BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4019 (267 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HQD4|B2HQD4_MYCMM Tax_Id=216594 SubName: Full=Transcription... 439 e-121 tr|A0PUE2|A0PUE2_MYCUA Tax_Id=362242 SubName: Full=Transcription... 432 e-119 tr|Q73XB5|Q73XB5_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 394 e-108 tr|A0QD32|A0QD32_MYCA1 Tax_Id=243243 SubName: Full=Transcription... 388 e-106 sp|P67435|Y1388_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ... 364 6e-99 sp|P67434|Y1353_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 364 6e-99 tr|C1AMZ8|C1AMZ8_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 364 6e-99 tr|A5U253|A5U253_MYCTA Tax_Id=419947 SubName: Full=TetR/AcrR fam... 364 6e-99 tr|A1KIE3|A1KIE3_MYCBP Tax_Id=410289 SubName: Full=Probable tran... 364 6e-99 tr|A5WM37|A5WM37_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 364 6e-99 tr|A2VHP1|A2VHP1_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 364 6e-99 tr|C6DTN2|C6DTN2_MYCTK Tax_Id=478434 SubName: Full=Transcription... 361 5e-98 tr|A0QUI9|A0QUI9_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 350 7e-95 tr|A1T6K8|A1T6K8_MYCVP Tax_Id=350058 SubName: Full=Transcription... 340 1e-91 tr|A4TDN9|A4TDN9_MYCGI Tax_Id=350054 SubName: Full=Transcription... 336 2e-90 tr|Q1BB55|Q1BB55_MYCSS Tax_Id=164756 SubName: Full=Transcription... 318 4e-85 tr|A3PXB4|A3PXB4_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 318 4e-85 tr|A1UDW0|A1UDW0_MYCSK Tax_Id=189918 SubName: Full=Transcription... 318 4e-85 tr|A4KGS2|A4KGS2_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 262 3e-68 tr|A0QUK3|A0QUK3_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 218 7e-55 tr|B1MMN2|B1MMN2_MYCA9 Tax_Id=561007 SubName: Full=Putative HTH-... 191 6e-47 tr|D0L3A8|D0L3A8_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr... 162 4e-38 tr|Q2J9T6|Q2J9T6_FRASC Tax_Id=106370 SubName: Full=Transcription... 93 4e-17 tr|B4EDH4|B4EDH4_BURCJ Tax_Id=216591 (tetR)SubName: Full=Tetracy... 77 2e-12 tr|Q0RTL8|Q0RTL8_FRAAA Tax_Id=326424 SubName: Full=Putative TetR... 77 3e-12 tr|D0ZHK2|D0ZHK2_EDWTA Tax_Id=498217 (tetR)SubName: Full=Tetracy... 77 3e-12 tr|Q39JB6|Q39JB6_BURS3 Tax_Id=269483 SubName: Full=Transcription... 76 4e-12 tr|C4EMN7|C4EMN7_STRRS Tax_Id=479432 SubName: Full=Transcription... 76 4e-12 sp|P03038|TETR1_ECOLX Tax_Id=562 (tetR)RecName: Full=Tetracyclin... 75 6e-12 tr|Q0VUT8|Q0VUT8_9ZZZZ Tax_Id=382639 (tetR)SubName: Full=Tetracy... 75 6e-12 tr|A6H933|A6H933_9ZZZZ Tax_Id=35419 (tetR)SubName: Full=Tetracyc... 75 6e-12 tr|Q5J476|Q5J476_SALCH Tax_Id=28901 (tetR)SubName: Full=RK2 tetr... 75 6e-12 tr|B7I2I3|B7I2I3_ACIB5 Tax_Id=480119 (tetR)SubName: Full=Tetracy... 75 6e-12 tr|B4TLZ3|B4TLZ3_SALSV Tax_Id=439843 (tetR)SubName: Full=Tetracy... 75 6e-12 tr|B1LRX5|B1LRX5_ECOSM Tax_Id=439855 (tetR)SubName: Full=Tetracy... 75 6e-12 tr|B0VCJ6|B0VCJ6_ACIBY Tax_Id=509173 (tetR)SubName: Full=Tetracy... 75 6e-12 tr|A4IVB8|A4IVB8_SALNS Tax_Id=423368 (tetR)SubName: Full=Tetracy... 75 6e-12 tr|Q8L2K1|Q8L2K1_SHISO Tax_Id=624 (tetR)SubName: Full=TetR class... 75 6e-12 tr|Q7DFW1|Q7DFW1_VIBCH Tax_Id=666 (tetR)SubName: Full=Tetracycli... 75 6e-12 tr|Q7B7D1|Q7B7D1_SHISO Tax_Id=624 (tetR)SubName: Full=Tetracycli... 75 6e-12 tr|Q7ATJ8|Q7ATJ8_AERSA Tax_Id=645 (tetR(A))SubName: Full=Tetracy... 75 6e-12 tr|Q7AS77|Q7AS77_9BACT Tax_Id=77133 (tetR)SubName: Full=Tetracyc... 75 6e-12 tr|Q79M22|Q79M22_ACIBA Tax_Id=470 (tetR)SubName: Full=TetR;[Acin... 75 6e-12 tr|Q701M0|Q701M0_SALCH Tax_Id=28901 (tnpR)SubName: Full=Tetracyc... 75 6e-12 tr|Q6ZYM7|Q6ZYM7_SALTY Tax_Id=90371 (tetR)SubName: Full=Tet repr... 75 6e-12 tr|Q6XQX5|Q6XQX5_ECOLX Tax_Id=562 (tetR)SubName: Full=TetR; SubN... 75 6e-12 tr|Q68E20|Q68E20_AERPU Tax_Id=648 (tetR)SubName: Full=TetRacycli... 75 6e-12 tr|Q5W3B9|Q5W3B9_9BACT Tax_Id=77133 (tetR)SubName: Full=Tetracyc... 75 6e-12 tr|Q5QJM1|Q5QJM1_SALTY Tax_Id=90371 (tetR)SubName: Full=Tetracyc... 75 6e-12 tr|A4SH32|A4SH32_SHISS Tax_Id=300269 (tetR)SubName: Full=TetR;[S... 75 6e-12 >tr|B2HQD4|B2HQD4_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein;[Mycobacterium marinum] Length = 267 Score = 439 bits (1128), Expect = e-121 Identities = 223/237 (94%), Positives = 223/237 (94%) Query: 1 MEVPVVXXXXXXXXXXXXXXGSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSI 60 MEVPVV GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSI Sbjct: 1 MEVPVVAKRAAADKRQRRERGSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSI 60 Query: 61 YWYFRKKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLIL 120 YWYFRKKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLIL Sbjct: 61 YWYFRKKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLIL 120 Query: 121 IRSALSPKAARLGAQEMERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQS 180 IRSALSPKAARLGAQEMERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQS Sbjct: 121 IRSALSPKAARLGAQEMERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQS 180 Query: 181 ADSGPRAIEDAMNIDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 ADSGPRAIEDAMNIDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE Sbjct: 181 ADSGPRAIEDAMNIDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 >tr|A0PUE2|A0PUE2_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein;[Mycobacterium ulcerans] Length = 267 Score = 432 bits (1110), Expect = e-119 Identities = 219/237 (92%), Positives = 220/237 (92%) Query: 1 MEVPVVXXXXXXXXXXXXXXGSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSI 60 MEVPVV GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSI Sbjct: 1 MEVPVVAKRAAADKRQRRERGSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSI 60 Query: 61 YWYFRKKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLIL 120 YWYFRKKDDLLNAMTDRALSKYVFATPYVE SDWRETLRNHARLMRKTFM NPILCDLIL Sbjct: 61 YWYFRKKDDLLNAMTDRALSKYVFATPYVEGSDWRETLRNHARLMRKTFMSNPILCDLIL 120 Query: 121 IRSALSPKAARLGAQEMERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQS 180 IRSALSPK ARLGAQ+MERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQS Sbjct: 121 IRSALSPKTARLGAQKMERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQS 180 Query: 181 ADSGPRAIEDAMNIDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 ADSGPRAIEDAMNIDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE Sbjct: 181 ADSGPRAIEDAMNIDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 >tr|Q73XB5|Q73XB5_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 268 Score = 394 bits (1011), Expect = e-108 Identities = 197/237 (83%), Positives = 210/237 (88%) Query: 1 MEVPVVXXXXXXXXXXXXXXGSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSI 60 MEVPVV GSINPDDII+GAFELAEQVSIDNLSMP+LGKHLGVGVTSI Sbjct: 2 MEVPVVAKQATADKRQRRERGSINPDDIITGAFELAEQVSIDNLSMPLLGKHLGVGVTSI 61 Query: 61 YWYFRKKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLIL 120 YWYFRKKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLIL Sbjct: 62 YWYFRKKDDLLNAMTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLIL 121 Query: 121 IRSALSPKAARLGAQEMERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQS 180 IR+ALSPKAARLGAQEME+A+ANLV+AGLSPEDAFDTY+A+S+HVRGSVVL RLYEK QS Sbjct: 122 IRAALSPKAARLGAQEMEKAVANLVQAGLSPEDAFDTYSAISVHVRGSVVLQRLYEKNQS 181 Query: 181 ADSGPRAIEDAMNIDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 +D GPRAIEDA+ IDP TPLLAQV+ GHRI PDE NFEYGL CILDHA RLI+E Sbjct: 182 SDVGPRAIEDAVAIDPEKTPLLAQVTRIGHRIGAPDETNFEYGLTCILDHASRLIEE 238 >tr|A0QD32|A0QD32_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium avium] Length = 262 Score = 388 bits (996), Expect = e-106 Identities = 191/217 (88%), Positives = 204/217 (94%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINPDDII+GAFELAEQVSIDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS Sbjct: 16 GSINPDDIITGAFELAEQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 75 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIR+ALSPKAARLGAQEME+A Sbjct: 76 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRAALSPKAARLGAQEMEKA 135 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 +ANLV+AGLSPEDAFDTY+A+S+HVRGSVVL RLYEK QS+D GPRAIEDA+ IDP TP Sbjct: 136 VANLVQAGLSPEDAFDTYSAISVHVRGSVVLQRLYEKNQSSDVGPRAIEDAVAIDPEKTP 195 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLAQV+ GHRI PDE NFEYGL CILDHA RLI+E Sbjct: 196 LLAQVTRIGHRIGAPDETNFEYGLTCILDHASRLIEE 232 >sp|P67435|Y1388_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized HTH-type transcriptional regulator Mb1388c;[Mycobacterium bovis] Length = 261 Score = 364 bits (934), Expect = 6e-99 Identities = 179/217 (82%), Positives = 195/217 (89%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DIISGAFELA+QVSIDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS Sbjct: 14 GSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 73 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 KYVFATPY+EA DWRETLRNHAR MRKTF NP+LCDLILIR+ALSPK ARLGAQEME+A Sbjct: 74 KYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLGAQEMEKA 133 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 IANLV AGLS EDAFD Y+AVS+HVRGSVVL RL K+QSA SGP AIE + IDP TTP Sbjct: 134 IANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVAIDPATTP 193 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLA +G+GHRI PDE NFEYGL+CILDHAGRLI++ Sbjct: 194 LLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >sp|P67434|Y1353_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized HTH-type transcriptional regulator Rv1353c/MT1396;[Mycobacterium tuberculosis] Length = 261 Score = 364 bits (934), Expect = 6e-99 Identities = 179/217 (82%), Positives = 195/217 (89%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DIISGAFELA+QVSIDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS Sbjct: 14 GSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 73 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 KYVFATPY+EA DWRETLRNHAR MRKTF NP+LCDLILIR+ALSPK ARLGAQEME+A Sbjct: 74 KYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLGAQEMEKA 133 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 IANLV AGLS EDAFD Y+AVS+HVRGSVVL RL K+QSA SGP AIE + IDP TTP Sbjct: 134 IANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVAIDPATTP 193 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLA +G+GHRI PDE NFEYGL+CILDHAGRLI++ Sbjct: 194 LLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|C1AMZ8|C1AMZ8_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 261 Score = 364 bits (934), Expect = 6e-99 Identities = 179/217 (82%), Positives = 195/217 (89%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DIISGAFELA+QVSIDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS Sbjct: 14 GSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 73 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 KYVFATPY+EA DWRETLRNHAR MRKTF NP+LCDLILIR+ALSPK ARLGAQEME+A Sbjct: 74 KYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLGAQEMEKA 133 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 IANLV AGLS EDAFD Y+AVS+HVRGSVVL RL K+QSA SGP AIE + IDP TTP Sbjct: 134 IANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVAIDPATTP 193 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLA +G+GHRI PDE NFEYGL+CILDHAGRLI++ Sbjct: 194 LLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|A5U253|A5U253_MYCTA Tax_Id=419947 SubName: Full=TetR/AcrR family transcriptional regulator;[Mycobacterium tuberculosis] Length = 261 Score = 364 bits (934), Expect = 6e-99 Identities = 179/217 (82%), Positives = 195/217 (89%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DIISGAFELA+QVSIDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS Sbjct: 14 GSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 73 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 KYVFATPY+EA DWRETLRNHAR MRKTF NP+LCDLILIR+ALSPK ARLGAQEME+A Sbjct: 74 KYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLGAQEMEKA 133 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 IANLV AGLS EDAFD Y+AVS+HVRGSVVL RL K+QSA SGP AIE + IDP TTP Sbjct: 134 IANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVAIDPATTP 193 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLA +G+GHRI PDE NFEYGL+CILDHAGRLI++ Sbjct: 194 LLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|A1KIE3|A1KIE3_MYCBP Tax_Id=410289 SubName: Full=Probable transcriptional regulatory protein;[Mycobacterium bovis] Length = 261 Score = 364 bits (934), Expect = 6e-99 Identities = 179/217 (82%), Positives = 195/217 (89%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DIISGAFELA+QVSIDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS Sbjct: 14 GSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 73 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 KYVFATPY+EA DWRETLRNHAR MRKTF NP+LCDLILIR+ALSPK ARLGAQEME+A Sbjct: 74 KYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLGAQEMEKA 133 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 IANLV AGLS EDAFD Y+AVS+HVRGSVVL RL K+QSA SGP AIE + IDP TTP Sbjct: 134 IANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVAIDPATTP 193 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLA +G+GHRI PDE NFEYGL+CILDHAGRLI++ Sbjct: 194 LLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|A5WM37|A5WM37_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 261 Score = 364 bits (934), Expect = 6e-99 Identities = 179/217 (82%), Positives = 195/217 (89%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DIISGAFELA+QVSIDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS Sbjct: 14 GSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 73 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 KYVFATPY+EA DWRETLRNHAR MRKTF NP+LCDLILIR+ALSPK ARLGAQEME+A Sbjct: 74 KYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLGAQEMEKA 133 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 IANLV AGLS EDAFD Y+AVS+HVRGSVVL RL K+QSA SGP AIE + IDP TTP Sbjct: 134 IANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVAIDPATTP 193 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLA +G+GHRI PDE NFEYGL+CILDHAGRLI++ Sbjct: 194 LLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|A2VHP1|A2VHP1_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 261 Score = 364 bits (934), Expect = 6e-99 Identities = 179/217 (82%), Positives = 195/217 (89%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DIISGAFELA+QVSIDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS Sbjct: 14 GSINPEDIISGAFELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 73 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 KYVFATPY+EA DWRETLRNHAR MRKTF NP+LCDLILIR+ALSPK ARLGAQEME+A Sbjct: 74 KYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLGAQEMEKA 133 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 IANLV AGLS EDAFD Y+AVS+HVRGSVVL RL K+QSA SGP AIE + IDP TTP Sbjct: 134 IANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVAIDPATTP 193 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLA +G+GHRI PDE NFEYGL+CILDHAGRLI++ Sbjct: 194 LLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|C6DTN2|C6DTN2_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 261 Score = 361 bits (926), Expect = 5e-98 Identities = 178/217 (82%), Positives = 194/217 (89%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DIISGAFELA+QVSIDNLSMP+LGKHL VGVTSIYWYFRKKDDLLNAMTDRALS Sbjct: 14 GSINPEDIISGAFELAQQVSIDNLSMPLLGKHLRVGVTSIYWYFRKKDDLLNAMTDRALS 73 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 KYVFATPY+EA DWRETLRNHAR MRKTF NP+LCDLILIR+ALSPK ARLGAQEME+A Sbjct: 74 KYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLGAQEMEKA 133 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 IANLV AGLS EDAFD Y+AVS+HVRGSVVL RL K+QSA SGP AIE + IDP TTP Sbjct: 134 IANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVAIDPATTP 193 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLA +G+GHRI PDE NFEYGL+CILDHAGRLI++ Sbjct: 194 LLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 230 >tr|A0QUI9|A0QUI9_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium smegmatis] Length = 245 Score = 350 bits (899), Expect = 7e-95 Identities = 173/217 (79%), Positives = 191/217 (88%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DII GAFELAE+VSIDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRAL Sbjct: 16 GSINPEDIIKGAFELAEKVSIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALR 75 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 ++V ATPYVEA DWRE+L NHAR MRK FMGNPILCDLILIRSALSP+AAR+G QE+E A Sbjct: 76 EFVVATPYVEAKDWRESLANHARTMRKAFMGNPILCDLILIRSALSPRAARVGVQEVESA 135 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 IA LVEAGLS EDAFDTY+AVS+HVRGSVVLHRLYEK ++ D+ P E+AM IDP TTP Sbjct: 136 IAGLVEAGLSVEDAFDTYSAVSVHVRGSVVLHRLYEKNRANDNAPGDFEEAMVIDPETTP 195 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLAQV+ +GHRI DE NFEYGL CILDHA RLI+E Sbjct: 196 LLAQVTSEGHRIGAADEQNFEYGLKCILDHAARLIEE 232 >tr|A1T6K8|A1T6K8_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium vanbaalenii] Length = 250 Score = 340 bits (872), Expect = 1e-91 Identities = 166/217 (76%), Positives = 187/217 (86%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINPDDII GAFELAEQV IDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRAL Sbjct: 16 GSINPDDIIKGAFELAEQVGIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALR 75 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 +Y FATPYVEA DWRETL NHAR MR+TF GNPILCDLILIRSALSP+AA+LG QE+ERA Sbjct: 76 QYAFATPYVEAKDWRETLANHARSMRQTFNGNPILCDLILIRSALSPRAAKLGVQEVERA 135 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 I +LVEAGLSPEDAFDTY+A+S+HVRGSVVL RL EK + + G I+D M IDP + P Sbjct: 136 IGSLVEAGLSPEDAFDTYSAMSVHVRGSVVLQRLREKNLAGEDGHGDIDDTMTIDPESAP 195 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLA V+ KGH ++ D+ NFEYGL+CILDHA RLI++ Sbjct: 196 LLAAVTQKGHHLSASDDRNFEYGLECILDHAARLIEQ 232 >tr|A4TDN9|A4TDN9_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium gilvum] Length = 244 Score = 336 bits (861), Expect = 2e-90 Identities = 164/217 (75%), Positives = 187/217 (86%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINPDDII GAFELAEQV IDNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAMTDRAL Sbjct: 16 GSINPDDIIKGAFELAEQVGIDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALR 75 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 +Y FATPYVEA DWRETL NHAR MRKTF GNPILCDLILIRSALSP+AA++G Q++E+A Sbjct: 76 QYAFATPYVEARDWRETLANHARTMRKTFNGNPILCDLILIRSALSPRAAKVGVQQVEKA 135 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 I +LVEAGLSPEDAFDTY+A+S+HVRGSVVL RL EK + D G I+D M IDP T P Sbjct: 136 IGSLVEAGLSPEDAFDTYSAMSVHVRGSVVLQRLREKNLAGDDGHGDIDDTMAIDPETAP 195 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 LLA V+ KGH ++ D+ NFE+GLDCIL++A RLI++ Sbjct: 196 LLAAVTQKGHHLSASDDRNFEFGLDCILENAARLIEK 232 >tr|Q1BB55|Q1BB55_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 250 Score = 318 bits (815), Expect = 4e-85 Identities = 150/217 (69%), Positives = 184/217 (84%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DII GAFELAE+VS+DNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAM DRAL Sbjct: 16 GSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMADRALR 75 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 + F PYV+A++WRE+L NHA MRKTF+ +PILCDL+LIR ALS KA RLG +++E A Sbjct: 76 QIAFEAPYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGALSTKALRLGLEQIEAA 135 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 ++ LV AGLSPEDAFDTY+AVS+HVRGSVVL RLYEKT+S +S ++D+ IDP +TP Sbjct: 136 VSGLVGAGLSPEDAFDTYSAVSVHVRGSVVLARLYEKTRSLESSEFRLDDSATIDPESTP 195 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 L+A++S KGH + P++ NFEYGL+CILDHA RLI++ Sbjct: 196 LMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQ 232 >tr|A3PXB4|A3PXB4_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 250 Score = 318 bits (815), Expect = 4e-85 Identities = 150/217 (69%), Positives = 184/217 (84%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DII GAFELAE+VS+DNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAM DRAL Sbjct: 16 GSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMADRALR 75 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 + F PYV+A++WRE+L NHA MRKTF+ +PILCDL+LIR ALS KA RLG +++E A Sbjct: 76 QIAFEAPYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGALSTKALRLGLEQIEAA 135 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 ++ LV AGLSPEDAFDTY+AVS+HVRGSVVL RLYEKT+S +S ++D+ IDP +TP Sbjct: 136 VSGLVGAGLSPEDAFDTYSAVSVHVRGSVVLARLYEKTRSLESSEFRLDDSATIDPESTP 195 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 L+A++S KGH + P++ NFEYGL+CILDHA RLI++ Sbjct: 196 LMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQ 232 >tr|A1UDW0|A1UDW0_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 250 Score = 318 bits (815), Expect = 4e-85 Identities = 150/217 (69%), Positives = 184/217 (84%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSINP+DII GAFELAE+VS+DNLSMP+LGKHLGVGVTSIYWYFRKKDDLLNAM DRAL Sbjct: 16 GSINPEDIIKGAFELAEEVSVDNLSMPLLGKHLGVGVTSIYWYFRKKDDLLNAMADRALR 75 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 + F PYV+A++WRE+L NHA MRKTF+ +PILCDL+LIR ALS KA RLG +++E A Sbjct: 76 QIAFEAPYVDAANWRESLHNHAHNMRKTFLASPILCDLVLIRGALSTKALRLGLEQIEAA 135 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 ++ LV AGLSPEDAFDTY+AVS+HVRGSVVL RLYEKT+S +S ++D+ IDP +TP Sbjct: 136 VSGLVGAGLSPEDAFDTYSAVSVHVRGSVVLARLYEKTRSLESSEFRLDDSATIDPESTP 195 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 L+A++S KGH + P++ NFEYGL+CILDHA RLI++ Sbjct: 196 LMAELSAKGHHVGVPNDMNFEYGLNCILDHAARLIEQ 232 >tr|A4KGS2|A4KGS2_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 195 Score = 262 bits (669), Expect = 3e-68 Identities = 129/164 (78%), Positives = 142/164 (86%) Query: 74 MTDRALSKYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLG 133 MTDRALSKYVFATPY+EA DWRETLRNHAR MRKTF NP+LCDLILIR+ALSPK ARLG Sbjct: 1 MTDRALSKYVFATPYIEAGDWRETLRNHARSMRKTFADNPVLCDLILIRAALSPKTARLG 60 Query: 134 AQEMERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMN 193 AQEME+AIANLV AGLS EDAFD Y+AVS+HVRGSVVL RL K+QSA SGP AIE + Sbjct: 61 AQEMEKAIANLVTAGLSLEDAFDIYSAVSVHVRGSVVLDRLSRKSQSAGSGPSAIEHPVA 120 Query: 194 IDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLIDE 237 IDP TTPLLA +G+GHRI PDE NFEYGL+CILDHAGRLI++ Sbjct: 121 IDPATTPLLAHATGRGHRIGAPDETNFEYGLECILDHAGRLIEQ 164 >tr|A0QUK3|A0QUK3_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium smegmatis] Length = 246 Score = 218 bits (554), Expect = 7e-55 Identities = 114/214 (53%), Positives = 147/214 (68%), Gaps = 2/214 (0%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSI D+I+SGAFE+A +VS+DNLSMP L KHL VGVTSIYWYFR+KDDLL+AMT+ AL Sbjct: 16 GSITVDEILSGAFEVAREVSVDNLSMPQLAKHLDVGVTSIYWYFRRKDDLLDAMTELALR 75 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERA 140 +Y F ++A WRE+LR HA MR T NPILCDLILIR AAR +++E+ Sbjct: 76 EYDFGVSSIDAGSWRESLRAHAHRMRDTIQQNPILCDLILIRGTGGTPAARHALEKIEQP 135 Query: 141 IANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTP 200 +A LV+AGLSP+ A TY+A+ + VR S VLHRL + + PR + IDP T P Sbjct: 136 VAALVQAGLSPQQAVQTYSAIQVLVRSSAVLHRLQNRASTVPL-PRDHWQQV-IDPQTMP 193 Query: 201 LLAQVSGKGHRIATPDEANFEYGLDCILDHAGRL 234 L++ ++G G+RI D ANF++ LD IL+ A L Sbjct: 194 LISSLTGDGYRIGAADTANFDHILDSILERAEHL 227 >tr|B1MMN2|B1MMN2_MYCA9 Tax_Id=561007 SubName: Full=Putative HTH-type transcriptional regulator;[Mycobacterium abscessus] Length = 250 Score = 191 bits (486), Expect = 6e-47 Identities = 100/218 (45%), Positives = 143/218 (65%), Gaps = 10/218 (4%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSI +DII+GAFELAE++ I LSMP+L KHL VGVTSIYWYFRKK +LL+AMTDRA Sbjct: 30 GSITAEDIIAGAFELAEEIGISGLSMPLLAKHLDVGVTSIYWYFRKKGELLDAMTDRATK 89 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIR-SALSPKAARLGAQEMER 139 +Y FA P+V W++ LR+H MR+ F P+L +LIL+R S LS +A + Q +E Sbjct: 90 QYHFAAPFVGDETWQDALRSHTHRMREAFRERPVLVELILMRTSELSSEALQASIQNLES 149 Query: 140 AIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTT 199 + L+ G SP++A D Y A+S+H+RG VVL + D+ A +A ++ P T Sbjct: 150 LVRTLIGVGFSPDNALDVYFALSLHIRGVVVLEHM-------DTVMPASGEARSLVPSAT 202 Query: 200 --PLLAQVSGKGHRIATPDEANFEYGLDCILDHAGRLI 235 P L +++ +GH IAT +ANF++ ++ I++ A L+ Sbjct: 203 LAPTLHELASRGHSIATISDANFDFTVEAIIERAENLL 240 >tr|D0L3A8|D0L3A8_GORB4 Tax_Id=526226 SubName: Full=Regulatory protein TetR;[Gordonia bronchialis] Length = 231 Score = 162 bits (410), Expect = 4e-38 Identities = 86/216 (39%), Positives = 132/216 (61%), Gaps = 7/216 (3%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSI+ ++II+GAF++A +VS+ SMPML KHLGVGVTSIYWYFRKK+DLL+AM D+A Sbjct: 15 GSISAEEIIAGAFDVAGRVSLSEFSMPMLAKHLGVGVTSIYWYFRKKEDLLDAMADKANE 74 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIR---SALSPKAARLGAQEM 137 +Y ATP++ A +W++ LR H R M + F P+L +L L+R + + + A ++ Sbjct: 75 EYHAATPFIGADNWQDGLRRHFRRMHQAFRTQPVLVELTLLRPYPHSADRTSMQATAAKL 134 Query: 138 ERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPL 197 + +A +V AG + E A + Y ++ HV G+ ++ PR ++ + Sbjct: 135 DSMVAAMVGAGFTAEQALEIYLSLLAHVCGAAMVEHQGIFATYDGGLPRGADETAS---- 190 Query: 198 TTPLLAQVSGKGHRIATPDEANFEYGLDCILDHAGR 233 PLLA+++ KGHRI ++A FE+ + IL A R Sbjct: 191 AVPLLAELAAKGHRIDNVEDATFEFTFEAILAQAER 226 >tr|Q2J9T6|Q2J9T6_FRASC Tax_Id=106370 SubName: Full=Transcriptional regulator, TetR family;[Frankia sp.] Length = 221 Score = 92.8 bits (229), Expect = 4e-17 Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 24/209 (11%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GSIN I++G FE +D LSMP L +L VGVTSIYWYF+ K +LL+AM + AL Sbjct: 19 GSINAPGILAGVFEFCRDTPVDQLSMPRLAAYLDVGVTSIYWYFKSKRELLDAMAEEALV 78 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIR-SALSPKAARLGAQEMER 139 + + P + W + LR + + + CDLI R +L+ + Sbjct: 79 SFYESMPALRGDAWEDVLREFFKNFYALLAVDDLKCDLIARRIGSLTYQETITSWPRAAE 138 Query: 140 AIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTT 199 +A L +AG A+ + +S + RG ++ R E +A Sbjct: 139 LLAGLRDAGFPSSLAWHAFFTLSTYTRGFLLTERPAEDPAAA-----------------V 181 Query: 200 PLLAQVSGKGHRIATPDEANFEYGLDCIL 228 P AQ SG + P++ FE+G+ I+ Sbjct: 182 PAAAQPSG----VTVPED--FEFGITNII 204 >tr|B4EDH4|B4EDH4_BURCJ Tax_Id=216591 (tetR)SubName: Full=Tetracycline repressor protein;[Burkholderia cepacia] Length = 210 Score = 77.0 bits (188), Expect = 2e-12 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 16/206 (7%) Query: 26 DDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSKYVFA 85 D ++ A EL ++V ID LS L + LGV ++YW+FR K +LL+AM + + + A Sbjct: 11 DMVLRAALELLDEVGIDGLSTRKLAERLGVQSPTLYWHFRNKGELLDAMAEAIMLERHDA 70 Query: 86 TPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAIANLV 145 + W L ++AR R+ + D + + P+A G+ +ER +A L Sbjct: 71 SLPRPGEAWDAWLLDNARSFRRALLA---YRDDARLHAGTRPRALHFGS--IERKVALLC 125 Query: 146 EAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTPLLAQV 205 +AG +P+DA D A+ V G V+ E+ AD DA D PLLA+ Sbjct: 126 DAGFAPDDAVDVMYALGRFVVGWVL-----EEQAEADGD----ADAPLPDAAEYPLLAK- 175 Query: 206 SGKGHRIATPDEANFEYGLDCILDHA 231 R DEA FE G+ I+D A Sbjct: 176 GWAALRARGGDEA-FERGVALIVDGA 200 >tr|Q0RTL8|Q0RTL8_FRAAA Tax_Id=326424 SubName: Full=Putative TetR-family transcriptional regulator;[Frankia alni] Length = 283 Score = 76.6 bits (187), Expect = 3e-12 Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 10/193 (5%) Query: 21 GSINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALS 80 GS++ +I++ A +LA Q + LSMP L + LG GV S+Y YF KDDLL A+ D+ +S Sbjct: 29 GSLSSGEIVAAARDLAAQDGLARLSMPALARRLGCGVMSVYRYFDTKDDLLAALADQVMS 88 Query: 81 KYVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLIL------IRSALSPKAARLGA 134 P WR+ L + R P +++L IR+AL+P R Sbjct: 89 DLHRQLPPAGDGPWRDELITYFTAYRDLMESFPAYREVVLYAPTFVIRAALTPAQLR--- 145 Query: 135 QEMERAIANLVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNI 194 ++ I L+ AGL DA Y + R V + + A Sbjct: 146 -RLDTGIGLLLRAGLPLADAAAVYNVCFNYTRSFVAFEHAARAAATTATAATATTTTATT 204 Query: 195 DPLTTPLLAQVSG 207 TT V+G Sbjct: 205 TTATTTTATTVAG 217 >tr|D0ZHK2|D0ZHK2_EDWTA Tax_Id=498217 (tetR)SubName: Full=Tetracycline repressor protein R class A variant;[Edwardsiella tarda EIB202] Length = 216 Score = 76.6 bits (187), Expect = 3e-12 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ + D I S P GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQALLA---YRDGARIHSGTRP-----GAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|Q39JB6|Q39JB6_BURS3 Tax_Id=269483 SubName: Full=Transcriptional regulator, TetR family;[Burkholderia sp.] Length = 210 Score = 75.9 bits (185), Expect = 4e-12 Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 16/206 (7%) Query: 26 DDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSKYVFA 85 D ++ A EL ++V ID LS L + LGV ++YW+FR K +LL+AM + + + A Sbjct: 11 DTVLRAALELLDEVGIDGLSTRKLAERLGVQSPTLYWHFRNKGELLDAMAEAIMLERHDA 70 Query: 86 TPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAIANLV 145 + W L ++AR R+ + D + + P+A L +ER +A L Sbjct: 71 SLPRPGEAWDAWLLDNARSFRRALLA---YRDGARLHAGTRPRA--LHFSSIERKVALLG 125 Query: 146 EAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPRAIEDAMNIDPLTTPLLAQV 205 +AG +P++A D A+ V G V L E+ +S+D + DA PLLA+ Sbjct: 126 DAGFAPDEAVDVMYALGRFVVGWV----LEEQAESSDEAAAPLPDAAEY-----PLLAK- 175 Query: 206 SGKGHRIATPDEANFEYGLDCILDHA 231 R + D+A FE G+ I+D A Sbjct: 176 GWAALRGRSGDDA-FERGVAWIVDGA 200 >tr|C4EMN7|C4EMN7_STRRS Tax_Id=479432 SubName: Full=Transcriptional regulator, tetR family;[Streptosporangium roseum DSM 43021] Length = 259 Score = 75.9 bits (185), Expect = 4e-12 Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 17/217 (7%) Query: 22 SINPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK 81 +++ D I+ A EL + +D LSM LG LG G TSIYW+ KD+LL + D K Sbjct: 20 ALSRDQIVRAAMELLDTEGLDALSMRRLGARLGSGATSIYWHVANKDELLELVMDEVFGK 79 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 P V WR+ + A +R +P LI R +L P A + + R + Sbjct: 80 VALPDPSVVG--WRDAVSMFAHGLRAALFEHPWSVALIGTRPSLGPNAMEISS----RLL 133 Query: 142 ANLVEAGLSPEDAFDTYAAVSIHVRG----SVVLHRLYEKTQSADSG-----PRAIEDAM 192 AG +A+ +V G + + +D G A++ A Sbjct: 134 RTFSLAGFEGMALDYASSALMSYVLGVTTPEIAWRAAMAGAELSDEGLMAGMKSAVDKAA 193 Query: 193 NIDPLTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 P A+ +G+ T E NF++GL CILD Sbjct: 194 ADHPELAARYAEYAGEDP--GTSRELNFDFGLTCILD 228 >sp|P03038|TETR1_ECOLX Tax_Id=562 (tetR)RecName: Full=Tetracycline repressor protein class A from transposon 1721;[Escherichia coli] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|Q0VUT8|Q0VUT8_9ZZZZ Tax_Id=382639 (tetR)SubName: Full=Tetracycline resistance repressor protein;[IncP-1 plasmid pKJK5] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|A6H933|A6H933_9ZZZZ Tax_Id=35419 (tetR)SubName: Full=Tetracycline resistance repressor protein;[Birmingham IncP-alpha plasmid] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|Q5J476|Q5J476_SALCH Tax_Id=28901 (tetR)SubName: Full=RK2 tetracycline repressor protein; SubName: Full=TetR;[Salmonella choleraesuis] Length = 225 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 13 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 72 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 73 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 123 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 124 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 175 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 176 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 205 >tr|B7I2I3|B7I2I3_ACIB5 Tax_Id=480119 (tetR)SubName: Full=Tetracycline repressor protein, class A;[Acinetobacter baumannii] Length = 225 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 13 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 72 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 73 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 123 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 124 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 175 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 176 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 205 >tr|B4TLZ3|B4TLZ3_SALSV Tax_Id=439843 (tetR)SubName: Full=Tetracycline repressor protein, class A;[Salmonella schwarzengrund] Length = 225 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 13 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 72 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 73 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 123 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 124 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 175 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 176 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 205 >tr|B1LRX5|B1LRX5_ECOSM Tax_Id=439855 (tetR)SubName: Full=Tetracycline repressor protein, class A;[Escherichia coli] Length = 225 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 13 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 72 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 73 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 123 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 124 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 175 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 176 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 205 >tr|B0VCJ6|B0VCJ6_ACIBY Tax_Id=509173 (tetR)SubName: Full=Tetracycline repressor protein;[Acinetobacter baumannii] Length = 225 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 13 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 72 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 73 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 123 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 124 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 175 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 176 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 205 >tr|A4IVB8|A4IVB8_SALNS Tax_Id=423368 (tetR)SubName: Full=Tetracycline repressor protein R, class A;[Salmonella newport] Length = 225 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 13 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 72 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 73 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 123 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 124 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 175 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 176 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 205 >tr|Q8L2K1|Q8L2K1_SHISO Tax_Id=624 (tetR)SubName: Full=TetR class A variant;[Shigella sonnei] Length = 225 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 13 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 72 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 73 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 123 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 124 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 175 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 176 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 205 >tr|Q7DFW1|Q7DFW1_VIBCH Tax_Id=666 (tetR)SubName: Full=Tetracycline resistance repressor protein;[Vibrio cholerae] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|Q7B7D1|Q7B7D1_SHISO Tax_Id=624 (tetR)SubName: Full=Tetracycline resistance repressor protein;[Shigella sonnei] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|Q7ATJ8|Q7ATJ8_AERSA Tax_Id=645 (tetR(A))SubName: Full=Tetracycline resistance repressor;[Aeromonas salmonicida] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|Q7AS77|Q7AS77_9BACT Tax_Id=77133 (tetR)SubName: Full=Tetracycline repressor protein; SubName: Full=Tetracycline resistance repressor protein;[uncultured bacterium] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|Q79M22|Q79M22_ACIBA Tax_Id=470 (tetR)SubName: Full=TetR;[Acinetobacter baumannii] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|Q701M0|Q701M0_SALCH Tax_Id=28901 (tnpR)SubName: Full=Tetracycline repressor protein class A;[Salmonella choleraesuis] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|Q6ZYM7|Q6ZYM7_SALTY Tax_Id=90371 (tetR)SubName: Full=Tet repressor protein class A;[Salmonella typhimurium] Length = 225 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 13 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 72 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 73 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 123 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 124 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 175 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 176 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 205 >tr|Q6XQX5|Q6XQX5_ECOLX Tax_Id=562 (tetR)SubName: Full=TetR; SubName: Full=Tetracycline repressor protein class A from transposon 1721; SubName: Full=Tetracycline resistance repressor protein TetR; SubName: Full=Tetracycline repressor protein;[Escherichia coli] Length = 225 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 13 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 72 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 73 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 123 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 124 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 175 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 176 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 205 >tr|Q68E20|Q68E20_AERPU Tax_Id=648 (tetR)SubName: Full=TetRacycline repressor protein class a from transposon 1721;[Aeromonas punctata] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|Q5W3B9|Q5W3B9_9BACT Tax_Id=77133 (tetR)SubName: Full=Tetracycline resistance repressor protein;[uncultured bacterium] Length = 225 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 13 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 72 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 73 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 123 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 124 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 175 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 176 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 205 >tr|Q5QJM1|Q5QJM1_SALTY Tax_Id=90371 (tetR)SubName: Full=Tetracycline resistance repressor protein;[Salmonella typhimurium] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 >tr|A4SH32|A4SH32_SHISS Tax_Id=300269 (tetR)SubName: Full=TetR;[Shigella sonnei] Length = 216 Score = 75.5 bits (184), Expect = 6e-12 Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 26/213 (12%) Query: 23 INPDDIISGAFELAEQVSIDNLSMPMLGKHLGVGVTSIYWYFRKKDDLLNAMTDRALSK- 81 + P+ +I A +L +V +D L+ L + LGV ++YW+FR K LL+A+ + L++ Sbjct: 4 LQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAEN 63 Query: 82 YVFATPYVEASDWRETLRNHARLMRKTFMGNPILCDLILIRSALSPKAARLGAQEMERAI 141 + + P + DWR L +AR R+ L A R GA +ME A Sbjct: 64 HTHSVPRAD-DDWRSFLIGNARSFRQAL--------LAYRDGARIHAGTRPGAPQMETAD 114 Query: 142 AN---LVEAGLSPEDAFDTYAAVSIHVRGSVVLHRLYEKTQSADSGPR--AIEDAMNIDP 196 A L EAG S DA + +S G+V L E+ +D+G R +E A P Sbjct: 115 AQLRFLCEAGFSAGDAVNALMTISYFTVGAV----LEEQAGDSDAGERGGTVEQA----P 166 Query: 197 LTTPLLAQVSGKGHRIATPDEANFEYGLDCILD 229 L+ L A + A PD A FE GL I+D Sbjct: 167 LSPLLRAAIDAFDE--AGPDAA-FEQGLAVIVD 196 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.319 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,614,031,628 Number of extensions: 62046511 Number of successful extensions: 159519 Number of sequences better than 10.0: 1349 Number of HSP's gapped: 160416 Number of HSP's successfully gapped: 1350 Length of query: 267 Length of database: 3,846,993,858 Length adjustment: 135 Effective length of query: 132 Effective length of database: 2,324,841,453 Effective search space: 306879071796 Effective search space used: 306879071796 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 79 (35.0 bits)