BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_4067
         (101 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

sp|B2HQI2|CLPS_MYCMM Tax_Id=216594 (clpS)RecName: Full=ATP-depen...   205   2e-51
sp|Q73X80|CLPS_MYCPA Tax_Id=1770 (clpS)RecName: Full=ATP-depende...   184   3e-45
sp|A0QCZ8|CLPS_MYCA1 Tax_Id=243243 (clpS)RecName: Full=ATP-depen...   184   3e-45
sp|P67647|CLPS_MYCTU Tax_Id=1773 (clpS)RecName: Full=ATP-depende...   177   4e-43
sp|A5U231|CLPS_MYCTA Tax_Id=419947 (clpS)RecName: Full=ATP-depen...   177   4e-43
sp|C1AMX6|CLPS_MYCBT Tax_Id=561275 (clpS)RecName: Full=ATP-depen...   177   4e-43
sp|A1KIC1|CLPS_MYCBP Tax_Id=410289 (clpS)RecName: Full=ATP-depen...   177   4e-43
sp|P67648|CLPS_MYCBO Tax_Id=1765 (clpS)RecName: Full=ATP-depende...   177   4e-43
tr|C6DTQ4|C6DTQ4_MYCTK Tax_Id=478434 SubName: Full=Putative unch...   177   4e-43
tr|A5WM17|A5WM17_MYCTF Tax_Id=336982 SubName: Full=Putative unch...   177   4e-43
tr|A4KGQ2|A4KGQ2_MYCTU Tax_Id=395095 SubName: Full=Putative unch...   177   4e-43
tr|A2VHM2|A2VHM2_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   177   4e-43
tr|A0R1X7|A0R1X7_MYCS2 Tax_Id=246196 SubName: Full=ATP-dependent...   167   3e-40
sp|P53423|CLPS_MYCLE Tax_Id=1769 (clpS)RecName: Full=ATP-depende...   165   2e-39
tr|B8ZR53|B8ZR53_MYCLB Tax_Id=561304 SubName: Full=Putative unch...   165   2e-39
tr|A1TD23|A1TD23_MYCVP Tax_Id=350058 SubName: Full=ATP-dependent...   159   7e-38
tr|Q1B576|Q1B576_MYCSS Tax_Id=164756 SubName: Full=ATP-dependent...   157   5e-37
tr|A3Q388|A3Q388_MYCSJ Tax_Id=164757 SubName: Full=ATP-dependent...   157   5e-37
tr|A1UJW1|A1UJW1_MYCSK Tax_Id=189918 SubName: Full=ATP-dependent...   157   5e-37
tr|A4T8H0|A4T8H0_MYCGI Tax_Id=350054 SubName: Full=ATP-dependent...   156   6e-37
tr|B1MLY4|B1MLY4_MYCA9 Tax_Id=561007 SubName: Full=Probable ATP-...   147   4e-34
tr|A0PUI1|A0PUI1_MYCUA Tax_Id=362242 SubName: Full=Putative unch...   144   2e-33
sp|Q5Z0W0|CLPS_NOCFA Tax_Id=37329 (clpS)RecName: Full=ATP-depend...   133   7e-30
tr|C3JU49|C3JU49_RHOER Tax_Id=596309 (clpS)SubName: Full=ATP-dep...   132   2e-29
tr|C1A1V7|C1A1V7_RHOE4 Tax_Id=234621 (clpS)SubName: Full=Putativ...   130   5e-29
tr|C6WNP2|C6WNP2_ACTMD Tax_Id=446462 SubName: Full=ATP-dependent...   129   1e-28
sp|C1AVW7|CLPS_RHOOB Tax_Id=632772 (clpS)RecName: Full=ATP-depen...   128   2e-28
tr|A4F902|A4F902_SACEN Tax_Id=405948 SubName: Full=ATP-dependent...   128   2e-28
sp|Q0SGS7|CLPS_RHOSR Tax_Id=101510 (clpS)RecName: Full=ATP-depen...   127   3e-28
tr|C2AS57|C2AS57_TSUPA Tax_Id=521096 SubName: Full=Uncharacteriz...   127   3e-28
tr|D0L9M6|D0L9M6_GORB4 Tax_Id=526226 SubName: Full=ATP-dependent...   125   2e-27
tr|C7MWD2|C7MWD2_SACVD Tax_Id=471857 SubName: Full=Uncharacteriz...   125   2e-27
tr|Q2JEP4|Q2JEP4_FRASC Tax_Id=106370 SubName: Full=ATP-dependent...   121   2e-26
tr|C0U6K4|C0U6K4_9ACTO Tax_Id=526225 SubName: Full=Uncharacteriz...   120   4e-26
tr|C1RJ77|C1RJ77_9CELL Tax_Id=446466 SubName: Full=Uncharacteriz...   120   5e-26
sp|Q6NFN0|CLPS_CORDI Tax_Id=1717 (clpS)RecName: Full=ATP-depende...   119   1e-25
tr|D1BZD3|D1BZD3_9MICO Tax_Id=446471 SubName: Full=ATP-dependent...   118   2e-25
tr|A0LVK3|A0LVK3_ACIC1 Tax_Id=351607 SubName: Full=ATP-dependent...   117   4e-25
tr|A8M4H4|A8M4H4_SALAI Tax_Id=391037 SubName: Full=ATP-dependent...   117   5e-25
tr|C4RAZ2|C4RAZ2_9ACTO Tax_Id=219305 SubName: Full=ATP-dependent...   116   9e-25
tr|B5HNV9|B5HNV9_9ACTO Tax_Id=463191 SubName: Full=ATP-dependent...   116   9e-25
sp|Q9S2G5|CLPS_STRCO Tax_Id=1902 (clpS)RecName: Full=ATP-depende...   115   1e-24
tr|Q0RQM3|Q0RQM3_FRAAA Tax_Id=326424 (clpS)SubName: Full=ATP-dep...   115   1e-24
tr|C8XFX3|C8XFX3_NAKMY Tax_Id=479431 SubName: Full=ATP-dependent...   115   1e-24
sp|Q82D28|CLPS_STRAW Tax_Id=33903 (clpS)RecName: Full=ATP-depend...   115   2e-24
tr|C5BY86|C5BY86_BEUC1 Tax_Id=471853 SubName: Full=ATP-dependent...   114   3e-24
tr|B5GJI3|B5GJI3_9ACTO Tax_Id=465543 SubName: Full=ATP-dependent...   114   3e-24
tr|C2GJP0|C2GJP0_9CORY Tax_Id=548478 (clpS)SubName: Full=ATP-dep...   114   3e-24
sp|Q8NMQ1|CLPS_CORGL Tax_Id=1718 (clpS)RecName: Full=ATP-depende...   113   6e-24
tr|C0VU74|C0VU74_9CORY Tax_Id=548477 (clpS)SubName: Full=ATP-dep...   113   6e-24

>sp|B2HQI2|CLPS_MYCMM Tax_Id=216594 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Mycobacterium marinum]
          Length = 101

 Score =  205 bits (521), Expect = 2e-51
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK
Sbjct: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101


>sp|Q73X80|CLPS_MYCPA Tax_Id=1770 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Mycobacterium
           paratuberculosis]
          Length = 105

 Score =  184 bits (467), Expect = 3e-45
 Identities = 91/105 (86%), Positives = 96/105 (91%), Gaps = 4/105 (3%)

Query: 1   MVVASAP----AKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP 56
           MVV SAP    ++PG+ GQ+ESA  D TASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP
Sbjct: 1   MVVMSAPTEPKSRPGTTGQRESAPEDVTASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP 60

Query: 57  HATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           HATKLMLQVHNEG+AVVSAGSREAMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  HATKLMLQVHNEGKAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 105


>sp|A0QCZ8|CLPS_MYCA1 Tax_Id=243243 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Mycobacterium avium]
          Length = 105

 Score =  184 bits (467), Expect = 3e-45
 Identities = 91/105 (86%), Positives = 96/105 (91%), Gaps = 4/105 (3%)

Query: 1   MVVASAP----AKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP 56
           MVV SAP    ++PG+ GQ+ESA  D TASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP
Sbjct: 1   MVVMSAPTEPKSRPGTTGQRESAPEDVTASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP 60

Query: 57  HATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           HATKLMLQVHNEG+AVVSAGSREAMEVDVSKLHAAGLWATMQQDR
Sbjct: 61  HATKLMLQVHNEGKAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 105


>sp|P67647|CLPS_MYCTU Tax_Id=1773 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Mycobacterium
           tuberculosis]
          Length = 101

 Score =  177 bits (448), Expect = 4e-43
 Identities = 86/101 (85%), Positives = 91/101 (90%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           M V SAPAKPG+  Q+ESA  D T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           LMLQVHNEG+AVVSAGSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>sp|A5U231|CLPS_MYCTA Tax_Id=419947 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Mycobacterium tuberculosis]
          Length = 101

 Score =  177 bits (448), Expect = 4e-43
 Identities = 86/101 (85%), Positives = 91/101 (90%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           M V SAPAKPG+  Q+ESA  D T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           LMLQVHNEG+AVVSAGSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>sp|C1AMX6|CLPS_MYCBT Tax_Id=561275 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Mycobacterium bovis]
          Length = 101

 Score =  177 bits (448), Expect = 4e-43
 Identities = 86/101 (85%), Positives = 91/101 (90%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           M V SAPAKPG+  Q+ESA  D T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           LMLQVHNEG+AVVSAGSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>sp|A1KIC1|CLPS_MYCBP Tax_Id=410289 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Mycobacterium bovis]
          Length = 101

 Score =  177 bits (448), Expect = 4e-43
 Identities = 86/101 (85%), Positives = 91/101 (90%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           M V SAPAKPG+  Q+ESA  D T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           LMLQVHNEG+AVVSAGSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>sp|P67648|CLPS_MYCBO Tax_Id=1765 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Mycobacterium bovis]
          Length = 101

 Score =  177 bits (448), Expect = 4e-43
 Identities = 86/101 (85%), Positives = 91/101 (90%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           M V SAPAKPG+  Q+ESA  D T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           LMLQVHNEG+AVVSAGSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>tr|C6DTQ4|C6DTQ4_MYCTK Tax_Id=478434 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 101

 Score =  177 bits (448), Expect = 4e-43
 Identities = 86/101 (85%), Positives = 91/101 (90%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           M V SAPAKPG+  Q+ESA  D T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           LMLQVHNEG+AVVSAGSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>tr|A5WM17|A5WM17_MYCTF Tax_Id=336982 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 101

 Score =  177 bits (448), Expect = 4e-43
 Identities = 86/101 (85%), Positives = 91/101 (90%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           M V SAPAKPG+  Q+ESA  D T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           LMLQVHNEG+AVVSAGSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>tr|A4KGQ2|A4KGQ2_MYCTU Tax_Id=395095 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis str.
           Haarlem]
          Length = 101

 Score =  177 bits (448), Expect = 4e-43
 Identities = 86/101 (85%), Positives = 91/101 (90%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           M V SAPAKPG+  Q+ESA  D T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           LMLQVHNEG+AVVSAGSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>tr|A2VHM2|A2VHM2_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 101

 Score =  177 bits (448), Expect = 4e-43
 Identities = 86/101 (85%), Positives = 91/101 (90%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           M V SAPAKPG+  Q+ESA  D T   WVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATK
Sbjct: 1   MAVVSAPAKPGTTWQRESAPVDVTDRAWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATK 60

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           LMLQVHNEG+AVVSAGSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  LMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 101


>tr|A0R1X7|A0R1X7_MYCS2 Tax_Id=246196 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium
           smegmatis]
          Length = 100

 Score =  167 bits (423), Expect = 3e-40
 Identities = 80/100 (80%), Positives = 91/100 (91%)

Query: 2   VVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKL 61
           +V  A A+PG+  + + AS ++T +PWVTIVWDDPVNLM+YVTYVFQKLFGYSEPHATKL
Sbjct: 1   MVTPAKARPGTREEVDVASVESTEAPWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATKL 60

Query: 62  MLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           MLQVHNEG+AVVSAGSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 61  MLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR 100


>sp|P53423|CLPS_MYCLE Tax_Id=1769 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Mycobacterium leprae]
          Length = 108

 Score =  165 bits (417), Expect = 2e-39
 Identities = 83/105 (79%), Positives = 88/105 (83%), Gaps = 4/105 (3%)

Query: 1   MVVASAP----AKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP 56
           MVV  AP     +P +  Q ESA  D TA+ WVTIVWDDPVNLM YVTYVFQKLFGYSEP
Sbjct: 4   MVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEP 63

Query: 57  HATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           HATKLMLQVHNEG+AVVS GSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 64  HATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108


>tr|B8ZR53|B8ZR53_MYCLB Tax_Id=561304 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium leprae]
          Length = 108

 Score =  165 bits (417), Expect = 2e-39
 Identities = 83/105 (79%), Positives = 88/105 (83%), Gaps = 4/105 (3%)

Query: 1   MVVASAP----AKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEP 56
           MVV  AP     +P +  Q ESA  D TA+ WVTIVWDDPVNLM YVTYVFQKLFGYSEP
Sbjct: 4   MVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEP 63

Query: 57  HATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           HATKLMLQVHNEG+AVVS GSRE+MEVDVSKLHAAGLWATMQQDR
Sbjct: 64  HATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR 108


>tr|A1TD23|A1TD23_MYCVP Tax_Id=350058 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium
           vanbaalenii]
          Length = 100

 Score =  159 bits (403), Expect = 7e-38
 Identities = 75/100 (75%), Positives = 87/100 (87%)

Query: 2   VVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKL 61
           +V  A A+PG+   ++      T +PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKL
Sbjct: 1   MVTPAKARPGTREDRDVREDATTDAPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKL 60

Query: 62  MLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           M+QVHNEG+AVVSAGSRE+MEVDV++LHAAGLWAT+QQDR
Sbjct: 61  MMQVHNEGKAVVSAGSRESMEVDVTRLHAAGLWATLQQDR 100


>tr|Q1B576|Q1B576_MYCSS Tax_Id=164756 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium sp.]
          Length = 88

 Score =  157 bits (396), Expect = 5e-37
 Identities = 74/80 (92%), Positives = 78/80 (97%)

Query: 22  DATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAM 81
           +AT +PWVTIVWDDPVNLMTYVTYV QKLFGYSEPHATKLMLQVHNEG+AVVSAGSRE+M
Sbjct: 9   EATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESM 68

Query: 82  EVDVSKLHAAGLWATMQQDR 101
           EVDVSKLHAAGLWATMQQDR
Sbjct: 69  EVDVSKLHAAGLWATMQQDR 88


>tr|A3Q388|A3Q388_MYCSJ Tax_Id=164757 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium sp.]
          Length = 88

 Score =  157 bits (396), Expect = 5e-37
 Identities = 74/80 (92%), Positives = 78/80 (97%)

Query: 22  DATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAM 81
           +AT +PWVTIVWDDPVNLMTYVTYV QKLFGYSEPHATKLMLQVHNEG+AVVSAGSRE+M
Sbjct: 9   EATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESM 68

Query: 82  EVDVSKLHAAGLWATMQQDR 101
           EVDVSKLHAAGLWATMQQDR
Sbjct: 69  EVDVSKLHAAGLWATMQQDR 88


>tr|A1UJW1|A1UJW1_MYCSK Tax_Id=189918 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium sp.]
          Length = 88

 Score =  157 bits (396), Expect = 5e-37
 Identities = 74/80 (92%), Positives = 78/80 (97%)

Query: 22  DATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAM 81
           +AT +PWVTIVWDDPVNLMTYVTYV QKLFGYSEPHATKLMLQVHNEG+AVVSAGSRE+M
Sbjct: 9   EATDAPWVTIVWDDPVNLMTYVTYVLQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESM 68

Query: 82  EVDVSKLHAAGLWATMQQDR 101
           EVDVSKLHAAGLWATMQQDR
Sbjct: 69  EVDVSKLHAAGLWATMQQDR 88


>tr|A4T8H0|A4T8H0_MYCGI Tax_Id=350054 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Mycobacterium gilvum]
          Length = 100

 Score =  156 bits (395), Expect = 6e-37
 Identities = 74/100 (74%), Positives = 85/100 (85%)

Query: 2   VVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKL 61
           +V  A A+PG+   ++     A  +PWVTIVWDDPVNLMTYVTYV QKLFGY+EPHATKL
Sbjct: 1   MVTPAKARPGTREDRDVGEDAAADTPWVTIVWDDPVNLMTYVTYVLQKLFGYTEPHATKL 60

Query: 62  MLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           MLQVHNEG+AVVSAGSRE+ME DVS+LHAAGLWAT+QQDR
Sbjct: 61  MLQVHNEGKAVVSAGSRESMETDVSRLHAAGLWATLQQDR 100


>tr|B1MLY4|B1MLY4_MYCA9 Tax_Id=561007 SubName: Full=Probable
           ATP-dependent Clp protease adaptor protein
           ClpS;[Mycobacterium abscessus]
          Length = 100

 Score =  147 bits (371), Expect = 4e-34
 Identities = 70/98 (71%), Positives = 80/98 (81%)

Query: 4   ASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLML 63
           A A A PG+  ++     D T SPWVTIVWDDPVNLM YV YVFQ+LFGYSE  AT LML
Sbjct: 3   APARALPGTTAERSVEHVDETQSPWVTIVWDDPVNLMNYVAYVFQQLFGYSETEATNLML 62

Query: 64  QVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQDR 101
           QVH+EG+AVVS G+RE+ME+DVSKLHAAGLWAT+QQDR
Sbjct: 63  QVHHEGKAVVSCGARESMEIDVSKLHAAGLWATLQQDR 100


>tr|A0PUI1|A0PUI1_MYCUA Tax_Id=362242 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium ulcerans]
          Length = 70

 Score =  144 bits (364), Expect = 2e-33
 Identities = 69/70 (98%), Positives = 70/70 (100%)

Query: 32  VWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAA 91
           +WDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAA
Sbjct: 1   MWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAA 60

Query: 92  GLWATMQQDR 101
           GLWATMQQDR
Sbjct: 61  GLWATMQQDR 70


>sp|Q5Z0W0|CLPS_NOCFA Tax_Id=37329 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Nocardia farcinica]
          Length = 106

 Score =  133 bits (334), Expect = 7e-30
 Identities = 65/100 (65%), Positives = 80/100 (80%), Gaps = 2/100 (2%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           + +++A A P +V   E    +A   PWVT+VWDDPVNLM YVTY+FQKLFGYS+  AT+
Sbjct: 8   LTLSAAQATPEAVEYTEIL--EAEDRPWVTVVWDDPVNLMHYVTYIFQKLFGYSKAKATE 65

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQD 100
           LMLQVHNEG+AVVS+GSR+ ME DV +LHAAGLWATMQ+D
Sbjct: 66  LMLQVHNEGKAVVSSGSRDKMEHDVRRLHAAGLWATMQRD 105


>tr|C3JU49|C3JU49_RHOER Tax_Id=596309 (clpS)SubName:
           Full=ATP-dependent Clp protease adaptor protein
           ClpS;[Rhodococcus erythropolis SK121]
          Length = 162

 Score =  132 bits (331), Expect = 2e-29
 Identities = 65/98 (66%), Positives = 78/98 (79%), Gaps = 1/98 (1%)

Query: 4   ASAPAKPGSVGQQESASR-DATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLM 62
           A+A +   +  Q E+ S  +A   PWVTIVWDDPVNLM YVTYVFQKLFGYS+  AT LM
Sbjct: 63  ATASSPQATPEQSEAVSTIEAADRPWVTIVWDDPVNLMHYVTYVFQKLFGYSKAKATDLM 122

Query: 63  LQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQD 100
           +QVH+EG+AVVS+GSR+ ME DV +LHAAGLWATMQ+D
Sbjct: 123 MQVHSEGKAVVSSGSRDKMEADVRRLHAAGLWATMQRD 160


>tr|C1A1V7|C1A1V7_RHOE4 Tax_Id=234621 (clpS)SubName: Full=Putative
           ATP-dependent Clp protease adaptor protein
           ClpS;[Rhodococcus erythropolis]
          Length = 103

 Score =  130 bits (327), Expect = 5e-29
 Identities = 61/82 (74%), Positives = 71/82 (86%)

Query: 19  ASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSR 78
           A+ +A   PWVTIVWDDPVNLM YVTYVFQKLFGYS+  AT LM+QVH+EG+AVVS+GSR
Sbjct: 20  ATIEAADRPWVTIVWDDPVNLMHYVTYVFQKLFGYSKAKATDLMMQVHSEGKAVVSSGSR 79

Query: 79  EAMEVDVSKLHAAGLWATMQQD 100
           + ME DV +LHAAGLWATMQ+D
Sbjct: 80  DKMEADVRRLHAAGLWATMQRD 101


>tr|C6WNP2|C6WNP2_ACTMD Tax_Id=446462 SubName: Full=ATP-dependent
          Clp protease adaptor protein ClpS;[Actinosynnema mirum]
          Length = 99

 Score =  129 bits (324), Expect = 1e-28
 Identities = 59/84 (70%), Positives = 75/84 (89%), Gaps = 3/84 (3%)

Query: 16 QESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSA 75
          +E AS D   SPW+T+VW+DPVNLM+YVTYVFQK+FGYS+ HATKLM+ VH++GRAVVS+
Sbjct: 17 EEGASAD---SPWMTLVWNDPVNLMSYVTYVFQKVFGYSKDHATKLMMDVHHKGRAVVSS 73

Query: 76 GSREAMEVDVSKLHAAGLWATMQQ 99
          G+++ ME DV+KLHAAGLWATMQ+
Sbjct: 74 GAKDKMEADVAKLHAAGLWATMQR 97


>sp|C1AVW7|CLPS_RHOOB Tax_Id=632772 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Rhodococcus opacus]
          Length = 112

 Score =  128 bits (322), Expect = 2e-28
 Identities = 58/79 (73%), Positives = 70/79 (88%)

Query: 22  DATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAM 81
           +A   PWVT+VWDDPVNLM YVTY+FQKLFGYS+  AT+LM+QVH+EG+AVVS+GSR+ +
Sbjct: 32  EANDRPWVTVVWDDPVNLMHYVTYIFQKLFGYSKARATELMMQVHSEGKAVVSSGSRDKV 91

Query: 82  EVDVSKLHAAGLWATMQQD 100
           E DV KLHAAGLWATMQ+D
Sbjct: 92  ENDVRKLHAAGLWATMQRD 110


>tr|A4F902|A4F902_SACEN Tax_Id=405948 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Saccharopolyspora
           erythraea]
          Length = 97

 Score =  128 bits (321), Expect = 2e-28
 Identities = 60/95 (63%), Positives = 75/95 (78%), Gaps = 8/95 (8%)

Query: 6   APAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQV 65
           A   PG +G ++         PWVT+VW+DPVNLM+YVTYV QK+FGYS+ HATKLML V
Sbjct: 10  AQLDPGELGTEDK--------PWVTVVWNDPVNLMSYVTYVLQKIFGYSKDHATKLMLDV 61

Query: 66  HNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQD 100
           H++GRA VS+GS+E +E DV+KLHAAGLWATMQ+D
Sbjct: 62  HHKGRAAVSSGSKEKVEGDVAKLHAAGLWATMQKD 96


>sp|Q0SGS7|CLPS_RHOSR Tax_Id=101510 (clpS)RecName:
           Full=ATP-dependent Clp protease adapter protein
           clpS;[Rhodococcus sp.]
          Length = 112

 Score =  127 bits (320), Expect = 3e-28
 Identities = 58/79 (73%), Positives = 69/79 (87%)

Query: 22  DATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAM 81
           +A   PWVT+VWDDPVNLM YVTY+FQKLFGYS+  AT+LM+QVH+EG+AVVS+GSR+ +
Sbjct: 32  EANDRPWVTVVWDDPVNLMHYVTYIFQKLFGYSKAKATELMMQVHSEGKAVVSSGSRDKV 91

Query: 82  EVDVSKLHAAGLWATMQQD 100
           E DV KLHAAGLWATMQ D
Sbjct: 92  ENDVRKLHAAGLWATMQHD 110


>tr|C2AS57|C2AS57_TSUPA Tax_Id=521096 SubName: Full=Uncharacterized
           conserved protein, COG2127;[Tsukamurella paurometabola
           DSM 20162]
          Length = 109

 Score =  127 bits (320), Expect = 3e-28
 Identities = 63/103 (61%), Positives = 76/103 (73%), Gaps = 6/103 (5%)

Query: 4   ASAPAKPGSVGQQESASR------DATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPH 57
           A+AP  PG  GQ  SA+        A   PWVT+VWDDPVNLM+YVT+VF+K+FGYS   
Sbjct: 6   AAAPGSPGVSGQPGSAATLERETDRAIDKPWVTVVWDDPVNLMSYVTFVFRKVFGYSTSK 65

Query: 58  ATKLMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQD 100
           A +LM+QVH EG+AVVS G R+ +E DV KLHAAGLWATMQ+D
Sbjct: 66  AKELMMQVHTEGKAVVSTGDRDKVEGDVRKLHAAGLWATMQRD 108


>tr|D0L9M6|D0L9M6_GORB4 Tax_Id=526226 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Gordonia bronchialis]
          Length = 112

 Score =  125 bits (314), Expect = 2e-27
 Identities = 61/101 (60%), Positives = 74/101 (73%), Gaps = 5/101 (4%)

Query: 5   SAPAKPGSVGQQESASRDATAS-----PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHAT 59
           + P  PGS G   +    A  +     PW+TIVWDDPVNLM YVT+VFQK+FGYSE  A 
Sbjct: 11  ATPGGPGSGGAAVADPEVADGATDLDRPWMTIVWDDPVNLMRYVTFVFQKIFGYSESKAN 70

Query: 60  KLMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQD 100
           +LM+QVH EG+AVVS+G R+ +E DV KLHAAGLWATMQ+D
Sbjct: 71  QLMMQVHTEGKAVVSSGDRDKVETDVRKLHAAGLWATMQRD 111


>tr|C7MWD2|C7MWD2_SACVD Tax_Id=471857 SubName:
          Full=Uncharacterized conserved
          protein;[Saccharomonospora viridis]
          Length = 94

 Score =  125 bits (313), Expect = 2e-27
 Identities = 56/73 (76%), Positives = 68/73 (93%)

Query: 27 PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVS 86
          PW TIVW+DPVNLM+YVTYVFQK+FGYS+ HATKLML VH++GRAVVS+G++E +E DV+
Sbjct: 21 PWQTIVWNDPVNLMSYVTYVFQKIFGYSKEHATKLMLDVHHKGRAVVSSGTKEKVEGDVA 80

Query: 87 KLHAAGLWATMQQ 99
          KLHAAGLWATM+Q
Sbjct: 81 KLHAAGLWATMEQ 93


>tr|Q2JEP4|Q2JEP4_FRASC Tax_Id=106370 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Frankia sp.]
          Length = 119

 Score =  121 bits (304), Expect = 2e-26
 Identities = 54/74 (72%), Positives = 64/74 (86%)

Query: 27  PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVS 86
           PWVTIVW+DP+NLM+YVTYVFQKLFGYS+P ATKLML VH++GRA V+ G+RE ME D  
Sbjct: 46  PWVTIVWNDPINLMSYVTYVFQKLFGYSKPKATKLMLDVHHKGRASVAVGTREEMEADAE 105

Query: 87  KLHAAGLWATMQQD 100
           +LHA GLWAT+ QD
Sbjct: 106 RLHAYGLWATIAQD 119


>tr|C0U6K4|C0U6K4_9ACTO Tax_Id=526225 SubName: Full=Uncharacterized
           conserved protein, COG2127;[Geodermatophilus obscurus
           DSM 43160]
          Length = 98

 Score =  120 bits (302), Expect = 4e-26
 Identities = 57/96 (59%), Positives = 68/96 (70%)

Query: 5   SAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQ 64
           + P  P    ++          PWVTIVW+DPVNLMTYVTYV Q+LFGY EP AT LMLQ
Sbjct: 2   AGPLAPTRTPEETVEEHGDLDRPWVTIVWNDPVNLMTYVTYVLQELFGYDEPTATTLMLQ 61

Query: 65  VHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQD 100
           VH EG+A+VS+G RE ME D S+LHA GLWA+ Q+D
Sbjct: 62  VHEEGKAIVSSGPRERMEHDTSRLHAYGLWASYQRD 97


>tr|C1RJ77|C1RJ77_9CELL Tax_Id=446466 SubName:
          Full=Uncharacterized conserved protein,
          COG2127;[Cellulomonas flavigena DSM 20109]
          Length = 100

 Score =  120 bits (301), Expect = 5e-26
 Identities = 61/99 (61%), Positives = 72/99 (72%), Gaps = 2/99 (2%)

Query: 1  MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
          MVV  A   P +    + AS  +TA  WVTIVW+DPVNLMTYVTYVFQ  FGY+   A +
Sbjct: 1  MVVVPATTAPDTRPDVDEAS--STADAWVTIVWNDPVNLMTYVTYVFQTHFGYAREKAER 58

Query: 61 LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQ 99
          LM QVH EGRAVVS G+REAMEVDV  +H+ GLWAT+Q+
Sbjct: 59 LMRQVHEEGRAVVSTGNREAMEVDVQAMHSYGLWATLQR 97


>sp|Q6NFN0|CLPS_CORDI Tax_Id=1717 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Corynebacterium
           diphtheriae]
          Length = 113

 Score =  119 bits (298), Expect = 1e-25
 Identities = 56/99 (56%), Positives = 72/99 (72%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           +V++S+ A P    +       +   PW+ IVWDDPVNLM+YVTYVFQ + GYS+  AT+
Sbjct: 13  VVLSSSMATPSLDEEMAVEVASSENLPWMCIVWDDPVNLMSYVTYVFQTILGYSKKRATE 72

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQ 99
           LM+QVH EG+AVVS+G R+ +E DV KLH AGLWATMQQ
Sbjct: 73  LMMQVHTEGKAVVSSGERDKVEADVKKLHTAGLWATMQQ 111


>tr|D1BZD3|D1BZD3_9MICO Tax_Id=446471 SubName: Full=ATP-dependent
          Clp protease adaptor protein ClpS;[Xylanimonas
          cellulosilytica DSM 15894]
          Length = 106

 Score =  118 bits (295), Expect = 2e-25
 Identities = 55/85 (64%), Positives = 64/85 (75%)

Query: 15 QQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVS 74
          + ++A+  + A PWVTIVW+DPVNLMTYVTYVF+  FGY    A  LMLQVH EGRAVVS
Sbjct: 15 ETDTAASTSLADPWVTIVWNDPVNLMTYVTYVFESYFGYPPARARTLMLQVHREGRAVVS 74

Query: 75 AGSREAMEVDVSKLHAAGLWATMQQ 99
           G RE MEVDV  +H  GLWATMQ+
Sbjct: 75 TGPRERMEVDVQAMHGFGLWATMQR 99


>tr|A0LVK3|A0LVK3_ACIC1 Tax_Id=351607 SubName: Full=ATP-dependent
          Clp protease adaptor protein ClpS;[Acidothermus
          cellulolyticus]
          Length = 96

 Score =  117 bits (293), Expect = 4e-25
 Identities = 60/97 (61%), Positives = 71/97 (73%), Gaps = 2/97 (2%)

Query: 3  VASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLM 62
          +A     P  V + ES  R  T  PWVTIVW+DPVNLM+YVTYVFQKLFGY +  A KLM
Sbjct: 1  MADMSTAPVEVERPESDVRPDT--PWVTIVWNDPVNLMSYVTYVFQKLFGYPKEKAEKLM 58

Query: 63 LQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQ 99
          LQVH EG+AVVS G RE ME D ++LHA GLWAT+++
Sbjct: 59 LQVHYEGKAVVSTGRREQMENDAARLHAHGLWATVRR 95


>tr|A8M4H4|A8M4H4_SALAI Tax_Id=391037 SubName: Full=ATP-dependent
          Clp protease adaptor protein ClpS;[Salinispora
          arenicola]
          Length = 96

 Score =  117 bits (292), Expect = 5e-25
 Identities = 54/73 (73%), Positives = 63/73 (86%)

Query: 27 PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVS 86
          PWVTIVWDDPVNLMTYVT+VFQKLFGYS   A +LML VH++GRAVV++GSRE ME D S
Sbjct: 23 PWVTIVWDDPVNLMTYVTWVFQKLFGYSRERAEQLMLDVHHKGRAVVTSGSRERMEHDAS 82

Query: 87 KLHAAGLWATMQQ 99
          +LHA GLWAT+ +
Sbjct: 83 QLHAYGLWATVDR 95


>tr|C4RAZ2|C4RAZ2_9ACTO Tax_Id=219305 SubName: Full=ATP-dependent
          Clp protease adaptor protein clpS;[Micromonospora sp.
          ATCC 39149]
          Length = 96

 Score =  116 bits (290), Expect = 9e-25
 Identities = 53/73 (72%), Positives = 63/73 (86%)

Query: 27 PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVS 86
          PWVTIVWDDPVNLM+YVT+VFQKLFGYS   A KLML VH++GRAVVS G+RE ME D +
Sbjct: 23 PWVTIVWDDPVNLMSYVTWVFQKLFGYSRERAEKLMLDVHHKGRAVVSTGARERMEHDAA 82

Query: 87 KLHAAGLWATMQQ 99
          +LHA GLWAT+++
Sbjct: 83 QLHAYGLWATVER 95


>tr|B5HNV9|B5HNV9_9ACTO Tax_Id=463191 SubName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Streptomyces sviceus
           ATCC 29083]
          Length = 105

 Score =  116 bits (290), Expect = 9e-25
 Identities = 55/75 (73%), Positives = 63/75 (84%)

Query: 27  PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVS 86
           PWVTIV +DPVNLM+YVTYVFQ  FGYS+  ATKLML VH++GRAVVS+GSRE ME DV 
Sbjct: 30  PWVTIVHNDPVNLMSYVTYVFQTYFGYSKDKATKLMLDVHHKGRAVVSSGSREEMERDVQ 89

Query: 87  KLHAAGLWATMQQDR 101
            +H  GLWAT+QQDR
Sbjct: 90  AMHGYGLWATLQQDR 104


>sp|Q9S2G5|CLPS_STRCO Tax_Id=1902 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Streptomyces
           coelicolor]
          Length = 96

 Score =  115 bits (289), Expect = 1e-24
 Identities = 54/75 (72%), Positives = 63/75 (84%)

Query: 27  PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVS 86
           PWVTIV +DPVNLM+YVTYVFQ  FGYS+  ATKLM+ VH++GRAVVS+GSRE ME DV 
Sbjct: 21  PWVTIVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMMDVHHKGRAVVSSGSREEMERDVQ 80

Query: 87  KLHAAGLWATMQQDR 101
            +H  GLWAT+QQDR
Sbjct: 81  AMHGYGLWATLQQDR 95


>tr|Q0RQM3|Q0RQM3_FRAAA Tax_Id=326424 (clpS)SubName:
           Full=ATP-dependent Clp protease adaptor protein
           clpS;[Frankia alni]
          Length = 91

 Score =  115 bits (289), Expect = 1e-24
 Identities = 51/74 (68%), Positives = 63/74 (85%)

Query: 27  PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVS 86
           PWVTIVW+DP+NLM+YVTYVFQKLFGY++  AT+LML VH++GRA V+ G+RE ME D  
Sbjct: 18  PWVTIVWNDPINLMSYVTYVFQKLFGYTKSKATELMLDVHHKGRASVATGTREEMEADAE 77

Query: 87  KLHAAGLWATMQQD 100
           +LHA GLWAT+ QD
Sbjct: 78  RLHAYGLWATIAQD 91


>tr|C8XFX3|C8XFX3_NAKMY Tax_Id=479431 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Nakamurella
           multipartita]
          Length = 103

 Score =  115 bits (289), Expect = 1e-24
 Identities = 59/99 (59%), Positives = 70/99 (70%), Gaps = 5/99 (5%)

Query: 2   VVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKL 61
           V A AP K GS     + +     +PWVTIVW+DPVNLM+YVT VFQKL G+  P A  L
Sbjct: 9   VTAPAPEKTGS-----TETVTTPEAPWVTIVWNDPVNLMSYVTLVFQKLLGHPRPKAEAL 63

Query: 62  MLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQD 100
           ML VH++GRA VS+G RE ME DV+KL AAGLWATM +D
Sbjct: 64  MLDVHHKGRATVSSGPREKMEADVAKLQAAGLWATMAKD 102


>sp|Q82D28|CLPS_STRAW Tax_Id=33903 (clpS)RecName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Streptomyces
           avermitilis]
          Length = 105

 Score =  115 bits (287), Expect = 2e-24
 Identities = 54/75 (72%), Positives = 63/75 (84%)

Query: 27  PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVS 86
           PWVTIV +DPVNLM+YVTYVFQ  FGYS+  ATKLML VH++GRAVVS+G+RE ME DV 
Sbjct: 30  PWVTIVHNDPVNLMSYVTYVFQTYFGYSKDKATKLMLDVHHKGRAVVSSGTREEMERDVQ 89

Query: 87  KLHAAGLWATMQQDR 101
            +H  GLWAT+QQDR
Sbjct: 90  AMHGYGLWATLQQDR 104


>tr|C5BY86|C5BY86_BEUC1 Tax_Id=471853 SubName: Full=ATP-dependent
           Clp protease adaptor protein ClpS;[Beutenbergia
           cavernae]
          Length = 113

 Score =  114 bits (286), Expect = 3e-24
 Identities = 54/100 (54%), Positives = 69/100 (69%)

Query: 1   MVVASAPAKPGSVGQQESASRDATASPWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATK 60
           +V +++P  P    ++   +      PW TIVW+DPVNLM+YVTYVFQ  FGYS   A K
Sbjct: 12  VVASTSPVSPTPTQERAGETAVRHDRPWHTIVWNDPVNLMSYVTYVFQTYFGYSRAKAEK 71

Query: 61  LMLQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQD 100
           LM QVH EG+++VS GSRE MEVDV  +H+ GLWAT+ QD
Sbjct: 72  LMRQVHTEGKSIVSHGSRERMEVDVQAMHSYGLWATLGQD 111


>tr|B5GJI3|B5GJI3_9ACTO Tax_Id=465543 SubName: Full=ATP-dependent
           Clp protease adapter protein clpS;[Streptomyces sp.
           SPB74]
          Length = 102

 Score =  114 bits (286), Expect = 3e-24
 Identities = 53/74 (71%), Positives = 62/74 (83%)

Query: 28  WVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVSK 87
           W+T+V +DPVNLM+YVTYVFQ  FGYS+  ATKLML VHN+GRAVVS+GSRE ME DV  
Sbjct: 28  WITLVHNDPVNLMSYVTYVFQSYFGYSKDKATKLMLDVHNKGRAVVSSGSREEMERDVQA 87

Query: 88  LHAAGLWATMQQDR 101
           +H  GLWAT+QQDR
Sbjct: 88  MHGYGLWATLQQDR 101


>tr|C2GJP0|C2GJP0_9CORY Tax_Id=548478 (clpS)SubName:
          Full=ATP-dependent Clp protease adaptor protein
          ClpS;[Corynebacterium glucuronolyticum ATCC 51866]
          Length = 100

 Score =  114 bits (285), Expect = 3e-24
 Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 2/97 (2%)

Query: 5  SAPAKPGSVGQQESASRDATAS--PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLM 62
          S PA P +    +     AT+   PW+ IVWDDPVNLM+YVT+VF  + GYS   AT+LM
Sbjct: 2  SMPASPLATPDVDVDVEVATSENLPWMCIVWDDPVNLMSYVTHVFMTMLGYSRKRATELM 61

Query: 63 LQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQ 99
          +QVH EG+AVVS+G R+ +E DV K+H AGLWATMQQ
Sbjct: 62 MQVHTEGKAVVSSGERDKVEADVKKMHTAGLWATMQQ 98


>sp|Q8NMQ1|CLPS_CORGL Tax_Id=1718 (clpS)RecName:
          Full=ATP-dependent Clp protease adapter protein
          clpS;[Corynebacterium glutamicum]
          Length = 100

 Score =  113 bits (283), Expect = 6e-24
 Identities = 50/73 (68%), Positives = 62/73 (84%)

Query: 27 PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLMLQVHNEGRAVVSAGSREAMEVDVS 86
          PW+ IVWDDPVNLM+YVTYVFQ + G+S+  AT+LM+QVH EG+AVVS+G ++ +E DV 
Sbjct: 26 PWLCIVWDDPVNLMSYVTYVFQTVLGFSKKRATELMMQVHTEGKAVVSSGEKDKVEGDVK 85

Query: 87 KLHAAGLWATMQQ 99
          KLH AGLWATMQQ
Sbjct: 86 KLHTAGLWATMQQ 98


>tr|C0VU74|C0VU74_9CORY Tax_Id=548477 (clpS)SubName:
          Full=ATP-dependent Clp protease adaptor protein
          ClpS;[Corynebacterium glucuronolyticum ATCC 51867]
          Length = 100

 Score =  113 bits (283), Expect = 6e-24
 Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 2/97 (2%)

Query: 5  SAPAKPGSVGQQESASRDATAS--PWVTIVWDDPVNLMTYVTYVFQKLFGYSEPHATKLM 62
          S PA P +    +     AT+   PW+ IVWDDPVNLM+YVT+VF  + GYS   AT+LM
Sbjct: 2  SMPALPLATPDVDVDVEVATSENLPWMCIVWDDPVNLMSYVTHVFMTMLGYSRKRATELM 61

Query: 63 LQVHNEGRAVVSAGSREAMEVDVSKLHAAGLWATMQQ 99
          +QVH EG+AVVS+G R+ +E DV K+H AGLWATMQQ
Sbjct: 62 MQVHTEGKAVVSSGERDKVEADVKKMHTAGLWATMQQ 98


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.315    0.125    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 714,567,996
Number of extensions: 23520204
Number of successful extensions: 64529
Number of sequences better than 10.0: 738
Number of HSP's gapped: 64915
Number of HSP's successfully gapped: 738
Length of query: 101
Length of database: 3,846,993,858
Length adjustment: 70
Effective length of query: 31
Effective length of database: 3,057,729,648
Effective search space: 94789619088
Effective search space used: 94789619088
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)