BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_3605 (934 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HL43|B2HL43_MYCMM Tax_Id=216594 SubName: Full=ATP-dependent... 1652 0.0 tr|Q938A0|Q938A0_MYCAV Tax_Id=1764 SubName: Full=Putative relaxa... 1154 0.0 tr|A1UPD8|A1UPD8_MYCSK Tax_Id=189918 SubName: Full=ATP-dependent... 897 0.0 tr|A4TGK3|A4TGK3_MYCGI Tax_Id=350054 SubName: Full=ATP-dependent... 891 0.0 tr|A4TGJ8|A4TGJ8_MYCGI Tax_Id=350054 SubName: Full=ATP-dependent... 887 0.0 tr|B2I411|B2I411_MYCMM Tax_Id=216594 SubName: Full=ATP-dependent... 828 0.0 tr|B1MAE8|B1MAE8_MYCA9 Tax_Id=561007 SubName: Full=TraA/ATP-depe... 828 0.0 tr|Q8FLJ3|Q8FLJ3_COREF Tax_Id=152794 SubName: Full=Putative conj... 402 e-109 tr|C8NSP3|C8NSP3_COREF Tax_Id=196164 SubName: Full=Putative unch... 402 e-109 tr|Q8VVJ4|Q8VVJ4_CORGL Tax_Id=1718 (traA)SubName: Full=TraA prot... 400 e-109 tr|Q0ZKD7|Q0ZKD7_9CORY Tax_Id=373068 SubName: Full=Putative unch... 399 e-109 tr|Q8FLG9|Q8FLG9_COREF Tax_Id=152794 SubName: Full=Putative conj... 394 e-107 tr|Q9EUN8|Q9EUN8_CORGL Tax_Id=1718 (traA)SubName: Full=Transfer ... 394 e-107 tr|Q84GD9|Q84GD9_CORGL Tax_Id=1718 (traA)SubName: Full=TraA;[Cor... 393 e-107 tr|Q8RMJ7|Q8RMJ7_CORDI Tax_Id=1717 (traA)SubName: Full=TraA;[Cor... 391 e-106 tr|C8NKP5|C8NKP5_COREF Tax_Id=196164 SubName: Full=Putative unch... 352 2e-94 tr|C0U9P2|C0U9P2_9ACTO Tax_Id=526225 SubName: Full=DNA primase;[... 271 4e-70 tr|A1SH09|A1SH09_NOCSJ Tax_Id=196162 SubName: Full=DNA primase c... 248 3e-63 tr|A1SC49|A1SC49_NOCSJ Tax_Id=196162 SubName: Full=DNA primase c... 241 3e-61 tr|A1SIX0|A1SIX0_NOCSJ Tax_Id=196162 SubName: Full=DNA primase c... 241 4e-61 tr|D1BY40|D1BY40_9MICO Tax_Id=446471 SubName: Full=TrwC relaxase... 239 1e-60 tr|D0LFJ6|D0LFJ6_GORB4 Tax_Id=526226 SubName: Full=TrwC relaxase... 238 3e-60 tr|C7NLP0|C7NLP0_KYTSD Tax_Id=478801 SubName: Full=TrwC relaxase... 234 5e-59 tr|Q5U9L8|Q5U9L8_NOCSJ Tax_Id=196162 SubName: Full=Putative TraA... 231 5e-58 tr|C5C807|C5C807_MICLC Tax_Id=465515 SubName: Full=Conjugative r... 229 2e-57 tr|A4T240|A4T240_MYCGI Tax_Id=350054 SubName: Full=ATP-dependent... 225 2e-56 tr|Q70K35|Q70K35_9ACTO Tax_Id=158898 SubName: Full=Putative TraA... 224 4e-56 tr|Q1BC42|Q1BC42_MYCSS Tax_Id=164756 SubName: Full=ATP-dependent... 224 6e-56 tr|A1UCV2|A1UCV2_MYCSK Tax_Id=189918 SubName: Full=ATP-dependent... 224 6e-56 tr|A1TBG6|A1TBG6_MYCVP Tax_Id=350058 SubName: Full=ATP-dependent... 222 2e-55 tr|A1TA53|A1TA53_MYCVP Tax_Id=350058 SubName: Full=ATP-dependent... 221 5e-55 tr|A3TJZ6|A3TJZ6_9MICO Tax_Id=313589 SubName: Full=Transfer prot... 218 3e-54 tr|A1RCJ2|A1RCJ2_ARTAT Tax_Id=290340 SubName: Full=Putative TraA... 216 2e-53 tr|C8XHE2|C8XHE2_NAKMY Tax_Id=479431 SubName: Full=TrwC relaxase... 209 1e-51 tr|D1BVN4|D1BVN4_9MICO Tax_Id=446471 SubName: Full=TrwC relaxase... 208 3e-51 tr|A1RCJ6|A1RCJ6_ARTAT Tax_Id=290340 SubName: Full=Toprim domain... 198 3e-48 tr|A5CLM4|A5CLM4_CLAM3 Tax_Id=443906 (traA)SubName: Full=Putativ... 196 1e-47 tr|C7Q5H7|C7Q5H7_CATAD Tax_Id=479433 SubName: Full=TrwC relaxase... 195 2e-47 tr|C3JH47|C3JH47_RHOER Tax_Id=596309 SubName: Full=DNA primase c... 193 8e-47 tr|Q9ETQ3|Q9ETQ3_COREQ Tax_Id=43767 (traA)SubName: Full=Conjugal... 192 2e-46 tr|B4F3E3|B4F3E3_COREQ Tax_Id=43767 SubName: Full=Putative conju... 192 2e-46 tr|A1SCI1|A1SCI1_NOCSJ Tax_Id=196162 SubName: Full=DNA primase c... 190 9e-46 tr|B4F382|B4F382_COREQ Tax_Id=43767 SubName: Full=Putative conju... 189 1e-45 tr|C0E195|C0E195_9CORY Tax_Id=566549 SubName: Full=Putative unch... 187 8e-45 tr|C2BM19|C2BM19_9CORY Tax_Id=525264 (traA)SubName: Full=TraA pr... 185 3e-44 tr|Q3L956|Q3L956_RHOE4 Tax_Id=234621 SubName: Full=Putative unch... 184 5e-44 tr|B3GW66|B3GW66_9CORY Tax_Id=169292 (traA)SubName: Full=TraA Pr... 183 8e-44 tr|A3FG49|A3FG49_9PSEU Tax_Id=346045 SubName: Full=ORF16;[Amycol... 183 8e-44 tr|C4DRT0|C4DRT0_9ACTO Tax_Id=446470 SubName: Full=TrwC relaxase... 180 7e-43 tr|D0YT16|D0YT16_9ACTO Tax_Id=596328 SubName: Full=DNA primase c... 180 9e-43 >tr|B2HL43|B2HL43_MYCMM Tax_Id=216594 SubName: Full=ATP-dependent exodnase (Exonuclease V);[Mycobacterium marinum] Length = 934 Score = 1652 bits (4279), Expect = 0.0 Identities = 845/934 (90%), Positives = 845/934 (90%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTRTPVWLCAGDAHTAA 60 MLTIAKLSRWSINYYNDT EYYAEHDTRTPVWLCAGDAHTAA Sbjct: 1 MLTIAKLSRWSINYYNDTARAAGAAAADAQRAGGGLGEYYAEHDTRTPVWLCAGDAHTAA 60 Query: 61 KLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGASGRAFGNRGVHGFDLTFCAPKSVSLIR 120 KLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGASGRAFGNRGVHGFDLTFCAPKSVSLIR Sbjct: 61 KLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGASGRAFGNRGVHGFDLTFCAPKSVSLIR 120 Query: 121 ALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQHE 180 ALRAGDV LEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQHE Sbjct: 121 ALRAGDVADKAIATAHATAVSEALEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQHE 180 Query: 181 TSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFE 240 TSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFE Sbjct: 181 TSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFE 240 Query: 241 WLPVDPATGMAEVAGIAPESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAAQKATR 300 WLPVDPATGMAEVAGIAPESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAAQKATR Sbjct: 241 WLPVDPATGMAEVAGIAPESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAAQKATR 300 Query: 301 PAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQIDKA 360 PAKPEQLSFAELRAAWRADERGVRLDD EGSRQPFDRRRLAAAAEQIDKA Sbjct: 301 PAKPEQLSFAELRAAWRADERGVRLDDAARRAARQARREGSRQPFDRRRLAAAAEQIDKA 360 Query: 361 GFTRADLVEIVGAQLPVDTEQSPRRLVEAAVEEIGILLTAARQPHQREGHDRFTLDRILA 420 GFTRADLVEIVGAQLPVDTEQSPRRLVEAAVEEIGILLTAARQPHQREGHDRFTLDRILA Sbjct: 361 GFTRADLVEIVGAQLPVDTEQSPRRLVEAAVEEIGILLTAARQPHQREGHDRFTLDRILA 420 Query: 421 EEAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAGKTTS 480 EEAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAGKTTS Sbjct: 421 EEAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAGKTTS 480 Query: 481 LRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGTLTLGHLDL 540 LRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGTLTLGHLDL Sbjct: 481 LRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGTLTLGHLDL 540 Query: 541 VVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQL 600 VVVDEAAMVG KTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQL Sbjct: 541 VVVDEAAMVGTDDLRRLLAATTTARTKTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQL 600 Query: 601 SEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDTA 660 SEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGD YNRDTA Sbjct: 601 SEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDAITMAADALAAYNRDTA 660 Query: 661 AGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAARGHRIAVGDLIISRRNDPTLPVF 720 AGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAARGHRIAVGDLIISRRNDPTLPVF Sbjct: 661 AGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAARGHRIAVGDLIISRRNDPTLPVF 720 Query: 721 DATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITYGYAITV 780 DATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITYGYAITV Sbjct: 721 DATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITYGYAITV 780 Query: 781 HSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGENEHRQPNGVHIPRR 840 HSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGENEHRQPNGVHIPRR Sbjct: 781 HSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGENEHRQPNGVHIPRR 840 Query: 841 GTAKEAAQRARTIIANQDEXXXXXXXXXXXXXXXXLPERVRSLLRRRSDAIRQRCTTYQQ 900 GTAKEAAQRARTIIANQDE LPERVRSLLRRRSDAIRQRCTTYQQ Sbjct: 841 GTAKEAAQRARTIIANQDEQARTADQIAQDADASALPERVRSLLRRRSDAIRQRCTTYQQ 900 Query: 901 WRNAVAGMNITDGYTLGQHIDRSRGQYVGYQAGL 934 WRNAVAGMNITDGYTLGQHIDRSRGQYVGYQAGL Sbjct: 901 WRNAVAGMNITDGYTLGQHIDRSRGQYVGYQAGL 934 >tr|Q938A0|Q938A0_MYCAV Tax_Id=1764 SubName: Full=Putative relaxase;[Mycobacterium avium] Length = 942 Score = 1154 bits (2985), Expect = 0.0 Identities = 606/943 (64%), Positives = 687/943 (72%), Gaps = 12/943 (1%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTRTPVWLCAGDAHTAA 60 MLTIAKLSRWSINYYNDT EYY EHDTRTPVW+C GDAH AA Sbjct: 1 MLTIAKLSRWSINYYNDTARAAGQAARDACSAGGGLGEYYGEHDTRTPVWVCVGDAHKAA 60 Query: 61 KLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGASGRAFGNRGVHGFDLTFCAPKSVSLIR 120 +LVGL+D +RAGG ADP VV RWLDDG AP+G GRA G VHGFDLTFCAPKSVSLIR Sbjct: 61 ELVGLSDAERAGGEADPAVVARWLDDGIAPSGGCGRALGKGAVHGFDLTFCAPKSVSLIR 120 Query: 121 ALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQHE 180 ALR DV LEYL+ HAGYTRVHNPVTGEKDL+RLPGLVAIAYQHE Sbjct: 121 ALRGDDVAEKAVLAAHATAIAEALEYLSQHAGYTRVHNPVTGEKDLVRLPGLVAIAYQHE 180 Query: 181 TSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFE 240 TSRAGDPHLHTHV+VPNRQAR DG+LVS+DGTSLYHEAKAAGVIYQATLRRELH+SLG E Sbjct: 181 TSRAGDPHLHTHVLVPNRQARGDGKLVSVDGTSLYHEAKAAGVIYQATLRRELHRSLGME 240 Query: 241 WLPVDPATGMAEVAGIAPESVTAWSQRSSQLREWAAGNLALAD-GQNLSPAQLSAAQKAT 299 W PVDP TGMAE+AGI P+S+ AWSQRSS LREWAA +L + D S QL+ AQKAT Sbjct: 241 WAPVDPHTGMAELAGIDPKSIAAWSQRSSALREWAANHLVVVDAAAGPSAGQLAPAQKAT 300 Query: 300 RPAKPEQLSFAELRAAWRADERGVRLDD---XXXXXXXXXXXEGSRQPFDRRRLAAAAEQ 356 RP KPEQL++A+L A W+AD RGVR D + PFDRRRL AAE Sbjct: 301 RPTKPEQLAWAQLAAMWQADARGVRFDREAFQEARKARRAWGAAATAPFDRRRLLGAAEA 360 Query: 357 IDKAGFTRADLVEIVGAQLPVDTEQSPRRLVEAAVEEIGILLTAARQPHQREGHDRFTLD 416 +DKA FTRADLVE++GAQLPVD E+SPR +VEAAV+ +G+ +TAAR QREGH+RFTL Sbjct: 361 MDKATFTRADLVELMGAQLPVDVERSPREMVEAAVDALGMRVTAARAAPQREGHERFTLG 420 Query: 417 RILAEEAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAG 476 L EE A+L LVDA+D+RA++WV + DT GLS DQ R V IA SPWLV PLSAPAGAG Sbjct: 421 VFLHEEQAVLDLVDAEDVRAQIWVTDEDTAGLSADQARAVCAIAGSPWLVCPLSAPAGAG 480 Query: 477 KTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGTLTLG 536 KTTSLRALA+ A RR +V V+APTG AVDVA+REGAGDVGYT+AKA+ L +GTLT+ Sbjct: 481 KTTSLRALAS-AARRFRGQVIVIAPTGKAVDVAVREGAGDVGYTVAKAVKSLREGTLTVR 539 Query: 537 HLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPW 596 +VVVDEAAMVG K VLVGDAHQLAPVKARGGMFAQLC DLPW Sbjct: 540 RPGVVVVDEAAMVGTEDLGALLAATTTAGVKCVLVGDAHQLAPVKARGGMFAQLCEDLPW 599 Query: 597 AQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYN 656 Q+LSEVWRMRDP+ER+ASLA+RDGGPAPVRRA WYR H RL TGD Y Sbjct: 600 TQKLSEVWRMRDPDERSASLAVRDGGPAPVRRAAAWYRAHGRLRTGDPIAMAADALAAYR 659 Query: 657 RDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAARGHRIAVGDLIISRRNDPT 716 DTAAG++ALLICDT EMADALNRRIH + I A P V AARGHRIA GD+IISRRNDP Sbjct: 660 ADTAAGKDALLICDTKEMADALNRRIHDESIDAQAPTVTAARGHRIAKGDVIISRRNDPA 719 Query: 717 LPVFDATDI-KKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITYG 775 +PV +ATDI ADPVRNG RWR+ AVDP +R+AARRL DGAR F+GDYL +H+T+G Sbjct: 720 IPVVEATDITTPAADPVRNGQRWRVLAVDPEKHRIAARRLDDGARTVFSGDYLHQHVTHG 779 Query: 776 YAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGENEHR---QP 832 YA+TVHSAQGVTA+TTHAVLGE TTR+LLYVA+TRGR N AYL+ER+AGE EH Q Sbjct: 780 YAVTVHSAQGVTAETTHAVLGETTTRSLLYVALTRGRHTNHAYLYERLAGETEHEHADQQ 839 Query: 833 NGVHIPRRGTAKEAAQRARTIIANQDE-XXXXXXXXXXXXXXXXLPERVRSLLRRRSDAI 891 GVH+ RRGT+ EAAQ R IIAN+DE LP+RV+ LL RR A+ Sbjct: 840 PGVHVARRGTSAEAAQLVRGIIANRDERARTAHDIAAHTQDRARLPKRVQRLLDRRDRAV 899 Query: 892 RQRCTTYQQWRNAVAGMNITDGYTLGQHIDRSRGQYVGYQAGL 934 +QR Y+ W + + L QH RSR QY +GL Sbjct: 900 QQRWAAYRNWHGQRVEQALEHQHWLDQH--RSRSQYQSLDSGL 940 >tr|A1UPD8|A1UPD8_MYCSK Tax_Id=189918 SubName: Full=ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein;[Mycobacterium sp.] Length = 946 Score = 897 bits (2318), Expect = 0.0 Identities = 472/871 (54%), Positives = 577/871 (66%), Gaps = 17/871 (1%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTRTPVWLCAGDAHTAA 60 MLTI++LSRWSI YYNDT EYY+E DTR P W+ GD T Sbjct: 1 MLTISRLSRWSIGYYNDTANQARQASMDRQAAGGGLGEYYSEGDTRVPTWVVVGDKATVG 60 Query: 61 KLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGASGRAFGNRGVHGFDLTFCAPKSVSLIR 120 + GL GG AD EV RWLDDG PNG +GRAFG GVHGFDL F APKSVSL+R Sbjct: 61 EATGLDGAALDGGFADTEVAARWLDDGVTPNGEAGRAFGTNGVHGFDLMFAAPKSVSLLR 120 Query: 121 ALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQHE 180 +L DV + YL HAGYTRVHNP+T KDL RLPGLVAIAYQHE Sbjct: 121 SL-TDDVAEKVMQNAHVKAVEAAMTYLHEHAGYTRVHNPLTSNKDLQRLPGLVAIAYQHE 179 Query: 181 TSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFE 240 TSR GDPHLHTHVIVPNRQ RADG+LVSID SLYHEAKAAG+IYQATLR ELH GFE Sbjct: 180 TSRCGDPHLHTHVIVPNRQVRADGRLVSIDSKSLYHEAKAAGIIYQATLRHELHAERGFE 239 Query: 241 WLPVDPATGMAEVAGIAPESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAAQKATR 300 W PVD +GMAE+AG+ S+ AWSQRS++LREWA NL + DG+ + AQL+ AQKATR Sbjct: 240 WQPVDEHSGMAEIAGVTAASIKAWSQRSTRLREWAKDNLVVVDGEP-TAAQLATAQKATR 298 Query: 301 PAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQIDKA 360 P KPEQL++ EL+A WRAD RG+ LD +R P DR R+A A +IDKA Sbjct: 299 PTKPEQLAWDELKAMWRADARGLDLDRDAHFAAREARRAQARSPLDRARIAHMAARIDKA 358 Query: 361 GFTRADLVEIVGAQLPVDTEQSPRRLVEAAVEEIGILLTAARQPHQREGHDRFTLDRILA 420 FTRAD+VEIVGAQLPV PR L+EA V+++G+ ++A R+ H REGH+++T+D I+ Sbjct: 359 AFTRADMVEIVGAQLPVGAVGEPRALIEAFVDDVGVRISAPREAHHREGHEKYTVDAIML 418 Query: 421 EEAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAGKTTS 480 EE+ +L +VD D R+ L V+ D LS DQ+R + NIA SP+LVQPL APAGAGKT S Sbjct: 419 EESRILDMVDTSDNRSRLDVRAADLGDLSADQERAIRNIAVSPFLVQPLQAPAGAGKTHS 478 Query: 481 LRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGTLTLGHLDL 540 L+AL A R + V VLAPTG AVD A++E AGD G T+AKAL ++ L + + Sbjct: 479 LKALRAAAHRAN-KEVLVLAPTGKAVDEAMQEEAGDRGLTVAKALKLIEDNNLAIDRRTV 537 Query: 541 VVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQL 600 VVVDEA+MVG K VLVGD +QLAPVKARGGMF LC DLPW+Q+L Sbjct: 538 VVVDEASMVGTPELKKLLSAAVAGRAKMVLVGDPYQLAPVKARGGMFEHLCGDLPWSQRL 597 Query: 601 SEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDTA 660 EVWRMR EER ASLALR G +R+AV WYR+H RLHTGD Y D A Sbjct: 598 GEVWRMRSAEERDASLALRSGHGNRLRKAVGWYRSHGRLHTGDPIAMAKDAGDAYLADRA 657 Query: 661 AGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAARGHRIAVGDLIISRRNDPTLPVF 720 AG+++L++CD+ EMADALN+R+H ++ D P+V AAR RIAVGD+IISR ND ++PV Sbjct: 658 AGKDSLMVCDSWEMADALNQRVHNALV-GDGPSVRAARDQRIAVGDIIISRENDISIPVH 716 Query: 721 DATD--IKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITYGYAI 778 + + + D VRNGNRWR+ +D NRVAA RL D AR F GDYLR+++T GYA+ Sbjct: 717 PGAEHPVGQAVDQVRNGNRWRVAGIDEKTNRVAAERLTDKARVVFDGDYLRQNVTLGYAV 776 Query: 779 TVHSAQGVTA------DTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGENEHRQP 832 TVHSAQGVT H++L + ++RA+ YV MTR + N AY+++RI+GE +H Sbjct: 777 TVHSAQGVTVGNKTTPGVCHSILADTSSRAMAYVGMTRAKDENHAYVYQRISGEADHEHS 836 Query: 833 N-----GVHIPRRGTAKEAAQRARTIIANQD 858 +H+ RRG AA RTI+AN D Sbjct: 837 RLVAGADIHVLRRGNKWAAAHHFRTILANDD 867 >tr|A4TGK3|A4TGK3_MYCGI Tax_Id=350054 SubName: Full=ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein;[Mycobacterium gilvum] Length = 945 Score = 891 bits (2302), Expect = 0.0 Identities = 476/867 (54%), Positives = 569/867 (65%), Gaps = 14/867 (1%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTRTPVWLCAGDAHTAA 60 MLTI++LSRWSI YYNDT EYY+E DTR P W+ GD T Sbjct: 1 MLTISRLSRWSIGYYNDTANQARQASMDRQAAGGGLGEYYSEGDTRVPTWVVVGDKATVG 60 Query: 61 KLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGASGRAFGNRGVHGFDLTFCAPKSVSLIR 120 + GL GG AD EV RWLDDG PNG +GRAFG GVHGFDL F APKSVSL+R Sbjct: 61 EATGLDGAALDGGFADTEVAARWLDDGVTPNGEAGRAFGTNGVHGFDLMFAAPKSVSLLR 120 Query: 121 ALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQHE 180 +L DV + YL HAGYTRVHNP+T KDL RLPGLVAIAYQHE Sbjct: 121 SL-TDDVAEKVMQNAHVKAVEAAMTYLHEHAGYTRVHNPLTSNKDLQRLPGLVAIAYQHE 179 Query: 181 TSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFE 240 TSR GDPHLHTHVIVPNRQARADG+LVSID SLYHEAKAAG+IYQATLR ELH GFE Sbjct: 180 TSRCGDPHLHTHVIVPNRQARADGRLVSIDSKSLYHEAKAAGIIYQATLRHELHAERGFE 239 Query: 241 WLPVDPATGMAEVAGIAPESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAAQKATR 300 W VD +GMAE+AG+ S+ AWSQRS++LREWA NL + DG+ + AQL+ AQKATR Sbjct: 240 WQRVDEHSGMAEIAGVTAASIKAWSQRSTRLREWAKDNLVVVDGEP-TAAQLATAQKATR 298 Query: 301 PAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQIDKA 360 P+KPEQL++ EL+ WRAD RG+ LD + P R R++AA IDKA Sbjct: 299 PSKPEQLAWDELKTMWRADARGLDLDRDAHFAARAERRAQAHIP-GRARISAALAHIDKA 357 Query: 361 GFTRADLVEIVGAQLPVDTEQSPRRLVEAAVEE----IGILLTAARQPHQREGHDRFTLD 416 FTRAD+VE+VGA +P D + R V A +E+ IG+ ++A R H+REGH+++TL Sbjct: 358 AFTRADVVELVGAVMPYDEDPGEGRDVRARIEDLAARIGLRVSAPRAAHEREGHEKYTLT 417 Query: 417 RILAEEAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAG 476 IL EE +L+ A D RA L V+ + LSPDQ R V I S WLV PLSAPAGAG Sbjct: 418 AILNEEMRVLEAAGATDARARLGVRSSELAALSPDQARAVTAIGMSQWLVNPLSAPAGAG 477 Query: 477 KTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGTLTLG 536 KT SL+AL A R H V VLAPTGTAVD A+ +GAGD G T+ KALH+LD GTL L Sbjct: 478 KTHSLQALRAAAHRVH-KEVLVLAPTGTAVDQALADGAGDHGMTLDKALHQLDTGTLALD 536 Query: 537 HLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPW 596 +VVVDEA+MV KTVLVGD +QLAPVKARGGMF QLC +LPW Sbjct: 537 QRTVVVVDEASMVATPKLRQLLETTTAAQAKTVLVGDPYQLAPVKARGGMFDQLCIELPW 596 Query: 597 AQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYN 656 Q+LS+VWRM DP ER ASLA+R+G +RRAV WYR+HDRLHTGD Y Sbjct: 597 TQRLSQVWRMHDPAERDASLAIRNGRGNRLRRAVGWYRSHDRLHTGDQVSMAADALTAYL 656 Query: 657 RDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAARGHRIAVGDLIISRRNDPT 716 D AAG+N LL+CDT ++ADALN+R+H D + + P AR + VGD+I+SR NDPT Sbjct: 657 DDRAAGKNTLLVCDTWDIADALNQRLH-DTLTTEGPTAQVARDQTVRVGDIIVSRDNDPT 715 Query: 717 LPVFDATDIKKG--ADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITY 774 + V ++G D VRNGNRWR+ +D NRVAA RL D AR F GDYLR+H+ Sbjct: 716 ITVHPGPHHREGQTVDQVRNGNRWRVAGIDEKTNRVAAERLTDKARVLFEGDYLRQHVHL 775 Query: 775 GYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGE--NEHRQP 832 GYA+TVH+AQGVT DT H VLGEN +R YV ++RGR N AYL+ R +GE +EH P Sbjct: 776 GYAVTVHAAQGVTVDTAHTVLGENASRTQAYVGLSRGRQTNHAYLYTRFSGEADHEHSAP 835 Query: 833 N-GVHIPRRGTAKEAAQRARTIIANQD 858 + G+H+ RRGT AA + I+AN D Sbjct: 836 HTGMHVARRGTKHTAAHALQMILANDD 862 >tr|A4TGJ8|A4TGJ8_MYCGI Tax_Id=350054 SubName: Full=ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein;[Mycobacterium gilvum] Length = 944 Score = 887 bits (2293), Expect = 0.0 Identities = 476/867 (54%), Positives = 565/867 (65%), Gaps = 14/867 (1%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTRTPVWLCAGDAHTAA 60 MLTI++LSRWSI YYNDT EYY+E DTR P W+ GD T Sbjct: 1 MLTISRLSRWSIGYYNDTANQARQASMDRQAAGGGLGEYYSEGDTRVPTWVVVGDKATVG 60 Query: 61 KLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGASGRAFGNRGVHGFDLTFCAPKSVSLIR 120 + GL GG AD EV RWLDDG P+G +GRAFG GVHGFDL F APKSVSL+R Sbjct: 61 EATGLDGAALDGGFADTEVAARWLDDGVTPSGEAGRAFGTNGVHGFDLMFAAPKSVSLLR 120 Query: 121 ALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQHE 180 +L DV + YL HAGYTRVHN VTG KDL RLPGLVAIAYQHE Sbjct: 121 SL-TDDVAEKVMQNAHVTAVEAAMTYLHEHAGYTRVHNRVTGMKDLQRLPGLVAIAYQHE 179 Query: 181 TSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFE 240 TSR GDPHLHTHVIVPNRQARADG+LVSID SLYHEAKAAG+IYQATLR EL+ GFE Sbjct: 180 TSRCGDPHLHTHVIVPNRQARADGRLVSIDSKSLYHEAKAAGIIYQATLRHELYAERGFE 239 Query: 241 WLPVDPATGMAEVAGIAPESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAAQKATR 300 W PVD +GMAE+AG+ S+ AWSQRS++LREWA NL + DG+ + AQL+ AQKATR Sbjct: 240 WAPVDEHSGMAEIAGVTKRSIKAWSQRSTRLREWAKDNLVVVDGEP-TAAQLATAQKATR 298 Query: 301 PAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQIDKA 360 P+KPEQL++ EL+A WRAD RG+ L D R R+A A IDKA Sbjct: 299 PSKPEQLAWDELKAMWRADARGLDL-DRDAHFAAREARRAQAHISGRARIAGALAHIDKA 357 Query: 361 GFTRADLVEIVGAQLPVDTEQSPRRLVEAAVEE----IGILLTAARQPHQREGHDRFTLD 416 FTRAD+VE++GA +P D R V A +E+ +G+ ++A R H+REGH+++TL Sbjct: 358 AFTRADVVELIGAVMPYDESPGEGRDVRARIEDLAARVGLRVSAPRAAHEREGHEKYTLA 417 Query: 417 RILAEEAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAG 476 IL EE +L A D RA L V+ D LSPDQ R V I SPWLV PLSAPAGAG Sbjct: 418 AILKEEMRVLDAAGATDARARLDVRSSDLTALSPDQARAVSAIGMSPWLVNPLSAPAGAG 477 Query: 477 KTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGTLTLG 536 KT SL+AL A R H V VLAPTGTAVD A+ +GAGD G T+ KALH+LD G L L Sbjct: 478 KTHSLQALRAAAHRVH-KEVLVLAPTGTAVDQALADGAGDHGMTLDKALHQLDSGALQLD 536 Query: 537 HLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPW 596 +VVVDEA+MV K VLVGD +QLAPVKARGGMF QLC +LPW Sbjct: 537 QRTVVVVDEASMVATPKLRQLLETTTAARAKAVLVGDPYQLAPVKARGGMFDQLCTELPW 596 Query: 597 AQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYN 656 AQ+LS+VWRMRDP ER ASLA+R+G +RRAV WYR HDRLHTGD Y Sbjct: 597 AQRLSQVWRMRDPAERDASLAIRNGRGNRLRRAVGWYRNHDRLHTGDQVSMAAAALRAYL 656 Query: 657 RDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAARGHRIAVGDLIISRRNDPT 716 D AAG++ LL+CDT ++ADALN+R+H D + + PA AR + VGD+I+SR NDPT Sbjct: 657 DDRAAGKSTLLVCDTWDIADALNQRLH-DTLTTEGPAAQVARDQTVRVGDIIVSRDNDPT 715 Query: 717 LPVFDATDIKKG--ADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITY 774 + V +G D VRNGNRWR+ VD NRVAA RL D AR F GDYLR+H+ Sbjct: 716 ITVHRGPHHAEGQAVDQVRNGNRWRVAGVDETTNRVAAERLTDKARVLFDGDYLRQHVHL 775 Query: 775 GYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGE--NEHRQP 832 GYA+TVH+AQGVT DT H VLGE +R YV ++RGR N AYL+ R GE +EH P Sbjct: 776 GYAVTVHAAQGVTVDTAHTVLGETASRTQAYVGLSRGRQTNHAYLYTRFGGEADHEHSAP 835 Query: 833 N-GVHIPRRGTAKEAAQRARTIIANQD 858 + G+H+ RRGT AAQ + I+ N+D Sbjct: 836 HIGMHVARRGTKHAAAQALQMILTNED 862 >tr|B2I411|B2I411_MYCMM Tax_Id=216594 SubName: Full=ATP-dependent exodnase (Exonuclease V);[Mycobacterium marinum] Length = 1110 Score = 828 bits (2140), Expect = 0.0 Identities = 469/878 (53%), Positives = 563/878 (64%), Gaps = 42/878 (4%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTRTPVWLCAGDAHTAA 60 MLTIAKL WS+ YY DT EYY+E +TR PVW AG TAA Sbjct: 1 MLTIAKLGAWSVAYYVDTARSAAAAALESRAAGGGLGEYYSESETRLPVWFSAGRDTTAA 60 Query: 61 KLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGASGRAFGNR-GVHGFDLTFCAPKSVSLI 119 + GLT RAG AD + V RWLDDG +P GASGRAF R GVHG+DLTFCAPKSVSL+ Sbjct: 61 R--GLTGAGRAGENADLDAVTRWLDDGESPCGASGRAFQKRAGVHGYDLTFCAPKSVSLM 118 Query: 120 RALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQH 179 R L DV +EYLA H GYTRVHNP TGEKDL+RLPG+VA +QH Sbjct: 119 RGL-GNDVTVKAVADAHAFAITEAMEYLAEHGGYTRVHNPRTGEKDLVRLPGIVAAGFQH 177 Query: 180 ETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGF 239 ETSRAGDPHLHTHV+VPNRQARADG+LVS+DGTSLYHEAKAAG+IYQATLRREL +S+G Sbjct: 178 ETSRAGDPHLHTHVLVPNRQARADGRLVSLDGTSLYHEAKAAGIIYQATLRRELTRSIGV 237 Query: 240 EWLPVDPATGMAEVAGIAPESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAAQKAT 299 EW VDP TGMA++AG + +WS RS+QLREWA+G+L + + LS AQL+ AQKAT Sbjct: 238 EWNDVDPHTGMADIAGADRGDLRSWSTRSTQLREWASGHLRV-ECDELSAAQLATAQKAT 296 Query: 300 RPAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLA-------- 351 RP KPE +++A LR AW D R R+D+ + D RR A Sbjct: 297 RPRKPEGVAWASLRVAWADDTRTFRVDETV-----------QQAARDARRAAGVDYAEVV 345 Query: 352 --AAAEQIDKAGFTRADLVEIVGAQLPVDTEQ--SPRRLVEAAVEEIGILLTAARQPHQR 407 A + + KA FTRADL+E +GA++PVD SPR ++E + + + + R HQR Sbjct: 346 RRAVSHGLRKAAFTRADLIEAIGARMPVDDADGPSPREVIERLADGVALRIGDERAAHQR 405 Query: 408 EGHDRFTLDRILAEEAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQ 467 EG R+T ++AEE A+++++ + A L DT GLSPDQ R V IATS LVQ Sbjct: 406 EGSIRYTAADLVAEERAIIEVMGRRHSAAVL--PSVDTAGLSPDQARAVTAIATSERLVQ 463 Query: 468 PLSAPAGAGKTTSLRALATMARRRHTA--RVFVLAPTGTAVDVAIREGAGDVGYTIAKAL 525 PLSAPAGAGKT SLRAL A H A RV V APTG AVDVA+RE AGD G T+ L Sbjct: 464 PLSAPAGAGKTHSLRALRAAA---HDAGKRVLVAAPTGRAVDVAVREQAGDHGATLDALL 520 Query: 526 HELDKGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGG 585 L++G L +VVVDEA MVG K VLVGD HQLAPV RGG Sbjct: 521 GRLERGQEVLDADTVVVVDEAGMVGTQHLRRLLERATAAGTKVVLVGDEHQLAPVAQRGG 580 Query: 586 MFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXX 645 FAQL DLPWAQ+LS+VWRM D +ER ASLA+RDGGPA +RRAV WYR HDRLH GD Sbjct: 581 TFAQLVTDLPWAQRLSQVWRMHDHDERNASLAVRDGGPAALRRAVGWYRRHDRLHIGDQV 640 Query: 646 XXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAARGHRIAVG 705 + D AAGR+ LLI D EMADALN RIH + I+ D P V AARGHR+A G Sbjct: 641 TMADDAVAAWTADVAAGRDGLLIADRWEMADALNIRIHSERISDDAPTVAAARGHRVAAG 700 Query: 706 DLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTG 765 D++I+R+N +P TD ADP+RNG RW + AVDP R+AARRL D A A +G Sbjct: 701 DVVITRQNTTDIPT--RTDRGADADPIRNGQRWEVLAVDPDAGRIAARRLDDRAVAVLSG 758 Query: 766 DYLREHITYGYAITVHSAQGVTADTTHAVL-GENTTRALLYVAMTRGRSANTAYLHERIA 824 DYLR++ GYA+TVH+AQGVTADT H +L E TR++ YV +TRGR NT L++ A Sbjct: 759 DYLRQYTHLGYAVTVHAAQGVTADTCHTLLSAEAATRSIAYVGLTRGRHTNTVRLYDTRA 818 Query: 825 GE--NEHRQP--NGVHIPRRGTAKEAAQRARTIIANQD 858 GE +EH P GVH RRGT +AA R+++ D Sbjct: 819 GEADHEHADPIATGVHTARRGTPAQAATALRSVLGRDD 856 >tr|B1MAE8|B1MAE8_MYCA9 Tax_Id=561007 SubName: Full=TraA/ATP-dependent exoDNAse/relaxase;[Mycobacterium abscessus] Length = 1110 Score = 828 bits (2140), Expect = 0.0 Identities = 469/878 (53%), Positives = 563/878 (64%), Gaps = 42/878 (4%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTRTPVWLCAGDAHTAA 60 MLTIAKL WS+ YY DT EYY+E +TR PVW AG TAA Sbjct: 1 MLTIAKLGAWSVAYYVDTARSAAAAALESRAAGGGLGEYYSESETRLPVWFSAGRDTTAA 60 Query: 61 KLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGASGRAFGNR-GVHGFDLTFCAPKSVSLI 119 + GLT RAG AD + V RWLDDG +P GASGRAF R GVHG+DLTFCAPKSVSL+ Sbjct: 61 R--GLTGAGRAGENADLDAVTRWLDDGESPCGASGRAFQKRAGVHGYDLTFCAPKSVSLM 118 Query: 120 RALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQH 179 R L DV +EYLA H GYTRVHNP TGEKDL+RLPG+VA +QH Sbjct: 119 RGL-GNDVTVKAVADAHAFAITEAMEYLAEHGGYTRVHNPRTGEKDLVRLPGIVAAGFQH 177 Query: 180 ETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGF 239 ETSRAGDPHLHTHV+VPNRQARADG+LVS+DGTSLYHEAKAAG+IYQATLRREL +S+G Sbjct: 178 ETSRAGDPHLHTHVLVPNRQARADGRLVSLDGTSLYHEAKAAGIIYQATLRRELTRSIGV 237 Query: 240 EWLPVDPATGMAEVAGIAPESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAAQKAT 299 EW VDP TGMA++AG + +WS RS+QLREWA+G+L + + LS AQL+ AQKAT Sbjct: 238 EWNDVDPHTGMADIAGADRGDLRSWSTRSTQLREWASGHLRV-ECDELSAAQLATAQKAT 296 Query: 300 RPAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLA-------- 351 RP KPE +++A LR AW D R R+D+ + D RR A Sbjct: 297 RPRKPEGVAWASLRVAWADDTRTFRVDETV-----------QQAARDARRAAGVDYAEVV 345 Query: 352 --AAAEQIDKAGFTRADLVEIVGAQLPVDTEQ--SPRRLVEAAVEEIGILLTAARQPHQR 407 A + + KA FTRADL+E +GA++PVD SPR ++E + + + + R HQR Sbjct: 346 RRAVSHGLRKAAFTRADLIEAIGARMPVDDADGPSPREVIERLADGVALRIGDERAAHQR 405 Query: 408 EGHDRFTLDRILAEEAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQ 467 EG R+T ++AEE A+++++ + A L DT GLSPDQ R V IATS LVQ Sbjct: 406 EGSIRYTAADLVAEERAIIEVMGRRHSAAVL--PSVDTAGLSPDQARAVTAIATSERLVQ 463 Query: 468 PLSAPAGAGKTTSLRALATMARRRHTA--RVFVLAPTGTAVDVAIREGAGDVGYTIAKAL 525 PLSAPAGAGKT SLRAL A H A RV V APTG AVDVA+RE AGD G T+ L Sbjct: 464 PLSAPAGAGKTHSLRALRAAA---HDAGKRVLVAAPTGRAVDVAVREQAGDHGATLDALL 520 Query: 526 HELDKGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGG 585 L++G L +VVVDEA MVG K VLVGD HQLAPV RGG Sbjct: 521 GRLERGQEVLDADTVVVVDEAGMVGTQHLRRLLERATAAGTKVVLVGDEHQLAPVAQRGG 580 Query: 586 MFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXX 645 FAQL DLPWAQ+LS+VWRM D +ER ASLA+RDGGPA +RRAV WYR HDRLH GD Sbjct: 581 TFAQLVTDLPWAQRLSQVWRMHDHDERNASLAVRDGGPAALRRAVGWYRRHDRLHIGDQV 640 Query: 646 XXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAARGHRIAVG 705 + D AAGR+ LLI D EMADALN RIH + I+ D P V AARGHR+A G Sbjct: 641 TMADDAVAAWTADVAAGRDGLLIADRWEMADALNIRIHSERISDDAPTVAAARGHRVAAG 700 Query: 706 DLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTG 765 D++I+R+N +P TD ADP+RNG RW + AVDP R+AARRL D A A +G Sbjct: 701 DVVITRQNTTDIPT--RTDRGADADPIRNGQRWEVLAVDPDAGRIAARRLDDRAVAVLSG 758 Query: 766 DYLREHITYGYAITVHSAQGVTADTTHAVL-GENTTRALLYVAMTRGRSANTAYLHERIA 824 DYLR++ GYA+TVH+AQGVTADT H +L E TR++ YV +TRGR NT L++ A Sbjct: 759 DYLRQYTHLGYAVTVHAAQGVTADTCHTLLSAEAATRSIAYVGLTRGRHTNTVRLYDTRA 818 Query: 825 GE--NEHRQP--NGVHIPRRGTAKEAAQRARTIIANQD 858 GE +EH P GVH RRGT +AA R+++ D Sbjct: 819 GEADHEHADPIATGVHTARRGTPAQAATALRSVLGRDD 856 >tr|Q8FLJ3|Q8FLJ3_COREF Tax_Id=152794 SubName: Full=Putative conjugal transfer protein traA;[Corynebacterium efficiens] Length = 1154 Score = 402 bits (1032), Expect = e-109 Identities = 309/886 (34%), Positives = 422/886 (47%), Gaps = 75/886 (8%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTR-TPVWLCAGDAHTA 59 +LTIAKL S++YY+ T YY+E + VW + Sbjct: 34 VLTIAKLGAHSVSYYDSTVAEGIGPD-----------NYYSEAGSAPAQVWSRSDRVAEC 82 Query: 60 AKLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGAS-GRAFGNRGVHGFDLTFCAPKSVSL 118 A +G+ G D + V++W + TAP+G G+ GV G+DLTF APKSVS+ Sbjct: 83 AAFLGVEQ----GQSLDGDQVKKWFNHTTAPSGNRLGQVMREDGVRGYDLTFSAPKSVSV 138 Query: 119 IRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLL--RLPGLVAIA 176 + L D L+YL HA YTR + K L+ + GL + Sbjct: 139 LWGLSGRDEVRQVVDEAHAMAVARALDYLETHASYTRRRDE---NKTLIVDKTVGLSGVK 195 Query: 177 YQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQS 236 Y+H TSRAGDPH+H+HV++ NRQ DGQ+ S+DG SLYHEA+AAG++YQA LR EL + Sbjct: 196 YEHRTSRAGDPHVHSHVLLANRQLCPDGQVRSVDGKSLYHEARAAGMLYQAVLREELTRQ 255 Query: 237 LGFEWLPVDPATGMAEVAGI-APESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAA 295 LG EW V G A++ G+ P +TA+S R++++ +W A N AL L A Sbjct: 256 LGVEWGEV--TKGQADIKGLNDPAVLTAFSTRTTEIGQWEAEN-ALTTNYQLQ----RVA 308 Query: 296 QKATRPAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAE 355 QK TR K ++L W ++ E P L Sbjct: 309 QKKTRQTKNVDAVLSDLETQWAQQRAAQQVAQFAAGLGAGATEEKKNLPTPEAVLTEVI- 367 Query: 356 QIDKAGFTRADLVEIVGAQLPVDTEQSPRRL---VEA----AVEEIGILLTAARQPH--- 405 +++ FTRAD+VE +PV T SP + VEA A+E + + +T R Sbjct: 368 -AERSTFTRADVVEKCAEMIPVGT-LSPDEILGFVEATATHALESVALSVTPDRAREVDN 425 Query: 406 -QREGHDRFTLDRILAEEAALLQLVDAQDIRAELWVKERDTEG-LSPDQKRVVENIATSP 463 QREG RFT D ++ E + L + A EG LSP Q + + +S Sbjct: 426 TQREGSQRFTTDAVIQEVNKGIDLATTKTHNAVSADSIVPVEGTLSPAQAEAMAAVVSSD 485 Query: 464 WLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAK 523 +L + APAGAGKT+SL+A A A V LAPTG A DV + E TIA+ Sbjct: 486 FLASVVVAPAGAGKTSSLKA-ARQAWEHAGKTVIGLAPTGKAADVMVGEHVAHESSTIAR 544 Query: 524 ALHELD-------KGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQ 576 AL+ + L +VVVDEA MV K VLVGD HQ Sbjct: 545 ALYGTEDLAPAQVAARLGWNRDTVVVVDEAGMVATPDVVRLLEITRAAQAKIVLVGDPHQ 604 Query: 577 LAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTH 636 A VKAR GM A L +LP A +L+EV+R RD ER AS+ LR G ++RA WY Sbjct: 605 YAAVKARSGMLATLAYELPDAVELTEVFRQRDVAEREASIQLRSGDKDSIKRAAHWYMLQ 664 Query: 637 DRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIA 696 RL G + DTAAG+++LL+ T E ALN + I AD+ + Sbjct: 665 GRLEAGSTTAMLDDALAGWTSDTAAGKDSLLVAATGEQVQALNAGAQK--IRADRGELYL 722 Query: 697 AR------GHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRV 750 + G + GD++++R+ND L + D VRNG RWR+ + G+ + Sbjct: 723 SEARELSTGQWLHAGDVLLTRKNDYDL-------LTSAGDVVRNGQRWRVDQLH-GDGSI 774 Query: 751 AARRLHD-GARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGE-NTTRALLYVAM 808 +A RL D A A YL+E GYA T HSAQG T D V G RA +YV + Sbjct: 775 SATRLDDTQATATIPASYLKESGQLGYASTGHSAQGATVDVARVVAGAGQVDRASVYVPL 834 Query: 809 TRGRSANTAYLHERIAGENEHRQPNGVHIPRRGTAKEAAQRARTII 854 TRGR N YL E + G+ + GV +R +E A+ AR ++ Sbjct: 835 TRGREGNYLYLTESMPGDTDTGH-GGVTPTKR---REGAEYARDLL 876 >tr|C8NSP3|C8NSP3_COREF Tax_Id=196164 SubName: Full=Putative uncharacterized protein;[Corynebacterium efficiens YS-314] Length = 1135 Score = 402 bits (1032), Expect = e-109 Identities = 309/886 (34%), Positives = 422/886 (47%), Gaps = 75/886 (8%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTR-TPVWLCAGDAHTA 59 +LTIAKL S++YY+ T YY+E + VW + Sbjct: 15 VLTIAKLGAHSVSYYDSTVAEGIGPD-----------NYYSEAGSAPAQVWSRSDRVAEC 63 Query: 60 AKLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGAS-GRAFGNRGVHGFDLTFCAPKSVSL 118 A +G+ G D + V++W + TAP+G G+ GV G+DLTF APKSVS+ Sbjct: 64 AAFLGVEQ----GQSLDGDQVKKWFNHTTAPSGNRLGQVMREDGVRGYDLTFSAPKSVSV 119 Query: 119 IRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLL--RLPGLVAIA 176 + L D L+YL HA YTR + K L+ + GL + Sbjct: 120 LWGLSGRDEVRQVVDEAHAMAVARALDYLETHASYTRRRDE---NKTLIVDKTVGLSGVK 176 Query: 177 YQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQS 236 Y+H TSRAGDPH+H+HV++ NRQ DGQ+ S+DG SLYHEA+AAG++YQA LR EL + Sbjct: 177 YEHRTSRAGDPHVHSHVLLANRQLCPDGQVRSVDGKSLYHEARAAGMLYQAVLREELTRQ 236 Query: 237 LGFEWLPVDPATGMAEVAGI-APESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAA 295 LG EW V G A++ G+ P +TA+S R++++ +W A N AL L A Sbjct: 237 LGVEWGEV--TKGQADIKGLNDPAVLTAFSTRTTEIGQWEAEN-ALTTNYQLQ----RVA 289 Query: 296 QKATRPAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAE 355 QK TR K ++L W ++ E P L Sbjct: 290 QKKTRQTKNVDAVLSDLETQWAQQRAAQQVAQFAAGLGAGATEEKKNLPTPEAVLTEVI- 348 Query: 356 QIDKAGFTRADLVEIVGAQLPVDTEQSPRRL---VEA----AVEEIGILLTAARQPH--- 405 +++ FTRAD+VE +PV T SP + VEA A+E + + +T R Sbjct: 349 -AERSTFTRADVVEKCAEMIPVGT-LSPDEILGFVEATATHALESVALSVTPDRAREVDN 406 Query: 406 -QREGHDRFTLDRILAEEAALLQLVDAQDIRAELWVKERDTEG-LSPDQKRVVENIATSP 463 QREG RFT D ++ E + L + A EG LSP Q + + +S Sbjct: 407 TQREGSQRFTTDAVIQEVNKGIDLATTKTHNAVSADSIVPVEGTLSPAQAEAMAAVVSSD 466 Query: 464 WLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAK 523 +L + APAGAGKT+SL+A A A V LAPTG A DV + E TIA+ Sbjct: 467 FLASVVVAPAGAGKTSSLKA-ARQAWEHAGKTVIGLAPTGKAADVMVGEHVAHESSTIAR 525 Query: 524 ALHELD-------KGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQ 576 AL+ + L +VVVDEA MV K VLVGD HQ Sbjct: 526 ALYGTEDLAPAQVAARLGWNRDTVVVVDEAGMVATPDVVRLLEITRAAQAKIVLVGDPHQ 585 Query: 577 LAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTH 636 A VKAR GM A L +LP A +L+EV+R RD ER AS+ LR G ++RA WY Sbjct: 586 YAAVKARSGMLATLAYELPDAVELTEVFRQRDVAEREASIQLRSGDKDSIKRAAHWYMLQ 645 Query: 637 DRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIA 696 RL G + DTAAG+++LL+ T E ALN + I AD+ + Sbjct: 646 GRLEAGSTTAMLDDALAGWTSDTAAGKDSLLVAATGEQVQALNAGAQK--IRADRGELYL 703 Query: 697 AR------GHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRV 750 + G + GD++++R+ND L + D VRNG RWR+ + G+ + Sbjct: 704 SEARELSTGQWLHAGDVLLTRKNDYDL-------LTSAGDVVRNGQRWRVDQLH-GDGSI 755 Query: 751 AARRLHD-GARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGE-NTTRALLYVAM 808 +A RL D A A YL+E GYA T HSAQG T D V G RA +YV + Sbjct: 756 SATRLDDTQATATIPASYLKESGQLGYASTGHSAQGATVDVARVVAGAGQVDRASVYVPL 815 Query: 809 TRGRSANTAYLHERIAGENEHRQPNGVHIPRRGTAKEAAQRARTII 854 TRGR N YL E + G+ + GV +R +E A+ AR ++ Sbjct: 816 TRGREGNYLYLTESMPGDTDTGH-GGVTPTKR---REGAEYARDLL 857 >tr|Q8VVJ4|Q8VVJ4_CORGL Tax_Id=1718 (traA)SubName: Full=TraA protein;[Corynebacterium glutamicum] Length = 1164 Score = 400 bits (1028), Expect = e-109 Identities = 310/888 (34%), Positives = 420/888 (47%), Gaps = 68/888 (7%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTR-TPVWLCA---GDA 56 MLTIAK+ S+ YY T +YY+E T+ W+ A A Sbjct: 1 MLTIAKMHGESVAYYESTVTTFDDKISSPD-------DYYSEDGTQPATAWIQARTEAQA 53 Query: 57 HTAAKLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGAS-GRAFGNRGVHGFDLTFCAPKS 115 T A +G+ + G D V +W + AP+G GRA N GV GFDLTFCAPKS Sbjct: 54 TTVATALGVKN----GAQVDGADVGQWFNHALAPSGHKLGRAPKNSGVPGFDLTFCAPKS 109 Query: 116 VSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLL-RLPGLVA 174 VSLI L L YL+ HAGYTR + ++ R+ L Sbjct: 110 VSLIWGLTDDTDVRSTVDLAHHRAVTTALSYLSEHAGYTRRADDHDRSAMIIDRVEALSG 169 Query: 175 IAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELH 234 + Y+H TSRAGDPHLH HV++ N+Q DG+ ++DG SLYHEA+AAG IYQA LR EL Sbjct: 170 VRYEHRTSRAGDPHLHAHVLLANKQLCRDGKWRTLDGVSLYHEARAAGTIYQAVLREELS 229 Query: 235 QSLGFEWLPVDPATGMAEVAGIAPES-VTAWSQRSSQLREWAAGNLALADGQNLSPAQLS 293 ++LG +W D G AE+ G+ + +S R+ ++ +WAA N G A Sbjct: 230 RTLGVQW--ADTVHGCAEIIGLDDRGLIEDFSTRAREIDQWAADN-----GVGSDAAFER 282 Query: 294 AAQKATRPAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAA 353 QK TR K +EL W+A V S QP + Sbjct: 283 MGQKKTRQVKDLDTPLSELEQNWKA---RVSETSAPQFVEALSPHSHSPQPVALPTVDEV 339 Query: 354 AEQI--DKAGFTRADLVEIVGAQLP---VDTEQSPRRLVEAAVEEIGILLTAARQPHQ-- 406 E + +++ FTRAD+VE LP V EQ + A + G + P + Sbjct: 340 LEAVTRERSTFTRADVVEAATELLPVGAVTAEQIYDTVEHLADQVCGGQVAWTVTPEKDR 399 Query: 407 ------REGHDRFTLDRILAEEAALLQLVDAQDIRAELWVKERDTEG-LSPDQKRVVENI 459 REG RFT + ++ E + L R + EG LS Q + + Sbjct: 400 QVDRSAREGSQRFTSEAVVEEVNRGIDLATTVTGRGVSPSMIKPVEGQLSDAQAEAMRAV 459 Query: 460 ATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGY 519 +S +L + APAGAGKT+SL+A A A + +V LAPTG A DV + E Sbjct: 460 VSSRYLASVVIAPAGAGKTSSLKA-ARAAWEQAGKQVIGLAPTGKAADVMVGENVAHSSS 518 Query: 520 TIAKAL-----HELDKGTLTLGHL--DLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVG 572 T+A+ L ++++ TLG ++VVDEA MV + VLVG Sbjct: 519 TLARVLRGVEDQDVEQAVATLGWSTDHVIVVDEAGMVSTPEMVRVLELAHAADARVVLVG 578 Query: 573 DAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEW 632 D +Q VKARGG+ A L ++P A +L EV+R D +ER AS LR G V RA ++ Sbjct: 579 DPYQYGAVKARGGLLATLAHEVPDAVELREVFRQHDEKERAASKRLRTGVLPDVERAADF 638 Query: 633 YRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAA--- 689 Y RLH G + D AAG+++LL+ T + DALNR + +IAA Sbjct: 639 YAGAGRLHAGSVTAMLDDALAGWREDVAAGKDSLLVASTHDYVDALNRAAQQSMIAAGVV 698 Query: 690 -DQPAVIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNN 748 A+ + G VGD I++RRND L D VRNG RW+I A+D G+ Sbjct: 699 DGAEAIAVSSGQYAHVGDTILTRRNDYELTT-------SSGDVVRNGQRWQIEAID-GDG 750 Query: 749 RVAARRLHD-GARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLG-ENTTRALLYV 806 V ARRL D A YL EH+ GYA T H+AQG T D V G RA +YV Sbjct: 751 FVLARRLDDTAATVRLHPAYLAEHVQLGYASTGHAAQGATVDVARVVAGVGQIDRAGVYV 810 Query: 807 AMTRGRSANTAYLHERIAGENEHRQPNGVHIPRRGTAKEAAQRARTII 854 +TRGR AN Y+ E + G++E G + +E+AQ AR ++ Sbjct: 811 PLTRGREANYLYMAESMPGDSE----TGHGVVTATQRRESAQYARDLL 854 >tr|Q0ZKD7|Q0ZKD7_9CORY Tax_Id=373068 SubName: Full=Putative uncharacterized protein;[Corynebacterium sp. L2-79-05] Length = 1144 Score = 399 bits (1026), Expect = e-109 Identities = 296/893 (33%), Positives = 420/893 (47%), Gaps = 69/893 (7%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTR-TPVWLCAGDAHTA 59 +LTIA+++ S+ YY T YY+E T+ VW+ A A + Sbjct: 7 VLTIARMNAHSVAYYQSTVAEDQGPD-----------SYYSEDGTKPAEVWIKASHATNS 55 Query: 60 AKLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGAS-GRAFGNRGVHGFDLTFCAPKSVSL 118 + V+ G D + V W D+ AP+G GR G GV GFDLTFCAPKSVSL Sbjct: 56 TLVSAHLGVEN-GETVDGKTVHDWFDNAVAPSGVKLGRVPGADGVPGFDLTFCAPKSVSL 114 Query: 119 IRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLL--RLPGLVAIA 176 + L L+Y++ HAGYTR +P EK L+ +L G+ + Sbjct: 115 LWGLGDDPELRMLIDQAHQEAVSEALDYVSEHAGYTRRQDPAVSEKRLMIEKLRGISGVK 174 Query: 177 YQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQS 236 Y+H TSRAGDPH+H+HV++ N+Q DG++ ++D +YHEA+AAG++YQATLR L + Sbjct: 175 YEHRTSRAGDPHVHSHVLLANKQLCQDGKIRTLDSKGIYHEARAAGMVYQATLREILSRK 234 Query: 237 LGFEWLPVDPATGMAEVAGIAPESVTA-WSQRSSQLREWAAGNLALADGQNLSPAQLSAA 295 LGFEW + G AE++G+ + +S R+ ++ +W N G A Sbjct: 235 LGFEWGEI--VNGCAEISGLDDRKLLEDFSTRAREIDQWQENN-----GLETRSNYQRIA 287 Query: 296 QKATRPAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSR-QPFDRRRLAAAA 354 QK TR K +S EL A W E + +G++ F L +A Sbjct: 288 QKITRQTKDLDVSLDELEAQWAQREHSETVRGFITSLEKSLVNDGAQIYRFGIESLPDSA 347 Query: 355 EQI-----DKAGFTRADLVEIVGAQLPVDTEQS--PRRLVEAAVEEI-----GILLTAAR 402 + + +++ FTRAD+ E V LPV + R +E+ + + + +T + Sbjct: 348 DILAEVIAERSTFTRADVAEKVAELLPVGAVEPHLMLRTIESLTDAVLASDDSLSVTPDK 407 Query: 403 QP----HQREGHDRFTLDRILAE-EAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVE 457 P QREG RFT ++ E E A+ D D + LS +Q + Sbjct: 408 DPAVDNTQREGAQRFTTTAVIDEVEQAVRLATDVVDAGVSAESIKSIPGALSENQASAMR 467 Query: 458 NIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDV 517 + SP+ + APAGAGKT+SL+A A A + V LAPTG A DV + E D Sbjct: 468 QVVKSPYRASVIVAPAGAGKTSSLKA-ARSAWEQAGKTVVGLAPTGKAADVMVGEAVADE 526 Query: 518 GYTIAKALHELDKGT-------LTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVL 570 TIA+AL + T L +VVVDEA MV +TVL Sbjct: 527 SMTIARALRVGNASTPGQRARALGWDRNTVVVVDEAGMVASPELVEILSTVKAAGARTVL 586 Query: 571 VGDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAV 630 VGD Q + VKAR G+ A L +LP A +L+EV+R R +ER AS LR G + RA Sbjct: 587 VGDPQQYSAVKARSGLLATLAEELPDAVELTEVFRQRSEKEREASTWLRSGDKGLIERAA 646 Query: 631 EWYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALN-----RRIHRD 685 +WY ++R+H G + +DT G+ +LLI T E ALN R R Sbjct: 647 QWYADNNRVHAGSVTAMLDDALAGWAKDTEHGKQSLLIASTREQVGALNAAAQKTRAERG 706 Query: 686 IIAADQPAVIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDP 745 + Q + + G +GD I++R ND L + D VRNG RW + + Sbjct: 707 ELDLQQSRIRLSDGLEAYIGDTILTRSNDYEL-------VTSAGDVVRNGQRWMVESF-T 758 Query: 746 GNNRVAARRLHD-GARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLG-ENTTRAL 803 + RRL D A + DYLR+ GYA T HSAQG T D V G +A Sbjct: 759 ADGAAQVRRLDDTSATVTLSSDYLRDSAQLGYASTGHSAQGATVDIARVVSGVGQLDKAS 818 Query: 804 LYVAMTRGRSANTAYLHERIAGENEHRQPNGVHIPRRGTAKEAAQRARTIIAN 856 +YV MTRGR N Y+ E G+++ G R +E+ AR ++A+ Sbjct: 819 VYVPMTRGRDGNFLYITEEQPGDSD----TGHGKTRPKQRRESKGYARDLLAH 867 >tr|Q8FLG9|Q8FLG9_COREF Tax_Id=152794 SubName: Full=Putative conjugal transfer protein traA;[Corynebacterium efficiens] Length = 1186 Score = 394 bits (1013), Expect = e-107 Identities = 316/900 (35%), Positives = 433/900 (48%), Gaps = 88/900 (9%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTRTPV--WLCAGDAHT 58 MLTI K+ S+ YY T YY+E D R P W+ + + Sbjct: 1 MLTIGKMHGESVAYYESTVDACVAERGPDG--------YYSE-DGRRPATAWVVSPSSRL 51 Query: 59 AAKLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGAS-GRAFGNRGVHGFDLTFCAPKSVS 117 A + V+ +G + V +W + AP+G S GR G GV GFDLTFCAPKSVS Sbjct: 52 EASVSAFLGVE-SGDVVAGKQVAKWFNSAQAPSGKSLGRRPGASGVPGFDLTFCAPKSVS 110 Query: 118 LIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRV---HNPVTGEKDLLRLPGLVA 174 L+ + L YL+ HAGYTR H+P E L R+ GL Sbjct: 111 LVWGFGDSSMKKIVDEAHAQAVSAA-LSYLSEHAGYTRKASEHDP--NEMILARVSGLSG 167 Query: 175 IAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELH 234 + Y+H+TSRAGDPH+H+HV++ NRQ DG+ ++D S+YHEA+AAG++YQ+ LR L Sbjct: 168 VKYEHKTSRAGDPHVHSHVLLSNRQLCPDGKSRTLDSKSVYHEARAAGMLYQSVLRSTLS 227 Query: 235 QSLGFEWLPVDPATGMAEVAGI-APESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLS 293 ++LG +W V + G AE+AG+ APE + A+S R ++ +W N A G + Sbjct: 228 KNLGVQWAEV--SNGCAEIAGLDAPEVIEAYSTRMREINDWKHENGADFAGAS------R 279 Query: 294 AAQKATRPAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAA 353 Q TR K EL A W A G+++ D E + + AA Sbjct: 280 MGQAITRRVKDTDTPMEELHARWMAHSVGMKVYDTVASFAQNTASESAHREVTLPSPAAV 339 Query: 354 AEQI--DKAGFTRADLVEIVGAQLPVDTEQSPRRL---VEAAVEEI-------GILLTAA 401 + ++ FTRADLVE +PV +P + VEA V++I + A Sbjct: 340 INAVIEQRSTFTRADLVEKTAELMPVGI--APEAIVGHVEAIVDQIIAEELAWSVNPDMA 397 Query: 402 RQPHQ--REGHDRFTLDRILAE--------EAALLQLVDAQDIRAELWVKERDTEGLSPD 451 R + REG RFT + ++ E A + + VDA IR +DT LS D Sbjct: 398 RSHSRTAREGSQRFTAEAVVEEVNDGIDLATARVNRGVDASSIR-----PIKDT--LSVD 450 Query: 452 QKRVVENIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIR 511 Q R + + S + + APAGAGKT+SL+A A A R V LAPTG A DV +R Sbjct: 451 QARAMRAVVASHYRASVVVAPAGAGKTSSLKA-ARQAWERAGKTVVGLAPTGKAADVMVR 509 Query: 512 EGAGDVGYTIAKALHELDKGT-----LTLG--HLDLVVVDEAAMVGXXXXXXXXXXXXXX 564 E TIAKAL + T L LG +VVVDEA MV Sbjct: 510 EDVAHTSATIAKALVGTREMTPKQIALKLGWDASTVVVVDEAGMVATPDMATLLQVTAAA 569 Query: 565 XXKTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPA 624 + V VGD HQ + VKAR GM A L +LP + +L+EV+R + ER AS LR+G Sbjct: 570 DARIVFVGDPHQYSAVKARSGMLATLAYELPDSVELTEVFRQKHAGERLASQLLRNGDET 629 Query: 625 PVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHR 684 RA +WY ++RLH G + +D G +LL+ T E D LNR + Sbjct: 630 DTARAAQWYADNNRLHAGSSTAMLMDALTSWAKDKDKGLESLLVASTREDVDLLNRLAQQ 689 Query: 685 DIIAADQPA-------VIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNR 737 + D A V + GH+ VGD+I+++RN+ L + DA DI VRNG R Sbjct: 690 --VCGDTGAINPLGHQVRLSSGHQGFVGDVILTKRNNYDL-LTDAGDI------VRNGQR 740 Query: 738 WRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLG- 796 W I V + A R A A DY+++H+ GYA T H+AQG T DT H V G Sbjct: 741 WIIQDVHEDGSMTARRMDDTHATAHLPVDYVKDHVQLGYASTGHAAQGATVDTCHVVAGL 800 Query: 797 ENTTRALLYVAMTRGRSANTAYLHERIAGENEHRQPNGVHIPRRGTAKEAAQRARTIIAN 856 RA +YV +TRGR N YL + AG+ + + + RR E + AR ++ N Sbjct: 801 GQVDRAGVYVPLTRGRYENHLYLMDTRAGDPDTGHGSLLVEERR----ETPEYARDLLIN 856 >tr|Q9EUN8|Q9EUN8_CORGL Tax_Id=1718 (traA)SubName: Full=Transfer protein homolog TraA;[Corynebacterium glutamicum] Length = 1160 Score = 394 bits (1013), Expect = e-107 Identities = 307/890 (34%), Positives = 424/890 (47%), Gaps = 72/890 (8%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTR-TPVWLCAGDAHTA 59 MLTIAK+ S+ YY T +YY+E T+ W+ A A Sbjct: 1 MLTIAKMHGESVAYYESTVTTSDDKISSPD-------DYYSEDGTQPATAWIQARTEAQA 53 Query: 60 AKLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGAS-GRAFGNRGVHGFDLTFCAPKSVSL 118 + VQ G D + V +W + APNG GRA + GV GFDLTFCAPKSVSL Sbjct: 54 TTVATALGVQN-GAQVDGDDVGQWFNHAIAPNGHKLGRAPKSSGVPGFDLTFCAPKSVSL 112 Query: 119 IRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLL-RLPGLVAIAY 177 I L L YL+ H+GYTR + ++ R+ L + Y Sbjct: 113 IWGLTNDTDVRSTVDLAHHRAVTTALSYLSEHSGYTRRADDHDRSAMIIDRVEALSGVRY 172 Query: 178 QHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSL 237 +H TSRAGDPHLH HV++ N+Q DG+ ++DG LYHEA+AAG IYQA LR EL ++L Sbjct: 173 EHRTSRAGDPHLHAHVLLANKQLSRDGKWRTLDGVGLYHEARAAGTIYQAVLREELSRTL 232 Query: 238 GFEWLPVDPATGMAEVAGIAPES-VTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAAQ 296 G +W D G AE+ G+ + +S R+ ++ +W A N G A Q Sbjct: 233 GVQW--ADTVHGCAEIIGLDDRGLIEDFSTRAREIDQWIADN-----GVGPDAAFARIGQ 285 Query: 297 KATRPAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSR--QPFDRRRLAAAA 354 K TR K +EL W+A R+ D S QP + Sbjct: 286 KKTRQVKDLDTPLSELEQNWKA-----RVADTAAPQFVEALSPHSHSPQPVALPTVDEVL 340 Query: 355 EQI--DKAGFTRADLVEIVGAQLPVD---TEQSPRRLVEAAVEEIGILLTAARQPHQ--- 406 E + +++ FTRAD+VE LPV EQ + A + G + P + Sbjct: 341 EAVTRERSTFTRADVVEAATELLPVGAVAAEQIYDTVEHLADQVCGGQVAWTVTPEKDRQ 400 Query: 407 -----REGHDRFTLDRILAEEAALLQL---VDAQDIRAELWVKERDTEG-LSPDQKRVVE 457 REG RFT + ++ E + L V + A + EG LS +Q + Sbjct: 401 VDRSAREGSQRFTSEAVVEEVNRGIDLATTVTGLGVSASMIT---PVEGQLSLEQAEAMR 457 Query: 458 NIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDV 517 + +S +L + APAGAGKT+SL+A T A + +V LAPTG A DV + E Sbjct: 458 AVVSSRYLASVVIAPAGAGKTSSLKAART-AWEQAGKQVIGLAPTGKAADVMVGEDVAHS 516 Query: 518 GYTIAKAL-----HELDKGTLTLGHL--DLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVL 570 T+A+ L ++++ TLG ++VVDEA MV + VL Sbjct: 517 SSTLARVLRGVEDQDVEQAVATLGWTTDHVIVVDEAGMVSTPEMVRVLELAHVADARVVL 576 Query: 571 VGDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAV 630 VGD +Q VKARGG+ + L +LP A +L EV+R D +ER AS LR G V RA Sbjct: 577 VGDPYQYGAVKARGGLLSTLAHELPDAVELREVFRQHDEKERVASKRLRTGVLPDVERAA 636 Query: 631 EWYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAA- 689 ++Y RLH G + D AAG+++LL+ T + DALNR + +IAA Sbjct: 637 DFYAGAGRLHAGSVTAMLDDALAGWRGDVAAGKDSLLVASTHDYVDALNRAAQQSMIAAG 696 Query: 690 ---DQPAVIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPG 746 A+ A G VGD I++RRND L G D VRNG RW++ A++ G Sbjct: 697 VVDGAEAIGVAAGQFAHVGDTILTRRNDYELTT-------SGGDVVRNGQRWQVEAIE-G 748 Query: 747 NNRVAARRLHD-GARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLG-ENTTRALL 804 + V ARRL D A YL EH+ GYA T H+AQG T D V G RA + Sbjct: 749 DGFVLARRLDDTAATVRLPAGYLAEHVQLGYASTGHAAQGATVDVARVVAGVGQIDRAGV 808 Query: 805 YVAMTRGRSANTAYLHERIAGENEHRQPNGVHIPRRGTAKEAAQRARTII 854 YV +TRGR AN Y+ E + G+++ +G P + +E++Q AR ++ Sbjct: 809 YVPLTRGREANYLYMAESMPGDSD--TGHGTTTPTQ--RRESSQYARDLL 854 >tr|Q84GD9|Q84GD9_CORGL Tax_Id=1718 (traA)SubName: Full=TraA;[Corynebacterium glutamicum] Length = 1164 Score = 393 bits (1010), Expect = e-107 Identities = 310/891 (34%), Positives = 425/891 (47%), Gaps = 74/891 (8%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTR-TPVWLCA---GDA 56 MLTIAK+ S+ YY T +YY+E T+ W+ A A Sbjct: 1 MLTIAKMHGESVAYYESTVTTSDDKISSPD-------DYYSEDGTQPATAWIQARTEAQA 53 Query: 57 HTAAKLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGAS-GRAFGNRGVHGFDLTFCAPKS 115 T A +G+ + + G AD V +W + AP+G GRA + GV GFDLTFCAPKS Sbjct: 54 TTVATALGVKNGAQVNG-AD---VGQWFNQAIAPSGHKLGRAPKSSGVPGFDLTFCAPKS 109 Query: 116 VSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLL-RLPGLVA 174 VSLI L L YL+ HAGYTR + ++ R+ L Sbjct: 110 VSLIWGLTDDTDVRSTVDRAHHRAVTTALSYLSEHAGYTRRADDHDRSMMIIDRVEALSG 169 Query: 175 IAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELH 234 + Y+H TSRAGDPHLH HV++ N+Q DG+ ++DG SLYHEA+AAG IYQA LR EL Sbjct: 170 VRYEHRTSRAGDPHLHAHVLLANKQLCRDGKWRTLDGVSLYHEARAAGTIYQAVLREELS 229 Query: 235 QSLGFEWLPVDPATGMAEVAGIAPES-VTAWSQRSSQLREWAAGNLALADGQNLSPAQLS 293 ++LG W D G AE+ G+ + +S R+ ++ +WAA N G A Sbjct: 230 RTLGVAW--ADTVHGCAEIIGLDDRGLIEDFSTRAREIDQWAADN-----GVGSDAAFER 282 Query: 294 AAQKATRPAKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAA 353 QK TR K + +EL W+A R+ + S P L Sbjct: 283 MGQKKTRQVKDLDMPLSELEQNWKA-----RVAETSARKFVEALSPHSHSP-QSVALPTV 336 Query: 354 AEQID-----KAGFTRADLVEIVGAQLPVD--TEQSPRRLVEAAVEEI-GILLTAARQPH 405 E +D ++ FTRAD+VE LPV T + VE +++ G + P Sbjct: 337 DEVLDAVTCERSTFTRADVVEAATELLPVGAVTAEEIYDTVERLADQVCGGQVAWTVTPE 396 Query: 406 Q--------REGHDRFTLDRILAEEAALLQLVDAQDIRAELWVKERDTEG-LSPDQKRVV 456 + REG RFT + ++ E + L R EG LS DQ + Sbjct: 397 KDRQVDRSAREGSQRFTSEAVVEEVNRGIDLATTVTGRGVDASMIAPVEGQLSADQAEAM 456 Query: 457 ENIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGD 516 + +S +L + APAGAGKT+SL+A A A + +V LAPTG A DV + E Sbjct: 457 RAVVSSRYLASVVIAPAGAGKTSSLKA-ARAAWEQAGKQVVGLAPTGKAADVMVGEDVAH 515 Query: 517 VGYTIAKAL-----HELDKGTLTLGHL--DLVVVDEAAMVGXXXXXXXXXXXXXXXXKTV 569 T+A+ L ++++ TLG ++VVDEA MV + V Sbjct: 516 SSSTLARVLRRVEDQDVEQAVATLGWSTDHVIVVDEAGMVSTPEMVRVLELAHAADARVV 575 Query: 570 LVGDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRA 629 LVGD +Q VKARGG+ A L ++P A +L EV+R D +ER AS LR G V RA Sbjct: 576 LVGDPYQYGAVKARGGLLATLAHEVPDAVELREVFRQHDEKERAASKRLRTGVLPDVERA 635 Query: 630 VEWYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAA 689 ++Y RLH G + D AAG+++LL+ T + DALNR + +IAA Sbjct: 636 ADFYAGAGRLHAGSVTAMLDDALAGWRGDVAAGKDSLLVASTHDYVDALNRAAQQSMIAA 695 Query: 690 ----DQPAVIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDP 745 A+ + G VGD I++RRND L D VRNG RW++ A++ Sbjct: 696 GVVDGAEAIELSLGQYAHVGDTILTRRNDYELTT-------SSGDVVRNGQRWQVEAIE- 747 Query: 746 GNNRVAARRLHD-GARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLG-ENTTRAL 803 G+ V ARRL D A YL EH+ GYA T H+AQG T D V G RA Sbjct: 748 GDGFVLARRLDDTAATVRLHPAYLAEHVQLGYASTGHAAQGATVDVARVVAGVGQIDRAG 807 Query: 804 LYVAMTRGRSANTAYLHERIAGENEHRQPNGVHIPRRGTAKEAAQRARTII 854 +YV +TRGR AN Y+ E + G++E G + +E+AQ AR ++ Sbjct: 808 VYVPLTRGREANYLYMAESMPGDSE----TGHGVVTATQRRESAQYARDLL 854 >tr|Q8RMJ7|Q8RMJ7_CORDI Tax_Id=1717 (traA)SubName: Full=TraA;[Corynebacterium diphtheriae] Length = 1116 Score = 391 bits (1005), Expect = e-106 Identities = 300/891 (33%), Positives = 411/891 (46%), Gaps = 72/891 (8%) Query: 1 MLTIAKLSRWSINYYNDTXXXXXXXXXXXXXXXXXXXEYYAEHDTRTP--VWLCAGDAHT 58 MLTIAK+ S+ YY T YY+E D + P VWL Sbjct: 1 MLTIAKMGAHSVAYYQSTVDENRGPD-----------SYYSE-DGKQPASVWLRGEKLSE 48 Query: 59 AAKLVGLTDVQRAGGPADPEVVQRWLDDGTAPNGAS-GRAFGNRGVHGFDLTFCAPKSVS 117 + +G + G + V+ W + AP+GA G A V GFDLTFCAPKSVS Sbjct: 49 VSAFLGTDN----GAIVSGKTVENWFNKAVAPSGAGLGNAPRKDSVPGFDLTFCAPKSVS 104 Query: 118 LIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTR--VHNPVTGEKDLLRLPGLVAI 175 L+ + A L+YL+ HAGYTR V P + +L G+ + Sbjct: 105 LLWGMGADSDVRGIVDEAHQAAVSQALDYLSEHAGYTRKQVKEPAGKRLVVEKLAGISGV 164 Query: 176 AYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQ 235 Y+H TSRAGDPH+H+HV++ N+Q DG++ ++DG SLYHEA+AAG++YQAT+R L Q Sbjct: 165 KYEHRTSRAGDPHVHSHVLLANKQLCRDGKVRTLDGVSLYHEARAAGMVYQATVREILSQ 224 Query: 236 SLGFEWLPVDPATGMAEVAGI-APESVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSA 294 LG E+ D G AE+ G+ PE + ++S R+ ++ +W A N G A Sbjct: 225 KLGVEF--GDVVNGCAEIVGLDDPELIASYSTRAREIDQWQADN-----GLETRAAYERI 277 Query: 295 AQKATRPAKPEQLSFAELRAAWRADERGVRLDD---XXXXXXXXXXXEGSRQPFDRRRLA 351 AQK TR K EL W E G ++ + E S + Sbjct: 278 AQKITRRTKDTDTPLEELEIEWARAEHGAQVREFVAGLEPKNEADARESSEDFLPKPSQI 337 Query: 352 AAAEQIDKAGFTRADLVEIV------GAQLPVDTEQSPRRLVEAAVEEIGILLTAARQPH 405 A +++ FTRAD+ E V GA P D + LV+AA+ G + Sbjct: 338 LAEVAAERSTFTRADVAEKVAELIRPGAISPEDMTVTVEGLVDAALAAHGTWSVTPEKSR 397 Query: 406 -----QREGHDRFTLDRILAEEAALLQLVDAQDIRAELWVKERDTEG-LSPDQKRVVENI 459 QREG ++T ++ E + + A+ R + EG LSP Q + + Sbjct: 398 ELDSTQREGSQKYTTVEVVDEVERGVDMATARVERGVTAESIQPVEGELSPAQADAMRAV 457 Query: 460 ATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGY 519 S +L + APAGAGKT+SL++ A A V LAPTG A DV + E D Sbjct: 458 VGSDYLASVVVAPAGAGKTSSLKS-AHHAWNMAGKHVIGLAPTGKAADVMVGENVADESM 516 Query: 520 TIAKA-------LHELDKGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVG 572 TIA+A + E L +VVVDEA MV + V VG Sbjct: 517 TIARAFVGTDDLIPEHTAVKLGWNRDTVVVVDEAGMVSNPDTIRVLETATAAGARVVFVG 576 Query: 573 DAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEW 632 D Q + VKAR G+ A L +LP A +L EV+R RD ER AS LR G A V RA EW Sbjct: 577 DPEQYSAVKARSGLLATLSHELPDAVELREVFRQRDAGEREASKWLRGGEEADVSRAAEW 636 Query: 633 YRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQP 692 Y + RLH G + DTAAG+ +LL+ T + ALN + I A++ Sbjct: 637 YMQNKRLHAGSVTAMMDDALAGWRDDTAAGKQSLLVAATRDQVTALNAAAQK--IRAERG 694 Query: 693 AVI------AARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPG 746 + + G VGD+I++RRND L + D VRNG RW + ++ Sbjct: 695 EINPEHRLGLSDGLTAGVGDVILTRRNDAKL-------VTSNGDVVRNGQRWVVDSIGKD 747 Query: 747 NNRVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLG-ENTTRALLY 805 + A R D A DYL +H GYA T HS+QG T D V G N ++ +Y Sbjct: 748 GSITARRCDDDLATVTLNRDYLDKHTQLGYAATGHSSQGATVDVARVVAGVGNLDKSSVY 807 Query: 806 VAMTRGRSANTAYLHERIAGENEHRQPNGVHIPRRGTAKEAAQRARTIIAN 856 V MTRGR N Y+ E G+ E I RR E+ + AR ++ + Sbjct: 808 VPMTRGREGNFLYIAETQPGDTETGHGQVSQIIRR----ESDEYARDLLVS 854 >tr|C8NKP5|C8NKP5_COREF Tax_Id=196164 SubName: Full=Putative uncharacterized protein;[Corynebacterium efficiens YS-314] Length = 1067 Score = 352 bits (902), Expect = 2e-94 Identities = 272/754 (36%), Positives = 374/754 (49%), Gaps = 74/754 (9%) Query: 144 LEYLAAHAGYTRV---HNPVTGEKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQA 200 L YL+ HAGYTR H+P E L R+ GL + Y+H+TSRAGDPH+H+HV++ NRQ Sbjct: 17 LSYLSEHAGYTRKASEHDP--NEMILARVSGLSGVKYEHKTSRAGDPHVHSHVLLSNRQL 74 Query: 201 RADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFEWLPVDPATGMAEVAGI-APE 259 DG+ ++D S+YHEA+AAG++YQ+ LR L ++LG +W V + G AE+AG+ APE Sbjct: 75 CPDGKSRTLDSKSVYHEARAAGMLYQSVLRSTLSKNLGVQWAEV--SNGCAEIAGLDAPE 132 Query: 260 SVTAWSQRSSQLREWAAGNLALADGQNLSPAQLSAAQKATRPAKPEQLSFAELRAAWRAD 319 + A+S R ++ +W N A G + Q TR K EL A W A Sbjct: 133 VIEAYSTRMREINDWKHENGADFAGAS------RMGQAITRRVKDTDTPMEELHARWMAH 186 Query: 320 ERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQI--DKAGFTRADLVEIVGAQLPV 377 G+++ D E + + AA + ++ FTRADLVE +PV Sbjct: 187 SVGMKVYDTVASFAQNTASESAHREVTLPSPAAVINAVIEQRSTFTRADLVEKTAELMPV 246 Query: 378 DTEQSPRRL---VEAAVEEI-------GILLTAARQPHQ--REGHDRFTLDRILAE---- 421 +P + VEA V++I + AR + REG RFT + ++ E Sbjct: 247 GI--APEAIVGHVEAIVDQIIAEELAWSVNPDMARSHSRTAREGSQRFTAEAVVEEVNDG 304 Query: 422 ----EAALLQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAGK 477 A + + VDA IR +DT LS DQ R + + S + + APAGAGK Sbjct: 305 IDLATARVNRGVDASSIR-----PIKDT--LSVDQARAMRAVVASHYRASVVVAPAGAGK 357 Query: 478 TTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGT----- 532 T+SL+A A A R V LAPTG A DV +RE TIAKAL + T Sbjct: 358 TSSLKA-ARQAWERAGKTVVGLAPTGKAADVMVREDVAHTSATIAKALVGTREMTPKQIA 416 Query: 533 LTLG--HLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQL 590 L LG +VVVDEA MV + V VGD HQ + VKAR GM A L Sbjct: 417 LKLGWDASTVVVVDEAGMVATPDMATLLQVTAAADARIVFVGDPHQYSAVKARSGMLATL 476 Query: 591 CADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXX 650 +LP + +L+EV+R + ER AS LR+G RA +WY ++RLH G Sbjct: 477 AYELPDSVELTEVFRQKHAGERLASQLLRNGDETDTARAAQWYADNNRLHAGSSTAMLMD 536 Query: 651 XXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPA-------VIAARGHRIA 703 + +D G +LL+ T E D LNR + + D A V + GH+ Sbjct: 537 ALTSWAKDKDKGLESLLVASTREDVDLLNRLAQQ--VCGDTGAINPLGHQVRLSSGHQGF 594 Query: 704 VGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAF 763 VGD+I+++RN+ L + DA DI VRNG RW I V + A R A A Sbjct: 595 VGDVILTKRNNYDL-LTDAGDI------VRNGQRWIIQDVHEDGSMTARRMDDTHATAHL 647 Query: 764 TGDYLREHITYGYAITVHSAQGVTADTTHAVLG-ENTTRALLYVAMTRGRSANTAYLHER 822 DY+++H+ GYA T H+AQG T DT H V G RA +YV +TRGR N YL + Sbjct: 648 PVDYVKDHVQLGYASTGHAAQGATVDTCHVVAGLGQVDRAGVYVPLTRGRYENHLYLMDT 707 Query: 823 IAGENEHRQPNGVHIPRRGTAKEAAQRARTIIAN 856 AG+ + + + RR E + AR ++ N Sbjct: 708 RAGDPDTGHGSLLVEERR----ETPEYARDLLIN 737 >tr|C0U9P2|C0U9P2_9ACTO Tax_Id=526225 SubName: Full=DNA primase;[Geodermatophilus obscurus DSM 43160] Length = 1837 Score = 271 bits (692), Expect = 4e-70 Identities = 272/841 (32%), Positives = 361/841 (42%), Gaps = 104/841 (12%) Query: 93 ASGRAFGNRGVHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAG 152 A R V G+DLTF KSVS + AL +V L +L HA Sbjct: 177 ARASRLATRAVAGYDLTFSPVKSVSALWALAPREVAERVETAHAAAVADT-LAWLEKHAC 235 Query: 153 YTRVHNPVTGEKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGT 212 +TR+ G + GL+A + H SRAGDP LHTHV V N+ DG+ ++DG Sbjct: 236 FTRLG---AGGARQVETTGLIAAVFTHRDSRAGDPDLHTHVAVSNKVQTDDGRWRAVDGR 292 Query: 213 SLYHEAKAAGVIYQATLRRELHQSLGFEWLPV---DPATG-MAEVAGIAPESVTAWSQRS 268 LY AA Y L L LG + +P + EV G+ +T WS R Sbjct: 293 VLYKANVAASEHYNTRLEAHLVAGLGVHFAERPGREPGKRTVREVVGVDSGLLTTWSSRR 352 Query: 269 SQLR----EWAAGNLALADGQNLSPAQLSAAQKAT---RPAKPEQLSFAELRAAWRADER 321 + + AAG A + ++ AQ+AT R AK E S AE RAAWR Sbjct: 353 QAIDVRRGQLAAGFQAEHGRPPTTSEAIALAQQATLETREAKHEPRSLAEQRAAWRKQAL 412 Query: 322 GV--------RLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQIDKAGFTRAD------- 366 GV + D G + + R +AAA + RA Sbjct: 413 GVLGSPSDLAAMLDRVLGRAPAPRPSGVPEVWVR---SAAATVLATVSGQRASWQFWHVC 469 Query: 367 -----LVEIVGAQLPVDTEQSPRRLVEAAVEE-----IGILLTAARQPHQRE-------- 408 LV G P D +++ R+ E A+ +G P R Sbjct: 470 AEAERLVRAAGLA-PGDVDRAVSRVTETALSPALSVPLGAPDAVVEPPELRRSDGASVYT 528 Query: 409 --GHDRFTLDRILAEEAALLQLVDAQDIR------AELWVKERDTEG--LSPDQKRVVEN 458 G R+T +L EA L+ D R EL + E G L+P Q ++V + Sbjct: 529 VAGAQRYTSRAVLDAEALLVTAAGRTDGRRADPAVVELALLEATANGTELNPGQAQLVRD 588 Query: 459 IATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTA--RVFVLAPTGTAVDVAIREGAGD 516 +A S VQ APAGAGKTT ALAT+AR V LAP+ A V AG Sbjct: 589 LAGSGARVQLAVAPAGAGKTT---ALATLARAWTAGGGTVLGLAPSAVAAAVLRSALAGR 645 Query: 517 VGYTIAKALHELDKGT-----LTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLV 571 T+AK LD GT +G LVVVDEA M G LV Sbjct: 646 CD-TLAKLSWSLDAGTPPDWVAGIGPGTLVVVDEAGMAGTVELARAVEHILRRGGSVRLV 704 Query: 572 GDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVE 631 GD QL V A GG+ ++ A A L+++ R +P E A++ALRDG + Sbjct: 705 GDPQQLTAVAA-GGVLGEIAAT-HGAVTLTQLVRFAEPAEAAATVALRDGDTT----GLG 758 Query: 632 WYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQ 691 +Y R+H GD + D AAG++ALL+ T E+ LN R D + Sbjct: 759 FYLDVGRVHVGDLVTCAEQAYAAWAADRAAGKDALLLAATREVVARLNERARADRLVHSP 818 Query: 692 ----PAVIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGN 747 P V+ A G R GD +I+RRND TLP+ +D V+NG+R+ ++AV G+ Sbjct: 819 GPPGPEVVLADGTRAGAGDAVITRRNDRTLPL-------GASDWVKNGDRFTVHAVG-GD 870 Query: 748 NRVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVA 807 +A R Y+ EH+ GYA TVH AQGVTADT H VL +R LLYVA Sbjct: 871 GALAVVHTGTKRRLTLPAAYVGEHVRLGYAATVHGAQGVTADTCHTVLTGAESRQLLYVA 930 Query: 808 MTRGRSANTAYLHERIAGENEHR--QPNGVHIP----------RRGTAKEAAQRARTIIA 855 ++RGRSAN YL + + H P VH P R A+ +A AR +A Sbjct: 931 LSRGRSANHLYL-STVGDGDPHSIITPAAVHPPTATDLLVAMLARDDAQASATGARRALA 989 Query: 856 N 856 + Sbjct: 990 D 990 >tr|A1SH09|A1SH09_NOCSJ Tax_Id=196162 SubName: Full=DNA primase catalytic core, N-terminal domain;[Nocardioides sp.] Length = 1797 Score = 248 bits (633), Expect = 3e-63 Identities = 247/821 (30%), Positives = 343/821 (41%), Gaps = 98/821 (11%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V GFDLTF KSVS + AL +V L +L +TRV + G Sbjct: 208 VAGFDLTFSPVKSVSALWALAPKEVAADIRAAHDAAVVDT-LTWLEREVAHTRVGS---G 263 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 +++ GLVA A+ H SRAGDP LHTHV V N+ DG +++DG LY A Sbjct: 264 GVRQVKVRGLVAAAFTHRDSRAGDPDLHTHVAVSNKVQAEDGHWLALDGRLLYAAKVTAS 323 Query: 223 VIYQATLRRELHQSLGFEWLPVDPATG----MAEVAGIAPESVTAWSQRSSQLREWAAGN 278 Y + EL LG E+ D G + E+ G++ WS+R + A Sbjct: 324 EHYNTRVEAELVARLGVEFADRDDTVGGKVPVREIRGVSTTLTRWWSRRRVAIEARQAEI 383 Query: 279 LALADGQ-NLSPAQLSAAQKA------TRPAKPEQLSFAELRAAWRADERGVRLDDXXXX 331 A G+ P + A A TR AK + S E R WRA+ V D Sbjct: 384 AAEFQGRFGRPPTAIEAKSLADQATLETRDAKHGRRSEREQRDEWRAEADDVLGDPAEVD 443 Query: 332 XXXXXXX-------------------------EGSRQPFDRRRLAAAAE-QIDKAGFTRA 365 E SR ++ L A A+ Q +AG R Sbjct: 444 EMYSRAVGRRNGGRTATRDWVEDVAAATIAFVEESRATWNVWHLLAEAQRQARRAGIARD 503 Query: 366 DLVEIVGAQLPVDTEQSPRRLVEAAVEEIGILLTA-ARQPHQREGHDRFTLDRILAEEAA 424 D+ V + +S R V+ + E L + G +T ++L E Sbjct: 504 DVDRAVDQVVDAAISRSVRLGVDDPISEPPPLQRPDGASVYDVHGATLYTSAKVLLAEEE 563 Query: 425 LLQLVDAQ------DIRAELWVKERDTEG--LSPDQKRVVENIATSPWLVQPLSAPAGAG 476 +L L D+R E+ + G L+ Q + ++ATS +VQ APAG G Sbjct: 564 ILNLAGRTGGHALADVRVEVAIAGAAANGFELNDAQAAMARDLATSGAVVQLALAPAGTG 623 Query: 477 KTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGTLTL- 535 KTT++ LA A +V LAP+ A A ++G ++ L K T TL Sbjct: 624 KTTTMSVLAD-AWAAGGGQVIGLAPSAQA--------AHELGQAVSGYTDTLAKLTWTLA 674 Query: 536 --------------GHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVK 581 G LV+VDEA L+GD QLA V Sbjct: 675 NEPSVAWPRWIRDIGPQSLVIVDEAGQAATTELAAAVRFVAERGGAVRLIGDDQQLAAVG 734 Query: 582 ARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHT 641 A GG+ + A LSEV R DP E A+LA+R+G A A+ +Y + R+H Sbjct: 735 A-GGVLRDIQQQYG-ASTLSEVRRFDDPAEAAATLAVREGDAA----ALGFYADNARIHV 788 Query: 642 GDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQ---PAVIAAR 698 GD + D AAG +++L+ T E+ LN R D + A P V A Sbjct: 789 GDLSAVADQAYDSWASDRAAGLDSVLLAPTRELVCQLNARARADRLTATATVGPEVDLAD 848 Query: 699 GHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDG 758 G+R +VGD+I++RRN L V ++ V+NG+RWRI V G+ + AR L G Sbjct: 849 GNRGSVGDVIVTRRNSRRLVV-------SRSNWVKNGDRWRIEKV-LGDGGLLARHLELG 900 Query: 759 ARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAY 818 DY+ +H+ GYA TVH AQG+TADT H V TR LYV ++RGR AN Y Sbjct: 901 RTVELPLDYVAQHVHLGYATTVHGAQGMTADTAHLVAAGEETRQTLYVGISRGRQANHIY 960 Query: 819 LHERIAGENEH-------RQPNGVHIPRRGTAKEAAQRART 852 L G+ R P + I ++ + R+ T Sbjct: 961 LDTGYDGDPHSLIDPKALRPPTAIDILAEILERDGSDRSAT 1001 >tr|A1SC49|A1SC49_NOCSJ Tax_Id=196162 SubName: Full=DNA primase catalytic core, N-terminal domain;[Nocardioides sp.] Length = 1967 Score = 241 bits (616), Expect = 3e-61 Identities = 244/809 (30%), Positives = 347/809 (42%), Gaps = 119/809 (14%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KSVS + AL A L ++ A +TR T Sbjct: 193 VAGYDLTFSPVKSVSTLWAL-ADPKTAAVIEGAHQSAIKDALNFIETKALFTRQG---TN 248 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 + + GL+A A+ H SRAGDP LHTHV V N+ DG+ ++IDG LY +A Sbjct: 249 GIRQVNVRGLLATAFTHRDSRAGDPDLHTHVAVANKVQTLDGKWLAIDGRLLYKAKVSAS 308 Query: 223 VIYQATLRRELHQSLGFEWL----PVDPATGMAEVAGIAPESVTAWSQRSSQL---REWA 275 Y L R L +LG + P + E+ G+ P+ +S+R + R+ Sbjct: 309 ETYNTALERHLGDALGVRFAERPNPDARKRPVREIVGVDPDLNHRFSKRRVSVEARRKEL 368 Query: 276 AGNLALADGQNLSPAQ-LSAAQKAT---RPAKPEQLSFAELRAAWRADE-------RGVR 324 A G+ +P + L AQ+AT R AK E S + R AW + RG++ Sbjct: 369 AAQFQATHGRPPTPIETLQLAQRATLETREAKHEPRSLNDQREAWDREAVEVLGSPRGLQ 428 Query: 325 ----------------LDDXXXXXXXXXXX----EGSRQPFDRRRLAAAAEQIDKAGFTR 364 + D EG R + + A A++ +A Sbjct: 429 QMLHGTLNPTAAGTAPVADAAWFAKTGDRIVTTMEGGRATWQYWHVYAEAQRQVRAANVP 488 Query: 365 ADLVEIVGAQL--------------PVDTEQSP---RRLVEAAVEEIGILLTAARQPHQR 407 D V V L P D P R+L A+V +G Sbjct: 489 TDQVSTVVGLLVSEVLDGRSVSITRPFDEISEPPELRKLDGASVYTVG------------ 536 Query: 408 EGHDRFTLDRILAEEAALLQL--------VDAQDIRAELWVKERDTEGLSPDQKRVVENI 459 G FT ++LA E L++ VD Q++ L E + L+ Q +V+ + Sbjct: 537 -GVHLFTSSKVLAAEERLVEAAGRRDGYAVDEQNVALALLESEANGVTLNAGQATLVKEM 595 Query: 460 ATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDV-- 517 ATS +Q APAG+GKTT++RALA A V LAP+ A D A+R G Sbjct: 596 ATSGARLQLAIAPAGSGKTTAMRALA-QAWTDGGGSVIGLAPSAAAAD-ALRVSMGSQID 653 Query: 518 --GYTIAKALHELDKGTLT----------LGHLDLVVVDEAAMVGXXXXXXXXXXXXXXX 565 T+AK H L++ +T +G LVV+DEA M Sbjct: 654 TQTDTLAKLTHSLEQSQVTGAEVPDWVAGIGPQTLVVIDEAGMADTLSLDIAVQHVLERG 713 Query: 566 XKTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAP 625 LVGD QLA + A GG+ + A A QL+E+ R DP E ASLALR+G Sbjct: 714 GSVRLVGDDQQLAAIGA-GGVLRDIRAT-HGALQLTELVRFTDPAEGAASLALREGKG-- 769 Query: 626 VRRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNR--RIH 683 A+ +Y DR+H GD + D AAG +A+++ T E+ LN+ R H Sbjct: 770 --EALGFYLDRDRVHVGDLATMTEDVFAAWQADRAAGLDAIMLAPTRELVSELNQQARAH 827 Query: 684 RDIIAADQPAVIAAR----GHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWR 739 R + AD +V AR G+ ++G+LII+R ND L D V+NG+RW Sbjct: 828 R-LEGADPASVGPARRLADGNEASIGELIITRTNDRKLRT-------SATDWVKNGDRWT 879 Query: 740 IYAVDPGNNRVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENT 799 + + G + H G +Y+ GYA TVH+AQGVT DT H + N Sbjct: 880 VLGLHEGGDLTVQHTQH-GRTVRLPREYVETSTELGYACTVHTAQGVTTDTMHGLATGNE 938 Query: 800 TRALLYVAMTRGRSANTAYLHERIAGENE 828 +R LY +TRG+S N YL ++ G+ + Sbjct: 939 SRQQLYTMLTRGKSGNHIYL--QVVGDGD 965 >tr|A1SIX0|A1SIX0_NOCSJ Tax_Id=196162 SubName: Full=DNA primase catalytic core, N-terminal domain;[Nocardioides sp.] Length = 1976 Score = 241 bits (614), Expect = 4e-61 Identities = 226/784 (28%), Positives = 347/784 (44%), Gaps = 87/784 (11%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KSVS++ A+ + L ++ + A +TR Sbjct: 193 VAGYDLTFSPVKSVSVLWAI-SDPKTAAVIERAHQAAIKDALGFIESKALFTRRGTNGVR 251 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 + D+ GLVA A+ H SRAGDP LHTHV V N+ DG+ ++IDG L+ +A Sbjct: 252 QVDVR---GLVATAFTHRDSRAGDPDLHTHVAVANKVQTLDGKWLAIDGRPLHKAVVSAS 308 Query: 223 VIYQATLRRELHQSLG--FEWLPVDPATG--MAEVAGIAPESVTAWSQRSSQL---REWA 275 Y L R L +LG FE P + A + E+ G+ PE +S+R + + R+ Sbjct: 309 ETYNTALERHLVDALGVRFEERPNEDARKRPVREIVGVDPELNRRFSKRRASVEDRRKVL 368 Query: 276 AGNLALADGQNLSPAQ-LSAAQKAT---RPAKPEQLSFAELRAAWRADERGV-------- 323 A G+ +P + + +Q+AT R AK E S AE R W + V Sbjct: 369 AAAFQATHGRPPTPVETIQLSQQATLETREAKHEPRSLAEQRETWSREAIEVLGTPQRVE 428 Query: 324 --------------RLDDXXXXXXXXXXX----EGSRQPFDRRRLAAAAEQIDKAGFTRA 365 L D EG+R + + A A++ + Sbjct: 429 HMVHGALNPKGAARSLADSAWFAKTTDRIVATMEGARSTWQFWHVYAEAQRQVRGANVPT 488 Query: 366 D----LVEIVGAQLPVDTEQSPRRLVEAAVEEIGILLTAARQPHQREGHDRFTLDRILAE 421 + +V+++ +++ S R +A E + + + + G + FT ++LA Sbjct: 489 NQVPHVVDLLVSEVLDGRSVSMARAWDAISEPVELRRADGTSVYTQSGAELFTSGKVLAA 548 Query: 422 EAALLQLVDAQDIRA------ELWVKERDTEG--LSPDQKRVVENIATSPWLVQPLSAPA 473 E L+++ D A +L + E G L+ Q +V +ATS +Q APA Sbjct: 549 EQRLVEVAGRHDGYAVTTDSVDLALLESTANGITLNAGQATLVREMATSSARLQLAIAPA 608 Query: 474 GAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGTL 533 G+GKTT++RALA+ A + LAP+ A D A+R T+AK H L++ Sbjct: 609 GSGKTTAMRALAS-AWADGGGTIIGLAPSAAAAD-ALRSQIDTQTDTLAKLTHSLEQARE 666 Query: 534 T-------LGHLD---LVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKAR 583 + + +D LVV+DEA M L+GD QL+ + A Sbjct: 667 SGAAMPAWVARIDSSTLVVIDEAGMADTLSLDAAVSYILERGGSVRLIGDDQQLSAIGA- 725 Query: 584 GGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGD 643 GG+ + A A QL+E+ R +DP E ASLALR+G P ++ +Y DR+H GD Sbjct: 726 GGVLRDIRAT-HGALQLTELVRFKDPAEGAASLALREGKP----ESLGFYLDRDRVHVGD 780 Query: 644 XXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAARG---- 699 + D AAG +++++ T ++ LN++ + +PA +AA G Sbjct: 781 LATMTEDVFAAWQADRAAGLDSIMLAPTRDLVSELNQQARAHRLEGIEPADVAASGPVRR 840 Query: 700 ----HRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRL 755 + ++G+LII+R ND L D V+NG+RW + + + Sbjct: 841 LADGNEASIGELIITRENDRRLRT-------SATDWVKNGDRWNVLEIHDDGDLTVQHTQ 893 Query: 756 HDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSAN 815 H G DY+ GYA TVH+AQGVTADT H + + +R LY MTRG AN Sbjct: 894 H-GRTVRLPADYVARSSELGYACTVHTAQGVTADTMHGLATGSESRQQLYTMMTRGVHAN 952 Query: 816 TAYL 819 YL Sbjct: 953 HVYL 956 >tr|D1BY40|D1BY40_9MICO Tax_Id=446471 SubName: Full=TrwC relaxase;[Xylanimonas cellulosilytica DSM 15894] Length = 1175 Score = 239 bits (610), Expect = 1e-60 Identities = 241/780 (30%), Positives = 323/780 (41%), Gaps = 86/780 (11%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V GFDLTF PKSVS++ + D + ++R Sbjct: 138 VAGFDLTFSVPKSVSVLWGVADEDTQAMIVEAHHAAVAEV-MGLFEREVAFSRTGTDAVA 196 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARA-DGQLVSIDGTSLYHEAKAA 221 D++ G+ A AY H SRAGDP LHTHV+V NR A DG+ ++ ++ A Sbjct: 197 TVDVV---GIAATAYDHWDSRAGDPQLHTHVVVSNRARSATDGKWRTLYSRQVHGSVVAL 253 Query: 222 GVIYQATLRRELHQSLGFEWLPVDPATGMA---EVAGIAPESVTAWSQRSSQLREWAAGN 278 Y A L L + G W D G + E+AG+ + +S R+ + AA Sbjct: 254 SEHYNAVLADRLTGTFGVGWEHRDRGKGRSRAFEIAGVPDGLIDEFSSRTRHID--AAAQ 311 Query: 279 LALAD-----GQNLSPAQLSA----AQKATRPAKPEQLSFAELRAAWRA----------- 318 +A+ G+ S A S A ATRP K E S A+L A WRA Sbjct: 312 QLVAEYVARHGKRPSGATYSKLRAQATLATRPPK-ELYSLADLTAGWRARAARLLGRDPV 370 Query: 319 ----------DERGVRLDDXXXXXXXXXXXEGSRQPFDRRRL-------AAAAEQIDKAG 361 ER R D RR A A+ Q Sbjct: 371 AWAHGLTHTPGERVWRAGDIPESSVEQVAASVLADVSARRSTWRHWNLWAEASRQTMGWR 430 Query: 362 FTRADLVEIVGAQLPVDTEQSPRRLVEAAVEEIGILLTAA------RQPHQREGHDRFTL 415 F A+ E V ++ + + L A + A R PH R TL Sbjct: 431 FASAEDREAVVGRIVDQAKHASVALTPAEAAPTPTAMRRADGVSFFRPPHATVFSSRETL 490 Query: 416 DRILAEEAALLQLVDAQDIRAELW------VKERDTEGLSPDQKRVVENIATSPWLVQPL 469 D AE+ L D A + VK D LS +Q+ +E +A+S V L Sbjct: 491 D---AEDRLLTLATDRTAPHASVRAVEAAVVKRYDDVALSAEQQAALEAVASSGRRVDLL 547 Query: 470 SAPAGAGKTTSLRALATMARRRH-TARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHEL 528 PAG GKTT+++AL +H V LAP+ A V + E G AK LHE Sbjct: 548 VGPAGTGKTTAMQALLRAWTAQHGKGSVAGLAPSAAAAQV-LAEDLGIATENTAKWLHER 606 Query: 529 DKGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFA 588 +G T LV+VDEA + K +LVGD QL V+A GG FA Sbjct: 607 ARGRATFQRGQLVIVDEATLADTSTLLAIANHAQVAGAKVLLVGDWAQLQSVEA-GGAFA 665 Query: 589 QLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXX 648 L +L E+ R E+ ASLALR G A++ Y +H RL G Sbjct: 666 LLADARDDVAELGEIHRFTHAWEKPASLALRTGDTT----AIDAYESHARLRGGTTEEML 721 Query: 649 XXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRD-IIAADQPA---VIAARGHRIAV 704 + D A G+ LL+ D+T ALN R + II D V A G +V Sbjct: 722 DAAYAAWRADHADGKATLLVTDSTATVQALNARARAERIIDGDTSTGRTVALADGLSASV 781 Query: 705 GDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVA-----ARRLHDGA 759 GD +I+RRN L T ++ G VRNG+RW++ V + +A A + GA Sbjct: 782 GDHLITRRNARRL-----TTLRGGW--VRNGDRWKVLDVRRNGSVLAGAMDQAGKQRRGA 834 Query: 760 RAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYL 819 Y+ EH+ GYA+T H AQG+T DT H V+ TTR LYV+MTRGR +N AY+ Sbjct: 835 TVVLPPSYVAEHVELGYAVTAHRAQGMTVDTAHVVVAGGTTRENLYVSMTRGRESNIAYV 894 >tr|D0LFJ6|D0LFJ6_GORB4 Tax_Id=526226 SubName: Full=TrwC relaxase;[Gordonia bronchialis] Length = 2090 Score = 238 bits (607), Expect = 3e-60 Identities = 251/873 (28%), Positives = 352/873 (40%), Gaps = 142/873 (16%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+D+TF KSVS + A+ D+ + ++ A Y+R+ Sbjct: 223 VAGYDMTFSPVKSVSTLWAIAPIDMASTIEDAHRAAVSDA-IAFIEREACYSRLGTNGVA 281 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPN----RQARADGQLVSIDGTSLYHEA 218 + D GL+A A+ H SRAGDP LHTHV + N R A + +++DG LY Sbjct: 282 QVDT---DGLIAAAFTHRDSRAGDPDLHTHVAISNKVRVRDAAGIARWMALDGRPLYKAT 338 Query: 219 KAAGVIYQATLRRELHQSLGFEWL----PVDPATGMAEVAGIAPESVTAWSQRSSQLREW 274 +A +Y + L LHQSLG + P + E+ GI + + WS R + Sbjct: 339 VSASEVYNSRLELYLHQSLGVTFSERAQPDLRKRAVREIDGIPTDLMQRWSSRREAIEAR 398 Query: 275 AA---GNLALADGQNLSPAQ-LSAAQKAT---RPAKPEQLSFAELRAAWRAD-------- 319 A G+ + + AQ+AT R K E S+AE R WRA+ Sbjct: 399 VAELSAQFHTDHGREPTTGEAFDLAQQATLDTREKKHEPRSYAEQRRTWRAEAEQVLGGE 458 Query: 320 ------------------ERGVRLD---DXXXXXXXXXXXEGSRQPFDRRRLAAAAE-QI 357 RG LD +R + R L A AE Q+ Sbjct: 459 SGLKGVIADAAVGRPVRPHRGTELDLDTCQEVASDIITVVSATRARWQRPHLRAEAERQL 518 Query: 358 DKAGFTRADLVEIVGAQLP--VDTEQSPRRLVEAAVEEIGILLTAARQPH---------- 405 F D + A + VDT S V A +++ A +PH Sbjct: 519 RDRDFAGLDDPATISAAVEQIVDTALSSSDSVRVAGDDLD---GALNEPHVLRRANGESV 575 Query: 406 -QREGHDRFTLDRILAEEAALL--------QLVDAQDIRAELWVKERDTEGLSPDQKRVV 456 R D T ILA EA ++ + +D + L + + L+ Q +V Sbjct: 576 FTRHDTDLHTSRTILAAEARIVAAARRVDGRTIDGDAVSLALLEQAANGRELNDGQSAMV 635 Query: 457 ENIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGD 516 +ATS VQ + APAG GKTT+LR LA A LAPT A V +RE Sbjct: 636 REMATSGRRVQLVLAPAGTGKTTALRTLAR-AWNDSGGTTVGLAPTAAAAAV-LREELDT 693 Query: 517 VGYTIAKALH---------------------------------ELDKGT--------LTL 535 T AK + EL + + Sbjct: 694 TTDTAAKLVQLVATERLQALAATPRWRTATNPRLARQVRAARAELSRSRPPTIPDWFTAI 753 Query: 536 GHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLP 595 G LVVVDEA + LVGD QLA + A GG+ + + Sbjct: 754 GPNTLVVVDEAGLASTADLDTVIRFVCARGGSVRLVGDDQQLASISA-GGVLRDIAHETG 812 Query: 596 WAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXY 655 A LS+V R DP E ASLALRDG PA A+ +Y R+H + Sbjct: 813 -ALTLSQVVRFSDPAEGAASLALRDGDPA----ALGFYADAGRVHVAADTVAVEQAYTAW 867 Query: 656 NRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAA----RGHRIAVGDLIISR 711 D GR+ +++ T + +ALN R D +AAD A AA G + ++GDLI +R Sbjct: 868 AHDRDTGRDTVMLAATRDTVNALNERARADRLAADPAAPHAAVQLSDGLQASIGDLICTR 927 Query: 712 RNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLREH 771 N L + D VRNG+RW++ A+ + + A+ L G DY+ ++ Sbjct: 928 SNRRDLRL-------SATDWVRNGDRWQVTALG-ADGALTAQHLDTGRLITLPADYVADN 979 Query: 772 ITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGENEHRQ 831 T GYA T+H+AQG+TADT H V + TR LLYVA+TRGR AN YL + Sbjct: 980 TTLGYASTIHAAQGMTADTCHVVGSDALTRQLLYVALTRGRHANHIYLATAETDPHNATT 1039 Query: 832 PNGVHIPRRG-------TAKEAAQRARTIIANQ 857 P H P G ++ AQ++ T A + Sbjct: 1040 PKARH-PNTGLETLAAILERDGAQQSATTAARE 1071 >tr|C7NLP0|C7NLP0_KYTSD Tax_Id=478801 SubName: Full=TrwC relaxase;[Kytococcus sedentarius] Length = 1184 Score = 234 bits (596), Expect = 5e-59 Identities = 238/804 (29%), Positives = 337/804 (41%), Gaps = 104/804 (12%) Query: 101 RGVHGFDLTFCAPKSVSLIRALR-AGD---VXXXXXXXXXXXXXXXXLEYLAAHAGYTRV 156 R V GFD TF PKS S + A+ AG + E A G T Sbjct: 137 RAVAGFDFTFSVPKSASALWAVADAGTQALIGEAHHAAVAEVVAFMEREVAATRTGATAG 196 Query: 157 HNPVTGEKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNR-QARADGQLVSIDGTSLY 215 V + + G VA A+ H SRAGDPHLHTHV++ N+ Q DG+ S+DG ++ Sbjct: 197 DGAVAQ----VDVTGFVATAFDHFDSRAGDPHLHTHVVISNKVQTAFDGKWRSLDGRPMH 252 Query: 216 HEAKAAGVIYQATLRRELHQSLGFEWLPVDPATGMAE---VAGIAPESVTAWSQRSSQLR 272 A +++A + ++ G EW D ++ + E V +S R+ + Sbjct: 253 AAVVALSELHEAVFADHMTRTFGVEWEARDMGRDRNPAWAISTVPEELVQEFSTRARHID 312 Query: 273 EWAAGNLALAD-----GQNLSPAQL----SAAQKATRPAKPEQLSFAELRAAWRADERGV 323 A N +A+ G+ S A + + A ATRP K + S A+L + WR GV Sbjct: 313 --AEKNRLIAEYVARHGRQPSTATIIKLRAQATLATRPEKAVR-SLADLTSDWRTRATGV 369 Query: 324 RLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQIDKAGFTRADLVEIVGAQ--------- 374 D + QP R + I + G T +VE+VG + Sbjct: 370 LGQDATGWARTITDND---QPLLLRADDVPLDAIGELGQT---VVEVVGEKRSTWRRWNL 423 Query: 375 -------------LPVDTEQSPRRLVEAAVEEIGILLTA---ARQPHQ----------RE 408 + ++ +V A E+ + LT A P R Sbjct: 424 MAEASRQTMGWRFATMHDREAVVAMVADAAEQASLRLTPPDLATSPATFRRGDGTSVFRP 483 Query: 409 GHDR-FTLDRILAEEAALL---QLVDAQDI---RAELWVKERDTEG--LSPDQKRVVENI 459 H F+ + +LA E LL + + A + E + D EG L DQ V+ I Sbjct: 484 KHSTVFSSELLLAAEERLLDRSRTLTAPTVPVTTVEKITNKPDHEGRMLGEDQTDVLMKI 543 Query: 460 ATSPWLVQPLSAPAGAGKTTSLRALATMARRRH-TARVFVLAPTGTAVDVAIREGAGDVG 518 A S ++ L PAGAGKTT++ AL + H + V LAP+ A V A D+G Sbjct: 544 AVSGRMLDVLVGPAGAGKTTAMSALRRAWEKEHGSGSVVGLAPSAVAAQVL----ADDLG 599 Query: 519 YTIAKAL-----HELDKGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGD 573 H +D G L V++DEA++ G K +LVGD Sbjct: 600 IRCENTAKWWQNHLIDGTDFEAGQL--VIIDEASLAGTLSLDRITHLAERAGAKVLLVGD 657 Query: 574 AHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWY 633 QL V A GG F L D A +L +V R E+TASLALR G + ++ Y Sbjct: 658 YGQLQSVDA-GGAFGLLVGDRNEAPELVDVHRFTHEWEKTASLALRHGRT----QVIDTY 712 Query: 634 RTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIA----A 689 HDR+H G+ + D G ++L+ +T + ALN+R D+I Sbjct: 713 LDHDRIHEGEAEAMTDAAYTAWRTDRDRGLVSVLVAETRDDVSALNQRARADLILDGTLT 772 Query: 690 DQPAVIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAV-DPGNN 748 V G +GD II+RRND L + G D VRNG+ W I V D G+ Sbjct: 773 PGQEVELTDGTTAGIGDTIITRRNDRRL--------RNGKDWVRNGDTWTITGVRDDGSV 824 Query: 749 RVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAM 808 + G Y+ +H+ GYAIT H AQGVT DT H ++ TTR YVAM Sbjct: 825 TIRKTGRRFGGTIVLPTTYVADHVDLGYAITAHRAQGVTVDTAHVLVEPTTTRENFYVAM 884 Query: 809 TRGRSANTAYLHERIAGENEHRQP 832 TRG+ +N AY+ A E+ + P Sbjct: 885 TRGKHSNRAYVILDRADEHAYPHP 908 >tr|Q5U9L8|Q5U9L8_NOCSJ Tax_Id=196162 SubName: Full=Putative TraA conjugation protein;[Nocardioides sp.] Length = 1818 Score = 231 bits (588), Expect = 5e-58 Identities = 244/819 (29%), Positives = 339/819 (41%), Gaps = 137/819 (16%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KSVS + AL A L ++ A +TR T Sbjct: 197 VAGYDLTFSPVKSVSTLWAL-ADPKTAAVIEGAHQSAIKDALNFIETKALFTRQG---TN 252 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 + + GL+A A+ H SRAGDP LHTHV V N+ DG+ ++IDG LY +A Sbjct: 253 GIRQVNVRGLLATAFTHRDSRAGDPDLHTHVAVANKVQTLDGKWLAIDGRLLYKAKVSAS 312 Query: 223 VIYQATLRRELHQSLGFEWLPVDPATGMAEVAGIAPESVTAWSQRSSQ------------ 270 Y L R L +LG G AE PE+ A +R S Sbjct: 313 ETYNTALERHLGDALG------GTVRGTAESR--RPEAAGARDRRLSYPDLNHRFLQAPR 364 Query: 271 ------LREWAAGNLALADGQNLSPAQLSAAQKAT---RPAKPEQLSFAELRAAWRADE- 320 R W + + L AQ+AT R AK E S + R AW + Sbjct: 365 SASKPAARSWPPSSRRPTAARRHRIETLQLAQRATLETREAKHEPRSLNDQREAWDREAV 424 Query: 321 ------RGVR----------------LDDXXXXXXXXXXX----EGSRQPFDRRRLAAAA 354 RG++ + D EG R + + A A Sbjct: 425 EVLGSPRGLQQMLHGTLNPTAAGTAPVADAAWFAKTGDRIVTTMEGGRATWQYWHVYAEA 484 Query: 355 EQIDKAGFTRADLVEIVGAQL--------------PVDTEQSP---RRLVEAAVEEIGIL 397 ++ +A D V V L P D P R+L A+V +G Sbjct: 485 QRQVRAANVPTDQVSTVVGLLVSEVLDGRSVSITRPFDEISEPPELRKLDGASVYTVG-- 542 Query: 398 LTAARQPHQREGHDRFTLDRILAEEAALLQL--------VDAQDIRAELWVKERDTEGLS 449 G FT ++LA E L++ VD Q++ L E + L+ Sbjct: 543 -----------GVHLFTSSKVLAAEERLVEAAGRRDGYAVDEQNVALALLESEANGVTLN 591 Query: 450 PDQKRVVENIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVA 509 Q +V+ +ATS +Q APAG+GKTT++RALA A V LAP+ A D A Sbjct: 592 AGQATLVKEMATSGARLQLAIAPAGSGKTTAMRALA-QAWTDGGGSVIGLAPSAAAAD-A 649 Query: 510 IREGAGDV----GYTIAKALHELDKGTLT----------LGHLDLVVVDEAAMVGXXXXX 555 +R G T+AK H L++ +T +G LVV+DEA M Sbjct: 650 LRVSMGSQIDTQTDTLAKLTHSLEQSQVTGAEVPDWVAGIGPQTLVVIDEAGMADTLSLD 709 Query: 556 XXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTAS 615 LVGD QLA + A GG+ + A A QL+E+ R DP E AS Sbjct: 710 IAVQHVLERGGSVRLVGDDQQLAAIGA-GGVLRDIRAT-HGALQLTELVRFTDPAEGAAS 767 Query: 616 LALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMA 675 LALR+G A+ +Y DR+H GD + D AAG +A+++ T E+ Sbjct: 768 LALREGKG----EALGFYLDRDRVHVGDLATMTEDVFAAWQADRAAGLDAIMLAPTRELV 823 Query: 676 DALNR--RIHRDIIAADQPAVIAAR----GHRIAVGDLIISRRNDPTLPVFDATDIKKGA 729 LN+ R HR + AD +V AR G+ ++G+LII+R ND L Sbjct: 824 SELNQQARAHR-LEGADPASVGPARRLADGNEASIGELIITRTNDRKLRT-------SAT 875 Query: 730 DPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTAD 789 D V+NG+RW + + G + H G +Y+ GYA TVH+AQGVT D Sbjct: 876 DWVKNGDRWTVLGLHEGGDLTVQHTQH-GRTVRLPREYVETSTELGYACTVHTAQGVTTD 934 Query: 790 TTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGENE 828 T H + N +R LY +TRG+S N YL ++ G+ + Sbjct: 935 TMHGLATGNESRQQLYTMLTRGKSGNHIYL--QVVGDGD 971 >tr|C5C807|C5C807_MICLC Tax_Id=465515 SubName: Full=Conjugative relaxase domain protein, TrwC/TraI family;[Micrococcus luteus] Length = 1174 Score = 229 bits (583), Expect = 2e-57 Identities = 243/838 (28%), Positives = 334/838 (39%), Gaps = 128/838 (15%) Query: 84 LDDGTAPNGASGRAFGN-----------RGVHGFDLTFCAPKSVSLIRALRAGD----VX 128 LD G +P GA G+A R V GFD TF PKS S + A+ + Sbjct: 102 LDPGLSP-GAKGQAVAQIEVEETERGRRRAVAGFDFTFSIPKSASALWAVADSGTQALIG 160 Query: 129 XXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQHETSRAGDPH 188 E A +G T V + + GLVA A+ H SRAGDPH Sbjct: 161 KAHHAAVAEVVAFMEREVAATRSGATAGDGAVAQ----VDVTGLVATAFDHFDSRAGDPH 216 Query: 189 LHTHVIVPNR-QARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFEWLPVDPA 247 LHTHV++ N+ Q DG+ S+DG ++ A +++A + ++ G W D Sbjct: 217 LHTHVVISNKVQTAFDGRWRSLDGRPMHAAVVALSELHEAVFADHMTRTFGVAWEARDMG 276 Query: 248 TGMAE---VAGIAPESVTAWSQRSSQL---REWAAGNLALADGQNLSPAQL----SAAQK 297 ++ + E V +S R+ + ++ G+ S A + + A Sbjct: 277 RDRNPAWAISSVPEELVAEFSTRARHIDAEKDRLIAEYVAKHGRQPSTATIIKLRAQATL 336 Query: 298 ATRPAKPEQLSFAELRAAWRADERGVR--------------------------LDDXXXX 331 ATRP K E S AEL A WR GV LD Sbjct: 337 ATRPEK-EVRSLAELTAEWRTRASGVLGQDTTAWASAATDNDKPLLLRADDVPLDAIGEL 395 Query: 332 XXXXXXXEGSRQPFDRR--------------RLAAAAEQIDKAGFTRADLVEIVGAQL-P 376 G R+ RR R A ++ G AD E V +L P Sbjct: 396 GRTVVGVVGERRSTWRRWNLMAEASRQTMGWRFATMQDREAVVGMV-ADAAEAVSLRLTP 454 Query: 377 VDTEQSP---RRL--------VEAAVEEIGILLTAARQPHQREGHDRFTLDRILAEEAAL 425 D SP RR+ + V +LL A DR LDR Sbjct: 455 PDFATSPVAFRRVDGTSVFRPKHSTVFSSELLLAA---------EDRL-LDRSRTATGPT 504 Query: 426 LQLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAGKTTSLRALA 485 + L + + E +R+ L DQ + +A S ++ L PAGAGKTT++ AL Sbjct: 505 VPLATVEKVTTE---PDREGRMLGEDQADALMKVAVSGRMLDVLVGPAGAGKTTAMSALR 561 Query: 486 TMARRRH-TARVFVLAPTGTAVDVAIREGAGDVGYTIAKAL-----HELDKGTLTLGHLD 539 + H V LAP+ A V A D+G H + G L Sbjct: 562 RAWEKEHGEGSVVGLAPSAVAAQVL----ADDLGIATENTAKWWQDHLIHGENFRAGQL- 616 Query: 540 LVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQ 599 V++DEA++ G K +LVGD QL V A G F L D A + Sbjct: 617 -VIIDEASLAGTLSLDRITHLAERAGAKVLLVGDYAQLQSVDA-GDAFGLLVGDRDDAPE 674 Query: 600 LSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDT 659 L +V R E+TASLALR G + ++ Y HDR+ GD + D Sbjct: 675 LVDVHRFTHEWEKTASLALRHGRT----QVIDAYLDHDRIRDGDAEAMTDAAYTAWRADR 730 Query: 660 AAGRNALLICDTTEMADALNRRIHRDIIAAD--QPA--VIAARGHRIAVGDLIISRRNDP 715 + G ++L+ +T + ALN+R D+I +P V G VGD II+RRND Sbjct: 731 SQGLVSVLVAETRDDVSALNQRARADLILDGTLRPGREVELNDGVTAGVGDTIITRRNDR 790 Query: 716 TLPVFDATDIKKGADPVRNGNRWRIYAV-DPGNNRVAARRLHDGARAAFTGDYLREHITY 774 L + G D VRNG+ W + V D G+ + G Y+ +H+ Sbjct: 791 RL--------RNGKDWVRNGDAWTVTGVRDDGSVTIRKAGRRFGGSLVLPTAYVTDHVDL 842 Query: 775 GYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGENEHRQP 832 GYAIT H AQGVT DT H ++ TTR YVAMTRG+ AN AY+ E+ H P Sbjct: 843 GYAITAHRAQGVTVDTAHVLVEPTTTRENFYVAMTRGKHANRAYVILDRPDEHAHPHP 900 >tr|A4T240|A4T240_MYCGI Tax_Id=350054 SubName: Full=ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein;[Mycobacterium gilvum] Length = 1955 Score = 225 bits (574), Expect = 2e-56 Identities = 241/835 (28%), Positives = 335/835 (40%), Gaps = 100/835 (11%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KSVS + A+ V LE+L A +TR Sbjct: 201 VAGYDLTFSPVKSVSALWAIAPLPVAEQIEAAHDAAVADV-LEWLQEQAAFTRTGAGGVA 259 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLV----SIDGTSLYHEA 218 + D GL+A + H SRAGDP LHTHV + N+ + D V ++DG L+ Sbjct: 260 QVDT---EGLIAAVFTHRDSRAGDPDLHTHVAISNKVSYVDANGVRRWLALDGQPLHRVT 316 Query: 219 KAAGVIYQATLRRELHQSLGFEWLPVDPATG---MAEVAGIAPESVTAWSQRSSQLREWA 275 AA +Y L L LG + G + E+ G++ + WS R + ++ Sbjct: 317 VAASELYNTRLEAHLIARLGVRFAEQSRGRGKRPVREIVGMSARLMERWSSRRAAIKART 376 Query: 276 AG---NLALADGQNLSPAQLSA-AQKAT---RPAKPEQLSFAELRAAWRAD------ERG 322 A G+ + ++ A AQ AT R AK E S E R WR ERG Sbjct: 377 AELAKQFQADHGREPTNVEIIALAQHATLESREAKHEPRSLGEQRQEWRTQAVEVLGERG 436 Query: 323 VRLDDXXXXXXXXXXXEG---------------------SRQPFDRRRLAAAAEQIDKAG 361 V E SR + R + A A ++ + Sbjct: 437 VNQMLSDTLAAPQTTREAVTIDEEWFASRAGELIATVAESRSTWQRHHVRAEALRMARGH 496 Query: 362 FTRAD--LVEIVGAQLPVDTEQSPRRLVEAAV--EEIGILLTAARQPHQREGHDRFTLDR 417 D LVE + + P VE A E + + ++R G +T Sbjct: 497 DVAHDVALVERLTDTALGEGFSVPHARVEDAELGEPVALRRRDGASVYRRHGVALYTSQE 556 Query: 418 ILAEEAALLQLVDAQDIRA------ELWVKERDTEG--LSPDQKRVVENIATSPWLVQPL 469 LA E +L V D R E+ + + G L+P Q +V +AT+ V Sbjct: 557 TLAAEQRILDAVHRGDGRVASAADVEMALADSTARGRTLNPGQAALVTEMATAGRRVALA 616 Query: 470 SAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELD 529 APAG GKTT++ ALA A R V LAPT A + + E G T+ K + D Sbjct: 617 LAPAGTGKTTAMAALAH-AWRSSGGHVIGLAPTADAA-IVLGEDLGATTDTLDKYVWSAD 674 Query: 530 KGTLTLGHLD----------LVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAP 579 H+ L+VVDEA LVGD QL+ Sbjct: 675 PAKAATSHVPDWFSRVGPDTLIVVDEAGKAATAGLDAMIRDALKKGASVRLVGDDGQLSS 734 Query: 580 VKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRL 639 + A GG+ + A+ A LSEV R + P E A LAL D PA + +Y H R+ Sbjct: 735 ISA-GGILRDI-AEATDALTLSEVVRFKSPAEAAAGLALHDADPA----GIGFYIDHHRI 788 Query: 640 HTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAAD-----QPAV 694 H G + D AAG +++L+ T ++ + LN R D +AAD P V Sbjct: 789 HVGTDETAADMAYQAWRADLAAGGDSILLAPTNDVINELNARARIDRLAADPEAAKSPTV 848 Query: 695 IAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARR 754 + A +VGD I +R+N+ + + D VRNG R+ I V + V AR Sbjct: 849 VLAEQLHASVGDTIRTRKNNRRIGI-------GRNDFVRNGYRYTITEV-LADGGVKARH 900 Query: 755 LHDGARAAFTGDYLREHITYGYAITVHSAQGVTA------DTTHAVLGENTTRALLYVAM 808 L G DY+ EH+T GYA T+ SAQG+T+ T H V + TR LYVA+ Sbjct: 901 LRSGRIVTLPADYIAEHVTLGYAATIDSAQGLTSGSRDTRGTCHIVGSDMLTRQHLYVAL 960 Query: 809 TRGRSANTAYLHERIAGENEHRQPNGVH------IPRRGTAKEAAQRARTIIANQ 857 TRG N YL + P H + R A+ AQ + T A Q Sbjct: 961 TRGTDENHLYLSTAEGDPHRLLSPKATHPDTAVDVLTRILARNGAQVSATTAARQ 1015 >tr|Q70K35|Q70K35_9ACTO Tax_Id=158898 SubName: Full=Putative TraA protein;[Gordonia westfalica] Length = 2072 Score = 224 bits (571), Expect = 4e-56 Identities = 253/858 (29%), Positives = 347/858 (40%), Gaps = 133/858 (15%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+D+TF KSVS + A+ A L ++ A +R+ Sbjct: 204 VAGYDMTFSPVKSVSALWAV-APLPMAEKIEAAHRQAVADALAFIEREACLSRLGTDGIA 262 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPN----RQARADGQLVSIDGTSLYHEA 218 + D GL+A A+ H SRAGDP LHTHV + N R A + +++DGT L+ Sbjct: 263 QVDT---DGLIAAAFTHRDSRAGDPDLHTHVAISNKVRVRDAAGITRWMALDGTPLFKAT 319 Query: 219 KAAGVIYQATLRRELHQSLGFEWLPVDPAT----GMAEVAGIAPESVTAWSQRSSQLREW 274 +A +Y + + L + LG + A + E+ G++ E + WS R + + E Sbjct: 320 VSASEVYNSRIELYLQRDLGVSFSERFSADVRKRPVREIDGVSAELMARWSSRRAAIEER 379 Query: 275 A--AGNLALAD-GQNLSPAQ-LSAAQKAT---RPAKPEQLSFAELRAAWRADERGVRLDD 327 LAD G+ + + AQ+AT R AK E S+AE R AWRAD R + D Sbjct: 380 IDELSKQFLADHGREPTTGEAFDLAQQATLDTREAKHEPRSYAEQRQAWRADARRILGGD 439 Query: 328 XXXXXXXXXXXE----------------------------GSRQPFDRRRLAAAAEQI-- 357 +R + R L A AE+ Sbjct: 440 RAISDLVHEATHPRPRTREHPEFTDELCTELAANCIENISATRARWQRPHLRAEAERQLR 499 Query: 358 --DKAGFTRAD-----LVEIVGAQLPVDTEQSPRR-LVEAAVEEIGILLTA-ARQPHQRE 408 D AG T D + IV L DT + ++ + E +L A R Sbjct: 500 ARDFAGITDTDELAAAVERIVDTALAADTSVAVSSDALDGDLNEPEVLRRANGESVFVRH 559 Query: 409 GHDRFTLDRILAEEAALLQLVDAQDIR------AELWVKERDTEG--LSPDQKRVVENIA 460 T ILA E ++ D R ++ + E+ G L+ Q +V +A Sbjct: 560 DVALHTSTDILAAEHRIVAAAKRTDGRRLDETTVDIALLEQAANGRELNAGQAAMVRELA 619 Query: 461 TSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDV------------ 508 TS VQ + APAG GKTT++R LA A + LAPT A V Sbjct: 620 TSGRRVQLVLAPAGTGKTTAMRTLAR-AWTDSGGTLIGLAPTAAAAAVLRDELDTTTDTA 678 Query: 509 --------AIRE----------------GAGDVGYTIAKALHELDKGT---LTL------ 535 A RE G ++ +A A L T LTL Sbjct: 679 AKLVQLATAERELAQTRALAATPRWRTIGKPELANKVAAAKKTLADPTYQNLTLPDWYTQ 738 Query: 536 -GHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADL 594 G LVVVDEA M LVGD QLA + A GG+ + + Sbjct: 739 IGPDTLVVVDEAGMASTSDLDEVIRCVAARGGSVRLVGDDQQLASISA-GGVLRDVAHET 797 Query: 595 PWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXX 654 A LS+V R D E ASLALRDG PA A+ +Y H R+H Sbjct: 798 G-ALTLSQVVRFSDAAEGAASLALRDGDPA----ALGFYADHGRIHVESDAAAADDAYRA 852 Query: 655 YNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIAAR-----GHRIAVGDLII 709 + RD A GR+ ++I T + +ALN R D +AA P + G +VGD+I Sbjct: 853 WARDRAQGRDTVMIAATRDTVNALNERARADRLAAIDPHLHGPELRLSDGLSASVGDIIS 912 Query: 710 SRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLR 769 +R N L V D VRNG+RWR+ + + + A+ L DY+ Sbjct: 913 TRSNRRDLRV-------SATDWVRNGDRWRVTHIG-ADGTLTAQHLDLNRHVQLPADYVA 964 Query: 770 EHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIAGENEH 829 EH T GYA T+H+AQG+TADT H + + R LLYVAMTRGR N YL + Sbjct: 965 EHTTLGYASTIHAAQGMTADTCHVIGSDALDRQLLYVAMTRGRHGNHIYLPTTETDPHNA 1024 Query: 830 RQPNGVHIPRRGTAKEAA 847 P H P+ G AA Sbjct: 1025 TTPKARH-PQTGLETLAA 1041 >tr|Q1BC42|Q1BC42_MYCSS Tax_Id=164756 SubName: Full=ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein;[Mycobacterium sp.] Length = 1523 Score = 224 bits (570), Expect = 6e-56 Identities = 238/834 (28%), Positives = 339/834 (40%), Gaps = 100/834 (11%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KS+S + A+ +V LE+L +A +TR Sbjct: 205 VAGYDLTFSPVKSISALWAIAPPEVSEQIEAAHEAAVAEV-LEWLQDNAAFTRTGTNGVA 263 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLV----SIDGTSLYHEA 218 + D GL+A + H SRAGDP LHTHV + N+ + D V ++DG L+ Sbjct: 264 QVDT---QGLIAAVFTHRDSRAGDPDLHTHVAISNKVSYLDHNGVRRWLALDGQPLHRVI 320 Query: 219 KAAGVIYQATLRRELHQSLGFEWLPVDPATG---MAEVAGIAPESVTAWSQRSSQLREWA 275 AA +Y + LG ++ G + E+ G++ E +T WS R + ++ Sbjct: 321 VAASEMYNTRMEAHTIDRLGVDFAETSRGRGKRTVREIVGMSTELMTRWSSRRTAIKART 380 Query: 276 AGNLALA-----DGQNLSPAQLSAAQKAT---RPAKPEQLSFAELRAAWRADERGVR--- 324 A LA A + + L+ AQ+AT R AK E S AE R WR V Sbjct: 381 A-ELAKAFQHDHGREPTTIESLALAQQATLESREAKHEPRSLAEQRDTWRHQAVEVLGHD 439 Query: 325 -LDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQIDKAGFTRA---------DLVEIVGAQ 374 +D + + D A A I +RA + + +V + Sbjct: 440 GVDRMLANVLTPERGHTTPEITDEWVAAQAGALIATVSESRATWQRHHVHAEALRVVRNE 499 Query: 375 LPVDTEQSPRRLVEAAVEE-----------------IGILLTAARQPHQREGHDRFTLDR 417 Q RL + A+ E + + + + R G +T Sbjct: 500 GVARVSQLVERLTDTALSEAFSVPHARTADAELGEPVALRRSDGSSVYSRHGTATYTSRD 559 Query: 418 ILAEEAALL--------QLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPL 469 IL E +L ++ A D+R L + L+ Q +V +A V Sbjct: 560 ILTAERRILAAAHQLDGRVAAATDVRLALADAAAHGKNLNDGQAALVAQMALGGRRVGLA 619 Query: 470 SAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELD 529 APAGAGKTT++ ALA A R +V LAPT A + + E G T+ K +H D Sbjct: 620 LAPAGAGKTTAMAALAH-AWRSSGGQVLGLAPTAAAA-IVLGEDLGATTDTLEKYVHCTD 677 Query: 530 KGTLTL----------GHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAP 579 + + G L+VVDEA M LVGD QLA Sbjct: 678 ENNAAIYGTPDWFTQVGPDTLIVVDEAGMASTPGLDALITHALSAGASVRLVGDDAQLAS 737 Query: 580 VKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRL 639 + A GG+ + D A LSEV R E ASLALR G PA + +Y R+ Sbjct: 738 ISA-GGVLRDIATDTG-ALTLSEVVRFHSRAEAAASLALRGGDPA----GIGFYLDAGRI 791 Query: 640 HTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPA------ 693 H G + D AGR++LL+ T + + LN R +AA A Sbjct: 792 HIGTEQTSADAAFTAWQADQDAGRDSLLLAPTNAIVNELNVRARTARLAAALEADPQATP 851 Query: 694 ---VIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRV 750 + G +VGD+I +RRN+ LP+ G D VRNG + I + + + Sbjct: 852 GRETTLSDGLTASVGDVIRTRRNNRQLPL-------SGTDYVRNGYTFTIVDIAT-DGAL 903 Query: 751 AARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTA-DTTHAVLGENTTRALLYVAMT 809 AR G DY+ +H+T GYA T+ +AQG TA H V E+ TR LYVA+T Sbjct: 904 TARHRGTGREITLPTDYVTDHVTLGYATTIDAAQGSTAGHACHVVGAEHLTRQHLYVALT 963 Query: 810 RGRSANTAYLH------ERIAGENEHRQPNGVHIPRRGTAKEAAQRARTIIANQ 857 RGR+ N YL RI V + R A++ AQ + T A Q Sbjct: 964 RGRAENHLYLSTAETDPHRILAPKATHPDTAVDVLSRIVARDGAQVSATTAARQ 1017 >tr|A1UCV2|A1UCV2_MYCSK Tax_Id=189918 SubName: Full=ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein;[Mycobacterium sp.] Length = 1523 Score = 224 bits (570), Expect = 6e-56 Identities = 238/834 (28%), Positives = 339/834 (40%), Gaps = 100/834 (11%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KS+S + A+ +V LE+L +A +TR Sbjct: 205 VAGYDLTFSPVKSISALWAIAPPEVSEQIEAAHEAAVAEV-LEWLQDNAAFTRTGTNGVA 263 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLV----SIDGTSLYHEA 218 + D GL+A + H SRAGDP LHTHV + N+ + D V ++DG L+ Sbjct: 264 QVDT---QGLIAAVFTHRDSRAGDPDLHTHVAISNKVSYLDHNGVRRWLALDGQPLHRVI 320 Query: 219 KAAGVIYQATLRRELHQSLGFEWLPVDPATG---MAEVAGIAPESVTAWSQRSSQLREWA 275 AA +Y + LG ++ G + E+ G++ E +T WS R + ++ Sbjct: 321 VAASEMYNTRMEAHTIDRLGVDFAETSRGRGKRTVREIVGMSTELMTRWSSRRTAIKART 380 Query: 276 AGNLALA-----DGQNLSPAQLSAAQKAT---RPAKPEQLSFAELRAAWRADERGVR--- 324 A LA A + + L+ AQ+AT R AK E S AE R WR V Sbjct: 381 A-ELAKAFQHDHGREPTTIESLALAQQATLESREAKHEPRSLAEQRDTWRHQAVEVLGHD 439 Query: 325 -LDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQIDKAGFTRA---------DLVEIVGAQ 374 +D + + D A A I +RA + + +V + Sbjct: 440 GVDRMLANVLTPERGHTTPEITDEWVAAQAGALIATVSESRATWQRHHVHAEALRVVRNE 499 Query: 375 LPVDTEQSPRRLVEAAVEE-----------------IGILLTAARQPHQREGHDRFTLDR 417 Q RL + A+ E + + + + R G +T Sbjct: 500 GVARVSQLVERLTDTALSEAFSVPHARTADAELGEPVALRRSDGSSVYSRHGTATYTSRD 559 Query: 418 ILAEEAALL--------QLVDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPL 469 IL E +L ++ A D+R L + L+ Q +V +A V Sbjct: 560 ILTAERRILAAAHQLDGRVAAATDVRLALADAAAHGKNLNDGQAALVAQMALGGRRVGLA 619 Query: 470 SAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELD 529 APAGAGKTT++ ALA A R +V LAPT A + + E G T+ K +H D Sbjct: 620 LAPAGAGKTTAMAALAH-AWRSSGGQVLGLAPTAAAA-IVLGEDLGATTDTLEKYVHCTD 677 Query: 530 KGTLTL----------GHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAP 579 + + G L+VVDEA M LVGD QLA Sbjct: 678 ENNAAIYGTPDWFTQVGPDTLIVVDEAGMASTPGLDALITHALSAGASVRLVGDDAQLAS 737 Query: 580 VKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRL 639 + A GG+ + D A LSEV R E ASLALR G PA + +Y R+ Sbjct: 738 ISA-GGVLRDIATDTG-ALTLSEVVRFHSRAEAAASLALRGGDPA----GIGFYLDAGRI 791 Query: 640 HTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPA------ 693 H G + D AGR++LL+ T + + LN R +AA A Sbjct: 792 HIGTEQTSADAAFTAWQADQDAGRDSLLLAPTNAIVNELNVRARTARLAAALEADPQATP 851 Query: 694 ---VIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRV 750 + G +VGD+I +RRN+ LP+ G D VRNG + I + + + Sbjct: 852 GRETTLSDGLTASVGDVIRTRRNNRQLPL-------SGTDYVRNGYTFTIVDIAT-DGAL 903 Query: 751 AARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTA-DTTHAVLGENTTRALLYVAMT 809 AR G DY+ +H+T GYA T+ +AQG TA H V E+ TR LYVA+T Sbjct: 904 TARHRGTGREITLPTDYVTDHVTLGYATTIDAAQGSTAGHACHVVGAEHLTRQHLYVALT 963 Query: 810 RGRSANTAYLH------ERIAGENEHRQPNGVHIPRRGTAKEAAQRARTIIANQ 857 RGR+ N YL RI V + R A++ AQ + T A Q Sbjct: 964 RGRAENHLYLSTAETDPHRILAPKATHPDTAVDVLSRIVARDGAQVSATTAARQ 1017 >tr|A1TBG6|A1TBG6_MYCVP Tax_Id=350058 SubName: Full=ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like;[Mycobacterium vanbaalenii] Length = 1952 Score = 222 bits (566), Expect = 2e-55 Identities = 239/835 (28%), Positives = 337/835 (40%), Gaps = 100/835 (11%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KSVS + A+ V L++L A +TR Sbjct: 201 VAGYDLTFSPVKSVSALWAIAPLPVSEQIEAAHDAAVADV-LKWLQDQAAFTRTGAGGIA 259 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLV----SIDGTSLYHEA 218 + D GL+A + H SRAGDP LHTHV + N+ + D V ++DG L+ Sbjct: 260 QVDT---EGLIAAVFTHRDSRAGDPDLHTHVAISNKVSYVDANGVRRWLALDGQPLHRVT 316 Query: 219 KAAGVIYQATLRRELHQSLGFEWLPVDPATG---MAEVAGIAPESVTAWSQRSSQLREWA 275 AA +Y L L LG + G + E+ G++ + + WS R + ++ Sbjct: 317 VAASELYNTRLEAHLISRLGVRFAEQSRGRGKRPVREIVGMSAKLMERWSSRRAAIKART 376 Query: 276 AG---NLALADGQNLSPAQLSA-AQKAT---RPAKPEQLSFAELRAAWRAD------ERG 322 A G+ + ++ A AQ+AT R AK E S E R W A ERG Sbjct: 377 AELAKQFQADHGREPTNVEIIALAQQATLESREAKHEPRSLGEQRQEWHAQAVEVLGERG 436 Query: 323 VRLDDXXXXXXXXXXXEG---------------------SRQPFDRRRLAAAAEQIDKAG 361 V E +R + R + A A ++ + Sbjct: 437 VNQILADTLAAPQTTREAVTVDEEWIASRAGELIATVAETRSTWQRHHVCAEALRMARGH 496 Query: 362 FTRAD--LVEIVGAQLPVDTEQSPRRLVEAAV--EEIGILLTAARQPHQREGHDRFTLDR 417 D LVE + P VE A E + + ++R G +T Sbjct: 497 DVAHDVALVERLTDTALGGGFSVPHARVEDAELGEPVALRRRDGASVYRRHGVALYTSQE 556 Query: 418 ILAEEAALLQLVDAQDIRA------ELWVKERDTEG--LSPDQKRVVENIATSPWLVQPL 469 LA E +L V D R E+ + + G L+P Q +V ++AT+ V Sbjct: 557 TLAAEQRILDAVHRGDGRVASAADVEMALADSTARGRTLNPGQAALVTDMATAGRRVALA 616 Query: 470 SAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELD 529 APAG GKTT++ ALA A R V LAPT A + + E G T+ K + D Sbjct: 617 LAPAGTGKTTAMAALAH-AWRSSGGHVIGLAPTADAA-IVLGEDLGATTDTLDKYVWSAD 674 Query: 530 KGTLTLGHLD----------LVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAP 579 ++ L+VVDEA LVGD QL+ Sbjct: 675 LAKAATSYVPDWFSRVGPDTLIVVDEAGKAATAGLDAMIRDALKKGASVRLVGDDGQLSS 734 Query: 580 VKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRL 639 + A GG+ + A+ A LSEV R + P E A LAL D PA + +Y H R+ Sbjct: 735 ISA-GGILRDI-AEATDALTLSEVVRFKSPAEAAAGLALHDADPA----GIGFYIDHHRI 788 Query: 640 HTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQ-----PAV 694 H G + D AAG +++L+ T ++ + LN R D +A D P V Sbjct: 789 HVGTDETAADMAYQAWRADLAAGGDSILLAPTNDVINELNARARLDRLATDPEAAKAPTV 848 Query: 695 IAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARR 754 + A +VGD I +R+N+ + + D VRNG R+ I V P V AR Sbjct: 849 VLADQLHASVGDTIRTRKNNRRITI-------GRNDFVRNGYRYTITEVLPDGG-VKARH 900 Query: 755 LHDGARAAFTGDYLREHITYGYAITVHSAQGVTA------DTTHAVLGENTTRALLYVAM 808 L G DY+ EH+T GYA T+ SAQG+TA T H V + TR LYVA+ Sbjct: 901 LRSGRIVTLPADYIAEHVTLGYAATIDSAQGLTAGGRDTRGTCHIVGSDMLTRQHLYVAL 960 Query: 809 TRGRSANTAYLHERIAGENEHRQPNGVH------IPRRGTAKEAAQRARTIIANQ 857 TRG N YL + P H + R A++ AQ + T A Q Sbjct: 961 TRGTDENHLYLSTAEGDPHRLLSPKATHPDTAVDVLTRILARDGAQVSATTAARQ 1015 >tr|A1TA53|A1TA53_MYCVP Tax_Id=350058 SubName: Full=ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein;[Mycobacterium vanbaalenii] Length = 1529 Score = 221 bits (562), Expect = 5e-55 Identities = 243/834 (29%), Positives = 337/834 (40%), Gaps = 100/834 (11%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KS+S + A+ ++ LE+L A +TR Sbjct: 201 VAGYDLTFSPVKSISALWAIAPPEIAEQIEAAHEAAVADV-LEWLQDKAAFTRTGTNGVA 259 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLV----SIDGTSLYHEA 218 + D GL+A + H SRAGDP LHTHV + N+ + D V ++DG L+ Sbjct: 260 QVDT---EGLIAAVFTHRDSRAGDPDLHTHVAIANKVSYLDQNGVRRWLALDGQPLHRVI 316 Query: 219 KAAGVIYQATLRRELHQSLGFEWLPVDPATG---MAEVAGIAPESVTAWSQRSSQLREWA 275 AA +Y + LG ++ G + E+ G++ E + WS R ++ Sbjct: 317 VAASEMYNTRMEVHTIDRLGVDFAEASRGRGKRPVREIVGMSVELMMRWSSRGIAIKART 376 Query: 276 AGNLA--LADGQNLSPA---QLSAAQKAT---RPAKPEQLSFAELRAAWRA--------D 319 A LA P L+ AQ+AT R AK E SFAE RA WR D Sbjct: 377 A-ELAKQFQHDHGREPTTIESLALAQQATLESREAKHEPRSFAEQRATWRNQAIEVLGHD 435 Query: 320 ERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQID-----KAGFTRADLVEIVGAQ 374 L E + + R +A A + +A RA+ + +V A+ Sbjct: 436 GLNRMLATVLAPRRAQKTPEITAEWVASRAVALVATVAETRATWQAHHVRAEALRMVRAE 495 Query: 375 LPVDTEQSPRRLVEAAVEE-----------------IGILLTAARQPHQREGHDRFTLDR 417 RL + A+ E + + + R G +T Sbjct: 496 GVAHVAGLVERLTDTALSEAFSVPHARVEDGELGEPVALRRRDGSSVYSRHGVATYTSRD 555 Query: 418 ILAEEAALLQLVDAQDIR------AELWVKERDTEG--LSPDQKRVVENIATSPWLVQPL 469 +LA E +L V +D R +L + + G L+ Q +VE +ATS V Sbjct: 556 VLAAEERILAAVARRDGRMATASEVDLALSDSAARGKPLNLGQAALVEQMATSGRRVALA 615 Query: 470 SAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELD 529 APAGAGKTT++ ALA A R V LAPT A + + E G T+ K +H D Sbjct: 616 LAPAGAGKTTAMAALAH-AWRSSGGHVLGLAPTAAAA-IVLGEDLGATTDTLDKYVHCAD 673 Query: 530 KGTLT----------LGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAP 579 +G L++VDEA M LV D QLA Sbjct: 674 PDNAATFGTPQWFTDIGPDTLIIVDEAGMASTAGLDAMIADAQRKGASVRLVADDCQLAS 733 Query: 580 VKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRL 639 + A GG+ + + A LSEV R E ASLALR G PA + +Y R+ Sbjct: 734 ISA-GGVLRDIATETG-ALTLSEVVRFHSRAEAAASLALRGGDPA----GIGFYIDSGRI 787 Query: 640 HTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPA------ 693 H G + D AGR++LL+ T + D LN R IAA A Sbjct: 788 HVGTEQTAADTAFSAWLADRNAGRDSLLLGPTNAIVDDLNARARTARIAAHVEADPNWRP 847 Query: 694 ---VIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRV 750 + A R +VGD+I +R N LP+ G D VRNG + I V + + Sbjct: 848 GRETVLADQLRASVGDVIRTRHNARWLPL-------SGTDYVRNGYTFDILDV-ARDGAL 899 Query: 751 AARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTAD-TTHAVLGENTTRALLYVAMT 809 AR G DY+ EH+T GYA T++ AQG TA + H V E+ TR LYVA+T Sbjct: 900 RARHSGTGHEITLPADYVTEHVTLGYASTINGAQGSTAGYSCHVVGAEHLTRQQLYVALT 959 Query: 810 RGRSANTAYLH------ERIAGENEHRQPNGVHIPRRGTAKEAAQRARTIIANQ 857 RGR+ N YL RI V + R A+ Q + T A Q Sbjct: 960 RGRAENHLYLSTAETDPHRILAPKATHPDTAVDVLSRIVARGGGQVSATTTARQ 1013 >tr|A3TJZ6|A3TJZ6_9MICO Tax_Id=313589 SubName: Full=Transfer protein Tra-like;[Janibacter sp. HTCC2649] Length = 1920 Score = 218 bits (555), Expect = 3e-54 Identities = 233/814 (28%), Positives = 334/814 (41%), Gaps = 84/814 (10%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KS+S + A+ +V L ++ HA YTR Sbjct: 190 VAGYDLTFSPVKSISTLWAVAPREVAAQIELAHHEAVGDA-LAFIEKHALYTREGARGVR 248 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 + D+ G VA A+ H SR+GDP LHTHV V N+ G+ ++IDG L+ A Sbjct: 249 QVDVT---GFVATAFTHRDSRSGDPDLHTHVAVANKVQTLAGKWLAIDGRVLFKANVTAS 305 Query: 223 VIYQATLRRELHQSLGFEWLP---VDPATG-MAEVAGIAPESVTAWSQRSSQLREWAAGN 278 Y + + L LG + D + + EV G+ P WS R + ++ + Sbjct: 306 ETYNTAIEKHLRTRLGLTFTERACTDRSKRPIREVVGVDPRLNERWSTRRASIQARRSEL 365 Query: 279 LALADGQNLSPA----QLSAAQKAT---RPAKPEQLSFAELRAAWRADERGVRLDDXXXX 331 + P + AQ+AT R AK E + E R W + + V Sbjct: 366 ATAFQSDHGRPPTVIESIHLAQQATLETRDAKHEPRTLTEQRTTWAREAQVVLGGPDAVT 425 Query: 332 XXXXXXXEGSRQPFDR-------RRLAAAAEQIDKAGFTRADLVEI-VGAQLPVDTEQSP 383 + P R A+ + G + + + AQ V P Sbjct: 426 AMVTAALSSTTTPATPGVDAAWVRSTASTILDTLQGGRSTWQVWHVRAEAQREVRAVDLP 485 Query: 384 RRLVEAAVEE-IGILLTA----------------------ARQPHQREGHDRFTLDRILA 420 VEA V+ +G +LTA ++ G FT ILA Sbjct: 486 PEQVEAVVDLLVGEVLTARSVRITRPQDDVVEPEELRRRDGSSVYEAAGSALFTAAAILA 545 Query: 421 EEAALLQLVDAQD--------IRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAP 472 E L++ D + L + + L+ Q +V +ATS +Q AP Sbjct: 546 AEQRLVETAGRCDGRRAGEDAVAIALLEQAANRVTLNAGQTALVRGMATSGARLQLAIAP 605 Query: 473 AGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAK-----ALHE 527 AG GKTT+++ALA A V LAP+ A V +RE G T+AK A H+ Sbjct: 606 AGTGKTTAMQALAA-AWAEDGGTVIGLAPSAAAAAV-LREQLGAGTDTLAKLTWSIADHD 663 Query: 528 LDKGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMF 587 L +G LV+VDEA M L+GD QLA + A GG+ Sbjct: 664 LPDWAENIGAGTLVMVDEAGMADTLSLAAAVDFVVGRGGSVRLIGDDQQLAAIGA-GGVL 722 Query: 588 AQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXX 647 + A A LSE+ R DP E ASLALRDG P A+ +Y DR+H GD Sbjct: 723 RDIVAT-HGALHLSELMRFVDPAEGAASLALRDGHP----EALGFYLDRDRIHVGDLAVV 777 Query: 648 XXXXXXXYNRDTAAGRNALLICDTTEMADALNRRI--HRDIIAADQPAVIAARGHRIAVG 705 + RD G +++++ T E+ LN+R HR V A G+ VG Sbjct: 778 THDVFTAWARDRGNGLDSIMLAPTRELVSELNQRAQAHRLNNTNSGAGVRLADGNTAYVG 837 Query: 706 DLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVD-PGNNRVAARRLHDGARAAFT 764 + +I+R N+ L V D V+NG+RW + A G+ RV R G Sbjct: 838 EQVITRTNERRLRV-------SATDWVKNGDRWTVLAAGVDGSLRV--RHARHGRVITLP 888 Query: 765 GDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIA 824 Y+ GYA TVH AQGV+ADT H + +R LY +TRGR AN +LH ++ Sbjct: 889 RTYVTGATELGYATTVHGAQGVSADTMHGLATGTESRQQLYTMLTRGRHAN--HLHLQVV 946 Query: 825 GENEHRQPNGVHIPRRGTAKEAAQRARTIIANQD 858 G+ + P+ V P + A + I+A + Sbjct: 947 GDGD---PHAVIRPENLHPQTAIDLLQGILARDN 977 >tr|A1RCJ2|A1RCJ2_ARTAT Tax_Id=290340 SubName: Full=Putative TraA-like conjugal transfer protein;[Arthrobacter aurescens] Length = 1158 Score = 216 bits (549), Expect = 2e-53 Identities = 236/790 (29%), Positives = 323/790 (40%), Gaps = 94/790 (11%) Query: 99 GNRGVHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHN 158 G R V GFDL F KS S++ AL +V L +L +HA YTRV Sbjct: 130 GRRAVAGFDLVFTPVKSASVLWALGGAEVRGAVEDAHHEAVLSS-LGWLESHAAYTRVGR 188 Query: 159 PVTGEKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEA 218 + D GL+ + H SRAGDP LHTHV V N+ DG+ S+D LY Sbjct: 189 GGVAQIDAT---GLICAMFDHRESRAGDPDLHTHVAVANKVCGVDGKWRSLDARGLYALG 245 Query: 219 KAAGVIYQATLRRELHQSLGFEWLPVDP----ATGMAEVAGIAPESVTAWSQRSSQLREW 274 AA Y L + LG E++ + E+ G+ E + +SQR + + + Sbjct: 246 VAASERYNTRFEDALARRLGVEFVERPSNRRDLRPVREIDGVPAELLRHFSQRRAAIEDR 305 Query: 275 AAG---NLALADGQNLSPA-QLSAAQKAT---RPAKPEQLSFAELRAAWRADERGV---- 323 A N G+ A Q+ AQ+AT R AK S AE W R + Sbjct: 306 YAELRRNYRATHGREPDRATQIQLAQQATLETREAKGAARSLAEQVTDWTTQARQLIGAR 365 Query: 324 RLDDXXXXXXXXXXXEGSRQPFDRRRLAAA-----AEQ----------------IDKAGF 362 RLD G+ D LA+ AEQ + + F Sbjct: 366 RLDRLASDCMGRERSAGAADVPDVDELASQIVGTIAEQRSTWTVWNVHAETERTLRRYWF 425 Query: 363 TRADLVEIVGAQL---PVDTEQSPRRLVEAAVEEIGILLTAAR--QPHQREGHDRFTLDR 417 AD E+V + + S R V E L+ A+ + G DR+T Sbjct: 426 ATADERELVTRAVVDRATGSHHSIRITEPEFVREAPELIRASDGVSMFRAHGSDRYTTSE 485 Query: 418 ILAEEAALLQL--------VDAQDIRAELWVKERDTEGLSPD--QKRVVENIATSPWLVQ 467 ++ E L+ VD ++A L + E T GL D Q+ +VE A S + Sbjct: 486 VMIAEDELIAAARSTDGPRVDPHSLQAGLAIHEART-GLVLDRGQRGLVEAFACSSARIV 544 Query: 468 PLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHE 527 PAGAGKTT++RA A + RV LA + A V E + K L E Sbjct: 545 VGIGPAGAGKTTAMRAFAA-TWQADGGRVIPLATSSRAAHVLGAE-LEMRAENLHKFLFE 602 Query: 528 LDKGT-----------LTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQ 576 + LG D+V+VDEA M G L+GD Q Sbjct: 603 HHRANDRESSDLADRWFQLGAGDVVLVDEAGMAGTLHLHQLLRIATEAGATVRLLGDPAQ 662 Query: 577 LAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTH 636 LA V A G + L + A L+ + R DP E A+LALR G P +AV +Y Sbjct: 663 LAAVDAGGAL--NLLEEETGATYLTTLHRFTDPAEGDATLALRRGNP----KAVTFYDDR 716 Query: 637 DRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQ---PA 693 DR+ G + D AG+ ++LI TT +ALN R + A Q Sbjct: 717 DRIAAGSRDAMLEAAYDHWACDVRAGKRSVLIAATTGDVNALNARARLERALAGQIEADG 776 Query: 694 VIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADP-VRNGNRWRIYAVDPGNNR--- 749 V+ G+ VGD +++R N TL + G V NG+ WR+ G +R Sbjct: 777 VVLHDGNLAGVGDWVVTRTNARTL--------RYGRSRWVHNGDAWRV----TGRHRDGS 824 Query: 750 VAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMT 809 + R L G+ DY+ + + GYA T H AQG T DT HA++ TR LYVA T Sbjct: 825 LTVRHLEHGSSVRLPRDYVADAVELGYACTAHRAQGATVDTAHALVTTEMTREGLYVAST 884 Query: 810 RGRSANTAYL 819 RGR +N Y+ Sbjct: 885 RGRDSNRWYV 894 >tr|C8XHE2|C8XHE2_NAKMY Tax_Id=479431 SubName: Full=TrwC relaxase;[Nakamurella multipartita] Length = 1231 Score = 209 bits (533), Expect = 1e-51 Identities = 240/827 (29%), Positives = 325/827 (39%), Gaps = 126/827 (15%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRV-HNPVT 161 V GFDLTF PKSVS + AL V LE + A +TR+ HN V Sbjct: 134 VAGFDLTFSVPKSVSALWALAPAPVQEQLYLAHRAALAAT-LELIEGEAVFTRLGHNGVR 192 Query: 162 GEKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAA 221 +R GLVA A+ H SR GDP LHTHV V NR DG+ ++D +L+ A A Sbjct: 193 R----VRTAGLVAAAFDHWDSRRGDPQLHTHVTVANRVQGPDGRWRTLDSATLHQAAVAY 248 Query: 222 GVIYQATLRRELHQSLGFEWLPVDPATGM-----AEVAGIAPESVTAWSQRSSQLR---E 273 Y L E+ + G W + G E+A + + A+SQRS+ + + Sbjct: 249 SETYDLLLADEITRRTGLTWDRRERQAGSNRRIGRELAPVPDALIAAFSQRSADIEAAVD 308 Query: 274 WAAGNLALADGQNLSPAQLSAAQK----ATRPAKPEQLSFAELRAAWRADERGVRLDDXX 329 A L G+ ++ ++ ATR K + AE WRA V LD Sbjct: 309 TAIAQAVLRTGRRPDVNAINRIRQHLTLATRDRKHAP-NLAESVQQWRATAEHV-LDRDP 366 Query: 330 XXXXXXXXXEGSRQPF-------DRRRLAAAAEQIDKAGFTR---------ADLVEIVGA 373 G P D A A +D R A+ + + A Sbjct: 367 TDWATTATTTGQAGPLLGPADLDDIETEAIALGVVDAVAAARPTWTRWNLTAETMRQLAA 426 Query: 374 Q-----LPVDTEQSPRRLVEAAVEEIGILLTA---ARQPHQREGHDR---------FTLD 416 + +P D R+V AA + + + LT A P D FT Sbjct: 427 RGLQFTIPADAVAVRDRVV-AAAQRLSVALTPPELAPIPDALRDADGASPFTPPEVFTST 485 Query: 417 RILAEEAALLQL--------VDAQDIR--AELWVKERDTEGLSPDQKRVVENIATSPWLV 466 +LA E LL+L VD R A + RD + DQ+ I TS +V Sbjct: 486 AVLAAEDQLLRLGQDRSGPAVDPDRARRVAGQDLPGRDHALAAEDQRPAAVQIVTSGRVV 545 Query: 467 QPLSAPAGAGKTTSLRALATMARRRHTARVFV-LAPTGTAVDVAIREGAGDVGYTIAKAL 525 L PAG GKTT++ + + + V LAP+ A V + G V A+ + Sbjct: 546 DVLVGPAGTGKTTTMAGVRAIWEAEYGPGTVVGLAPSAMAAQVLAAD-VGIVTDNTAQWI 604 Query: 526 HELDKGTL------------------------------TLGHLD--------LVVVDEAA 547 + D+ T G D L++VDEA Sbjct: 605 AQQDQQTRREHRIRLLTDAITTPENPNRIQGLRAARGRVQGEYDQWRLRPGQLLIVDEAG 664 Query: 548 MVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMR 607 M G K +LVGD QL+PV+ GG F LCA P L++V R Sbjct: 665 MCGTFTLARLAGQAAKAGAKLLLVGDPCQLSPVET-GGAFGLLCARHPDPATLTQVRRFT 723 Query: 608 DPE------ERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDTAA 661 DP+ E A+ LR G A+ Y H R+ +GD + DT Sbjct: 724 DPDGTRRAWEEQAADRLRSGDST----ALAEYDAHGRVRSGDQDQMADNAYTAWLSDTHD 779 Query: 662 GRNALLICDTTEMADALNRRIHRDIIAA---DQPAVIAAR-GHRIAVGDLIISRRNDPTL 717 G ++LI + LN+R D+I+ D A R G + GD+I++RR D T Sbjct: 780 GLTSVLIAADNDTVVELNQRARTDLISTGQVDNTATAPVRNGLSVGRGDVIVTRRIDRTQ 839 Query: 718 PVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFT-----GDYLREHI 772 P G VRNG RWR+ + RLH T Y+ +H+ Sbjct: 840 PDGTPRTADSGDGFVRNGQRWRVERAHRDGSLTV--RLHTSDDTGTTPIRLSATYVHDHV 897 Query: 773 TYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYL 819 GYA T H AQG+T DT+H + T R YVAMTRGR NTAYL Sbjct: 898 DLGYATTAHRAQGLTVDTSHVLADALTQREAFYVAMTRGRYRNTAYL 944 >tr|D1BVN4|D1BVN4_9MICO Tax_Id=446471 SubName: Full=TrwC relaxase;[Xylanimonas cellulosilytica DSM 15894] Length = 1176 Score = 208 bits (529), Expect = 3e-51 Identities = 237/809 (29%), Positives = 332/809 (41%), Gaps = 113/809 (13%) Query: 86 DGTAPNGASGRAFGNR-GVHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXL 144 D A A G R V G+DLTF KSVS++ AL D + Sbjct: 121 DAVAAITAEEERRGTRTAVAGYDLTFSVSKSVSVLWALADADTQARIADVHHAAVADV-I 179 Query: 145 EYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNR-QARAD 203 TR + ++ ++ G+ A A+ H SRA DP LHTHV+V N+ + D Sbjct: 180 ALFERDIAATRTGSHSVNQEAVV---GIAAAAFDHYDSRANDPQLHTHVVVSNKVKTLRD 236 Query: 204 GQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFEWLPVDPATGMA---EVAGIAPES 260 GQ S+DG ++ A Y A L + G W D + E+AG+ Sbjct: 237 GQWRSLDGRPIHAATVALSEYYNAVLADRMAAEFGVGWEQRDRGESRSVAWEIAGVPETL 296 Query: 261 VTAWSQRSSQLREWA---AGNLALADGQNLSPAQLSAAQ-KATRPAKPEQL--SFAELRA 314 + +S RS + E G+ S A + + +AT +PE+ S A+L A Sbjct: 297 IDEFSSRSRAIDEETDRLVDEYTATRGRRPSSATIIRLRAQATLDTRPEKQIHSLADLSA 356 Query: 315 AWRADERGVRLDDXXXXXXXXXXXEGSRQPFDR---RRLAAAAEQIDKAGFTRADLVEIV 371 WR R R G + R R +A+ A +D+ ADL+ V Sbjct: 357 GWRT--RATR------------HIGGDPTAWARALTRSVASPALTVDRVP---ADLIAEV 399 Query: 372 GAQL--PVDTEQSPRR----------------------------LVEAAVEEIGILLTA- 400 GA++ V ++S R +V A+ E + LT Sbjct: 400 GARVVAAVGEKRSTWRHWNLWAETSRQTMGWRFATTADRERLVAVVVASAEAQSVRLTPP 459 Query: 401 --ARQP---HQREGHDRFTLDRILAEEA-----ALLQLVDAQDIR-------AELWVKER 443 A P + +G RF +A + A +L+D + R A L R Sbjct: 460 DLAATPAAFRREDGTSRFRPAHTVAMSSHEILDAEQRLIDRGENRTAPVVVTAALAAANR 519 Query: 444 DTEG--LSPDQKRVVENIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTAR-----V 496 + LS +Q+ + ++TS + L PAGAGKTT++ AL RR T + V Sbjct: 520 EVVDPPLSGEQRHALGVVSTSGRQIDLLIGPAGAGKTTAMSAL----RRAWTIQYGPGSV 575 Query: 497 FVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGTLTLGHLDLVVVDEAAMVGXXXXXX 556 LAP+ A V + A T AK LHE D+G LV++DEA + Sbjct: 576 VGLAPSAAAAKVLAEDLAIACDNT-AKWLHEHDRGRADFHAGQLVIIDEATLASTLTLDR 634 Query: 557 XXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPW-AQQLSEVWRMRDPEERTAS 615 K +LVGD QL V A GG F+ L + L+EV R + E+ AS Sbjct: 635 ITALAAAAGAKVLLVGDHAQLQSVDA-GGAFSLLRHERRGDVAHLTEVHRFINEWEKDAS 693 Query: 616 LALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMA 675 LALR G ++ Y R+ G + D AGR LL+ D+ + Sbjct: 694 LALRSGEV----EVIDTYIARGRVRAGTGTEMVDAAYAAWRADIRAGRRTLLVTDSADHV 749 Query: 676 DALNRRIHRDII----AADQPAVIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADP 731 LN R + I V A +VGDL+I+RRND L Sbjct: 750 RELNARARAERILDGDTLPDREVSLADDAAASVGDLVITRRNDRALRT-------PRGGW 802 Query: 732 VRNGNRWRIYAVD-PGNNRVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADT 790 VRNG+RWRI V G+ V GA +Y+ +H+ GYA+T + AQG+T DT Sbjct: 803 VRNGDRWRIIDVHRSGDVEVRREGYTYGAAVVLPTEYVAQHLDLGYAVTAYRAQGMTVDT 862 Query: 791 THAVLGENTTRALLYVAMTRGRSANTAYL 819 H V+ TR LYVAMTRGR ANTAY+ Sbjct: 863 CHVVVAPGATRENLYVAMTRGRDANTAYV 891 >tr|A1RCJ6|A1RCJ6_ARTAT Tax_Id=290340 SubName: Full=Toprim domain;[Arthrobacter aurescens] Length = 2109 Score = 198 bits (504), Expect = 3e-48 Identities = 237/842 (28%), Positives = 342/842 (40%), Gaps = 142/842 (16%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KSVS + AL DV L++L +TR G Sbjct: 316 VAGYDLTFAPVKSVSTLWALADRDVAKEIEAAHHAAVEAT-LKWLEKEVLFTRRGR---G 371 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 ++ GL+A + H +R+ DPHLHTHV V N+ G+ +++DG LY Sbjct: 372 GLQQVKAKGLIAGMFTHRDARSSDPHLHTHVAVSNKVQDETGRWLAVDGRVLYKANVTLA 431 Query: 223 VIYQATLRRELHQSLGFEW--------LPVDPATGMAEVAGIAPESVTAWSQRSSQL--- 271 +Y + EL LG + VD + E+ G+ +WS+R S + Sbjct: 432 EMYNTLIESELIARLGVRFENRRSGLNKGVDKRP-VREIVGVDERLAKSWSKRHSAIEAR 490 Query: 272 -REWAAGNLALADGQNLSPAQLSAAQKA---TRPAKPEQLSFAELRAAWRADERGVRLDD 327 RE AA A ++ A+KA TR AK + A+ RAAW A+ + + Sbjct: 491 RRELAAAFQAEHGRPPTEGEAVTLAEKAWDQTRQAKHAPRAEADQRAAWLAEAAAI-IGS 549 Query: 328 XXXXXXXXXXXEGSR---QPFDRRRLAAAAEQI------DKAGFT----RADL---VEIV 371 G R Q + +A A+Q+ D+A + RA+ Sbjct: 550 EQAVRDMVEDCLGHRPDAQDVTDQWVAETAQQVVARVAEDRATWQVWHLRAEAQRQARAH 609 Query: 372 GAQLPVDTEQSPRRLVEAAVEEIGILL----------TAARQ----PHQREGHDRFTLDR 417 G +L + + + R+V A+ E I TAA Q P + DR Sbjct: 610 GIRL-TELDDAVDRVVATAIREHSIAFNDPDPLTRETTAAEQDVTIPAPLQRTDRPAEGG 668 Query: 418 ILAEE-------AALLQLVDAQDIRAELWVKE--RDTEG--------------------- 447 + AEE A Q I AE + E R T G Sbjct: 669 VDAEEVVSAYSLAGARQYTSRAVIEAERRIVESARHTGGRTISEVRVGIAIAEAAANELQ 728 Query: 448 LSPDQKRVVENIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTA-- 505 L+ Q+ +V +ATS VQ APAG GKTT+++ L T A + V LAP+ A Sbjct: 729 LNAAQQSLVREMATSGRAVQLALAPAGTGKTTAMQVL-TRAWQDSGGTVIGLAPSAVAAQ 787 Query: 506 ----------------------VDVAIREGAGDV-GYTIAKALHELDKGTLT-----LGH 537 ++ R G V T+AK + G + Sbjct: 788 ELGASINLENPDTNTAGTSKNLLNGPWRPGRKKVRADTLAKLVWHAKHGDAPAWMEKINS 847 Query: 538 LDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPWA 597 LV++DEA M + LVGD QLA V A GG+ + + A Sbjct: 848 KTLVLIDEAGMAATTDLAAAIDYITSRGGQVRLVGDDRQLASVAA-GGVLRDIAHQIG-A 905 Query: 598 QQLSEVWRMRDPE------ERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXX 651 LSEV R R+P+ E A+LALRDG P+ A+ +Y R+H GD Sbjct: 906 VTLSEVHRFRNPDGSLNHAEAAATLALRDGDPS----AIAFYADRGRIHVGDLGACADQA 961 Query: 652 XXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIA-----ARGHRIAVGD 706 + D A G +++LI T ++ LN R D +A I A G +++ GD Sbjct: 962 YAAWAADRADGTDSVLIAPTRDLVAELNTRARNDRLAGQPDKEIGRVLTLADGTKVSAGD 1021 Query: 707 LIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHD--GARAAFT 764 II+R ND L + + V+NG+RW + V+ + +HD G Sbjct: 1022 RIITRENDRRLRI-------SRTNWVKNGDRWHVKNVNTDGSLTV---IHDKLGKTITLP 1071 Query: 765 GDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIA 824 DY+ + + GYA TVH AQG+T T H VL + R LLYVA++RG+ AN YL+ Sbjct: 1072 ADYVSKTVQLGYATTVHGAQGITTGTCHVVLTGDEDRNLLYVALSRGKFANHLYLNVASD 1131 Query: 825 GE 826 G+ Sbjct: 1132 GD 1133 >tr|A5CLM4|A5CLM4_CLAM3 Tax_Id=443906 (traA)SubName: Full=Putative conjugal transfer protein, Dtr system;[Clavibacter michiganensis subsp. michiganensis] Length = 1492 Score = 196 bits (498), Expect = 1e-47 Identities = 225/812 (27%), Positives = 334/812 (41%), Gaps = 111/812 (13%) Query: 74 PADPEVVQRWLDDGTAPNGASGRAFGNRGVHGFDLTFCAPKSVSLIRALRAGDVXXXXXX 133 PAD E + +++ T P+ + V GFDL KSVS++ AL GD Sbjct: 164 PADKEELGKFITAATRPDQTA--------VAGFDLVCSPSKSVSVLWAL--GDTETRKAI 213 Query: 134 XXXXXXXXXX-LEYLAAHAGYTRVHNPVTGEKDLLRLPGLVAIAYQHETSRAGDPHLHTH 192 + YL A TR G + G+ A ++H SR GDP LH H Sbjct: 214 EAAQEQAVRDTIGYLEREAIATRAGT--NGVAQIEVEGGIAATVFRHYDSRNGDPQLHDH 271 Query: 193 VIVPNRQARADGQLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFEWLPVDPATG--- 249 V+V N+ DG+ +ID L+ A Y A + E+ + LG P+ G Sbjct: 272 VVVANKVKGVDGKWRTIDSKLLHRMNVPASEFYNAAVMSEVCRRLGVTTTARVPSPGKRP 331 Query: 250 MAEVAGIAPESVTAWSQRSSQLR--------EWAAGNLALADGQNLSPAQLSAAQKATRP 301 + E+AG+ P+ + +S RS+ +R E+ + D + L ++ AQ+AT Sbjct: 332 VMEIAGVDPDLIDTFSSRSASIRATTERLVEEYQRDHGRAPDAKTL----IAIAQQATLE 387 Query: 302 AKPEQLSFAELRAAWRADERGVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQIDK-- 359 +P++ ++R+ E V + +R + AA+ E +D+ Sbjct: 388 TRPQK---DDVRSPQAIHEAAVA---RVGAGRAAGLVDAARALAPTNKEAASVE-VDEIT 440 Query: 360 ---------------AGFTRADLVEIVGAQLPVDTEQSP--RRLVEAAVEEIGILLTAAR 402 A A+ + A +P + P +++ AA+ G + Sbjct: 441 AHVLRTVEEHHAVWGAHVIEAEARRHLAALIPDQSVAEPLVQQVTRAALG--GSVTLTPP 498 Query: 403 QPH---------------QREGHDRFTLDRILAEEAALLQLVDAQDIRAELWVKE----- 442 PH +G FT RIL E QL+DA R + Sbjct: 499 SPHGAFTPLTRSDGSSIYDHKGKTLFTSTRILDAED---QLLDAARTRTVSPISRDTFER 555 Query: 443 ---RDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVL 499 + T L Q+ + ATS + PAGAGKTT+LR AT A R+ L Sbjct: 556 TAAQHTGPLDAGQRDLAREFATSDRELVVGIGPAGAGKTTALRLAAT-ALEDGGRRMIGL 614 Query: 500 APTGTAVDVAIREGAGDVGYTI-----AKALHELD-KGTLTLGHLDLVVVDEAAMVGXXX 553 AP+ A V I E G TI A A EL K + G D++VVDEA M G Sbjct: 615 APSAPAASV-IAEAVGIEATTIHGFLTAHAQAELPAKYEVRAG--DVLVVDEAGMAGTQR 671 Query: 554 XXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERT 613 L+GD QL+ V+A G + +L + +L V R +D +E Sbjct: 672 LAALHTIAREYGAHVRLIGDDRQLSAVEAGGAL--RLIDREVGSVRLEHVHRFQDADEAE 729 Query: 614 ASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTE 673 ASL LRD P WY+ +DR+ GD + DT G +L++ T Sbjct: 730 ASLHLRD--PLRPGDPFAWYQANDRVIGGDVDRMTDAVFAGWQTDTDVGLRSLMLAPTGA 787 Query: 674 MADALNRRIHRDIIAADQPAVIAARGHRIA------VGDLIISRRNDPTLPVFDATDIKK 727 LN R IAA V R ++ VGD+I +RRN+ L I+ Sbjct: 788 TVTELNARAQAHRIAAG--TVTGTRSVKLRDDLSAHVGDVIATRRNESLLR------IQN 839 Query: 728 GADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVT 787 G D V+NG+ W++ + + R H A Y+REH+ GYA T+ +QG+T Sbjct: 840 GRDRVKNGDLWQVTRIGADGSLDVVHRDH-AAPVTLPAGYVREHVELGYARTISRSQGLT 898 Query: 788 ADTTHAVLGENTTRALLYVAMTRGRSANTAYL 819 ADT+H + E+ TR Y +TRG+ +N YL Sbjct: 899 ADTSHVLGDESMTRETAYTGLTRGKQSNRLYL 930 >tr|C7Q5H7|C7Q5H7_CATAD Tax_Id=479433 SubName: Full=TrwC relaxase;[Catenulispora acidiphila] Length = 1386 Score = 195 bits (496), Expect = 2e-47 Identities = 223/824 (27%), Positives = 323/824 (39%), Gaps = 103/824 (12%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V GFDL F KS +L+ AL LE L HA YTR TG Sbjct: 164 VAGFDLVFAPVKSAALVWALDERPEVRAAVREAHEAARDAALEILETHAAYTR-----TG 218 Query: 163 EKDLLRLP--GLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKA 220 + ++ GLVA + H SRAGDP+LHTHV + ++ DG S+D +LY A Sbjct: 219 RGGIAQIETRGLVAARFDHFDSRAGDPNLHTHVAISSKVQGVDGIWRSLDARALYKMTVA 278 Query: 221 AGVIYQATLRRELHQSLGFEWLPVDPATG----MAEVAGIAPESVTAWSQRSSQLR---E 273 Y EL G W TG + E+AGI P+ V +S R +++ E Sbjct: 279 VSEFYNTRFETELTTRTGVSWTERPDTTGKREPVREIAGIDPKMVAHFSSRRTEIEARYE 338 Query: 274 WAAGNLALADGQNLSPA----QLSAAQKATRPAKPEQLSFAELRAAWRAD------ERGV 323 G + S A A TR K S AE+R WR + V Sbjct: 339 QLLRGFRREHGYDPSRAVCHDLARQANLETREGKKAPRSLAEMREDWRVSLTDTFGRKAV 398 Query: 324 RLDDXXXXXXXXXXXEGSRQ--PFDRRRLAAA-----------------------AEQID 358 R D + +++ P D +AAA A +I+ Sbjct: 399 R--DLMAAVPGTAAEQAAKKADPVDVDAIAAAVVDRVGQNRSTWTVWNLRAEAERAARIE 456 Query: 359 KAGFTRADLVEIVGA--QLPVDTEQSPRRLVEAAVEEIGILLTAARQP-HQREGHDRFTL 415 T A+ E+V A V S R A ++E L A R+ G +FT Sbjct: 457 HGVSTPAEHQELVSAIVAAAVSPAHSIRVDAPALLDEPASLRRADRESVFTEHGAAKFTS 516 Query: 416 DRILAEEAALLQL--------VDAQDIRAEL-WVKERDTEGLSPDQKRVVENIATSPWLV 466 ILA E L++ A + A L + R L Q + A LV Sbjct: 517 AAILAAETRLVEAATTRTAFGATAARVGAVLDGFEARSGVRLDAGQHHMATAFAVDDRLV 576 Query: 467 QPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALH 526 PAG+GKTT++RA A A R+ LA + A DV R+ G + K LH Sbjct: 577 VAGIGPAGSGKTTAMRAYAE-AVAASGQRLIPLATSSAAADVLARD-LGAKAENLHKFLH 634 Query: 527 E------------LDKGT--------LTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXX 566 E L GT L D+V+VDEA M G Sbjct: 635 EYSDAPTAGASKALWNGTGIPAWARGFALRPGDVVLVDEAGMAGTFNLDRLVQIAAHRGA 694 Query: 567 KTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPV 626 L+GD QL V++ G + +L A+ A +LS + R +P E A+L +R G + Sbjct: 695 VVRLLGDYRQLGAVESGGAL--RLIANQAGAVELSTLHRFNNPREAEATLKVRVGDSS-- 750 Query: 627 RRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDI 686 A+++Y R+ +G + D AG+ ++ TT AL+ + D Sbjct: 751 --ALDFYADAGRIRSGSAQGMIEAAYAGWKTDMLAGKKTIMAAATTADVTALSAQARLDR 808 Query: 687 IAADQPAVIAAR---GHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAV 743 I A AR G+ GD I++R ND + +G D V+NG+ W + Sbjct: 809 IEAGHVEADGARLRDGNLAGRGDWIVTRDND------RKNKVSRGRDWVKNGDAWTVTKR 862 Query: 744 DPGNNRVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRAL 803 + H G + +Y+ H+ YA T + AQG T DT H ++ +R Sbjct: 863 HRDGSLTVKNIEHQGT-VRLSAEYVSAHVELLYATTTNRAQGSTVDTAHPLITAEMSREN 921 Query: 804 LYVAMTRGRSANTAYL--HERIAGENEHRQPNGVHIPRRGTAKE 845 LYV ++R + + Y+ HE + + + R + PR+ A+E Sbjct: 922 LYVILSRAQERTSLYVETHELLPFDEDDRLDRVKNDPRQFAARE 965 >tr|C3JH47|C3JH47_RHOER Tax_Id=596309 SubName: Full=DNA primase catalytic core domain protein;[Rhodococcus erythropolis SK121] Length = 1568 Score = 193 bits (491), Expect = 8e-47 Identities = 229/806 (28%), Positives = 340/806 (42%), Gaps = 85/806 (10%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DL F KSVS++ L D L ++ + A TR T Sbjct: 179 VAGYDLVFTPVKSVSVLWGL-GDDEVRTAIEQAHKDAVNETLAWIESEAALTRRG---TA 234 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 + + GLV + H +R GDP+LHTH V N+ DG S+D L+ A A Sbjct: 235 GVEQIDTHGLVIAQFDHFDNRNGDPNLHTHCAVSNKVRGIDGNWSSLDARVLHRIAVAGA 294 Query: 223 VIYQATLRRELHQSL--GFEWLPVDPATG-----MAEVAGIAPESVTAWSQRSSQLREWA 275 Y + ++ ++L FE D + G + E+AG+ E + +S+R Q+ E A Sbjct: 295 ARYNRIVADKISRALPVAFE----DRSRGENKQPVREIAGVPQELLDGFSRRP-QIMERA 349 Query: 276 AGNLA---LADGQNLSPA-QLSAAQKAT---RPAKPEQLSFAELRAAWRADERGVRLDDX 328 +A G+N S Q+S Q+AT R K S A +R WR E+ V + Sbjct: 350 NELMAEYRAEHGKNPSKVVQISLVQRATLETRSGKQTPKSLAAMREEWR--EQAVNMLGA 407 Query: 329 XXXXXXXXXXEGSRQPF------DRRRLAAAAEQ---IDKAGFTRADL------------ 367 +PF D ++A+AA + + ++ +T A++ Sbjct: 408 DGIDNLLATALSQDEPFIDVTEFDADQVASAAVERVSLQRSTWTEANVRTVAEDMLSRVK 467 Query: 368 ---VEIVGAQLPVDTEQSPRR---LVEAAVEEIGILLTAARQPHQREGHD--RFTLDRIL 419 E A + + ++ R LV+ +++++ +T A H R+T +L Sbjct: 468 FPSEEQANAAVELVVNRALHRDSLLVDISLDQMPEAMTRANGESTLTDHQKARYTSTAML 527 Query: 420 AEEAALL------QLVDAQDIRAELWVKERDT-EG--LSPDQKRVVENIATSPWLVQPLS 470 E LL + D E + R+ EG + Q + ++ATS L+ Sbjct: 528 DAEQRLLGAAHTPTVFTVSDSAFETALAYRENLEGRPFNKGQIALARHLATSEALLAVGI 587 Query: 471 APAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDK 530 PAG GKTTS++A+ T A + V L P+ A V + E G G TI L Sbjct: 588 GPAGTGKTTSMKAV-TDAWQAQGRDVIALGPSAAAATV-LGEDIGVRGRTIDDILTRHRL 645 Query: 531 GT-LTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQ 589 G + +++VDE+ M L+GD QL+ V A GG Sbjct: 646 GIDAAINRGAMLLVDESGMASTHQLDALVQIAAEHGAVVRLIGDPAQLSAVNA-GGALGL 704 Query: 590 LCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXX 649 L D A +L EV R D +ER SLALR G + +EWY RL G Sbjct: 705 LARDTR-APELEEVVRFSDDDERDISLALRKGEHS----VIEWYEERARLIGGSRDELLD 759 Query: 650 XXXXXYNRDTAAGRNALLICDTTEMADALNR---RIHR-DIIAADQPAVIAARGHRIAVG 705 + DTAAG ++++ TT A +LN+ IH + D G VG Sbjct: 760 KILRDHLADTAAGSTSVMLAPTTADAASLNQGAQAIHLVNGTLTDGARTALTAGDHAYVG 819 Query: 706 DLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTG 765 D+I++RRN + T + V NG+ W + AV + +A + H G Sbjct: 820 DIIVTRRNQNNITAVGGT---RAGQRVENGDLWTVQAVTE-HGIIAVHKRHGGT-VTLPN 874 Query: 766 DYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYL--HERI 823 YL +H GYA T+H AQG+T D ++LG + TR YVA+TRGR N AYL E Sbjct: 875 WYLTQHTELGYAHTIHRAQGMTVDVARSLLGASVTREAGYVALTRGRHGNYAYLVTDELP 934 Query: 824 AGENEHRQPNGVHIPRRGTAKEAAQR 849 G+ +H QP+ V R G E R Sbjct: 935 DGDLDH-QPDPVS-TRSGVLAEILDR 958 >tr|Q9ETQ3|Q9ETQ3_COREQ Tax_Id=43767 (traA)SubName: Full=Conjugal transfer protein; SubName: Full=TraA-like protein;[Corynebacterium equii] Length = 1367 Score = 192 bits (487), Expect = 2e-46 Identities = 220/806 (27%), Positives = 329/806 (40%), Gaps = 75/806 (9%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DL F KS+SL+ L V L ++ YTR G Sbjct: 127 VAGYDLVFTPVKSISLLWGLGDAQVKEAVEEAHKQAVDEA-LAWIEDEVIYTRRG---AG 182 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 ++ GL+ + H +R GDP+LHTH + NR A+G+ +IDG LY AA Sbjct: 183 GARKVKAEGLLIARFDHFDNRVGDPNLHTHSAILNR-VLAEGKWTTIDGQVLYKANVAAS 241 Query: 223 VIYQATLRRELHQSLGFEWLP-VDPATG---MAEVAGIAPESVTAWSQRSSQLREWAAGN 278 Y + + + LG + P D A G + EV GI + +S+R+ A Sbjct: 242 ERYNTRVADLVARKLGVTFAPRPDTAVGKQPVYEVEGIPVGLLEEFSRRAQIEDRQAELA 301 Query: 279 LALADGQNLSP---AQLSAAQKAT---RPAKPEQLSFAELRAAWRADERGVRLDDXXXXX 332 D +P Q + AQ+AT R AK S AELRA WR + Sbjct: 302 REYKDKYGKNPPKKVQYAQAQQATLDTRNAKNPPRSLAELRAEWRERASAILAGSDPSTL 361 Query: 333 XXXXXXEGSRQP-FDRRRLAAAAEQID-----KAG-FTRADLVEIVGAQL-------PVD 378 R+P F +L A +++ K G +T L + +L +D Sbjct: 362 VDEVQSGRDRRPAFYAPQLPALVQEVTDDLSRKVGSWTVFSLQAEIQRRLREFSFAGEMD 421 Query: 379 TEQSPRRLVEAAVEEIGI-----LLTAARQPHQR------------EGHDRFTLDRILAE 421 + V+ AV + + + A +R R+T +L Sbjct: 422 VNEYVSDAVDLAVRDYCLPTFTEVYDAPESVSERVERGLRRMVDVDRAEMRYTAQAVLDA 481 Query: 422 EAALLQLVDAQD--------IRAELWVKERDT-EGLSPDQKRVVENIATSPWLVQPLSAP 472 E + + D IR ++ E+ L DQ +VE+ T+ V Sbjct: 482 EEFMRDNAEIDDEHTVAERVIRRQIRRAEKKAGHTLGSDQIAMVEHFLTAKKKVAVAVGA 541 Query: 473 AGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGT 532 AGAGKTT+ +A A +V L P+ A +V + E G TIA L G Sbjct: 542 AGAGKTTAATVIAR-AWEDTNGKVVALGPSARAAEV-LGEEISVEGRTIADVLTRARVGI 599 Query: 533 LT-LGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLC 591 T + DL++VDEA M L+GD QLA V+A GG+ L Sbjct: 600 PTGIDSGDLLLVDEAGMASARDLADLTRIATEAGAVVRLLGDPQQLASVEA-GGVLRDL- 657 Query: 592 ADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXX 651 A+ A L +V R + E ASL LR G A++WY DR+ G Sbjct: 658 AERTDAPFLEQVHRFKTEGEAEASLLLRSGAG----NALDWYERRDRIRDGMRHELPDMV 713 Query: 652 XXXYNRDTAAGRNALLICDTTEMADALNRRI---HRDIIAADQPAVIAARGHRIAVGDLI 708 Y D A + AL++ T ++ LN + +R P V+ A G AVGD++ Sbjct: 714 FDAYVADVEADKVALMVAPTNDLVRELNIKAAAYYRANGTVTGPGVVLADGLEAAVGDVV 773 Query: 709 ISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYL 768 ++R+N+ V DA + G V+NG+ W + + + + DG DY+ Sbjct: 774 VTRKNNSKYVVKDADGQRAGR--VKNGDLWTVSEIGEDGSLRLRNNVSDG-EVTVAADYI 830 Query: 769 REHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYL--HERIAGE 826 +++ GYA TVH +QG+T + H + N R LYVAMTRG++ N Y E + Sbjct: 831 TDNVQLGYATTVHRSQGMTVGSCHVLAAANMDRQSLYVAMTRGKNTNIVYAANDELPDWD 890 Query: 827 NEHR---QPNGVHIPRRGTAKEAAQR 849 EHR P + + + A++ +QR Sbjct: 891 FEHRPDEHPAAIDLLNKIVARDGSQR 916 >tr|B4F3E3|B4F3E3_COREQ Tax_Id=43767 SubName: Full=Putative conjugal transfer protein TraA;[Corynebacterium equii] Length = 1422 Score = 192 bits (487), Expect = 2e-46 Identities = 220/806 (27%), Positives = 329/806 (40%), Gaps = 75/806 (9%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DL F KS+SL+ L V L ++ YTR G Sbjct: 182 VAGYDLVFTPVKSISLLWGLGDAQVKEAVEEAHKQAVDEA-LAWIEDEVIYTRRG---AG 237 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 ++ GL+ + H +R GDP+LHTH + NR A+G+ +IDG LY AA Sbjct: 238 GARKVKAEGLLIARFDHFDNRVGDPNLHTHSAILNR-VLAEGKWTTIDGQVLYKANVAAS 296 Query: 223 VIYQATLRRELHQSLGFEWLP-VDPATG---MAEVAGIAPESVTAWSQRSSQLREWAAGN 278 Y + + + LG + P D A G + EV GI + +S+R+ A Sbjct: 297 ERYNTRVADLVARKLGVTFAPRPDTAVGKQPVYEVEGIPVGLLEEFSRRAQIEDRQAELA 356 Query: 279 LALADGQNLSP---AQLSAAQKAT---RPAKPEQLSFAELRAAWRADERGVRLDDXXXXX 332 D +P Q + AQ+AT R AK S AELRA WR + Sbjct: 357 REYKDKYGKNPPKKVQYAQAQQATLDTRNAKNPPRSLAELRAEWRERASAILAGSDPSTL 416 Query: 333 XXXXXXEGSRQP-FDRRRLAAAAEQID-----KAG-FTRADLVEIVGAQL-------PVD 378 R+P F +L A +++ K G +T L + +L +D Sbjct: 417 VDEVQSGRDRRPAFYAPQLPALVQEVTDDLSRKVGSWTVFSLQAEIQRRLREFSFAGEMD 476 Query: 379 TEQSPRRLVEAAVEEIGI-----LLTAARQPHQR------------EGHDRFTLDRILAE 421 + V+ AV + + + A +R R+T +L Sbjct: 477 VNEYVSDAVDLAVRDYCLPTFTEVYDAPESVSERVERGLRRMVDVDRAEMRYTAQAVLDA 536 Query: 422 EAALLQLVDAQD--------IRAELWVKERDT-EGLSPDQKRVVENIATSPWLVQPLSAP 472 E + + D IR ++ E+ L DQ +VE+ T+ V Sbjct: 537 EEFMRDNAEIDDEHTVAERVIRRQIRRAEKKAGHTLGSDQIAMVEHFLTAKKKVAVAVGA 596 Query: 473 AGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGT 532 AGAGKTT+ +A A +V L P+ A +V + E G TIA L G Sbjct: 597 AGAGKTTAATVIAR-AWEDTNGKVVALGPSARAAEV-LGEEISVEGRTIADVLTRARVGI 654 Query: 533 LT-LGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLC 591 T + DL++VDEA M L+GD QLA V+A GG+ L Sbjct: 655 PTGIDSGDLLLVDEAGMASARDLADLTRIATEAGAVVRLLGDPQQLASVEA-GGVLRDL- 712 Query: 592 ADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXX 651 A+ A L +V R + E ASL LR G A++WY DR+ G Sbjct: 713 AERTDAPFLEQVHRFKTEGEAEASLLLRSGAG----NALDWYERRDRIRDGMRHELPDMV 768 Query: 652 XXXYNRDTAAGRNALLICDTTEMADALNRRI---HRDIIAADQPAVIAARGHRIAVGDLI 708 Y D A + AL++ T ++ LN + +R P V+ A G AVGD++ Sbjct: 769 FDAYVADVEADKVALMVAPTNDLVRELNIKAAAYYRANGTVTGPGVVLADGLEAAVGDVV 828 Query: 709 ISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYL 768 ++R+N+ V DA + G V+NG+ W + + + + DG DY+ Sbjct: 829 VTRKNNSKYVVKDADGQRAGR--VKNGDLWTVSEIGEDGSLRLRNNVSDG-EVTVAADYI 885 Query: 769 REHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYL--HERIAGE 826 +++ GYA TVH +QG+T + H + N R LYVAMTRG++ N Y E + Sbjct: 886 TDNVQLGYATTVHRSQGMTVGSCHVLAAANMDRQSLYVAMTRGKNTNIVYAANDELPDWD 945 Query: 827 NEHR---QPNGVHIPRRGTAKEAAQR 849 EHR P + + + A++ +QR Sbjct: 946 FEHRPDEHPAAIDLLNKIVARDGSQR 971 >tr|A1SCI1|A1SCI1_NOCSJ Tax_Id=196162 SubName: Full=DNA primase catalytic core, N-terminal domain;[Nocardioides sp.] Length = 1980 Score = 190 bits (482), Expect = 9e-46 Identities = 228/842 (27%), Positives = 334/842 (39%), Gaps = 144/842 (17%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DLTF KSVS + AL DV L +L +TR G Sbjct: 185 VAGYDLTFAPVKSVSTLWALADRDVAKEIEAAHHSAVEAT-LSWLEKEVLFTRRGR---G 240 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 ++ GL+A + H +R+ DPHLHTHV V N+ G+ +++DG L+ Sbjct: 241 GLQQVKAKGLIAGMFTHRDARSSDPHLHTHVAVSNKVQDETGRWLAVDGRVLFKANVTLA 300 Query: 223 VIYQATLRRELHQSLG--FEWLPVDPATGM-----AEVAGIAPESVTAWSQRSSQL---- 271 +Y + EL LG FE A G+ E+ G+ WS+R S + Sbjct: 301 EMYNTLIESELIARLGVRFENRRSGLAKGVDKRPVREIVGVDERLAKTWSKRHSAIEARR 360 Query: 272 REWAAGNLALADGQNLSPAQLSAAQKA---TRPAKPEQLSFAELR-------AAWRADER 321 RE AA ++ A+KA TR AK + A+ R AA E+ Sbjct: 361 RELAAAFQTEHGRPPTEGEAVTLAEKAWDQTRQAKHAPRAEADQRAAWLTEAAAIIGSEQ 420 Query: 322 GVRLDDXXXXXXXXXXXEGSRQPFDRRRLAAAAEQIDKAGFTRADL------------VE 369 VR S+ D A + +++ RA Sbjct: 421 AVR----DMVEGCLGHRPDSQDVTDEWVAETAQDVVERVAEDRATWQVWHLHAEAQRQAR 476 Query: 370 IVGAQLPVDTEQSPRRLVEAAVEEIGILL----------TAARQ------PHQREGHD-- 411 +LP D + + R+V A+ + I TAA Q P QR H Sbjct: 477 AHRVRLP-DLDAAVDRVVATAIADHSIAFNAPDPLTHAATAAEQDVTIPEPLQRTEHGVN 535 Query: 412 --------------RFTLDRILAEEAALLQLV------DAQDIRAELWVKERDTEGLSPD 451 ++T ++ E +++ ++R + + E L + Sbjct: 536 GEEIVSVYSLAGARQYTSQAVIDAERRIVESARRTGGRTISEVRVGIAIAEAAANELQLN 595 Query: 452 --QKRVVENIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVD-- 507 Q+ +V +ATS VQ APAG GKTT+++ L T A + V LAP+ A Sbjct: 596 AAQQSLVREMATSGRAVQLALAPAGTGKTTAMQVL-TRAWQDSGGTVIGLAPSAVAAQEL 654 Query: 508 -VAIREGAGDVGY------------------------TIAKALHELDKGTLT-----LGH 537 +I GD G T+AK + +KG + Sbjct: 655 GASINPETGDAGVGAGGKAMGLFQGPWRPGRKKVRADTLAKLVWHAEKGGAPSWVERINP 714 Query: 538 LDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPWA 597 LV++DEA M + LVGD QLA V A GG+ + + A Sbjct: 715 KTLVLIDEAGMAATTDLAAAIDYITSRGGQVRLVGDDRQLASVAA-GGVLRDIAHQIG-A 772 Query: 598 QQLSEVWRMRDPE------ERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXX 651 LSEV R R+ + E A+LALR+G P+ A+ +Y R+H GD Sbjct: 773 VTLSEVHRFRNRDGSLNHAEAAATLALREGDPS----AIAFYADRGRIHVGDLGACADQA 828 Query: 652 XXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPAVIA-----ARGHRIAVGD 706 + D AA +++LI T + LN R D +A I A G R++ GD Sbjct: 829 YAAWAADRAADTDSVLIAPTRALVAELNTRARNDRLAGLDEKEIGRVLTLADGSRVSEGD 888 Query: 707 LIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHD--GARAAFT 764 II+R ND L + + V+NG+RW + V+ + R +HD G Sbjct: 889 RIITRENDRRLRI-------SRTNWVKNGDRWHVKKVNADGS---LRVVHDQLGKTITLP 938 Query: 765 GDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYLHERIA 824 DY+ + + GYA TVH AQG+T T H VL + R LLYVA++RG+ AN YL+ Sbjct: 939 ADYVSKTVQLGYATTVHGAQGITTGTCHVVLTGDEDRNLLYVALSRGKFANHLYLNVASD 998 Query: 825 GE 826 G+ Sbjct: 999 GD 1000 >tr|B4F382|B4F382_COREQ Tax_Id=43767 SubName: Full=Putative conjugal transfer protein TraA;[Corynebacterium equii] Length = 1422 Score = 189 bits (481), Expect = 1e-45 Identities = 218/806 (27%), Positives = 328/806 (40%), Gaps = 75/806 (9%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DL F KS+ L+ L V L ++ YTR G Sbjct: 182 VAGYDLVFTPVKSICLLWGLGDAQVKEAVEEAHKQAVDEA-LAWIEDEVIYTRRG---AG 237 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 ++ GL+ + H +R GDP+LHTH + NR A+G+ +IDG LY AA Sbjct: 238 GARKVKAEGLLIARFDHFDNRVGDPNLHTHSAILNR-VLAEGKWTTIDGQVLYKANVAAS 296 Query: 223 VIYQATLRRELHQSLGFEWLP-VDPATG---MAEVAGIAPESVTAWSQRSSQLREWAAGN 278 Y + + + LG + P D A G + EV GI + +S+R+ A Sbjct: 297 ERYNTRVADLVARKLGVTFAPRPDTAVGKQPVYEVEGIPVGLLEEFSRRAQIEDRQAELA 356 Query: 279 LALADGQNLSP---AQLSAAQKAT---RPAKPEQLSFAELRAAWRADERGVRLDDXXXXX 332 D +P Q + AQ+AT R AK S AELRA WR + Sbjct: 357 REYKDKYGKNPPKKVQYAQAQQATLDTRNAKNPPRSLAELRAEWRERASAILAGSDPSTL 416 Query: 333 XXXXXXEGSRQP-FDRRRLAAAAEQID-----KAG-FTRADLVEIVGAQL-------PVD 378 R+P F +L A +++ K G +T L + +L +D Sbjct: 417 VDEVQSGRDRRPAFYAPQLPALVQEVTDDLSRKVGSWTVFSLQAEIQRRLREFSFAGEMD 476 Query: 379 TEQSPRRLVEAAVEEIGI-----LLTAARQPHQR------------EGHDRFTLDRILAE 421 + V+ AV + + + A +R R+T +L Sbjct: 477 VNEYVSDAVDLAVRDYCLPTFTEVYDAPESVSERVERGLRRMVDVDRAEMRYTAQAVLDA 536 Query: 422 EAALLQLVDAQD--------IRAELWVKERDT-EGLSPDQKRVVENIATSPWLVQPLSAP 472 E + + D IR ++ E+ L DQ ++E+ T+ V Sbjct: 537 EEFMRDNAEIDDEHTVAERVIRRQIRRAEKKAGHTLGSDQIAMIEHFLTARKKVAVAVGA 596 Query: 473 AGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELDKGT 532 AGAGKTT+ +A A +V L P+ A +V + E G TIA L G Sbjct: 597 AGAGKTTAATVIAR-AWEDINGKVVALGPSARAAEV-LGEEISVEGRTIADVLTRARVGI 654 Query: 533 LT-LGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLC 591 T + DL++VDEA M L+GD QLA V+A GG+ L Sbjct: 655 PTGIDRGDLLLVDEAGMASARDLADLTRIATEAGAVVRLLGDPQQLASVEA-GGVLRDL- 712 Query: 592 ADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLHTGDXXXXXXXX 651 A+ A L +V R + E ASL LR G A++WY DR+ G Sbjct: 713 AERTDAPFLEQVHRFKTEGEAEASLLLRSGAD----NALDWYERRDRIRDGMRHELPDMV 768 Query: 652 XXXYNRDTAAGRNALLICDTTEMADALNRRI---HRDIIAADQPAVIAARGHRIAVGDLI 708 Y D A + AL++ T ++ LN + +R P V+ A G AVGD++ Sbjct: 769 FDAYVADVEADKVALMVAPTNDLVRDLNIKAAAYYRANGTVTGPGVVLADGLEAAVGDVV 828 Query: 709 ISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRLHDGARAAFTGDYL 768 ++R+N+ V DA + G V+NG+ W + + + + DG DY+ Sbjct: 829 VTRKNNSKYVVKDADGQRSGR--VKNGDLWTVSEIGEDGSLRLRNNVSDG-EVTVAADYI 885 Query: 769 REHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSANTAYL--HERIAGE 826 +++ GYA TVH +QG+T + H + N R LYVAMTRG++ N Y E + Sbjct: 886 TDNVQLGYATTVHRSQGMTVGSCHVLAAANMDRQSLYVAMTRGKNTNIVYAANDELPDWD 945 Query: 827 NEHR---QPNGVHIPRRGTAKEAAQR 849 EHR P + + + A++ +QR Sbjct: 946 FEHRPDEHPAAIDLLNKIVARDGSQR 971 >tr|C0E195|C0E195_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 1433 Score = 187 bits (474), Expect = 8e-45 Identities = 215/845 (25%), Positives = 347/845 (41%), Gaps = 112/845 (13%) Query: 105 GFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTGEK 164 GFD TF KSVS++ AL A L + + YTR+ T Sbjct: 183 GFDWTFSPTKSVSVLWAL-ADKKTANKIEECHHKAVQEALSWAEKNVIYTRIG---TNGI 238 Query: 165 DLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAGVI 224 + GL+A + H +R GDP LH+HV+V N+ DG+ +++D ++ A++ Sbjct: 239 QQVTTQGLIAAEFTHFDTRTGDPDLHSHVLVSNKVQAPDGRWLTLDSQEVFRNAQSISAR 298 Query: 225 YQATLRRELHQSLGFEWLPVD---PATGMAEVAGIAPESVTAWSQRSSQLR----EWAAG 277 Y L L + +G + P +T + E+AG+ ++ +S R Q R + A Sbjct: 299 YDTALMEILSREMGLTFEPSQREGESTPVWEIAGVPQYLISLFSSRREQARPVFDQLVAD 358 Query: 278 NLALADGQNLSPAQLSAAQKA---TRPAKPEQLSFAELRAAWRADERGVRLDDXXXXXXX 334 D Q ++ +KA TR AK S +LR W +G+ D Sbjct: 359 YSKQHDKQPDKITKIKLWEKAILQTRDAKKPAQSLGQLRENWAIRVQGLDHGDELLQQIQ 418 Query: 335 XXXX--EGS-RQPF-DRRRLAAAAEQIDKAGFTR---------------ADLVEIVGAQL 375 EG RQ F D ++ + EQ+ + A E+ G + Sbjct: 419 EVVANPEGDQRQVFGDGKKWQESVEQVAEIALANVTSKRGVFGDHHVRTAVFTELKGWKF 478 Query: 376 --PVDTEQSPRRLVEAAVEEIGILLTA--------------ARQPHQREGHDRFTLDRIL 419 + ++ ++V+ +E+ + L+ A +R G +R+T IL Sbjct: 479 HNAAELAKAETQIVDYILEQKVVSLSPGEVLDLPSRLLGDNALGVDRRVGRNRYTTQEIL 538 Query: 420 AEEAALLQ--------LVDAQDIRAELWVKERDTEG--LSPDQKRVVENIATSPWLVQPL 469 E +L +DI L E+ G L+ Q+ + ++ T+ LV Sbjct: 539 NAEQLVLDSCTEPTPYTAPNRDIDKALAGHEK-AHGWTLNEGQEAMARSLLTTGALVSCG 597 Query: 470 SAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKAL---- 525 PAG GKTTS++ ++ + + + V LAP+ A V + E G TI K Sbjct: 598 VGPAGTGKTTSMQIVSKVWKNQGR-NVIGLAPSAQAASV-LGEEIGCEATTIDKLTFTWR 655 Query: 526 --------HELDKGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQL 577 H+LD + + D+++VDEA M ++GD HQL Sbjct: 656 GQHSKLPGHDLDALEIKIQPGDMLLVDEAGMASTQNLAALVEIAKESGAVVRMIGDPHQL 715 Query: 578 APVKARGGMFAQLCADLPWAQQLSEVWRM---RDPEERTASLALRDGGPAPVRRAVEWYR 634 + V + GG+F C + A +L+EV R +D E+ ASL +R G + ++ Y Sbjct: 716 SAVGS-GGLFNSAC-QITDAVELTEVMRFSGGKDTEQADASLKIRKGD----KSGLDVYE 769 Query: 635 THDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAA----D 690 + + G Y D A GR +L++ T D +N+++ I+ D Sbjct: 770 QREWVSGGTRQDMVDSAVADYLNDIARGRKSLIVASTNADVDRMNQQVRAYRISIGEVDD 829 Query: 691 QPAVIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRV 750 + + RG I VGD++I+R+N + G V NG + + + + V Sbjct: 830 KHHMRVGRGDVIGVGDIVITRQNKQFYRKVQGKNTVIGK--VMNGQLFTVVGLQRDGD-V 886 Query: 751 AARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTR 810 + L G R DY E++ GYA TVH AQG T D AV+ + RA LYVA++R Sbjct: 887 EVKDLKTGKRQVIPADYAAENMHLGYAATVHRAQGATVDVCRAVVDQAVDRAGLYVALSR 946 Query: 811 GRSANTAY-------------LHERIAGENEHRQPNGVHIPRR----GTAKEAAQRARTI 853 G+ N AY +H + G ++ G PR+ AK+ R+ T Sbjct: 947 GKKENRAYCVTEADFDFDAEDMHYHMGGHDD-----GELTPRKVLEQALAKDNRSRSATE 1001 Query: 854 IANQD 858 IA Q+ Sbjct: 1002 IAQQE 1006 >tr|C2BM19|C2BM19_9CORY Tax_Id=525264 (traA)SubName: Full=TraA protein;[Corynebacterium pseudogenitalium ATCC 33035] Length = 1488 Score = 185 bits (469), Expect = 3e-44 Identities = 206/790 (26%), Positives = 319/790 (40%), Gaps = 93/790 (11%) Query: 101 RGVHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPV 160 + V GFDLTF KSVS+ AL + + + + +A +TRV Sbjct: 173 QSVSGFDLTFSPAKSVSVAWAL-SDEKTARRIEALHHQAVKEAIAWAEGNALFTRVGKQ- 230 Query: 161 TGEKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKA 220 ++ ++ G VA ++H +RAGDP LH+HV+V N+ DG+ +SIDG +L ++ Sbjct: 231 --GREQVKTKGFVASEFKHYDTRAGDPDLHSHVLVSNKVQTEDGRWLSIDGYTLMKYHQS 288 Query: 221 AGVIYQATLRRELHQSLGFEWLPVDPATGMA---EVAGIAPESVTAWSQR--------SS 269 Y + L L +G+ + D E+ GI+ + ++S+R Sbjct: 289 ISHRYDSILNTLLSNEIGYTFTACDHGANKEPTWEIDGISASLMESFSRRRRGAQPVYKR 348 Query: 270 QLREWAAGNLALADGQNLSPAQLSAAQKATRPAKPEQLSFAELRAAWRADERGVRLDDXX 329 + E+ A A + + A + TR AK E S ELRA W+A+ Sbjct: 349 LVEEFVAARGATPNSVEVGRLWQQAILE-TRDAKREPESLTELRAGWKAEVSARDTGAEE 407 Query: 330 XXXXXXXXXEGSRQPFDRRRLAAAAEQID-------------KAGFTRADLVEIVGAQLP 376 + SR D R + A + + ++ F + + G +L Sbjct: 408 LASIAQLAADSSR---DERPIFHAEQHLPGLIDEVLDTVVRRRSYFRASHVATAAGGKLQ 464 Query: 377 -------VDTEQSPRRLVEAAVEEIGILL--------------TAARQPHQREGHDRFTL 415 + + +VEA V + I L TA + R + +T Sbjct: 465 GYRFASLAERDLIHATVVEAIVRDKAIALNDFDILELPEALKNTAGKARDTRADSELYTT 524 Query: 416 DRIL-AEEAALLQLVD-----AQDIRAELWVKERDTEG---LSPDQKRVVENIATSPWLV 466 IL E+ AL L + A + + E + E L+ Q+ + + T L Sbjct: 525 QDILDTEDKALAALNEPVAAFAPSAAIDKALDEHEAEAGFRLNSGQESMARYLLTCGTLA 584 Query: 467 QPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKAL- 525 PAG GKT S+R +A + + V LAP+ A DV ++ D YTI K Sbjct: 585 ATGVGPAGTGKTASMRLVANVWANQGR-NVIGLAPSAQAADVLSKDLGFDA-YTIDKLTY 642 Query: 526 -----------HELDKGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDA 574 H L +++ D+++VDEA M +GD Sbjct: 643 TWRGNHPTKPGHSLKDLPVSINSGDMIIVDEAGMASTPNIGSLLEIAEEAGAVVRFIGDH 702 Query: 575 HQLAPVKARGGMF-AQLCADLPWAQQLSEVWRMR-DPEERTASLALRDGGPAPVRRAVEW 632 QL V+ GG+F A + A QLSEV R D E+ SL LR+G + ++ Sbjct: 703 KQLGAVE-NGGLFGAMVNASGRTDNQLSEVVRFGGDSEQSATSLRLREGDSS----TFDF 757 Query: 633 YRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQP 692 Y ++ G Y D ++G+ +LLI T LN I IA + Sbjct: 758 YLERGWVNGGARSDMLDKAAADYLADISSGKTSLLIAATNRDVAELNETIRAHYIANGEV 817 Query: 693 AVIA----ARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNN 748 +RG + VGD I++R+N AT + + NG + A+ + Sbjct: 818 DTTVEAQLSRGEKAGVGDTILARKNQTFYDDETATSTR-----INNGTLLTVTAIAEDGS 872 Query: 749 RVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAM 808 + AR G DY+ +++ GYA TVH AQG T D T AV+ + RA LYVA+ Sbjct: 873 -ITARNNTTGEELCLPADYVHDNVQLGYAATVHRAQGSTVDCTRAVIDHHVDRAGLYVAL 931 Query: 809 TRGRSANTAY 818 TRG+ AN Y Sbjct: 932 TRGKLANHIY 941 >tr|Q3L956|Q3L956_RHOE4 Tax_Id=234621 SubName: Full=Putative uncharacterized protein;[Rhodococcus erythropolis] Length = 1422 Score = 184 bits (467), Expect = 5e-44 Identities = 225/819 (27%), Positives = 327/819 (39%), Gaps = 94/819 (11%) Query: 103 VHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVTG 162 V G+DL F KS+SL+ L V L ++ YTR G Sbjct: 183 VAGYDLVFTPAKSISLLWGLGDPRVKEAIEAAHKQAVDES-LGWIEDEVTYTR--RGKAG 239 Query: 163 EKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAAG 222 + +++ GL+A + H +R GDP+LHTH V NR A+ + +IDG Y A AA Sbjct: 240 AR-VIKAEGLLAARFDHWDNRVGDPNLHTHCAVLNR-VFAEDKWTTIDGRMFYRSAVAAS 297 Query: 223 VIYQATLRRELHQSLGFEWLP-VDPATG---MAEVAGIAPESVTAWSQRSSQLREWA--A 276 Y + + + LG + P D G + EV GI + +S+R + + A A Sbjct: 298 ERYNTRVADLVARKLGVTFAPRADTPVGKQPVYEVEGIPISLIEEFSRRQAIVDRQAELA 357 Query: 277 GNLALADGQN----LSPAQLSAAQKATRPAKPEQLSFAELRAAWRADERGVRLD-DXXXX 331 G+N + AQ A TR AK S AELRA W R + +D Sbjct: 358 NEYLERHGKNPPKKVQYAQAQQATLDTRNAKNPPRSMAELRAEWDERARAIVVDTSPQEL 417 Query: 332 XXXXXXXEGSRQPFDRRRL------------------------AAAAEQIDKAGFTR-AD 366 R PF L A Q+ FT D Sbjct: 418 VDLAQTGHDKRPPFGPEDLPELISTVEEDLSRKVGTWTVYSLTAEVQRQVRAFSFTDDLD 477 Query: 367 LVEIVGAQ---------LPVDTE--QSPRRLVEAAVEEIGILLTAARQPHQREGHDRFTL 415 L V A +PV TE +P L E + L T R R+T Sbjct: 478 LDVYVKAAVETLVKNHCIPVFTEIYSAPESLSERVEGGLVRLHTVDRTTM------RYTS 531 Query: 416 DRILAEEAALLQLVDAQD--------IRAELWVKERDTE--------GLSPDQKRVVENI 459 + +LA E + DA IR ++ E++T L DQ ++E+ Sbjct: 532 ESVLAAEKYMRNKADAASELTVPDRVIRRQIRRIEKETRKEIDVKDFALGNDQIAMIEHF 591 Query: 460 ATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGY 519 T+ V AGAGKTT+ + +A A + +V L P+ A DV E + G Sbjct: 592 LTAKTKVAVAVGAAGAGKTTAAKVVAR-AWEQTNGKVIALGPSAKAADVLGAEIDVE-GR 649 Query: 520 TIAKALHELDKGTLT-LGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLA 578 TIA L G T + DL++VDEA M L+GD QLA Sbjct: 650 TIADILTRDQHGLATGIEKGDLLLVDEAGMASARNLADLTRIATQSGAVVRLLGDPLQLA 709 Query: 579 PVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDR 638 V++ GG+ L A+ A LS++ R + E ASL LRDG + A+ WY+ DR Sbjct: 710 SVES-GGVLRDL-AERTDAPFLSKIHRFKTVGEAAASLQLRDGDES----ALAWYQKEDR 763 Query: 639 LHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRI---HRDIIAADQPAVI 695 + Y D + L++ T ++ LN + +RD ++ Sbjct: 764 IREAMKHELPDKVFAAYVADVEEEKVTLMVAPTNDLVRELNLKATAYYRDKGTVTGDGIL 823 Query: 696 AARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRL 755 A G ++GD++++R+N+ V D D K V NG+ W I V + + Sbjct: 824 LADGLEGSLGDVVVTRKNNSKYVVKD--DQGKRTGRVNNGDLWTIVEVGVDGSLRLENNV 881 Query: 756 HDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSAN 815 G R DY+ +++ GYA TVH +QG+T H + R YVAMTRG+ N Sbjct: 882 -SGGRVVVAADYVADNVQLGYAATVHRSQGMTVGACHVLTDSGMDRQGFYVAMTRGKQKN 940 Query: 816 TAYL--HERIAGENEHR---QPNGVHIPRRGTAKEAAQR 849 AY E + EHR P + + A++ +QR Sbjct: 941 IAYAASDELPDWDFEHRPDEHPGALGVISGIIARDGSQR 979 >tr|B3GW66|B3GW66_9CORY Tax_Id=169292 (traA)SubName: Full=TraA Protein;[Corynebacterium aurimucosum] Length = 1492 Score = 183 bits (465), Expect = 8e-44 Identities = 207/789 (26%), Positives = 321/789 (40%), Gaps = 91/789 (11%) Query: 101 RGVHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPV 160 + V GFDLTF KSVS++ AL + + + + + +TR Sbjct: 172 QSVSGFDLTFSPAKSVSVVWAL-SDEETARRIEKLHHQAVKEAMAWAEDNVFFTRSGKQ- 229 Query: 161 TGEKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKA 220 ++ ++ G++A ++H +RAGDP LH+HV+V N+ DG+ +S+D +L+ +A+A Sbjct: 230 --GREQVKTKGVIASEFKHYDTRAGDPDLHSHVLVSNKVQAEDGRWLSLDSKALHKQAQA 287 Query: 221 AGVIYQATLRRELHQSLGFEWLPVDPATGMA---EVAGIAPESVTAWSQR---SSQLREW 274 Y + L L +G+ + D E+ G++ + ++S+R + + + Sbjct: 288 ISHRYDSILNTLLSNDMGYSFTARDHGVNKEPTWEIEGVSESLMESFSKRRRGAEPVYKR 347 Query: 275 AAGNLALADGQNLSPAQLSAA-QKA---TRPAKPEQLSFAELRAAWRADERGVRLDDXXX 330 A G + ++ Q+A TR AK E S +ELRA W+ + V D Sbjct: 348 LVDEFVAARGTTPNSVEVGRLWQQAILETRDAKREPESLSELRAGWKNE---VSARDNGQ 404 Query: 331 XXXXXXXXEGSRQPFDRRRLAAAAEQID-------------KAGFTRADLVEIVGAQLP- 376 + D R L A E + ++ F + + G +L Sbjct: 405 EELASIAQLSANSGHDERPLFDAHEHLSGLIDDVLATVTRRRSYFRTSHVATAAGGKLQG 464 Query: 377 ------VDTEQSPRRLVEAAVEEIGILL--------------TAARQPHQREGHDRFTLD 416 + + +VEA V + I L TA + R + FT Sbjct: 465 YRFASLAERDLIHATVVEAIVRDKAIALNDFDVLELPESLKNTAGQARDTRADSELFTTQ 524 Query: 417 RILAEE----AALLQLVDA----QDIRAELWVKERDTE-GLSPDQKRVVENIATSPWLVQ 467 IL E AAL + V A + I L ER+ L+ Q+ + + T L Sbjct: 525 DILDTEDKALAALNEPVAAFAPSRAIDEALDGHEREAGFRLNAGQESMARYLLTCGTLAA 584 Query: 468 PLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKAL-- 525 PAG GKT S+R +A + V LAP+ A DV + E G +TI K Sbjct: 585 TGVGPAGTGKTASMRLVANVWANEGR-NVIGLAPSAQAADV-LSEDLGFDAFTIDKLTYT 642 Query: 526 ----------HELDKGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAH 575 H L +++ D+++VDEA M +GD Sbjct: 643 WRGNHPTKPGHSLKDLPVSINAGDMIIVDEAGMASTPNIGSLLEIAEEAGAVVRFIGDHK 702 Query: 576 QLAPVKARGGMF-AQLCADLPWAQQLSEVWRMR-DPEERTASLALRDGGPAPVRRAVEWY 633 QL V+ GG+F A + A QLSEV R D E+ SL LR+G R ++Y Sbjct: 703 QLGAVE-NGGLFGAMVNAAERTDNQLSEVVRFGGDREQSATSLRLREGD----RSTFDFY 757 Query: 634 RTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQPA 693 ++ G Y D ++G+ +LLI T LN I IA Sbjct: 758 SERGWVNGGARSDMLDKAAADYLADISSGKTSLLIAATNRDVAELNETIRAHYIAHSVVD 817 Query: 694 VIA----ARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNR 749 +RG + +GD I++R+N AT + + NG + + N Sbjct: 818 TTVEAQLSRGEKAGLGDTILARKNQTFYDDETATSTR-----INNGTLMTVTGIAE-NGS 871 Query: 750 VAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMT 809 + AR G DY+ +++ GYA TVH AQG T D T AV+ + RA LYVA+T Sbjct: 872 ITARNQTTGDELCLPADYVHDNVQLGYAATVHRAQGSTVDCTRAVIDHHVDRAGLYVALT 931 Query: 810 RGRSANTAY 818 RG+ AN Y Sbjct: 932 RGKIANHIY 940 >tr|A3FG49|A3FG49_9PSEU Tax_Id=346045 SubName: Full=ORF16;[Amycolatopsis benzoatilytica] Length = 1558 Score = 183 bits (465), Expect = 8e-44 Identities = 233/812 (28%), Positives = 323/812 (39%), Gaps = 110/812 (13%) Query: 94 SGRAFGNRGVHGFDLTFCAPKSVSLIRA--LRAG-DVXXXXXXXXXXXXXXXXLEYLAAH 150 + R G + V +D TF KSVS+ + AG L YL H Sbjct: 137 AARTDGRKAVAYYDFTFSPVKSVSVYYTALVSAGAHEAADKVLKAHREAVDVALGYLEKH 196 Query: 151 AGYTRV--HNPVTGEKDL---LRLPGLVAIAYQHETSRAGDPHLHTHVIVPNR-QARADG 204 Y R H + + R GL I + H TSRA +P LH H V NR Q +DG Sbjct: 197 GAYVRTGYHGKTVNGRSVGKYERATGLNVIKFDHSTSRANEPQLHCHAAVLNRVQTESDG 256 Query: 205 QLVSIDGTSLYHEAKAAGVIYQATLRRELHQSLGFEWLPVDPATGMAEVAGIAPESVTAW 264 + ++D +A V Y+ L +L LG + P E+ G+ P T Sbjct: 257 VIRALDAKGFRPIKEAVSVAYERALEDKLTAELGVRFAQ-RPDGKAREILGVDPTLCTEA 315 Query: 265 SQRSSQLREWAAGNL-ALADGQNLSPAQLSAAQKA--------TRPAKPEQLSFAELRAA 315 S R +Q+ E +A + A D P+ +AA+KA TR AK + LRA Sbjct: 316 SSRRAQVEERSAELIEAYVDRHGREPS--AAARKAIAQMATLDTREAKGPEAGPQALRA- 372 Query: 316 WRADERGVRLDDXXXXXXXXXXX-------EGSRQPFDRRR---LAAAAEQIDKA--GFT 363 W DER RL D + P R R L AA E + +T Sbjct: 373 W-GDERAGRLADTLDQVEAAAAKIEREGHPDAKVMPDQRDRQAILRAAVEDVQAQYPTWT 431 Query: 364 RADLVEIVGAQ---LPVDTEQSPR------RLVEAAVEEIGILLTAARQPH------QRE 408 +LV V Q LP E+ P R AA + G+L A P QR Sbjct: 432 LGNLVAAVDRQVISLPCTPEERPAYIEGMAREALAAGNDYGVLTLTAPDPVAVPTPLQRP 491 Query: 409 GHDR----------FTLDRILAEEAALLQLVDAQDIRA------ELWVKERDTEGLSPDQ 452 R +T ++ L E ++ Q A E+ E L+ DQ Sbjct: 492 DDGRLIYRPHMDEVYTTEKHLDTERRIVVGARQQTAPAISGPELEMLKVELSATTLTEDQ 551 Query: 453 KRVVENIATSPWLVQPLSAPAGAGKTTSLRALATMARRRHTARVFVLAPTGTAVDVAIRE 512 + V I +S L PAG GK+ ++ L + RV LA + A DV E Sbjct: 552 RAAVLGIVSSGRAADVLIGPAGTGKSYTVATLTQAWSQNTGGRVMGLATSQRATDVLNSE 611 Query: 513 GAGDVGY-----------TIAKALHELDKGTLTLGHLDLVVVDEAAMVGXXXXXXXXXXX 561 G + T +A ++ G DL VVDEA M G Sbjct: 612 GLDSINTSQFLKRFTPDETTGEARDQVRPG-------DLFVVDEAGMSGTDELARISALV 664 Query: 562 XXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDG 621 K + GD QLA VKA GGM +L A+ A +L V R E+ AS+ LR G Sbjct: 665 EQGGGKLLYTGDHRQLAAVKA-GGML-ELLANDNGAYELESVRRFEADWEKQASIRLRVG 722 Query: 622 GPAPVRRAVEWYRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRR 681 + + Y RL G Y DT G ++LLI + + A L+ Sbjct: 723 DTSVLSE----YDDRGRLRGGTMEEMREAAVRGYVADTLEGLDSLLIVRSNDDATDLSAE 778 Query: 682 IHRDIIA---ADQPAVIAAR-GHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNR 737 I ++ D + AR G+ I+VGD+I +R+N+ + +++ G V N Sbjct: 779 IRAQLVELGKVDSEVLTQARDGNLISVGDVIQARKNNYDI------EVQGGRGMVVNREV 832 Query: 738 WRIYAVDPGNNRVAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGE 797 + + VD +A DGA A Y+ +H+T YA T H+AQG T DT H + + Sbjct: 833 YTVRGVDDRGRLIAETA--DGATAYLPDSYVDQHVTLAYASTKHAAQGRTVDTGHTLSPD 890 Query: 798 NTTRALLYVAMTRGRSANTAYL-HERIAGENE 828 YV+MTRG+ NTAYL ER A E+E Sbjct: 891 -------YVSMTRGKQCNTAYLVTERPADEHE 915 >tr|C4DRT0|C4DRT0_9ACTO Tax_Id=446470 SubName: Full=TrwC relaxase;[Stackebrandtia nassauensis DSM 44728] Length = 1623 Score = 180 bits (457), Expect = 7e-43 Identities = 208/789 (26%), Positives = 303/789 (38%), Gaps = 92/789 (11%) Query: 102 GVHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNPVT 161 GV GFDL F KS +L+ AL +E L HA +TR T Sbjct: 163 GVAGFDLVFAPVKSAALVWALHPDVRVRQQVKAAHDAAVDSVMELLEEHAAHTRAG---T 219 Query: 162 GEKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGTSLYHEAKAA 221 G L GL+A + H SRAGDP+LHTH+ V N+ DG+ S+D +Y AA Sbjct: 220 GGVAQLDTKGLIAARFDHFDSRAGDPNLHTHIPVANKVLGRDGKWRSLDARGIYAMTVAA 279 Query: 222 GVIYQATLRRELHQSLGFEWLPVDPATG---MAEVAGIAPESVTAWSQRSSQLREWAAGN 278 Y E+ LG + + A + E+ GI + +S+R L Sbjct: 280 SEHYNTRFETEMVHRLGVTFTDREAAGSKRPVREIDGIPAAMIKHFSRRRLDLEARYKQL 339 Query: 279 LAL--ADGQNLSPAQL--SAAQKAT---RPAKPEQLSFAELRAAWRAD------------ 319 +A AD PA + A++AT RP KP S ++R W AD Sbjct: 340 IAAYRADHGTDPPAAICHKLARQATLDTRPDKPTLRSLKQMRQEWEADLIHTFGGKALRH 399 Query: 320 -------------ERGVRLDDXXXXXXXXXXXEGSRQP-FDRRRLAAAAEQIDKAGF--- 362 + D+ S+ + R L A AE+ +A F Sbjct: 400 ITSAVPTRSAVAEAVSLSTDEAETIAASVVRTVASQHSTWTRWNLHAEAERTLRAAFRFP 459 Query: 363 ---TRADLVEIVGAQLPVDTEQSPRRLVEAAVEEIGILLTA-ARQPHQREGHDRFTLDRI 418 VE+V A L S R + V+E +L A + G R+T + Sbjct: 460 TREAHDHAVEVVMA-LATSPAHSIRIDAPSLVDEPDVLRRADGESVFHQHGSTRYTSQAV 518 Query: 419 LAEEAALLQL--------VDAQDIRAELWVKERDTEGLSPDQKRVVENIATSPWLVQPLS 470 L E LL + A + L + + L P Q+ + AT+ L+ Sbjct: 519 LDAEQRLLGAAKTPTDKGLSAGFVTGVLDGFDTTSHQLDPGQRHLAAGFATTDRLLAVGI 578 Query: 471 APAGAGKTTSLRALA-TMARRRHTARVFVLAPTGTAVDVAIREGAGDVGYTIAKALHELD 529 P GAGKTT+++A A T+ H + AV A + D + K L E Sbjct: 579 GPGGAGKTTAMKAYAHTLTTAGHRLIPLATSANSAAVLAADLDTPAD---NLHKFLWEHS 635 Query: 530 KGT-----------------LTLGHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVG 572 +G L D+V+VDEA G + L+G Sbjct: 636 RGHHANALKHGDPVPESAQFFALKPGDVVLVDEAGQAGTFALDQLITIAKRHGAQVRLLG 695 Query: 573 DAHQLAPVKARGGMFAQLCADLPWAQQLSEVWRMRDPEERTASLALRDGGPAPVRRAVEW 632 D QL+ V++ G + +L A A +L + R DP E A+L LR+G + ++ Sbjct: 696 DHRQLSAVESGGAL--RLIAAEAGAFELDTLHRFSDPAEARATLKLREGDAS----GLDH 749 Query: 633 YRTHDRLHTGDXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAADQ- 691 Y R+ G ++RD + GR +++I T AL R D I A Sbjct: 750 YEIAGRIFGGSKDAMIEKAYTAWHRDLSTGRTSVMIAATNADVTALAARARTDRIRAGHV 809 Query: 692 --PAVIAARGHRIAVGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNR 749 V G+ VGD +I+R N L + +G D VRNG+ W + + Sbjct: 810 KTTGVDLHDGNTAGVGDWVITRHNHRGLR------LNRGKDFVRNGDIWTVIRHHRDGSL 863 Query: 750 VAARRLHDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMT 809 H G DY+ E++ YA T QG T DT HA++ ++ R LYVA + Sbjct: 864 SLRHHDHRGT-VRIPADYVAEYVELAYATTATRIQGATVDTAHALVTDDMAREHLYVAAS 922 Query: 810 RGRSANTAY 818 R R + Y Sbjct: 923 RARHNTSLY 931 >tr|D0YT16|D0YT16_9ACTO Tax_Id=596328 SubName: Full=DNA primase catalytic core;[Mobiluncus mulieris 28-1] Length = 1125 Score = 180 bits (456), Expect = 9e-43 Identities = 225/783 (28%), Positives = 307/783 (39%), Gaps = 119/783 (15%) Query: 100 NRGVHGFDLTFCAPKSVSLIRALRAGDVXXXXXXXXXXXXXXXXLEYLAAHAGYTRVHNP 159 +R VHGFDLTF K +S++ AL D L L A +TR Sbjct: 135 SRAVHGFDLTFAPSKDISVLWALSDEDTRAVMEQCHREAIEQT-LAMLEDKALFTRRGK- 192 Query: 160 VTGEKDLLRLPGLVAIAYQHETSRAGDPHLHTHVIVPNRQARADGQLVSIDGT-SLYHEA 218 G + ++ GL+A + H +R GDPHLHTHV+V NR DG+ +ID L Sbjct: 193 --GGVEQVKTGGLIAAGFDHWDTREGDPHLHTHVVVVNRVQGPDGKWRTIDSRHGLMPAV 250 Query: 219 KAAGVIYQATLRRELHQSLGFEWLPVDPATGMAEVAGIAP---ESVTAWSQRSSQ-LREW 274 Y + + L + LGF+W V V GI + V +S R Q LRE Sbjct: 251 VGLSEAYDSAIMDRLTERLGFDWTEVSTTVSGKPVWGINGLNRDLVKEFSTRRGQILRER 310 Query: 275 AAGNLALADGQNLSPAQLSAAQ----KATRPAKPEQLSFAELRAAW---RADERGVR-LD 326 G D + S + + TR + L A+ +A GV +D Sbjct: 311 GDGATREDDKKAWSDTRKDKHHHQLGELTRQWRERALRILGKNPAFTPIQATATGVASID 370 Query: 327 DXXXXXXXXXXXEGS------------------RQPFDRRRLAAAAEQIDKAGFTRADLV 368 + E + R +D+R+ A + +DKA R V Sbjct: 371 EIAVMVIDNLQKERATWGIWNMQAEAHRLLRKYRYHYDQRQ-AVVDQVVDKA---RELTV 426 Query: 369 EIVGAQLPVDTEQSPRRLVEAAVEEIGILLTAARQPHQREGHDRFTLDRILAEEAALLQL 428 +I G TE + AV DR+T RIL E LL Sbjct: 427 QITGGDTRPVTETFQQENTAPAVSAA----------------DRYTTRRILDAERLLLNG 470 Query: 429 VDAQDIRA----------ELWVKERDTEGLSPDQKRVVENIATSPWLVQPLSAPAGAGKT 478 D+ A E WV E D L +Q I TS V L PAGAGKT Sbjct: 471 NDSPQGPALQYDQANQALEAWVSE-DGFKLDSEQIGAAFEIVTSGRAVDILVGPAGAGKT 529 Query: 479 TSLRALATMARRRHTARVFVLAPTGTAVDV---AIREGAGDVGYTIAKALHELDKGTLTL 535 T+L AL A + V AP+ A V A + A +T+ + + Sbjct: 530 TTLSALVA-AWKTAGVPVAGFAPSAAAAKVLAEATGQAATIASWTVKPQAFQPGQ----- 583 Query: 536 GHLDLVVVDEAAMVGXXXXXXXXXXXXXXXXKTVLVGDAHQLAPVKARGGMFAQLCADLP 595 LV+VDEAAM K +LVGD HQL+ V+A GG F+ L Sbjct: 584 ----LVIVDEAAMSATLDLAALAQATREAGAKLLLVGDHHQLSAVEA-GGAFSMLVRHNT 638 Query: 596 WAQQ---------------LSEVWRMRDPEERTASLALRDGGPAPVRRAVEWYRTHDRLH 640 + L V R R P E ASL LR+G + AV+ Y +DR+ Sbjct: 639 TTIRDGDTGRVITQKTPPTLEGVRRFRQPWEAGASLLLREGK----KEAVKDYLLNDRIK 694 Query: 641 TG-DXXXXXXXXXXXYNRDTAAGRNALLICDTTEMADALNRRIHRDIIAA---DQPAVIA 696 G D + D AG+ +L++ + LN +I A D Sbjct: 695 GGGDTSQVAQAILKAWWADYTAGKTSLMLAHDNTSVNTLNEGARELMIQAGIVDTSKETT 754 Query: 697 ARGHRIA-VGDLIISRRNDPTLPVFDATDIKKGADPVRNGNRWRIYAVDPGNNRVAARRL 755 RG + A GD I++R ND TL V NG + + ++ A R Sbjct: 755 LRGDQAAGAGDTIVTRLNDKTLGVI-------------NGQVFTVTRINRDGGIDA--RD 799 Query: 756 HDGARAAFTGDYLREHITYGYAITVHSAQGVTADTTHAVLGENTTRALLYVAMTRGRSAN 815 G +Y+++++ GYA TVH AQG T DT H ++ E TR LYVAMTRGR+ N Sbjct: 800 QQGFTHRLPAEYVKKNVELGYAGTVHRAQGRTVDTVHTMVTETMTRQQLYVAMTRGRANN 859 Query: 816 TAY 818 TA+ Sbjct: 860 TAW 862 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.319 0.133 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 6,415,430,934 Number of extensions: 253537119 Number of successful extensions: 701277 Number of sequences better than 10.0: 980 Number of HSP's gapped: 703984 Number of HSP's successfully gapped: 1192 Length of query: 934 Length of database: 3,846,993,858 Length adjustment: 147 Effective length of query: 787 Effective length of database: 2,189,539,017 Effective search space: 1723167206379 Effective search space used: 1723167206379 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 85 (37.4 bits)