151/188 (80%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSN D G RIL+AAASCV DYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSI+++ Sbjct: 31 MLSMSNDRADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIMAS 90 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 +LTSH+ DV+R V LDG RLRGD+L+ ++MHS+LARVYITERLG S Sbjct: 91 MLTSHIADVLREVPLDGDDREALVKQIVAVADRLRGDDLIMSVMHSELARVYITERLGTS 150 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q L+EGLAARL VAQ +GSVR+GD R+LA MVLLI QSTIQS DI+D ILDS ALA EL Sbjct: 151 QQVLIEGLAARLTVAQRSGSVRSGDARRLATMVLLIAQSTIQSADIVDSILDSAALATEL 210 Query: 181 TYSLNGYL 188 T++LNGYL Sbjct: 211 THALNGYL 218 >sp|Q7VEN0|Y2274_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized HTH-type transcriptional regulator Mb2274c;[Mycobacterium bovis] Length = 189 Score = 249 bits (635), Expect = 1e-64 Identities = 131/188 (69%), Positives = 150/188 (79%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 MLSMSN D G RIL+AAASCV DYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSI+++ Sbjct: 1 MLSMSNDRADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIMAS 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGAS 120 +LTSH+ V+R V LDG RLRGD+L+ ++MHS+LARVYITERLG S Sbjct: 61 MLTSHIAAVLREVPLDGDDREALVKQIVAVADRLRGDDLIMSVMHSELARVYITERLGTS 120 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q L+EGLAARL VAQ +GSVR+GD R+LA MVLLI QSTIQS DI+D ILDS ALA EL Sbjct: 121 QQVLIEGLAARLTVAQRSGSVRSGDARRLATMVLLIAQSTIQSADIVDSILDSAALATEL 180 Query: 181 TYSLNGYL 188 T++LNGYL Sbjct: 181 THALNGYL 188 >tr|A0QEQ8|A0QEQ8_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium avium] Length = 193 Score = 232 bits (592), Expect = 1e-59 Identities = 125/193 (64%), Positives = 146/193 (75%), Gaps = 4/193 (2%) Query: 1 MLSMSN----APEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRS 56 MLS+ N A D G+RIL AAASCV D+GVDRVTLAEIARRAGVSRPTVYRRWPDTRS Sbjct: 1 MLSIRNDRPDAALDTGERILAAAASCVVDFGVDRVTLAEIARRAGVSRPTVYRRWPDTRS 60 Query: 57 IISALLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITER 116 I++ALLT HVTDV+RA L G LR D LV +++HS+LA +YITER Sbjct: 61 IVAALLTRHVTDVMRAAPLLGDDRESLVRQIVTVADLLRQDRLVMSVLHSELAPIYITER 120 Query: 117 LGASQHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEAL 176 LG SQH L++ LAARL+VAQ GSVR GDP ++A MVLLI QSTIQS I++P+LD+EAL Sbjct: 121 LGTSQHMLIDALAARLRVAQRNGSVRPGDPVQMATMVLLIAQSTIQSAQIVEPLLDAEAL 180 Query: 177 AAELTYSLNGYLA 189 A EL YSLNGYL+ Sbjct: 181 ATELAYSLNGYLS 193 >tr|Q73YF3|Q73YF3_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 230 Score = 231 bits (590), Expect = 2e-59 Identities = 125/193 (64%), Positives = 146/193 (75%), Gaps = 4/193 (2%) Query: 1 MLSMSN----APEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRS 56 MLS+ N A D G+RIL AAASCV D+GVDRVTLAEIARRAGVSRPTVYRRWPDTRS Sbjct: 38 MLSIRNDKPDAVLDTGERILAAAASCVVDFGVDRVTLAEIARRAGVSRPTVYRRWPDTRS 97 Query: 57 IISALLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITER 116 I++ALLT HVTDV+RA L G LR D LV +++HS+LA +YITER Sbjct: 98 IVAALLTRHVTDVMRAAPLLGDDRESLVRQIVTVADLLRQDRLVMSVLHSELAPIYITER 157 Query: 117 LGASQHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEAL 176 LG SQH L++ LAARL+VAQ GSVR GDP ++A MVLLI QSTIQS I++P+LD+EAL Sbjct: 158 LGTSQHMLIDALAARLRVAQRNGSVRPGDPVQMATMVLLIAQSTIQSAQIVEPLLDAEAL 217 Query: 177 AAELTYSLNGYLA 189 A EL YSLNGYL+ Sbjct: 218 AKELAYSLNGYLS 230 >tr|A0R0C0|A0R0C0_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium smegmatis] Length = 194 Score = 204 bits (518), Expect = 5e-51 Identities = 111/192 (57%), Positives = 140/192 (72%), Gaps = 4/192 (2%) Query: 1 MLSMSN--APEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSII 58 M+S+SN A E +G+RIL+AAASCV +GVDRVTLAEIARRAGVSRPTVYRR+PDTRSI+ Sbjct: 1 MVSISNDDAGESLGERILEAAASCVMAFGVDRVTLAEIARRAGVSRPTVYRRFPDTRSIL 60 Query: 59 SALLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHS--DLARVYITER 116 +ALLT+ + V+ V D RLR DE++ A++H+ D+A VYI ER Sbjct: 61 AALLTARIVRVLDEVESDARGREALVRRIVAVAERLRHDEVIMAVLHTAPDVAMVYIAER 120 Query: 117 LGASQHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEAL 176 LG SQ L++ +A +++AQ GSVRAGD R+LA M LLITQS IQS ++ PILD++AL Sbjct: 121 LGTSQQILIDAVAGEIKIAQEGGSVRAGDARQLATMCLLITQSAIQSAQMVAPILDADAL 180 Query: 177 AAELTYSLNGYL 188 A EL YSLNGYL Sbjct: 181 ARELAYSLNGYL 192 >tr|Q1B6K4|Q1B6K4_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 193 Score = 190 bits (482), Expect = 8e-47 Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%) Query: 6 NAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSH 65 ++P + +RIL AAA CV YGV+RVTLAEIARRA VSRPT+YRRW DT ++++ALLT+ Sbjct: 7 DSPRSVEERILDAAAECVVAYGVNRVTLAEIARRARVSRPTIYRRWRDTDAVLAALLTAR 66 Query: 66 VTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHS--DLARVYITERLGASQHF 123 + V+ AV RLR DE+V A++HS +LA VYITERLG SQ Sbjct: 67 IAGVLDAVPGSAVGREPLVDRIVRVGDRLRNDEIVIAVLHSAPELAMVYITERLGTSQQI 126 Query: 124 LLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYS 183 L++ LA +++AQ GSVR+G+PR+LAAM LLITQSTIQS ++ P+LD EAL+ EL S Sbjct: 127 LIDALAGEIKLAQDEGSVRSGEPRQLAAMCLLITQSTIQSAQMVAPLLDEEALSVELARS 186 Query: 184 LNGYL 188 LNGYL Sbjct: 187 LNGYL 191 >tr|A3Q1Y5|A3Q1Y5_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 193 Score = 190 bits (482), Expect = 8e-47 Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%) Query: 6 NAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSH 65 ++P + +RIL AAA CV YGV+RVTLAEIARRA VSRPT+YRRW DT ++++ALLT+ Sbjct: 7 DSPRSVEERILDAAAECVVAYGVNRVTLAEIARRARVSRPTIYRRWRDTDAVLAALLTAR 66 Query: 66 VTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHS--DLARVYITERLGASQHF 123 + V+ AV RLR DE+V A++HS +LA VYITERLG SQ Sbjct: 67 IAGVLDAVPGSAVGREPLVDRIVRVGDRLRNDEIVIAVLHSAPELAMVYITERLGTSQQI 126 Query: 124 LLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYS 183 L++ LA +++AQ GSVR+G+PR+LAAM LLITQSTIQS ++ P+LD EAL+ EL S Sbjct: 127 LIDALAGEIKLAQDEGSVRSGEPRQLAAMCLLITQSTIQSAQMVAPLLDEEALSVELARS 186 Query: 184 LNGYL 188 LNGYL Sbjct: 187 LNGYL 191 >tr|A1UIH1|A1UIH1_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 193 Score = 190 bits (482), Expect = 8e-47 Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 2/185 (1%) Query: 6 NAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSH 65 ++P + +RIL AAA CV YGV+RVTLAEIARRA VSRPT+YRRW DT ++++ALLT+ Sbjct: 7 DSPRSVEERILDAAAECVVAYGVNRVTLAEIARRARVSRPTIYRRWRDTDAVLAALLTAR 66 Query: 66 VTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHS--DLARVYITERLGASQHF 123 + V+ AV RLR DE+V A++HS +LA VYITERLG SQ Sbjct: 67 IAGVLDAVPGSAVGREPLVDRIVRVGDRLRNDEIVIAVLHSAPELAMVYITERLGTSQQI 126 Query: 124 LLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYS 183 L++ LA +++AQ GSVR+G+PR+LAAM LLITQSTIQS ++ P+LD EAL+ EL S Sbjct: 127 LIDALAGEIKLAQDEGSVRSGEPRQLAAMCLLITQSTIQSAQMVAPLLDEEALSVELARS 186 Query: 184 LNGYL 188 LNGYL Sbjct: 187 LNGYL 191 >tr|A4T253|A4T253_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium gilvum] Length = 191 Score = 177 bits (450), Expect = 4e-43 Identities = 97/190 (51%), Positives = 127/190 (66%), Gaps = 3/190 (1%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 M+S+ N+ E + RIL AAA C+R YGV+R T+ EIARRAGVSRPT+YRRWPD R +I+ Sbjct: 1 MMSIRNS-EPVEQRILDAAAECIRAYGVERTTVTEIARRAGVSRPTIYRRWPDIRWVIAE 59 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHS--DLARVYITERLG 118 +LT ++DV+ AV G LR D++V +++ + LA VYITERLG Sbjct: 60 VLTVRISDVLAAVPAAGPGREELVDRVVRIAEHLRRDDIVMSVIFNAPTLAMVYITERLG 119 Query: 119 ASQHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAA 178 SQ L++ LAA + Q GSVRAGDP ++ AM LLI QSTIQS +++ LD +AL A Sbjct: 120 TSQQLLIDTLAAAIVQGQAHGSVRAGDPHQMGAMCLLIAQSTIQSAQMVEKFLDRDALNA 179 Query: 179 ELTYSLNGYL 188 EL +SLNGYL Sbjct: 180 ELAHSLNGYL 189 >tr|A1TBJ2|A1TBJ2_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium vanbaalenii] Length = 192 Score = 177 bits (450), Expect = 4e-43 Identities = 95/190 (50%), Positives = 125/190 (65%), Gaps = 2/190 (1%) Query: 1 MLSMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 M+S+ N + RIL AAA+C+ YGV+R T+ EIARRA VSRPT+YRRWPD R +I+ Sbjct: 1 MVSIRNPERSVEQRILDAAAACILAYGVERTTMTEIARRARVSRPTIYRRWPDIRWVIAE 60 Query: 61 LLTSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHS--DLARVYITERLG 118 LLT +T V+ AV G LR DE+V++++ + LA YIT+RLG Sbjct: 61 LLTVRITGVLEAVPDRGAGRESVVGRVVAVADHLRADEIVQSVIRNAPGLAMTYITDRLG 120 Query: 119 ASQHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAA 178 SQ L++ LA ++ Q GS+RAGDPR +AAM LLITQSTIQS ++ +LD+EAL Sbjct: 121 TSQQILIDALAEAIKAGQDEGSIRAGDPRGMAAMCLLITQSTIQSAQMVAELLDNEALNE 180 Query: 179 ELTYSLNGYL 188 EL +SLNGYL Sbjct: 181 ELAHSLNGYL 190 >tr|C3JKC4|C3JKC4_RHOER Tax_Id=596309 SubName: Full=Regulatory protein, TetR;[Rhodococcus erythropolis SK121] Length = 212 Score = 142 bits (357), Expect = 2e-32 Identities = 78/182 (42%), Positives = 110/182 (60%), Gaps = 2/182 (1%) Query: 10 DIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDV 69 +I D IL AA SCV D+G+ R TLAEI+RRAGVSRPTVYRRWPDTR++++ LLT + V Sbjct: 24 EIDDVILDAARSCVLDFGMQRTTLAEISRRAGVSRPTVYRRWPDTRAVVADLLTREIRSV 83 Query: 70 VRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHFLLEG 127 + V+ +G ++R L + +D L YI +RLGASQ +LE Sbjct: 84 LPEVTFNGSAGTLLVEAIGDVVGQIRDHPLFVKIRQADQELLTTYIVDRLGASQKSILEL 143 Query: 128 LAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLNGY 187 + + + Q GS+R G ++AAMVLL+ QS + S ++P L S+A +L Y++ Y Sbjct: 144 ITSVVAAGQQDGSIREGSVNEIAAMVLLMAQSVVISAPTLEPELSSDASVEQLRYAVAAY 203 Query: 188 LA 189 LA Sbjct: 204 LA 205 >tr|C0ZYM2|C0ZYM2_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus erythropolis] Length = 212 Score = 141 bits (355), Expect = 4e-32 Identities = 77/182 (42%), Positives = 110/182 (60%), Gaps = 2/182 (1%) Query: 10 DIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDV 69 +I D IL AA SCV D+G+ R TLAEI+RRAGVSRPTVYRRWPDTR++++ LLT + V Sbjct: 24 EIDDVILDAARSCVLDFGMQRTTLAEISRRAGVSRPTVYRRWPDTRAVVADLLTREIRSV 83 Query: 70 VRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHFLLEG 127 + V+ G ++R L + H+D L YI +RLGASQ +LE Sbjct: 84 LPEVTFTGSAATLLVEAIGDVVGQIRDHPLFVKIRHADQELLTTYIVDRLGASQKSILEL 143 Query: 128 LAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLNGY 187 + + + Q GS+R G ++AAMVLL+ QS + S ++P L ++A +L +++ Y Sbjct: 144 ITSVVAAGQQDGSIREGSVNEIAAMVLLMAQSVVISAPTLEPELSADASVEQLRHAVAAY 203 Query: 188 LA 189 LA Sbjct: 204 LA 205 >tr|Q0S1Q3|Q0S1Q3_RHOSR Tax_Id=101510 SubName: Full=Probable transcriptional regulator, TetR family protein;[Rhodococcus sp.] Length = 210 Score = 139 bits (349), Expect = 2e-31 Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 2/189 (1%) Query: 3 SMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALL 62 S + + D IL AA SC+ D+G+ R TLAE+ARRAGVSRPTVYRRW DTR++++ L+ Sbjct: 8 SRDDTSASVEDSILDAARSCILDFGLRRTTLAEVARRAGVSRPTVYRRWSDTRAVVADLM 67 Query: 63 TSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGAS 120 T + V+ S++ +R L ++ SD L YI ERLG S Sbjct: 68 TREIAAVMPEFSVEESVHRQLVDAVVHVSTEVRDHPLFVKILRSDQELFTTYILERLGTS 127 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q +++ +A + Q GS+RAGD R +A MVLLI QS +QS ++ L +AL +L Sbjct: 128 QRAIIDQVAFAVSTGQDQGSIRAGDSRHIATMVLLIAQSAVQSAVMVAEELPGDALTEQL 187 Query: 181 TYSLNGYLA 189 +++ YLA Sbjct: 188 RHAVGAYLA 196 >tr|C1B377|C1B377_RHOOB Tax_Id=632772 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus opacus] Length = 222 Score = 138 bits (347), Expect = 3e-31 Identities = 76/189 (40%), Positives = 107/189 (56%), Gaps = 2/189 (1%) Query: 3 SMSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALL 62 S + + D IL AA SC+ D+G+ R TLAE+ARRAGVSRPTVYRRW DTR++++ L+ Sbjct: 21 SRDDTSASVEDAILDAARSCILDFGLRRTTLAEVARRAGVSRPTVYRRWSDTRAVVADLM 80 Query: 63 TSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGAS 120 T + V+ S +R L ++ SD L YI ERLG S Sbjct: 81 TREIAAVMPEFSTGESVHRQLVDAVVHVSTEVRDHPLFVKILRSDQELFTTYILERLGTS 140 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q +++ +A + Q GS+RAGD R++A MVLLI QS +QS ++ L +AL +L Sbjct: 141 QRVIIDQVAVAVSAGQDQGSIRAGDSRRIATMVLLIAQSAVQSAVMVAEELPGDALTEQL 200 Query: 181 TYSLNGYLA 189 ++ YLA Sbjct: 201 RLAVGAYLA 209 >tr|B1MH76|B1MH76_MYCA9 Tax_Id=561007 SubName: Full=Putative transcriptional regulator, TetR family;[Mycobacterium abscessus] Length = 205 Score = 134 bits (336), Expect = 6e-30 Identities = 76/182 (41%), Positives = 108/182 (59%), Gaps = 3/182 (1%) Query: 9 EDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTD 68 + + +RIL AA SCV ++GV R TL E+A+RAGVSRP+VYRRWPD R++++ LLT + Sbjct: 23 DPVTERILDAALSCVTEFGVRRTTLVEVAKRAGVSRPSVYRRWPDVRTLVAELLTREMGS 82 Query: 69 VVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHFLLE 126 ++ A G ++R + A++ SD L YI +RLG SQ L+ Sbjct: 83 ILPATG-RGCARERLVRSVTGLVTQVREHSIFAAILRSDPELLLTYIVQRLGTSQRALIG 141 Query: 127 GLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLNG 186 A + Q GS+RAG P ++AAMVLLI QS +QS I+ IL + L EL +++G Sbjct: 142 WTAMLIVEGQADGSIRAGIPEQMAAMVLLIGQSVLQSARIVADILSPDELVDELATAIDG 201 Query: 187 YL 188 YL Sbjct: 202 YL 203 >tr|Q5Z052|Q5Z052_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 222 Score = 130 bits (328), Expect = 5e-29 Identities = 73/178 (41%), Positives = 107/178 (60%), Gaps = 3/178 (1%) Query: 15 ILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVVRAVS 74 I AA +CV ++GV R TL E+ARRAGVSRPTVYRRWPDT S+++ LL + +++ A + Sbjct: 39 IFDAARACVAEFGVRRTTLTEVARRAGVSRPTVYRRWPDTGSLVAELLVRELREILGATT 98 Query: 75 -LDGHXXXXXXXXXXXXXXRLRGDELVKALMH--SDLARVYITERLGASQHFLLEGLAAR 131 + G R+R + L + +DL Y+ RLG +Q L++ AA Sbjct: 99 PVAGDGRARLVGSVVTGAARIRENPLFAKIFRTDTDLMLTYVFGRLGRNQRALIDLFAAG 158 Query: 132 LQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLNGYLA 189 ++ Q GS+R G+P +LAAM+LLI QS +QS + +L ++ L AEL ++ GYLA Sbjct: 159 IRAGQADGSIRPGEPVQLAAMLLLIAQSAVQSAGTVAGLLPADRLDAELGRAIEGYLA 216 >tr|A8L5Z5|A8L5Z5_FRASN Tax_Id=298653 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp.] Length = 279 Score = 120 bits (301), Expect = 7e-26 Identities = 76/183 (41%), Positives = 103/183 (56%), Gaps = 8/183 (4%) Query: 15 ILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSH----VTDVV 70 +L AAA+ + GV R T ++ARRAGVSR T+YRRWPD RS++ ++T VT Sbjct: 49 VLDAAAASLLSVGVRRTTATDVARRAGVSRMTLYRRWPDLRSLVGDVMTREWGRIVTAAA 108 Query: 71 RAV--SLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHFLLE 126 RA SL R + L + ++ +D L Y+ ERLGA+Q +LE Sbjct: 109 RAAEPSLAAGTRAGLVRYLVTAAQTFRANPLFRKIIETDPELLVPYVLERLGATQRLVLE 168 Query: 127 GLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLNG 186 L +L+ AQ G+VRAGDP A MVLL+ QS + S D + + EALA EL +L+G Sbjct: 169 LLCEQLREAQAGGAVRAGDPAAQARMVLLVVQSYVLSADALGDEITEEALARELYLTLDG 228 Query: 187 YLA 189 YLA Sbjct: 229 YLA 231 >tr|Q0RQE6|Q0RQE6_FRAAA Tax_Id=326424 SubName: Full=Putative TetR-family transcriptional regulator;[Frankia alni] Length = 232 Score = 111 bits (278), Expect = 3e-23 Identities = 71/186 (38%), Positives = 100/186 (53%), Gaps = 9/186 (4%) Query: 13 DRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVVRA 72 D +L AA + + GV R TL E+ARRAGVSR T+YRRWPD RS++ ++T T VV A Sbjct: 24 DAVLDAAKASLLAVGVRRTTLTEVARRAGVSRMTLYRRWPDLRSLVGDVMTREWTRVVTA 83 Query: 73 VSL-------DGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHF 123 + G R + + ++ +D L Y+TER GA+Q Sbjct: 84 AAARPTAPDRSGGDLDDLVDHIIATVEAFRTNPVYLRIIETDPELLLPYLTERRGATQQM 143 Query: 124 LLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYS 183 +++ LA +L A +G+VR +P LA MVLL+ QS + S D + + + LAAEL Sbjct: 144 IIDLLAGQLDAAARSGTVRPVEPAALAVMVLLVVQSFVLSADALAGPVPAATLAAELRRL 203 Query: 184 LNGYLA 189 L GYLA Sbjct: 204 LRGYLA 209 >tr|D0L9A6|D0L9A6_GORB4 Tax_Id=526226 SubName: Full=Regulatory protein TetR;[Gordonia bronchialis] Length = 211 Score = 110 bits (276), Expect = 6e-23 Identities = 78/194 (40%), Positives = 101/194 (52%), Gaps = 10/194 (5%) Query: 4 MSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLT 63 MS E+IGD +L AA C+ RVT++E+AR AGVSRPTVYRRW D I+ LLT Sbjct: 1 MSIRNEEIGDLVLDAARRCLIRSAGRRVTVSEVAREAGVSRPTVYRRWLDITGIVRTLLT 60 Query: 64 SHVTDVVRAV-------SLDGHXXXXXXXXXXXXXXRLRGDELVKALMHS--DLARVYIT 114 V V V S G LR ++L+ +L D Y+ Sbjct: 61 REVLGTVEGVVGGRLTDSSAGPGIDDLPGAIVEVVAALRANQLISSLWQEQRDFMAPYMF 120 Query: 115 ERLGASQHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSE 174 ERLG SQ +L LA L AQ VR GD +++AAMVLLI QS +QS ++ IL ++ Sbjct: 121 ERLGTSQQGVLALLADLLAQAQTRALVRPGDTKQMAAMVLLIAQSFLQSGALVSDIL-AD 179 Query: 175 ALAAELTYSLNGYL 188 EL + + GYL Sbjct: 180 DWRPELRHVIAGYL 193 >tr|Q2JEG6|Q2JEG6_FRASC Tax_Id=106370 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp.] Length = 208 Score = 107 bits (266), Expect = 8e-22 Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 13/190 (6%) Query: 13 DRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVVRA 72 + +L AA + + GV R TL E+ARRAGVSR T+YRRWPD RS++ ++T T VV A Sbjct: 7 EAVLDAAKASLLAVGVRRTTLTEVARRAGVSRMTLYRRWPDLRSLVGDVMTREWTQVVTA 66 Query: 73 VSL-----------DGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGA 119 S DG R + L ++ +D L Y+ ER GA Sbjct: 67 ASAMAQAGPDGGPPDGGLVDDLVEHIIATVEAFRTNPLYLRIIETDPELLIPYLIERRGA 126 Query: 120 SQHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAE 179 +Q +L+ L ++ + A+ G+VR DP LA MVLL+ QS + S + + + + AE Sbjct: 127 TQQMILDLLTSQFRTAEANGAVRPEDPSALALMVLLVVQSFVLSAEALGCGVPAATRTAE 186 Query: 180 LTYSLNGYLA 189 L L GYLA Sbjct: 187 LRRLLRGYLA 196 >tr|A4X825|A4X825_SALTO Tax_Id=369723 SubName: Full=Regulatory protein, TetR;[Salinispora tropica] Length = 197 Score = 103 bits (257), Expect = 9e-21 Identities = 68/183 (37%), Positives = 95/183 (51%), Gaps = 5/183 (2%) Query: 11 IGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVV 70 I D +L AA CV YGV R T+ ++ARRAGVSR TVYRRWPD +S+I L+T V+ Sbjct: 12 IEDAVLDAARDCVLAYGVRRTTVTDVARRAGVSRMTVYRRWPDVQSLIGDLMTREWQQVL 71 Query: 71 RAVSLD---GHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHFLL 125 A + D GH LR L+ + D + Y+ +R GA Q +L Sbjct: 72 LAAATDEGTGHARSRLVERVVAGARVLREHPLLCKIRDVDPEVLIPYLLDRRGAGQEEML 131 Query: 126 EGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLN 185 L + + GSVR+G+ +A +VLL TQS + S + L + +L EL ++ Sbjct: 132 RFLVDAVAHGRADGSVRSGEAETMARVVLLTTQSFVLSARTVADGLPAASLDRELARLVD 191 Query: 186 GYL 188 GYL Sbjct: 192 GYL 194 >tr|A8M5P3|A8M5P3_SALAI Tax_Id=391037 SubName: Full=Transcriptional regulator, TetR family;[Salinispora arenicola] Length = 197 Score = 99.8 bits (247), Expect = 1e-19 Identities = 67/183 (36%), Positives = 91/183 (49%), Gaps = 5/183 (2%) Query: 11 IGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVV 70 I D +L AA CV YGV R T+ ++ARRAGVSR TVYRRWPD +S+I L+T V+ Sbjct: 12 IEDTVLDAAGDCVLAYGVRRTTVTDVARRAGVSRMTVYRRWPDVQSMIGDLMTREWQRVL 71 Query: 71 RAVSL---DGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHFLL 125 A + DGH +R L+ + D + Y+ +R GA Q +L Sbjct: 72 LATAADEGDGHARSRLVARVVAGARVMREHPLLCKIRDVDPEVLIPYLFDRRGAGQEDML 131 Query: 126 EGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLN 185 L A + GSVR GD +A MV L TQS + S + + + EL ++ Sbjct: 132 RFLVAAVADGAADGSVRPGDAEVMARMVFLTTQSFVLSARTVVDGVSFASFDRELARLVD 191 Query: 186 GYL 188 GYL Sbjct: 192 GYL 194 >tr|D1ACN2|D1ACN2_THECU Tax_Id=471852 SubName: Full=Transcriptional regulator, TetR family;[Thermomonospora curvata DSM 43183] Length = 197 Score = 94.7 bits (234), Expect = 4e-18 Identities = 66/183 (36%), Positives = 87/183 (47%), Gaps = 10/183 (5%) Query: 13 DRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVVRA 72 D +L AA CV GV R TL +IARRAGVSR T+YRRWPD RSI++ L+T T + Sbjct: 12 DAVLDAARECVLAVGVRRTTLTDIARRAGVSRMTLYRRWPDVRSIVADLMTREWTALAAE 71 Query: 73 VS-----LDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHFLL 125 +S G LR L++ ++ D L Y+ R GASQ Sbjct: 72 ISAAGRDASGPARRALVDNLVEGVRALRDHPLLRKIVDVDPELLLPYVLHRQGASQRAFC 131 Query: 126 EGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLN 185 L ++ GS+R GDP + A +LLI QS S I + D+E A + L Sbjct: 132 RILEEAVRAGHADGSIRRGDPVRQARALLLIAQSFALSAPI---VTDAEHTAGDFDAELR 188 Query: 186 GYL 188 L Sbjct: 189 EIL 191 >tr|A4F7H9|A4F7H9_SACEN Tax_Id=405948 SubName: Full=TetR-family transcriptional regulator;[Saccharopolyspora erythraea] Length = 243 Score = 94.4 bits (233), Expect = 6e-18 Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 6/188 (3%) Query: 7 APEDIGD-RILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSH 65 AP +GD +L AA CV D GV R TLAEIARRA VSR T+YRR+PD S+++AL+T+ Sbjct: 48 APNRVGDAELLTAARECVLDLGVRRSTLAEIARRARVSRMTLYRRFPDVDSLVTALMTTE 107 Query: 66 VTDVV---RAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGAS 120 +++ RA G LR L++ ++ +D L Y+ E+LG++ Sbjct: 108 FAEILHHARAAEGTGSARNRLVNAVLRCVRLLRSAPLLRRVLETDAELLLPYLVEQLGST 167 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAEL 180 Q L L GS+R DP + +L+ QS + S + +D ALA EL Sbjct: 168 QLAAERFLRDYLVQGHLDGSIRRADPAAQSRALLMTLQSFVVSTGPAETGVDPAALAEEL 227 Query: 181 TYSLNGYL 188 + L+ L Sbjct: 228 AHLLDAAL 235 >tr|C7MZR3|C7MZR3_SACVD Tax_Id=471857 SubName: Full=Transcriptional regulator;[Saccharomonospora viridis] Length = 212 Score = 91.7 bits (226), Expect = 4e-17 Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 9/187 (4%) Query: 5 SNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTS 64 S P+D+ +L AA +CV GV R TL +IAR AGVSR T+YRR+PD RS+++AL+T Sbjct: 24 SRVPDDV---LLDAARTCVLTTGVRRTTLTDIARTAGVSRMTLYRRFPDVRSVLAALMTR 80 Query: 65 HVTDVVRAVSLDGH----XXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLG 118 ++R V+ + L D L++ ++ D L YITERLG Sbjct: 81 EFGALLRRVTAEIDTALPARRRLVELGTAAVRALTTDPLLRTVLDKDAELLLPYITERLG 140 Query: 119 ASQHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAA 178 ++Q + + ++ GSVR G P A +LL QS I S + EAL + Sbjct: 141 STQLLAEDVVDGLVRAGHADGSVRRGKPEVQARALLLTVQSFILSWRPATENVPDEALLS 200 Query: 179 ELTYSLN 185 EL + L+ Sbjct: 201 ELRHLLD 207 >tr|Q9RJ96|Q9RJ96_STRCO Tax_Id=1902 SubName: Full=Putative TetR-family transcriptional regulator;[Streptomyces coelicolor] Length = 205 Score = 90.9 bits (224), Expect = 6e-17 Identities = 71/192 (36%), Positives = 88/192 (45%), Gaps = 11/192 (5%) Query: 8 PEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSH-- 65 P D D +L A CV GV R T+ ++ARRAGVSR T+YRRWPD RS++ L+T Sbjct: 14 PSD-SDTVLDAVRDCVLAVGVRRTTMTDVARRAGVSRMTLYRRWPDVRSLVGDLMTREWI 72 Query: 66 --VTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQ 121 T V D R L + ++ D L Y+ +R GASQ Sbjct: 73 AVATGAVTEPGQDTDARSRMVEGLVAGVAAFRAHPLFRKIVDVDPELLLPYVLDRRGASQ 132 Query: 122 HFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSV----DIIDPILDSEALA 177 LLE LA L+ GSVR + A VLL+ QS S+ D D L AL Sbjct: 133 EALLELLADSLEEGHADGSVRRTHTGRQARSVLLVVQSFALSLRTMADEDDAELTPAALL 192 Query: 178 AELTYSLNGYLA 189 AEL L LA Sbjct: 193 AELRTILERTLA 204 >tr|A0AD60|A0AD60_STRAM Tax_Id=278992 SubName: Full=Putative TetR-family transcriptional regulator;[Streptomyces ambofaciens ATCC 23877] Length = 205 Score = 90.9 bits (224), Expect = 6e-17 Identities = 68/178 (38%), Positives = 84/178 (47%), Gaps = 10/178 (5%) Query: 13 DRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSH----VTD 68 D +L A CV GV R T+ ++ARRAGVSR T+YRRWPD RS++ L+T T Sbjct: 18 DTVLDAVRDCVLAVGVRRTTMTDVARRAGVSRMTLYRRWPDVRSLVGDLMTREWIAVATG 77 Query: 69 VVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHFLLE 126 + A R L + ++ D L Y+ +R GASQ LLE Sbjct: 78 AIPAPRPGVGTRSRVVEGLVTGIEAFRAHPLFRKIVDVDPELLLPYVLDRRGASQEALLE 137 Query: 127 GLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSV----DIIDPILDSEALAAEL 180 LA L GSVR P + A VLLI QS S+ D D L S AL AEL Sbjct: 138 LLADALGEGHADGSVRPAHPGRQARSVLLIVQSFALSLRTMTDEDDAELTSAALLAEL 195 >tr|C1YHN4|C1YHN4_NOCDA Tax_Id=446468 SubName: Full=Transcriptional regulator, tetR family;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 177 Score = 90.5 bits (223), Expect = 8e-17 Identities = 61/170 (35%), Positives = 83/170 (48%), Gaps = 14/170 (8%) Query: 30 RVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVVRAVSLDGHXXXXXXXXXXX 89 R TL ++ARRAGVSRPTVYRRWPD ++++ LLT + ++ A DG Sbjct: 3 RTTLTDVARRAGVSRPTVYRRWPDATALVADLLTRELRRIL-ADQGDGPGGPAGEDVRAR 61 Query: 90 XXXRLRGDELVKALM-----------HSDLARVYITERLGASQHFLLEGLAARLQVAQGT 138 G + +AL+ +L Y +RLG S LE + + Q Sbjct: 62 LVRHAAG--VARALLAHPLFVRIVDTEPELLATYTFQRLGTSHRAALELVEPVVAEGQRD 119 Query: 139 GSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLNGYL 188 GSVRAGDP LA +VL+ Q T+ S + + D L EL L+GYL Sbjct: 120 GSVRAGDPAVLARLVLVTVQGTVTSRRLFADVTDESGLVDELAALLDGYL 169 >tr|A1SQK1|A1SQK1_NOCSJ Tax_Id=196162 SubName: Full=Regulatory protein, TetR;[Nocardioides sp.] Length = 200 Score = 88.6 bits (218), Expect = 3e-16 Identities = 67/188 (35%), Positives = 92/188 (48%), Gaps = 9/188 (4%) Query: 6 NAPE--DIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLT 63 NAP+ + D L AA +C+ D G R TL E+ARRAGVSR T+YR W D +++ L+T Sbjct: 7 NAPDRAEPRDGYLDAARACILDVGWRRTTLTEVARRAGVSRMTIYRTWADMPRLLADLMT 66 Query: 64 ----SHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERL 117 S V D + RLR +EL ++ D L Y+ R Sbjct: 67 REWGSVVADSLADEDPAAPTVDRLVGDIVQTVQRLRENELFVRIVELDPELILPYLFSRR 126 Query: 118 GASQHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSV-DIIDPILDSEAL 176 G SQ +LE A L+ AQ G+ RAGDP +A +LL + S ++D + E L Sbjct: 127 GRSQDSILERTVAALRDAQAEGAARAGDPVAMARAMLLAAHGFVLSAHTMVDDDVSVEDL 186 Query: 177 AAELTYSL 184 AEL +L Sbjct: 187 DAELVLAL 194 >tr|C4ENA2|C4ENA2_STRRS Tax_Id=479432 SubName: Full=Transcriptional regulator, tetR family;[Streptosporangium roseum DSM 43021] Length = 188 Score = 87.4 bits (215), Expect = 7e-16 Identities = 62/179 (34%), Positives = 86/179 (48%), Gaps = 7/179 (3%) Query: 12 GDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVVR 71 GD +L AA V GV R TL ++ARRAG+SR T+YRRWPD R +++ L+T V Sbjct: 13 GDPVLDAAREMVLAVGVRRTTLTDVARRAGLSRMTIYRRWPDVRGLVADLMTREWVLVAS 72 Query: 72 AVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHFLLEGLA 129 + + LR L + ++ D L Y+ R G+S +L + Sbjct: 73 RFATE-----DPITAAVGVVRELRDHPLWRKIVEVDPELLLPYLLHRRGSSHEAMLALVE 127 Query: 130 ARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLNGYL 188 + + Q G+VR GDP LA VLL QS + S + L + L AEL L YL Sbjct: 128 SAIARGQALGTVRPGDPGTLARSVLLTAQSFLLSGPTMLGPLTQDDLDAELATLLERYL 186 >tr|B5H6M4|B5H6M4_STRPR Tax_Id=457429 SubName: Full=TetR-family transcriptional regulator;[Streptomyces pristinaespiralis ATCC 25486] Length = 199 Score = 82.8 bits (203), Expect = 2e-14 Identities = 58/156 (37%), Positives = 75/156 (48%), Gaps = 10/156 (6%) Query: 12 GDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVVR 71 GD +L AA CV GV R TL +IARRAGVSR T+YRRWPD R+++ L+T + Sbjct: 11 GDAVLDAARDCVLAVGVRRTTLTDIARRAGVSRMTLYRRWPDVRTLVGDLMTREW--IAL 68 Query: 72 AVSLDGHXXXXXXXXXXXXXXRLRGDELVKA--LMHS------DLARVYITERLGASQHF 123 AV + G +A L H +L Y+ +R GASQ Sbjct: 69 AVGAMPEPEPGASARQRLVEGLVAGVTAFRAHPLFHKIIDVDPELLLPYVLDRRGASQDA 128 Query: 124 LLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQS 159 LL +A L GSVR P + A +LL+ QS Sbjct: 129 LLGLIAGGLAEGHADGSVRRSHPDRQARSLLLVVQS 164 >tr|C7QJ53|C7QJ53_CATAD Tax_Id=479433 SubName: Full=Transcriptional regulator, TetR family;[Catenulispora acidiphila] Length = 208 Score = 79.7 bits (195), Expect = 1e-13 Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 10/185 (5%) Query: 13 DRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVVR- 71 D+IL AA S + D G+ TLAE+ARRAG SR T+YRR+PD ++++ +L + VVR Sbjct: 9 DKILDAAQSALLDLGLRNTTLAEVARRAGASRMTLYRRYPDIDALLTEVLGRQLIRVVRR 68 Query: 72 -----AVSLDGHXXXXXXXXXXXXXXR-LRGDELVKALMHSDLARV--YITERLGASQHF 123 ++ G R GD L+ ++ SD + Y+T G QH+ Sbjct: 69 NAGLQELAGGGRSARDLLVTGTVEVVRAFHGDLLMHKILESDAEFLLPYMTREFGPLQHY 128 Query: 124 LLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYS 183 L+ L+ RL+ S+R G A VLL QS + S + + L EL Sbjct: 129 ALDLLSMRLEQGHEDTSIRHGSVALQARTVLLTAQSFVISARAAGSV-PMDRLLEELREM 187 Query: 184 LNGYL 188 L+ YL Sbjct: 188 LDAYL 192 >tr|C1WM04|C1WM04_9ACTO Tax_Id=479435 SubName: Full=Transcriptional regulator, COG1309;[Kribbella flavida DSM 17836] Length = 217 Score = 78.2 bits (191), Expect = 4e-13 Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 4/179 (2%) Query: 14 RILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSH-VTDVVRA 72 RIL AA + G+ R+T+A+IAR A VSR T+YRRWP+ +++++AL+T T +V A Sbjct: 33 RILDAAYELLLAIGMRRMTMADIARHAEVSRATLYRRWPNVQAVVAALMTREWTTALVSA 92 Query: 73 VSLDG-HXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGASQHFLLEGLA 129 D + R L++ ++ D Y+ ER G+S L +A Sbjct: 93 FQPDAVDGRARLVEGVVEVVAKTRTHPLMRKIIELDPEFLTPYLLERRGSSTVAHLALVA 152 Query: 130 ARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSLNGYL 188 ++ Q GS+RAGDP L+ ++L++ ++ S ++ + L EL L YL Sbjct: 153 EGIKAGQADGSIRAGDPDWLSRQIILVSLASAVSGPVLATADEYPRLDDELRTMLTRYL 211 >tr|D0YS27|D0YS27_9ACTO Tax_Id=596328 SubName: Full=Transcriptional regulator, TetR family protein;[Mobiluncus mulieris 28-1] Length = 191 Score = 74.3 bits (181), Expect = 6e-12 Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 7/186 (3%) Query: 5 SNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTS 64 ++ P+ +I+ AA C+ G+ R T+ ++ARRAGVSRPTVYR++ IIS LT Sbjct: 10 TSEPDPSAAKIIAAARVCLIRNGM-RTTITDVARRAGVSRPTVYRKFFTLEEIISETLTQ 68 Query: 65 HVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALM--HSDLARVYITERLGASQH 122 + ++ V+ + R+R +EL++A++ +L Y RLG SQ Sbjct: 69 EMVGMLGDVA-NPTSTKEFIEIIVDVTNRVRRNELMRAILSEEPELLVTYQFHRLGRSQL 127 Query: 123 FLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTY 182 +++ L L+ G S +P++ A +L++ QS + + D + EL Sbjct: 128 AIIDVLERMLRALPGLSS---ENPKQQALFILMLVQSVAFMANTVSEYFDDASWKEELRK 184 Query: 183 SLNGYL 188 L GYL Sbjct: 185 MLKGYL 190 >tr|C2KRN5|C2KRN5_9ACTO Tax_Id=585199 SubName: Full=Transcriptional regulator;[Mobiluncus mulieris ATCC 35243] Length = 191 Score = 74.3 bits (181), Expect = 6e-12 Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 7/186 (3%) Query: 5 SNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTS 64 ++ P+ +I+ AA C+ G+ R T+ ++ARRAGVSRPTVYR++ IIS LT Sbjct: 10 TSEPDPSAAKIIAAARVCLIRNGM-RTTITDVARRAGVSRPTVYRKFFTLEEIISETLTQ 68 Query: 65 HVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALM--HSDLARVYITERLGASQH 122 + ++ V+ + R+R +EL++A++ +L Y RLG SQ Sbjct: 69 EMVGMLGDVA-NPTSTKEFIEIIVDVTNRVRRNELMRAILSEEPELLVTYQFHRLGRSQL 127 Query: 123 FLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTY 182 +++ L L+ G S +P++ A +L++ QS + + D + EL Sbjct: 128 AIIDVLERMLRALPGLSS---ENPKQQALFILMLVQSVAFMANTVSEYFDDASWKEELRK 184 Query: 183 SLNGYL 188 L GYL Sbjct: 185 MLKGYL 190 >tr|A4FGQ5|A4FGQ5_SACEN Tax_Id=405948 SubName: Full=TetR-family transcriptional regulator;[Saccharopolyspora erythraea] Length = 208 Score = 71.6 bits (174), Expect = 4e-11 Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 14/184 (7%) Query: 14 RILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLT-------SHV 66 RIL AA + G+ R+T+A+IARRA VSR T+YRRWP+ RS++ L+T + Sbjct: 28 RILDAAYELLLAIGLRRMTMADIARRAEVSRATLYRRWPNVRSVVGTLMTREWGALGTAA 87 Query: 67 TDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKAL--MHSDLARVYITERLGASQHFL 124 + R + G +R + +++ + + D Y+ +R GAS Sbjct: 88 FEAPRTSARQG-----LVDGIVHIAGTIRTNPMLRRIIELDPDFLLPYLLQRRGASTDQQ 142 Query: 125 LEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPILDSEALAAELTYSL 184 L + L+ Q GSVRAGD A +LL S + + ++ + AL +L L Sbjct: 143 LAMMELALREGQQDGSVRAGDVTMQARALLLTAWSFVLTGPVVAGEHELPALDEQLREML 202 Query: 185 NGYL 188 + YL Sbjct: 203 DRYL 206 >tr|C2BRV0|C2BRV0_9ACTO Tax_Id=548479 SubName: Full=TetR family transcriptional regulator;[Mobiluncus curtisii ATCC 43063] Length = 204 Score = 65.9 bits (159), Expect = 2e-09 Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 7/189 (3%) Query: 6 NAPEDIG-DRILQAAA--SCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALL 62 + P+++ D+ ++ AA S +R+ G R T+A++AR AGVSRPTVY R+ + + + L Sbjct: 15 HTPDEMAIDQAIEKAARDSLIRN-GFSRTTIAQVAREAGVSRPTVYARYHNVTQLAADTL 73 Query: 63 TSHVTDVVRAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSD--LARVYITERLGAS 120 T + + + + L+ +EL+ A++ D L + Y +RLG Sbjct: 74 TRELLPLAQRLQTVPQTVEELVKILVQAAHDLQQNELLAAMIERDPQLLQTYQFQRLGRV 133 Query: 121 QHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPIL-DSEALAAE 179 Q ++ LA L+ +R DPR LAA+V++ Q+ +I + D++ + Sbjct: 134 QTRFIDLLAQILEQMSRNTELRDEDPRVLAAIVVVSVQTAAVQQNIFRAVRDDADVWTKQ 193 Query: 180 LTYSLNGYL 188 L L YL Sbjct: 194 LEVLLKEYL 202 >tr|B1MJF8|B1MJF8_MYCA9 Tax_Id=561007 SubName: Full=Putative TetR-family transcriptional regulator;[Mycobacterium abscessus] Length = 200 Score = 61.2 bits (147), Expect = 5e-08 Identities = 30/73 (41%), Positives = 44/73 (60%) Query: 4 MSNAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLT 63 MS P+ G+RIL+AA + +G+ R T+ EIARRAGVS TVYRRW + ++ A+L Sbjct: 1 MSADPDPTGERILEAALQTMLSFGIRRATVDEIARRAGVSHMTVYRRWSNKTDLVLAVLM 60 Query: 64 SHVTDVVRAVSLD 76 + +V + Sbjct: 61 REAQAIFTSVDAE 73 >tr|Q5YQE3|Q5YQE3_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 217 Score = 58.2 bits (139), Expect = 4e-07 Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 11/184 (5%) Query: 2 LSMSNAPEDIGD-RILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISA 60 L ++ PED R+L AA D+G+ R ++ E+ARR G+S T+YRR+ +I A Sbjct: 10 LVRNSGPEDTNQSRVLDAALLAFLDFGIKRTSMVEVARRCGLSLATLYRRFASKNDLIEA 69 Query: 61 LLTSHVTDVV--------RAVSLDGHXXXXXXXXXXXXXXRLRGDELVKALM--HSDLAR 110 + D + R V D LR ++LV L+ +L Sbjct: 70 VALRQTRDFITGVDEVLARQVDRDAGAEDQIVELFVAFLKGLRENQLVHRLLATEPELVL 129 Query: 111 VYITERLGASQHFLLEGLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVDIIDPI 170 ++T R + L+ ++ Q G + A DP LA M+ S + + P+ Sbjct: 130 PFLTVRGAPIIELGRDYLSEFIRRLQDEGKLPAYDPEPLAEMIARTAVSMALTPQTVIPL 189 Query: 171 LDSE 174 D E Sbjct: 190 GDDE 193 >tr|B4X501|B4X501_9GAMM Tax_Id=236097 SubName: Full=Transcriptional regulator, TetR family protein;[Alcanivorax sp. DG881] Length = 208 Score = 57.8 bits (138), Expect = 6e-07 Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 7/164 (4%) Query: 13 DRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSHVTDVVRA 72 ++IL A + ++G+ R T+ ++A RAG+ R T YRR+ D +I ++ + Sbjct: 25 EKILDAGLALFVEFGLRRTTMEDVATRAGIGRATAYRRFADKDQLIQVVILRECQQQLAM 84 Query: 73 VSLD----GHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARV--YITERLGASQHFLLE 126 + D R L+K L+ S+ + +T+RL F Sbjct: 85 IESDLEKVDDGLERVLESFVLAVTRAHRHPLLKRLLTSEPETILPLLTQRLWQMMGFFRI 144 Query: 127 GLAARLQVAQGTGSVRAGDPRKLAAMVLLITQSTIQSVD-IIDP 169 LA LQV Q G++R +A ++L + QS + S D I++P Sbjct: 145 YLAGLLQVEQDNGAIRQQPMEPMAELMLRLMQSMVLSPDGILNP 188 >tr|A1T3Q7|A1T3Q7_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium vanbaalenii] Length = 195 Score = 55.8 bits (133), Expect = 2e-06 Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 8/178 (4%) Query: 6 NAPEDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRWPDTRSIISALLTSH 65 N P + IL+AAA V GV R+++ +AR+AGVSR T+YRR+P TR + L Sbjct: 8 NTPTEQESAILKAAAEEVALVGVGRLSMDVVARQAGVSRSTLYRRFP-TRDALITELGRQ 66 Query: 66 VTDVVRA----VSLDGHXXXXXXXXXXXXXXRLRGDELVKALMHSDLARVYITERLGASQ 121 D A V++D L G+ +++ + D TE + ++ Sbjct: 67 TFDFAMARLQTVAIDSGPQQAAVAAFTEGVRLLTGEPVMRRFLQLDREFTATTEMVEEAR 126 Query: 122 HFLLEGLAARLQVAQGTGSVRAGDPRKLAAMV-LLITQSTIQ-SVDIIDPILDSEALA 177 FL+ A + + G+ D A + + + S +Q S D++D + D EA+A Sbjct: 127 LFLVSAATAMAKALRAAGAGMPDDELLAVAEIHIRLAASLVQVSSDVLD-VGDDEAVA 183 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.321 0.134 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,087,428,655 Number of extensions: 34340528 Number of successful extensions: 121867 Number of sequences better than 10.0: 3800 Number of HSP's gapped: 122737 Number of HSP's successfully gapped: 3806 Length of query: 189 Length of database: 3,846,993,858 Length adjustment: 129 Effective length of query: 60 Effective length of database: 2,392,492,671 Effective search space: 143549560260 Effective search space used: 143549560260 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 76 (33.9 bits)