BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_3655 (105 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HL95|B2HL95_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 106 7e-22 tr|P95244|P95244_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 76 1e-12 tr|C6DNS0|C6DNS0_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 76 1e-12 tr|A5U537|A5U537_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 76 1e-12 tr|A5WPW2|A5WPW2_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 76 1e-12 tr|A4KJA0|A4KJA0_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 76 1e-12 tr|A2VK80|A2VK80_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 76 1e-12 tr|Q73Y23|Q73Y23_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 65 2e-09 tr|A0QEC0|A0QEC0_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 50 6e-05 >tr|B2HL95|B2HL95_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 105 Score = 106 bits (265), Expect = 7e-22 Identities = 55/94 (58%), Positives = 55/94 (58%) Query: 12 DAVAAKRGESGLLCGLSVPLSWGTAVPPDDYDHWXXXXXXXXXXXXXXXXXXXXXXTDXX 71 DAVAAKRGESGLLCGLSVPLSWGTAVPPDDYDHW TD Sbjct: 12 DAVAAKRGESGLLCGLSVPLSWGTAVPPDDYDHWAPEPEEGAEAVVEENVDAAAAGTDEW 71 Query: 72 XXXXXXXXXXXXXXXPHFEMPRTSSVIPNSPAAG 105 PHFEMPRTSSVIPNSPAAG Sbjct: 72 DEWAEWREWEAANAEPHFEMPRTSSVIPNSPAAG 105 >tr|P95244|P95244_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 108 Score = 75.9 bits (185), Expect = 1e-12 Identities = 45/97 (46%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 12 DAVAAKRGESGLLCGLSVPLSWGTAVPPDDYDHWXXXXXXXXXXXXXXXXXXXXXXT--D 69 DAV AKR ESG+L GLSVPLSWG AVPPDDYDHW D Sbjct: 12 DAVVAKRAESGMLGGLSVPLSWGVAVPPDDYDHWAPAPEDGADVDVQAAEGADAEAAAMD 71 Query: 70 XXXXXXXXXXXXXXXXXPHFEMPR-TSSVIPNSPAAG 105 P FE+PR +SSVIP+SPAAG Sbjct: 72 EWDEWQAWNEWVAENAEPRFEVPRSSSSVIPHSPAAG 108 >tr|C6DNS0|C6DNS0_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 100 Score = 75.9 bits (185), Expect = 1e-12 Identities = 45/97 (46%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 12 DAVAAKRGESGLLCGLSVPLSWGTAVPPDDYDHWXXXXXXXXXXXXXXXXXXXXXXT--D 69 DAV AKR ESG+L GLSVPLSWG AVPPDDYDHW D Sbjct: 4 DAVVAKRAESGMLGGLSVPLSWGVAVPPDDYDHWAPAPEDGADVDVQAAEGADAEAAAMD 63 Query: 70 XXXXXXXXXXXXXXXXXPHFEMPR-TSSVIPNSPAAG 105 P FE+PR +SSVIP+SPAAG Sbjct: 64 EWDEWQAWNEWVAENAEPRFEVPRSSSSVIPHSPAAG 100 >tr|A5U537|A5U537_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 108 Score = 75.9 bits (185), Expect = 1e-12 Identities = 45/97 (46%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 12 DAVAAKRGESGLLCGLSVPLSWGTAVPPDDYDHWXXXXXXXXXXXXXXXXXXXXXXT--D 69 DAV AKR ESG+L GLSVPLSWG AVPPDDYDHW D Sbjct: 12 DAVVAKRAESGMLGGLSVPLSWGVAVPPDDYDHWAPAPEDGADVDVQAAEGADAEAAAMD 71 Query: 70 XXXXXXXXXXXXXXXXXPHFEMPR-TSSVIPNSPAAG 105 P FE+PR +SSVIP+SPAAG Sbjct: 72 EWDEWQAWNEWVAENAEPRFEVPRSSSSVIPHSPAAG 108 >tr|A5WPW2|A5WPW2_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 100 Score = 75.9 bits (185), Expect = 1e-12 Identities = 45/97 (46%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 12 DAVAAKRGESGLLCGLSVPLSWGTAVPPDDYDHWXXXXXXXXXXXXXXXXXXXXXXT--D 69 DAV AKR ESG+L GLSVPLSWG AVPPDDYDHW D Sbjct: 4 DAVVAKRAESGMLGGLSVPLSWGVAVPPDDYDHWAPAPEDGADVDVQAAEGADAEAAAMD 63 Query: 70 XXXXXXXXXXXXXXXXXPHFEMPR-TSSVIPNSPAAG 105 P FE+PR +SSVIP+SPAAG Sbjct: 64 EWDEWQAWNEWVAENAEPRFEVPRSSSSVIPHSPAAG 100 >tr|A4KJA0|A4KJA0_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 100 Score = 75.9 bits (185), Expect = 1e-12 Identities = 45/97 (46%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 12 DAVAAKRGESGLLCGLSVPLSWGTAVPPDDYDHWXXXXXXXXXXXXXXXXXXXXXXT--D 69 DAV AKR ESG+L GLSVPLSWG AVPPDDYDHW D Sbjct: 4 DAVVAKRAESGMLGGLSVPLSWGVAVPPDDYDHWAPAPEDGADVDVQAAEGADAEAAAMD 63 Query: 70 XXXXXXXXXXXXXXXXXPHFEMPR-TSSVIPNSPAAG 105 P FE+PR +SSVIP+SPAAG Sbjct: 64 EWDEWQAWNEWVAENAEPRFEVPRSSSSVIPHSPAAG 100 >tr|A2VK80|A2VK80_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 108 Score = 75.9 bits (185), Expect = 1e-12 Identities = 45/97 (46%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 12 DAVAAKRGESGLLCGLSVPLSWGTAVPPDDYDHWXXXXXXXXXXXXXXXXXXXXXXT--D 69 DAV AKR ESG+L GLSVPLSWG AVPPDDYDHW D Sbjct: 12 DAVVAKRAESGMLGGLSVPLSWGVAVPPDDYDHWAPAPEDGADVDVQAAEGADAEAAAMD 71 Query: 70 XXXXXXXXXXXXXXXXXPHFEMPR-TSSVIPNSPAAG 105 P FE+PR +SSVIP+SPAAG Sbjct: 72 EWDEWQAWNEWVAENAEPRFEVPRSSSSVIPHSPAAG 108 >tr|Q73Y23|Q73Y23_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 143 Score = 65.1 bits (157), Expect = 2e-09 Identities = 38/94 (40%), Positives = 43/94 (45%), Gaps = 10/94 (10%) Query: 12 DAVAAKRGESGLLCGLSVPLSWGTAVPPDDYDHWXXXXXXXXXXXXXXXXXXXXXXTDXX 71 D V+A RGESG+L GLSVPL WG AVPPDDYDHW Sbjct: 60 DTVSAVRGESGVLGGLSVPLKWGVAVPPDDYDHWAPKPEASAEAVEETAEMPRPTAVADG 119 Query: 72 XXXXXXXXXXXXXXXPHFEMPRTSSVIPNSPAAG 105 +PRT+ VIP+SPAAG Sbjct: 120 VWSGWDGE----------AVPRTAGVIPHSPAAG 143 >tr|A0QEC0|A0QEC0_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 73 Score = 50.4 bits (119), Expect = 6e-05 Identities = 30/83 (36%), Positives = 34/83 (40%), Gaps = 10/83 (12%) Query: 23 LLCGLSVPLSWGTAVPPDDYDHWXXXXXXXXXXXXXXXXXXXXXXTDXXXXXXXXXXXXX 82 +L GLSVPL WG AVPPDDYDHW Sbjct: 1 MLGGLSVPLKWGVAVPPDDYDHWAPKPEASAEAVEETAEMPRPTAVADGVWSGWDGE--- 57 Query: 83 XXXXPHFEMPRTSSVIPNSPAAG 105 +PRT+ VIP+SPAAG Sbjct: 58 -------AVPRTAGVIPHSPAAG 73 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.314 0.133 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 463,238,404 Number of extensions: 7993113 Number of successful extensions: 10614 Number of sequences better than 10.0: 9 Number of HSP's gapped: 10620 Number of HSP's successfully gapped: 9 Length of query: 105 Length of database: 3,846,993,858 Length adjustment: 73 Effective length of query: 32 Effective length of database: 3,023,904,039 Effective search space: 96764929248 Effective search space used: 96764929248 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 75 (33.5 bits)