BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_3819 (80 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HNH6|B2HNH6_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 112 1e-23 tr|A0PU43|A0PU43_MYCUA Tax_Id=362242 SubName: Full=Putative unch... 109 1e-22 tr|Q8VJI1|Q8VJI1_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 94 4e-18 tr|A2VKJ1|A2VKJ1_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 92 1e-17 tr|Q73XM0|Q73XM0_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 83 1e-14 tr|A0QDE4|A0QDE4_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 82 3e-14 tr|A0R1B6|A0R1B6_MYCS2 Tax_Id=246196 SubName: Full=Putative unch... 67 6e-10 tr|A1TCD9|A1TCD9_MYCVP Tax_Id=350058 SubName: Full=Putative unch... 66 1e-09 tr|A4T2P9|A4T2P9_MYCGI Tax_Id=350054 SubName: Full=Putative unch... 64 4e-09 tr|Q1B5W9|Q1B5W9_MYCSS Tax_Id=164756 SubName: Full=Putative unch... 56 1e-06 tr|A3Q2L3|A3Q2L3_MYCSJ Tax_Id=164757 SubName: Full=Putative unch... 56 1e-06 tr|A1UJ67|A1UJ67_MYCSK Tax_Id=189918 SubName: Full=Putative unch... 56 1e-06 tr|B1MMU1|B1MMU1_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 52 2e-05 tr|Q5Z080|Q5Z080_NOCFA Tax_Id=37329 SubName: Full=Putative uncha... 52 3e-05 tr|C1AVR8|C1AVR8_RHOOB Tax_Id=632772 SubName: Full=Putative unch... 49 1e-04 tr|Q0SGX8|Q0SGX8_RHOSR Tax_Id=101510 SubName: Full=Putative unch... 49 2e-04 tr|C1A1P7|C1A1P7_RHOE4 Tax_Id=234621 SubName: Full=Putative unch... 49 2e-04 tr|C3JRS0|C3JRS0_RHOER Tax_Id=596309 SubName: Full=Putative unch... 49 2e-04 tr|C6WQ39|C6WQ39_ACTMD Tax_Id=446462 SubName: Full=Putative unch... 42 0.029 tr|C7MZX1|C7MZX1_SACVD Tax_Id=471857 SubName: Full=Putative unch... 35 3.5 >tr|B2HNH6|B2HNH6_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 80 Score = 112 bits (281), Expect = 1e-23 Identities = 56/80 (70%), Positives = 57/80 (71%) Query: 1 VSVMEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAATXXXXXXXX 60 +SVMEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAAT Sbjct: 1 MSVMEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAATDEAVGDAH 60 Query: 61 XXXXXXXXXXXXXXXASGTW 80 ASGTW Sbjct: 61 GHGGHGSSEFSVGGGASGTW 80 >tr|A0PU43|A0PU43_MYCUA Tax_Id=362242 SubName: Full=Putative uncharacterized protein;[Mycobacterium ulcerans] Length = 77 Score = 109 bits (272), Expect = 1e-22 Identities = 54/77 (70%), Positives = 54/77 (70%) Query: 4 MEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAATXXXXXXXXXXX 63 MEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAAT Sbjct: 1 MEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAATDEAVGDAHGHG 60 Query: 64 XXXXXXXXXXXXASGTW 80 ASGTW Sbjct: 61 GHGSSEFSVGGGASGTW 77 >tr|Q8VJI1|Q8VJI1_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 80 Score = 94.4 bits (233), Expect = 4e-18 Identities = 46/80 (57%), Positives = 50/80 (62%) Query: 1 VSVMEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAATXXXXXXXX 60 +S MEIHLFFVGIPL LVVVL + +RKGPHPATY+LSE WTHPPILWAAT Sbjct: 1 MSAMEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAH 60 Query: 61 XXXXXXXXXXXXXXXASGTW 80 ASGTW Sbjct: 61 GGHGHDASEFTVGGGASGTW 80 >tr|A2VKJ1|A2VKJ1_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 77 Score = 92.4 bits (228), Expect = 1e-17 Identities = 45/77 (58%), Positives = 48/77 (62%) Query: 4 MEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAATXXXXXXXXXXX 63 MEIHLFFVGIPL LVVVL + +RKGPHPATY+LSE WTHPPILWAAT Sbjct: 1 MEIHLFFVGIPLLLVVVLSVLIWSRKGPHPATYKLSEPWTHPPILWAATDEVVGSAHGGH 60 Query: 64 XXXXXXXXXXXXASGTW 80 ASGTW Sbjct: 61 GHDASEFTVGGGASGTW 77 >tr|Q73XM0|Q73XM0_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 79 Score = 82.8 bits (203), Expect = 1e-14 Identities = 35/51 (68%), Positives = 42/51 (82%) Query: 1 VSVMEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAA 51 +S M++HLF VGIPL LV+VL + + KGPHPATY+L EKWTHPPILWAA Sbjct: 1 MSPMQMHLFIVGIPLLLVIVLSVLIWSHKGPHPATYKLGEKWTHPPILWAA 51 >tr|A0QDE4|A0QDE4_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 76 Score = 81.6 bits (200), Expect = 3e-14 Identities = 34/48 (70%), Positives = 40/48 (83%) Query: 4 MEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAA 51 M++HLF VGIPL LV+VL + + KGPHPATY+L EKWTHPPILWAA Sbjct: 1 MQMHLFIVGIPLLLVIVLSVLIWSHKGPHPATYKLGEKWTHPPILWAA 48 >tr|A0R1B6|A0R1B6_MYCS2 Tax_Id=246196 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 79 Score = 67.0 bits (162), Expect = 6e-10 Identities = 29/45 (64%), Positives = 33/45 (73%) Query: 7 HLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAA 51 H G+PL L VL IFLTRKGPHP TY++S+ WTH PILWAA Sbjct: 7 HGLIGGVPLVLFAVLALIFLTRKGPHPDTYKMSDPWTHAPILWAA 51 >tr|A1TCD9|A1TCD9_MYCVP Tax_Id=350058 SubName: Full=Putative uncharacterized protein;[Mycobacterium vanbaalenii] Length = 77 Score = 66.2 bits (160), Expect = 1e-09 Identities = 28/46 (60%), Positives = 34/46 (73%) Query: 6 IHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAA 51 +H FV IPL L +L T+KGPHPAT+++SEKWTH PILWAA Sbjct: 7 VHASFVVIPLALAGLLSLFIFTKKGPHPATFDMSEKWTHEPILWAA 52 >tr|A4T2P9|A4T2P9_MYCGI Tax_Id=350054 SubName: Full=Putative uncharacterized protein;[Mycobacterium gilvum] Length = 91 Score = 64.3 bits (155), Expect = 4e-09 Identities = 26/46 (56%), Positives = 34/46 (73%) Query: 6 IHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAA 51 +H F+ +PL L +L T+KGPHPAT+++SEKWTH PILWAA Sbjct: 21 VHASFLLVPLALAGLLSLFIFTKKGPHPATFDMSEKWTHEPILWAA 66 >tr|Q1B5W9|Q1B5W9_MYCSS Tax_Id=164756 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 89 Score = 55.8 bits (133), Expect = 1e-06 Identities = 25/44 (56%), Positives = 29/44 (65%) Query: 8 LFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAA 51 L V +PL L VL + KGPHPA+Y+LSE W H PILWAA Sbjct: 3 LVLVLVPLGLTAVLALLIFRGKGPHPASYKLSEPWRHSPILWAA 46 >tr|A3Q2L3|A3Q2L3_MYCSJ Tax_Id=164757 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 89 Score = 55.8 bits (133), Expect = 1e-06 Identities = 25/44 (56%), Positives = 29/44 (65%) Query: 8 LFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAA 51 L V +PL L VL + KGPHPA+Y+LSE W H PILWAA Sbjct: 3 LVLVLVPLGLTAVLALLIFRGKGPHPASYKLSEPWRHSPILWAA 46 >tr|A1UJ67|A1UJ67_MYCSK Tax_Id=189918 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 89 Score = 55.8 bits (133), Expect = 1e-06 Identities = 25/44 (56%), Positives = 29/44 (65%) Query: 8 LFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAA 51 L V +PL L VL + KGPHPA+Y+LSE W H PILWAA Sbjct: 3 LVLVLVPLGLTAVLALLIFRGKGPHPASYKLSEPWRHSPILWAA 46 >tr|B1MMU1|B1MMU1_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 86 Score = 52.4 bits (124), Expect = 2e-05 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%) Query: 10 FVGIPLFLV-------VVLGAIFLTRKGPHPATYELSEKWTHPPILWAATXXXXXXXXXX 62 ++G+P+++ V++G + +KGPHPATY +++ WTH PILWAA Sbjct: 9 YIGMPVWVALITPVAFVLIGLWTMRKKGPHPATYNMNDGWTHGPILWAAVDENIGDAHGH 68 Query: 63 XXXXXXXXXXXXXASGTW 80 ASG W Sbjct: 69 GHGHAGAEAIGGSASGKW 86 >tr|Q5Z080|Q5Z080_NOCFA Tax_Id=37329 SubName: Full=Putative uncharacterized protein;[Nocardia farcinica] Length = 90 Score = 51.6 bits (122), Expect = 3e-05 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 1 VSVMEIHLFFVGIPLFLVVVLGAIFLTRK---GPHPATYELSEKWTHPPILWAAT 52 +S++E L FVGIPL + + + K G P +EL +KWTH P+LW+AT Sbjct: 1 MSILETVLIFVGIPLVIYAAIAGLSFLGKPLPGEKPVHFELGQKWTHAPVLWSAT 55 >tr|C1AVR8|C1AVR8_RHOOB Tax_Id=632772 SubName: Full=Putative uncharacterized protein;[Rhodococcus opacus] Length = 86 Score = 49.3 bits (116), Expect = 1e-04 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Query: 1 VSVMEIHLFFVGIPLFLVVVLGAIFLTRK---GPHPATYELSEKWTHPPILWAA 51 +S++E L FVGIP + A+ K GP P + L E+WTH P+LW+A Sbjct: 1 MSILETVLIFVGIPALITAFFAAMSFVGKKTPGPVPPAFHLGEEWTHAPVLWSA 54 >tr|Q0SGX8|Q0SGX8_RHOSR Tax_Id=101510 SubName: Full=Putative uncharacterized protein;[Rhodococcus sp.] Length = 86 Score = 48.5 bits (114), Expect = 2e-04 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%) Query: 1 VSVMEIHLFFVGIPLFLVVVL-GAIFLTRK--GPHPATYELSEKWTHPPILWAA 51 +S++E L FVGIP + G F+ +K GP P + L E+WTH P+LW+A Sbjct: 1 MSILETVLIFVGIPALITAFFAGMSFVGKKTPGPVPPAFHLGEEWTHAPVLWSA 54 >tr|C1A1P7|C1A1P7_RHOE4 Tax_Id=234621 SubName: Full=Putative uncharacterized protein;[Rhodococcus erythropolis] Length = 103 Score = 48.5 bits (114), Expect = 2e-04 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 1 VSVMEIHLFFVGIPLFLVVVLGAI-FLTRK--GPHPATYELSEKWTHPPILWAA 51 VS++E+ L +VGIP + A FL +K GP P + L E W H P+LW+A Sbjct: 17 VSILEVVLIYVGIPALITAFFAAASFLGKKTPGPVPPAFHLGESWDHAPVLWSA 70 >tr|C3JRS0|C3JRS0_RHOER Tax_Id=596309 SubName: Full=Putative uncharacterized protein;[Rhodococcus erythropolis SK121] Length = 103 Score = 48.5 bits (114), Expect = 2e-04 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 1 VSVMEIHLFFVGIPLFLVVVLGAI-FLTRK--GPHPATYELSEKWTHPPILWAA 51 VS++E+ L +VGIP + A FL +K GP P + L E W H P+LW+A Sbjct: 17 VSILEVVLIYVGIPALITAFFAAASFLGKKTPGPVPPAFHLGESWDHAPVLWSA 70 >tr|C6WQ39|C6WQ39_ACTMD Tax_Id=446462 SubName: Full=Putative uncharacterized protein;[Actinosynnema mirum] Length = 78 Score = 41.6 bits (96), Expect = 0.029 Identities = 18/51 (35%), Positives = 29/51 (56%) Query: 1 VSVMEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAA 51 ++++E L F IPL + V+ + L RK Y ++WTHPP+ W+A Sbjct: 1 MTIVETVLVFALIPLAIFGVIALLTLRRKTTRVQRYRPGQEWTHPPVWWSA 51 >tr|C7MZX1|C7MZX1_SACVD Tax_Id=471857 SubName: Full=Putative uncharacterized protein;[Saccharomonospora viridis] Length = 81 Score = 34.7 bits (78), Expect = 3.5 Identities = 16/51 (31%), Positives = 24/51 (47%) Query: 1 VSVMEIHLFFVGIPLFLVVVLGAIFLTRKGPHPATYELSEKWTHPPILWAA 51 +S++E L FV IPL + + L K Y + W +PP+ W A Sbjct: 1 MSILETILVFVAIPLAVYGFFSLVTLRSKFASRPRYRPGQAWDYPPVWWTA 51 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.326 0.141 0.480 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 455,909,046 Number of extensions: 12746179 Number of successful extensions: 45772 Number of sequences better than 10.0: 20 Number of HSP's gapped: 45828 Number of HSP's successfully gapped: 20 Length of query: 80 Length of database: 3,846,993,858 Length adjustment: 51 Effective length of query: 29 Effective length of database: 3,271,958,505 Effective search space: 94886796645 Effective search space used: 94886796645 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 75 (33.5 bits)