BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4189 (571 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HRG6|B2HRG6_MYCMM Tax_Id=216594 (deaD)SubName: Full=Cold-sh... 1008 0.0 tr|A0QCK5|A0QCK5_MYCA1 Tax_Id=243243 SubName: Full=ATP-dependent... 887 0.0 tr|Q73WY9|Q73WY9_MYCPA Tax_Id=1770 (deaD)SubName: Full=DeaD;[Myc... 884 0.0 tr|Q7U0A2|Q7U0A2_MYCBO Tax_Id=1765 (deaD)SubName: Full=PROBABLE ... 849 0.0 tr|C1AMP7|C1AMP7_MYCBT Tax_Id=561275 (deaD)SubName: Full=Putativ... 849 0.0 tr|A1KI41|A1KI41_MYCBP Tax_Id=410289 (deaD)SubName: Full=Probabl... 849 0.0 sp|Q11039|DEAD_MYCTU Tax_Id=1773 (deaD)RecName: Full=Cold-shock ... 848 0.0 tr|C6DUB8|C6DUB8_MYCTK Tax_Id=478434 SubName: Full=Cold shock de... 848 0.0 tr|A5U1V1|A5U1V1_MYCTA Tax_Id=419947 (deaD)SubName: Full=ATP-dep... 848 0.0 tr|A5WLT3|A5WLT3_MYCTF Tax_Id=336982 SubName: Full=Cold-shock de... 848 0.0 tr|A2VHE8|A2VHE8_MYCTU Tax_Id=348776 SubName: Full=Cold-shock de... 848 0.0 tr|A0R2A4|A0R2A4_MYCS2 Tax_Id=246196 SubName: Full=ATP-dependent... 792 0.0 tr|B1MLR2|B1MLR2_MYCA9 Tax_Id=561007 SubName: Full=Probable cold... 780 0.0 tr|Q1B4W2|Q1B4W2_MYCSS Tax_Id=164756 SubName: Full=DEAD/DEAH box... 768 0.0 tr|A3Q3M9|A3Q3M9_MYCSJ Tax_Id=164757 SubName: Full=DEAD/DEAH box... 768 0.0 tr|A1UK75|A1UK75_MYCSK Tax_Id=189918 SubName: Full=DEAD/DEAH box... 768 0.0 tr|A4T8U3|A4T8U3_MYCGI Tax_Id=350054 SubName: Full=DEAD/DEAH box... 755 0.0 tr|A1TDJ5|A1TDJ5_MYCVP Tax_Id=350058 SubName: Full=DEAD/DEAH box... 751 0.0 tr|Q0S3S1|Q0S3S1_RHOSR Tax_Id=101510 SubName: Full=Probable cold... 738 0.0 tr|C1AZS3|C1AZS3_RHOOB Tax_Id=632772 (deaD)SubName: Full=ATP-dep... 738 0.0 tr|C1A2G7|C1A2G7_RHOE4 Tax_Id=234621 (deaD)SubName: Full=Probabl... 714 0.0 tr|C3JTM9|C3JTM9_RHOER Tax_Id=596309 SubName: Full=Cold-shock DE... 714 0.0 tr|Q5YQK7|Q5YQK7_NOCFA Tax_Id=37329 (deaD)SubName: Full=Putative... 711 0.0 tr|C2AS76|C2AS76_TSUPA Tax_Id=521096 SubName: Full=ATP-dependent... 699 0.0 tr|D0L9Q4|D0L9Q4_GORB4 Tax_Id=526226 SubName: Full=DEAD/DEAH box... 693 0.0 tr|C4LJP9|C4LJP9_CORK4 Tax_Id=645127 SubName: Full=ATP-dependent... 622 e-176 tr|A1SQL1|A1SQL1_NOCSJ Tax_Id=196162 SubName: Full=DEAD/DEAH box... 622 e-176 tr|A4FMF6|A4FMF6_SACEN Tax_Id=405948 (deaD)SubName: Full=ATP-dep... 618 e-175 tr|C8NVE0|C8NVE0_9CORY Tax_Id=585529 (deaD2)SubName: Full=ATP-de... 614 e-174 tr|Q8FQ74|Q8FQ74_COREF Tax_Id=152794 SubName: Full=Putative cold... 611 e-173 tr|C8NKV2|C8NKV2_COREF Tax_Id=196164 (deaD)SubName: Full=ATP-dep... 611 e-173 tr|C2GIZ2|C2GIZ2_9CORY Tax_Id=548478 SubName: Full=Superfamily I... 610 e-172 tr|C0VTD2|C0VTD2_9CORY Tax_Id=548477 SubName: Full=Superfamily I... 610 e-172 tr|A3TS87|A3TS87_9MICO Tax_Id=313589 SubName: Full=ATP-dependent... 604 e-171 tr|Q6NHW2|Q6NHW2_CORDI Tax_Id=1717 (deaD)SubName: Full=DEAD-box ... 603 e-170 tr|Q6AEM1|Q6AEM1_LEIXX Tax_Id=59736 (deaD)SubName: Full=ATP-depe... 602 e-170 tr|B8HD71|B8HD71_ARTCA Tax_Id=452863 SubName: Full=DEAD/DEAH box... 602 e-170 tr|A4QDC0|A4QDC0_CORGB Tax_Id=340322 SubName: Full=Putative unch... 601 e-170 tr|A1R913|A1R913_ARTAT Tax_Id=290340 SubName: Full=Putative ATP-... 599 e-169 tr|A4AJZ0|A4AJZ0_9ACTN Tax_Id=312284 SubName: Full=ATP-dependent... 599 e-169 tr|C0E7B2|C0E7B2_9CORY Tax_Id=566549 SubName: Full=Putative unch... 598 e-169 tr|Q8NR96|Q8NR96_CORGL Tax_Id=1718 SubName: Full=Superfamily II ... 598 e-169 tr|A9WNH6|A9WNH6_RENSM Tax_Id=288705 SubName: Full=ATP-dependent... 597 e-168 tr|A0JZF7|A0JZF7_ARTS2 Tax_Id=290399 SubName: Full=DEAD/DEAH box... 597 e-168 tr|Q6M617|Q6M617_CORGL Tax_Id=1718 SubName: Full=Superfamily II ... 595 e-168 tr|C0XQJ2|C0XQJ2_9CORY Tax_Id=525263 SubName: Full=Superfamily I... 595 e-168 tr|A5CQB6|A5CQB6_CLAM3 Tax_Id=443906 SubName: Full=Putative ATP-... 595 e-168 tr|C5VDV6|C5VDV6_9CORY Tax_Id=553207 SubName: Full=Cold-shock DE... 595 e-168 tr|B0RE04|B0RE04_CLAMS Tax_Id=31964 (deaD)SubName: Full=Cold-sho... 592 e-167 tr|Q4JUG8|Q4JUG8_CORJK Tax_Id=306537 (deaD)SubName: Full=ATP-dep... 592 e-167 >tr|B2HRG6|B2HRG6_MYCMM Tax_Id=216594 (deaD)SubName: Full=Cold-shock DEAD-Box protein, DeaD;[Mycobacterium marinum] Length = 571 Score = 1008 bits (2606), Expect = 0.0 Identities = 527/558 (94%), Positives = 527/558 (94%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS Sbjct: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA Sbjct: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF Sbjct: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA Sbjct: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH LLFVSPRERHLLKLIEKATRQ Sbjct: 314 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALLFVSPRERHLLKLIEKATRQ 373 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA Sbjct: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 LQSRDGEEFLLAPDPPPDQ SGGAFSTYRISVGKRHKVGPGAIV Sbjct: 434 LQSRDGEEFLLAPDPPPDQRERHPRNERKERPERRRSGGAFSTYRISVGKRHKVGPGAIV 493 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK Sbjct: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 Query: 554 AYKARRNDGGKPRRKRLG 571 AYKARRNDGGKPRRKRLG Sbjct: 554 AYKARRNDGGKPRRKRLG 571 >tr|A0QCK5|A0QCK5_MYCA1 Tax_Id=243243 SubName: Full=ATP-dependent rna helicase, dead/deah box family protein;[Mycobacterium avium] Length = 566 Score = 887 bits (2291), Expect = 0.0 Identities = 462/555 (83%), Positives = 493/555 (88%), Gaps = 5/555 (0%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHPSV+RAIADVGYE+PTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS Sbjct: 14 TFADLQIHPSVLRAIADVGYETPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID STATQALVLAPTRELALQVAEAFSRYGAHL ++NVLP+YGGSSYA+QLAGL+RGA Sbjct: 74 KIDVASTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGSSYAVQLAGLKRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGRVIDHLER TLDLS VDYLVLDEADEMLTMGFAE+V+RILSETPEYKQVALF Sbjct: 134 HVVVGTPGRVIDHLERGTLDLSHVDYLVLDEADEMLTMGFAEEVDRILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRK+T +YLHDPLEV ++AKT TAENISQRYIQVAGPRKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKLTAKYLHDPLEVSTKAKTTTAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEEVAE+LRARGFSAAAINGDIPQGQRERT+ AL+DGGIDILVATDVAA Sbjct: 254 AMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTVAALKDGGIDILVATDVAA 313 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH LLFVSPRERHLLK IEKATRQ Sbjct: 314 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRERHLLKAIEKATRQ 373 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 LTEAELPTVEDVNAQRVAKFADSIT AL GI+LFR+LV+DYEREH+VPMADIAAALA Sbjct: 374 PLTEAELPTVEDVNAQRVAKFADSITAALGAPGIDLFRKLVQDYEREHDVPMADIAAALA 433 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +QSRDGEEFL+AP+PP ++ S +TYRI+VGKRHK+GPGAIV Sbjct: 434 VQSRDGEEFLMAPEPPRER--RERHTERRERTEKPRSTRPLATYRIAVGKRHKIGPGAIV 491 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFGHI IGPDFSLVELP KLP+ TLK+LEQTRISGVLINL+PDR Sbjct: 492 GAIANEGGLHRSDFGHIAIGPDFSLVELPAKLPKSTLKRLEQTRISGVLINLQPDR---A 548 Query: 554 AYKARRNDGGKPRRK 568 A KAR DGGKPRRK Sbjct: 549 AAKARGRDGGKPRRK 563 >tr|Q73WY9|Q73WY9_MYCPA Tax_Id=1770 (deaD)SubName: Full=DeaD;[Mycobacterium paratuberculosis] Length = 566 Score = 884 bits (2284), Expect = 0.0 Identities = 461/555 (83%), Positives = 492/555 (88%), Gaps = 5/555 (0%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHPSV+RAIADVGYE+PTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS Sbjct: 14 TFADLQIHPSVLRAIADVGYETPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID STATQALVLAPTRELALQVAEAFSRYGAHL ++NVLP+YGGSSYA+QLAGL+RGA Sbjct: 74 KIDAASTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGSSYAVQLAGLKRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGRVIDHLER TLDLS VDYLVLDEADEMLTMGFAE+V+RILSETPEYKQVALF Sbjct: 134 HVVVGTPGRVIDHLERGTLDLSHVDYLVLDEADEMLTMGFAEEVDRILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRK+T +YLHDPLEV ++AKT TAENISQRYIQVAGPRKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKLTAKYLHDPLEVSTKAKTTTAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEEVAE+LRARGFSAAAINGDIPQGQRERT+ AL+DGGIDILVATDVAA Sbjct: 254 AMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTVAALKDGGIDILVATDVAA 313 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH LLFVSPRERHLLK IEKATRQ Sbjct: 314 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRERHLLKAIEKATRQ 373 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 LTEAELPTVEDVNAQRVAKFADSIT AL GI+LFR+LV+DYEREH+VPMADIAAALA Sbjct: 374 PLTEAELPTVEDVNAQRVAKFADSITAALGAPGIDLFRKLVQDYEREHDVPMADIAAALA 433 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +QSRDGEEFL+AP+PP ++ S +TYRI+VGKRHK+GPGAIV Sbjct: 434 VQSRDGEEFLMAPEPPRER--RERHTERRERTEKPRSTRPLATYRIAVGKRHKIGPGAIV 491 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFGHI IGP FSLVELP KLP+ TLK+LEQTRISGVLINL+PDR Sbjct: 492 GAIANEGGLHRSDFGHIAIGPGFSLVELPAKLPKSTLKRLEQTRISGVLINLQPDR---A 548 Query: 554 AYKARRNDGGKPRRK 568 A KAR DGGKPRRK Sbjct: 549 AAKARGRDGGKPRRK 563 >tr|Q7U0A2|Q7U0A2_MYCBO Tax_Id=1765 (deaD)SubName: Full=PROBABLE COLD-SHOCK DEAD-BOX PROTEIN A HOMOLOG DEAD (ATP-dependent RNA helicase deaD homolog);[Mycobacterium bovis] Length = 563 Score = 849 bits (2193), Expect = 0.0 Identities = 448/558 (80%), Positives = 479/558 (85%), Gaps = 8/558 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RAI DVGYESPT IQAATIPALMAGSDVVGLAQTGTGKTAAFAIP+LS Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID TS QALVL PTRELALQVAEAF RYGA+LS+LNVLP+YGGSSYA+QLAGLRRGA Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLER TLDLSRVD+LVLDEADEMLTMGFA+DVERILSETPEYKQVALF Sbjct: 134 QVVVGTPGRVIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRK++ +YLHDP EV +AKTA AENISQ YIQVA RKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVA--RKMDALTRVLEVEPFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEE+AEKLRARGFSAAAI+GD+PQ QRERTITALRDG IDILVATDVAA Sbjct: 252 AMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH L+FVSPRE HLLK IEKATRQ Sbjct: 312 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TLTEA+LPTVEDVN QRVAKFADSIT+AL GIELFRRLVE+YEREH+VPMADIAAALA Sbjct: 372 TLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALA 431 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +Q R GE FL+APDPP + +TYR++VGKRHK+GPGAIV Sbjct: 432 VQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRPD---LTTYRVAVGKRHKIGPGAIV 488 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFG I IGPDFSLVELP KLPR TLKKL QTRISGVLI+LRP RP D Sbjct: 489 GAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKLAQTRISGVLIDLRPYRPPD- 547 Query: 554 AYKARRNDGGKPRRKRLG 571 ARR++GGKPRRK +G Sbjct: 548 --AARRHNGGKPRRKHVG 563 >tr|C1AMP7|C1AMP7_MYCBT Tax_Id=561275 (deaD)SubName: Full=Putative cold-shock dead-box protein a homolog;[Mycobacterium bovis] Length = 563 Score = 849 bits (2193), Expect = 0.0 Identities = 448/558 (80%), Positives = 479/558 (85%), Gaps = 8/558 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RAI DVGYESPT IQAATIPALMAGSDVVGLAQTGTGKTAAFAIP+LS Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID TS QALVL PTRELALQVAEAF RYGA+LS+LNVLP+YGGSSYA+QLAGLRRGA Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLER TLDLSRVD+LVLDEADEMLTMGFA+DVERILSETPEYKQVALF Sbjct: 134 QVVVGTPGRVIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRK++ +YLHDP EV +AKTA AENISQ YIQVA RKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVA--RKMDALTRVLEVEPFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEE+AEKLRARGFSAAAI+GD+PQ QRERTITALRDG IDILVATDVAA Sbjct: 252 AMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH L+FVSPRE HLLK IEKATRQ Sbjct: 312 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TLTEA+LPTVEDVN QRVAKFADSIT+AL GIELFRRLVE+YEREH+VPMADIAAALA Sbjct: 372 TLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALA 431 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +Q R GE FL+APDPP + +TYR++VGKRHK+GPGAIV Sbjct: 432 VQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRPD---LTTYRVAVGKRHKIGPGAIV 488 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFG I IGPDFSLVELP KLPR TLKKL QTRISGVLI+LRP RP D Sbjct: 489 GAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKLAQTRISGVLIDLRPYRPPD- 547 Query: 554 AYKARRNDGGKPRRKRLG 571 ARR++GGKPRRK +G Sbjct: 548 --AARRHNGGKPRRKHVG 563 >tr|A1KI41|A1KI41_MYCBP Tax_Id=410289 (deaD)SubName: Full=Probable cold-shock dead-box protein a homolog deaD;[Mycobacterium bovis] Length = 563 Score = 849 bits (2193), Expect = 0.0 Identities = 448/558 (80%), Positives = 479/558 (85%), Gaps = 8/558 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RAI DVGYESPT IQAATIPALMAGSDVVGLAQTGTGKTAAFAIP+LS Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID TS QALVL PTRELALQVAEAF RYGA+LS+LNVLP+YGGSSYA+QLAGLRRGA Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLER TLDLSRVD+LVLDEADEMLTMGFA+DVERILSETPEYKQVALF Sbjct: 134 QVVVGTPGRVIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRK++ +YLHDP EV +AKTA AENISQ YIQVA RKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVA--RKMDALTRVLEVEPFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEE+AEKLRARGFSAAAI+GD+PQ QRERTITALRDG IDILVATDVAA Sbjct: 252 AMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH L+FVSPRE HLLK IEKATRQ Sbjct: 312 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TLTEA+LPTVEDVN QRVAKFADSIT+AL GIELFRRLVE+YEREH+VPMADIAAALA Sbjct: 372 TLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALA 431 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +Q R GE FL+APDPP + +TYR++VGKRHK+GPGAIV Sbjct: 432 VQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRPD---LTTYRVAVGKRHKIGPGAIV 488 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFG I IGPDFSLVELP KLPR TLKKL QTRISGVLI+LRP RP D Sbjct: 489 GAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKLAQTRISGVLIDLRPYRPPD- 547 Query: 554 AYKARRNDGGKPRRKRLG 571 ARR++GGKPRRK +G Sbjct: 548 --AARRHNGGKPRRKHVG 563 >sp|Q11039|DEAD_MYCTU Tax_Id=1773 (deaD)RecName: Full=Cold-shock DEAD box protein A homolog; EC=3.6.1.-; AltName: Full=ATP-dependent RNA helicase deaD homolog;[Mycobacterium tuberculosis] Length = 563 Score = 848 bits (2190), Expect = 0.0 Identities = 447/558 (80%), Positives = 479/558 (85%), Gaps = 8/558 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RAI DVGYESPT IQAATIPALMAGSDVVGLAQTGTGKTAAFAIP+LS Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID TS QALVL PTRELALQVAEAF RYGA+LS+LNVLP+YGGSSYA+QLAGLRRGA Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGR+IDHLER TLDLSRVD+LVLDEADEMLTMGFA+DVERILSETPEYKQVALF Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRK++ +YLHDP EV +AKTA AENISQ YIQVA RKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVA--RKMDALTRVLEVEPFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEE+AEKLRARGFSAAAI+GD+PQ QRERTITALRDG IDILVATDVAA Sbjct: 252 AMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH L+FVSPRE HLLK IEKATRQ Sbjct: 312 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TLTEA+LPTVEDVN QRVAKFADSIT+AL GIELFRRLVE+YEREH+VPMADIAAALA Sbjct: 372 TLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALA 431 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +Q R GE FL+APDPP + +TYR++VGKRHK+GPGAIV Sbjct: 432 VQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRPD---LTTYRVAVGKRHKIGPGAIV 488 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFG I IGPDFSLVELP KLPR TLKKL QTRISGVLI+LRP RP D Sbjct: 489 GAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKLAQTRISGVLIDLRPYRPPD- 547 Query: 554 AYKARRNDGGKPRRKRLG 571 ARR++GGKPRRK +G Sbjct: 548 --AARRHNGGKPRRKHVG 563 >tr|C6DUB8|C6DUB8_MYCTK Tax_Id=478434 SubName: Full=Cold shock deaD-box protein A deaD;[Mycobacterium tuberculosis] Length = 563 Score = 848 bits (2190), Expect = 0.0 Identities = 447/558 (80%), Positives = 479/558 (85%), Gaps = 8/558 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RAI DVGYESPT IQAATIPALMAGSDVVGLAQTGTGKTAAFAIP+LS Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID TS QALVL PTRELALQVAEAF RYGA+LS+LNVLP+YGGSSYA+QLAGLRRGA Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGR+IDHLER TLDLSRVD+LVLDEADEMLTMGFA+DVERILSETPEYKQVALF Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRK++ +YLHDP EV +AKTA AENISQ YIQVA RKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVA--RKMDALTRVLEVEPFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEE+AEKLRARGFSAAAI+GD+PQ QRERTITALRDG IDILVATDVAA Sbjct: 252 AMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH L+FVSPRE HLLK IEKATRQ Sbjct: 312 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TLTEA+LPTVEDVN QRVAKFADSIT+AL GIELFRRLVE+YEREH+VPMADIAAALA Sbjct: 372 TLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALA 431 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +Q R GE FL+APDPP + +TYR++VGKRHK+GPGAIV Sbjct: 432 VQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRPD---LTTYRVAVGKRHKIGPGAIV 488 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFG I IGPDFSLVELP KLPR TLKKL QTRISGVLI+LRP RP D Sbjct: 489 GAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKLAQTRISGVLIDLRPYRPPD- 547 Query: 554 AYKARRNDGGKPRRKRLG 571 ARR++GGKPRRK +G Sbjct: 548 --AARRHNGGKPRRKHVG 563 >tr|A5U1V1|A5U1V1_MYCTA Tax_Id=419947 (deaD)SubName: Full=ATP-dependent RNA helicase DeaD;[Mycobacterium tuberculosis] Length = 563 Score = 848 bits (2190), Expect = 0.0 Identities = 447/558 (80%), Positives = 479/558 (85%), Gaps = 8/558 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RAI DVGYESPT IQAATIPALMAGSDVVGLAQTGTGKTAAFAIP+LS Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID TS QALVL PTRELALQVAEAF RYGA+LS+LNVLP+YGGSSYA+QLAGLRRGA Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGR+IDHLER TLDLSRVD+LVLDEADEMLTMGFA+DVERILSETPEYKQVALF Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRK++ +YLHDP EV +AKTA AENISQ YIQVA RKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVA--RKMDALTRVLEVEPFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEE+AEKLRARGFSAAAI+GD+PQ QRERTITALRDG IDILVATDVAA Sbjct: 252 AMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH L+FVSPRE HLLK IEKATRQ Sbjct: 312 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TLTEA+LPTVEDVN QRVAKFADSIT+AL GIELFRRLVE+YEREH+VPMADIAAALA Sbjct: 372 TLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALA 431 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +Q R GE FL+APDPP + +TYR++VGKRHK+GPGAIV Sbjct: 432 VQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRPD---LTTYRVAVGKRHKIGPGAIV 488 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFG I IGPDFSLVELP KLPR TLKKL QTRISGVLI+LRP RP D Sbjct: 489 GAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKLAQTRISGVLIDLRPYRPPD- 547 Query: 554 AYKARRNDGGKPRRKRLG 571 ARR++GGKPRRK +G Sbjct: 548 --AARRHNGGKPRRKHVG 563 >tr|A5WLT3|A5WLT3_MYCTF Tax_Id=336982 SubName: Full=Cold-shock deaD-box protein A deaD (ATP-dependent RNA helicase);[Mycobacterium tuberculosis] Length = 563 Score = 848 bits (2190), Expect = 0.0 Identities = 447/558 (80%), Positives = 479/558 (85%), Gaps = 8/558 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RAI DVGYESPT IQAATIPALMAGSDVVGLAQTGTGKTAAFAIP+LS Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID TS QALVL PTRELALQVAEAF RYGA+LS+LNVLP+YGGSSYA+QLAGLRRGA Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGR+IDHLER TLDLSRVD+LVLDEADEMLTMGFA+DVERILSETPEYKQVALF Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRK++ +YLHDP EV +AKTA AENISQ YIQVA RKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVA--RKMDALTRVLEVEPFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEE+AEKLRARGFSAAAI+GD+PQ QRERTITALRDG IDILVATDVAA Sbjct: 252 AMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH L+FVSPRE HLLK IEKATRQ Sbjct: 312 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TLTEA+LPTVEDVN QRVAKFADSIT+AL GIELFRRLVE+YEREH+VPMADIAAALA Sbjct: 372 TLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALA 431 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +Q R GE FL+APDPP + +TYR++VGKRHK+GPGAIV Sbjct: 432 VQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRPD---LTTYRVAVGKRHKIGPGAIV 488 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFG I IGPDFSLVELP KLPR TLKKL QTRISGVLI+LRP RP D Sbjct: 489 GAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKLAQTRISGVLIDLRPYRPPD- 547 Query: 554 AYKARRNDGGKPRRKRLG 571 ARR++GGKPRRK +G Sbjct: 548 --AARRHNGGKPRRKHVG 563 >tr|A2VHE8|A2VHE8_MYCTU Tax_Id=348776 SubName: Full=Cold-shock deaD-box protein A deaD (ATP-dependent RNA helicase);[Mycobacterium tuberculosis C] Length = 563 Score = 848 bits (2190), Expect = 0.0 Identities = 447/558 (80%), Positives = 479/558 (85%), Gaps = 8/558 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RAI DVGYESPT IQAATIPALMAGSDVVGLAQTGTGKTAAFAIP+LS Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID TS QALVL PTRELALQVAEAF RYGA+LS+LNVLP+YGGSSYA+QLAGLRRGA Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGR+IDHLER TLDLSRVD+LVLDEADEMLTMGFA+DVERILSETPEYKQVALF Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRK++ +YLHDP EV +AKTA AENISQ YIQVA RKMDALTRVLEVEPFE Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVA--RKMDALTRVLEVEPFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEE+AEKLRARGFSAAAI+GD+PQ QRERTITALRDG IDILVATDVAA Sbjct: 252 AMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH L+FVSPRE HLLK IEKATRQ Sbjct: 312 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TLTEA+LPTVEDVN QRVAKFADSIT+AL GIELFRRLVE+YEREH+VPMADIAAALA Sbjct: 372 TLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADIAAALA 431 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +Q R GE FL+APDPP + +TYR++VGKRHK+GPGAIV Sbjct: 432 VQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRPD---LTTYRVAVGKRHKIGPGAIV 488 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFG I IGPDFSLVELP KLPR TLKKL QTRISGVLI+LRP RP D Sbjct: 489 GAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATLKKLAQTRISGVLIDLRPYRPPD- 547 Query: 554 AYKARRNDGGKPRRKRLG 571 ARR++GGKPRRK +G Sbjct: 548 --AARRHNGGKPRRKHVG 563 >tr|A0R2A4|A0R2A4_MYCS2 Tax_Id=246196 SubName: Full=ATP-dependent rna helicase, dead/deah box family protein;[Mycobacterium smegmatis] Length = 581 Score = 792 bits (2045), Expect = 0.0 Identities = 414/558 (74%), Positives = 468/558 (83%), Gaps = 9/558 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP+V++A+ DVGYESP+ IQAATIP ++AGSDVVGLAQTGTGKTAAFAIPILS Sbjct: 22 TFADLQIHPAVLQAVTDVGYESPSAIQAATIPPMLAGSDVVGLAQTGTGKTAAFAIPILS 81 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KIDT+ TQALVLAPTRELALQVAEAF RYG+HL ++NVLP+YGGSSY +QL+GLRRGA Sbjct: 82 KIDTSRRDTQALVLAPTRELALQVAEAFGRYGSHLPQVNVLPIYGGSSYTVQLSGLRRGA 141 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLER TLDLS++DYLVLDEADEMLTMGFAE+VERIL++TPEYKQVALF Sbjct: 142 QVVVGTPGRVIDHLERGTLDLSKLDYLVLDEADEMLTMGFAEEVERILADTPEYKQVALF 201 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP AIRKITT+YLHDP+EV +AKTATAENISQR+IQVAGPRKMDALTR+LEVE + Sbjct: 202 SATMPAAIRKITTKYLHDPVEVTVKAKTATAENISQRFIQVAGPRKMDALTRILEVEEGD 261 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEEVA++L+ARGF+AAAINGDI Q QRERTI+AL+DG IDIL+ATDVAA Sbjct: 262 AMIVFVRTKQATEEVADRLKARGFAAAAINGDINQAQRERTISALKDGTIDILIATDVAA 321 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHV+NYDIPHDTESYVH +LFV+PRERHLLK IEKATR Sbjct: 322 RGLDVERISHVINYDIPHDTESYVHRIGRTGRAGRSGHAVLFVTPRERHLLKSIEKATRS 381 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L EAELP+VEDVNAQRVAKF DSI+ +L+ GI+LFRRL+EDYERE NVP+ADIAAALA Sbjct: 382 KLIEAELPSVEDVNAQRVAKFRDSISDSLNAPGIDLFRRLIEDYERESNVPLADIAAALA 441 Query: 434 LQSRDGEEFLLAPDPPP---DQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPG 490 +Q+R+GEEFL+ PP D+ +TYRI VGKRHKVGPG Sbjct: 442 VQTRNGEEFLMTEPPPDKRRDRDRDRDDRGDRGPRKERPPREGLATYRIDVGKRHKVGPG 501 Query: 491 AIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRP 550 IVGAIANEGGLHR++FGHITI D+SLVELP KLP++TLK LE TRISGVLINL+PDR Sbjct: 502 HIVGAIANEGGLHRNEFGHITIRLDYSLVELPEKLPKKTLKALENTRISGVLINLQPDR- 560 Query: 551 ADKAYKARRNDGGKPRRK 568 RR GKP K Sbjct: 561 -----GPRREGAGKPSGK 573 >tr|B1MLR2|B1MLR2_MYCA9 Tax_Id=561007 SubName: Full=Probable cold-shock DEAD box protein A homolog (ATP-dependent RNA helicase DEAD homolog);[Mycobacterium abscessus] Length = 598 Score = 780 bits (2015), Expect = 0.0 Identities = 411/555 (74%), Positives = 455/555 (81%), Gaps = 9/555 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADL I P V+RA++DVGYE+P+ IQAATIP L+AGSDVVGLAQTGTGKTAAFAIPILS Sbjct: 24 TFADLHIAPEVLRAVSDVGYETPSAIQAATIPPLLAGSDVVGLAQTGTGKTAAFAIPILS 83 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID TS TQALVLAPTRELALQVAEAF RYGAH+ +LNVLP+YGG SY +QLAGL+RGA Sbjct: 84 KIDLTSKDTQALVLAPTRELALQVAEAFGRYGAHMPKLNVLPIYGGQSYVVQLAGLKRGA 143 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLER TLDLS +DYLVLDEADEMLTMGFAEDVERIL++TPEYKQVALF Sbjct: 144 QVVVGTPGRVIDHLERGTLDLSHLDYLVLDEADEMLTMGFAEDVERILADTPEYKQVALF 203 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP IR++T +YLHDP+E+K +AKT+TAENI+QR+IQVAGPRKMDALTR+LEVE FE Sbjct: 204 SATMPTTIRRLTKKYLHDPVEIKIDAKTSTAENITQRFIQVAGPRKMDALTRILEVETFE 263 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEEVA+KL+ARGF+AAAINGDI Q QRERTI AL+ G IDILVATDVAA Sbjct: 264 AMIVFVRTKQATEEVADKLKARGFAAAAINGDINQSQRERTINALKAGTIDILVATDVAA 323 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHDTESYVH +LFVSPRERHLLK IEK T Sbjct: 324 RGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTAVLFVSPRERHLLKAIEKTTGA 383 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E LP+VEDVNAQRV KF D+IT AL+ +ELFRRLVEDYER++NVP+ADIAAALA Sbjct: 384 KLAEEPLPSVEDVNAQRVTKFRDAITAALAAPEVELFRRLVEDYERDNNVPVADIAAALA 443 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 + SRDGE+FLL PDPP + +TYRI+VGKRHKV PGAIV Sbjct: 444 VLSRDGEQFLLQPDPPREPRHERGERPDRGPRGERPRTPGLATYRIAVGKRHKVMPGAIV 503 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGLHRSDFGHITI PD SLVELP KL +TLK LE TRISGVLI+LRP Sbjct: 504 GAIANEGGLHRSDFGHITIRPDHSLVELPAKLSPKTLKALENTRISGVLIDLRP------ 557 Query: 554 AYKARRNDGGKPRRK 568 A DG +P RK Sbjct: 558 ---AGGPDGARPDRK 569 >tr|Q1B4W2|Q1B4W2_MYCSS Tax_Id=164756 SubName: Full=DEAD/DEAH box helicase-like protein;[Mycobacterium sp.] Length = 557 Score = 768 bits (1984), Expect = 0.0 Identities = 399/545 (73%), Positives = 451/545 (82%), Gaps = 1/545 (0%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RA+ DVGYE+P+ IQAATIPA++AGSDVVGLAQTGTGKTAAFAIPILS Sbjct: 14 TFADLQIHPEVLRAVTDVGYETPSAIQAATIPAMLAGSDVVGLAQTGTGKTAAFAIPILS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID S ATQALVLAPTRELALQVAEAF RYGAHL +NVLPVYGGSSY Q+AGL+RGA Sbjct: 74 KIDPNSRATQALVLAPTRELALQVAEAFGRYGAHLP-VNVLPVYGGSSYGPQMAGLKRGA 132 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLE+ +LDLS +DY+VLDEADEML MGFAEDVERILS+TPEYKQVALF Sbjct: 133 QVVVGTPGRVIDHLEKGSLDLSHLDYMVLDEADEMLQMGFAEDVERILSDTPEYKQVALF 192 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPP I+KIT +YLHDP+EV ++KT TAENI+QRYIQV+ PRKMDALTR+LE E + Sbjct: 193 SATMPPGIKKITKKYLHDPVEVTVKSKTQTAENITQRYIQVSYPRKMDALTRLLETEQGD 252 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 MIVFVRTKQATEEVAEKLRARGF+AAAINGDIPQ RERTI+ L+DG IDILVATDVAA Sbjct: 253 GMIVFVRTKQATEEVAEKLRARGFAAAAINGDIPQAVRERTISQLKDGSIDILVATDVAA 312 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHV+N+DIPHD ESYVH LLFV+PRERHLL IE+ TRQ Sbjct: 313 RGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTALLFVTPRERHLLNSIERVTRQ 372 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E +LP+VEDVNAQRV KF DSI AL+ GI+LFRRL+EDYER++NVP+ADIAAALA Sbjct: 373 KLVEIQLPSVEDVNAQRVEKFRDSIGEALNAPGIDLFRRLIEDYERDNNVPLADIAAALA 432 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +QSR+GEEFL+ PP + + +TYRI+VGKRHKV PGAIV Sbjct: 433 VQSRNGEEFLMTEPPPEKRRERPVRDESGPRKARDRTRSDLATYRIAVGKRHKVMPGAIV 492 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGL+RSDFGHI I P++SLVELP LP++TLKKLE+TRI GVLINL PDR Sbjct: 493 GAIANEGGLNRSDFGHIAIKPEYSLVELPADLPKDTLKKLERTRIQGVLINLEPDRGPKA 552 Query: 554 AYKAR 558 YK + Sbjct: 553 RYKGK 557 >tr|A3Q3M9|A3Q3M9_MYCSJ Tax_Id=164757 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium sp.] Length = 557 Score = 768 bits (1984), Expect = 0.0 Identities = 399/545 (73%), Positives = 451/545 (82%), Gaps = 1/545 (0%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RA+ DVGYE+P+ IQAATIPA++AGSDVVGLAQTGTGKTAAFAIPILS Sbjct: 14 TFADLQIHPEVLRAVTDVGYETPSAIQAATIPAMLAGSDVVGLAQTGTGKTAAFAIPILS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID S ATQALVLAPTRELALQVAEAF RYGAHL +NVLPVYGGSSY Q+AGL+RGA Sbjct: 74 KIDPNSRATQALVLAPTRELALQVAEAFGRYGAHLP-VNVLPVYGGSSYGPQMAGLKRGA 132 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLE+ +LDLS +DY+VLDEADEML MGFAEDVERILS+TPEYKQVALF Sbjct: 133 QVVVGTPGRVIDHLEKGSLDLSHLDYMVLDEADEMLQMGFAEDVERILSDTPEYKQVALF 192 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPP I+KIT +YLHDP+EV ++KT TAENI+QRYIQV+ PRKMDALTR+LE E + Sbjct: 193 SATMPPGIKKITKKYLHDPVEVTVKSKTQTAENITQRYIQVSYPRKMDALTRLLETEQGD 252 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 MIVFVRTKQATEEVAEKLRARGF+AAAINGDIPQ RERTI+ L+DG IDILVATDVAA Sbjct: 253 GMIVFVRTKQATEEVAEKLRARGFAAAAINGDIPQAVRERTISQLKDGSIDILVATDVAA 312 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHV+N+DIPHD ESYVH LLFV+PRERHLL IE+ TRQ Sbjct: 313 RGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTALLFVTPRERHLLNSIERVTRQ 372 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E +LP+VEDVNAQRV KF DSI AL+ GI+LFRRL+EDYER++NVP+ADIAAALA Sbjct: 373 KLVEIQLPSVEDVNAQRVEKFRDSIGEALNAPGIDLFRRLIEDYERDNNVPLADIAAALA 432 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +QSR+GEEFL+ PP + + +TYRI+VGKRHKV PGAIV Sbjct: 433 VQSRNGEEFLMTEPPPEKRRERPVRDESGPRKARDRTRSDLATYRIAVGKRHKVMPGAIV 492 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGL+RSDFGHI I P++SLVELP LP++TLKKLE+TRI GVLINL PDR Sbjct: 493 GAIANEGGLNRSDFGHIAIKPEYSLVELPADLPKDTLKKLERTRIQGVLINLEPDRGPKA 552 Query: 554 AYKAR 558 YK + Sbjct: 553 RYKGK 557 >tr|A1UK75|A1UK75_MYCSK Tax_Id=189918 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium sp.] Length = 557 Score = 768 bits (1984), Expect = 0.0 Identities = 399/545 (73%), Positives = 451/545 (82%), Gaps = 1/545 (0%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP V+RA+ DVGYE+P+ IQAATIPA++AGSDVVGLAQTGTGKTAAFAIPILS Sbjct: 14 TFADLQIHPEVLRAVTDVGYETPSAIQAATIPAMLAGSDVVGLAQTGTGKTAAFAIPILS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID S ATQALVLAPTRELALQVAEAF RYGAHL +NVLPVYGGSSY Q+AGL+RGA Sbjct: 74 KIDPNSRATQALVLAPTRELALQVAEAFGRYGAHLP-VNVLPVYGGSSYGPQMAGLKRGA 132 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLE+ +LDLS +DY+VLDEADEML MGFAEDVERILS+TPEYKQVALF Sbjct: 133 QVVVGTPGRVIDHLEKGSLDLSHLDYMVLDEADEMLQMGFAEDVERILSDTPEYKQVALF 192 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPP I+KIT +YLHDP+EV ++KT TAENI+QRYIQV+ PRKMDALTR+LE E + Sbjct: 193 SATMPPGIKKITKKYLHDPVEVTVKSKTQTAENITQRYIQVSYPRKMDALTRLLETEQGD 252 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 MIVFVRTKQATEEVAEKLRARGF+AAAINGDIPQ RERTI+ L+DG IDILVATDVAA Sbjct: 253 GMIVFVRTKQATEEVAEKLRARGFAAAAINGDIPQAVRERTISQLKDGSIDILVATDVAA 312 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHV+N+DIPHD ESYVH LLFV+PRERHLL IE+ TRQ Sbjct: 313 RGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTALLFVTPRERHLLNSIERVTRQ 372 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E +LP+VEDVNAQRV KF DSI AL+ GI+LFRRL+EDYER++NVP+ADIAAALA Sbjct: 373 KLVEIQLPSVEDVNAQRVEKFRDSIGEALNAPGIDLFRRLIEDYERDNNVPLADIAAALA 432 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 +QSR+GEEFL+ PP + + +TYRI+VGKRHKV PGAIV Sbjct: 433 VQSRNGEEFLMTEPPPEKRRERPVRDESGPRKARDRTRSDLATYRIAVGKRHKVMPGAIV 492 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GAIANEGGL+RSDFGHI I P++SLVELP LP++TLKKLE+TRI GVLINL PDR Sbjct: 493 GAIANEGGLNRSDFGHIAIKPEYSLVELPADLPKDTLKKLERTRIQGVLINLEPDRGPKA 552 Query: 554 AYKAR 558 YK + Sbjct: 553 RYKGK 557 >tr|A4T8U3|A4T8U3_MYCGI Tax_Id=350054 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium gilvum] Length = 559 Score = 755 bits (1949), Expect = 0.0 Identities = 397/538 (73%), Positives = 446/538 (82%), Gaps = 2/538 (0%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP+V++A+ADVGYESP+ IQAATIPA++ GSDVVGLAQTGTGKTAAFAIPILS Sbjct: 14 TFADLQIHPAVLKAVADVGYESPSPIQAATIPAILEGSDVVGLAQTGTGKTAAFAIPILS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KIDT S TQALVLAPTRELALQVAEAF RYGA L R+NVLP+YGGSSY QLAGL+RGA Sbjct: 74 KIDTDSRNTQALVLAPTRELALQVAEAFGRYGAQL-RVNVLPIYGGSSYVPQLAGLKRGA 132 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLE+ +LDLS +DYLVLDEADEML MGFAEDVERIL++TPEYKQVALF Sbjct: 133 QVVVGTPGRVIDHLEKGSLDLSHLDYLVLDEADEMLQMGFAEDVERILADTPEYKQVALF 192 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAI+KIT +YLHDP+EV ++KT TAENI+QRY V+ PRKMDALTR+LE E + Sbjct: 193 SATMPPAIKKITAKYLHDPVEVTVKSKTQTAENITQRYFLVSYPRKMDALTRLLETEQGD 252 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEEVAEKLRARGF+A+AINGDIPQ RERTI L+DG IDILVATDVAA Sbjct: 253 AMIVFVRTKQATEEVAEKLRARGFAASAINGDIPQAVRERTIAQLKDGTIDILVATDVAA 312 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHV+N+DIPHD ESYVH LLFV+PRERHLL IE+ TRQ Sbjct: 313 RGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTALLFVTPRERHLLGAIERVTRQ 372 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E+ELP+V+DVN +RVAKF DSIT AL GI+LFR LVE YER+H+VPMADIAAALA Sbjct: 373 KLVESELPSVDDVNEKRVAKFRDSITDALDKPGIDLFRTLVEGYERDHDVPMADIAAALA 432 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 LQSR+GEEFL+ +PPP++ +TYRI+VGKRHKV PGAIV Sbjct: 433 LQSRNGEEFLMT-EPPPEKRRERPERGDASPRKPRERRSDLATYRIAVGKRHKVAPGAIV 491 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPA 551 GAIANEGGLHRSDFGHITI D SLVELP KLP +TLK L+ T+I G LI L+PDR A Sbjct: 492 GAIANEGGLHRSDFGHITIKMDHSLVELPAKLPGKTLKALQNTKIQGQLIQLQPDRGA 549 >tr|A1TDJ5|A1TDJ5_MYCVP Tax_Id=350058 SubName: Full=DEAD/DEAH box helicase domain protein;[Mycobacterium vanbaalenii] Length = 564 Score = 751 bits (1940), Expect = 0.0 Identities = 401/561 (71%), Positives = 453/561 (80%), Gaps = 19/561 (3%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADLQIHP+V++A+ADVGYE+P+ IQAATIPA++ GSDVVGLAQTGTGKTAAFAIPILS Sbjct: 14 TFADLQIHPAVLQAVADVGYETPSPIQAATIPAILDGSDVVGLAQTGTGKTAAFAIPILS 73 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KIDT S TQALVLAPTRELALQVAEAF RYGAHL R+NVLP+YGG+SY QL+GL+RGA Sbjct: 74 KIDTDSRNTQALVLAPTRELALQVAEAFGRYGAHL-RVNVLPIYGGASYVPQLSGLKRGA 132 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 QVVVGTPGRVIDHLE+ +LDLS +DYLVLDEADEML MGFAEDVERIL++TPEYKQVALF Sbjct: 133 QVVVGTPGRVIDHLEKGSLDLSHLDYLVLDEADEMLQMGFAEDVERILADTPEYKQVALF 192 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAI+KIT +YLHDP+EV ++KT TAENI+QRY V+ PRKMDALTR+LEVE + Sbjct: 193 SATMPPAIKKITAKYLHDPVEVTVKSKTQTAENITQRYFLVSYPRKMDALTRLLEVEQGD 252 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQATEEVAEKLR+RGF+AAAINGDIPQ RERTI+ L+DG IDILVATDVAA Sbjct: 253 AMIVFVRTKQATEEVAEKLRSRGFAAAAINGDIPQAVRERTISQLKDGTIDILVATDVAA 312 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHV+N+DIPHD ESYVH LLFV+PRERHLL IE+ TRQ Sbjct: 313 RGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTALLFVTPRERHLLGAIERVTRQ 372 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E+ELP+VEDVN +RVAKF DSIT AL GI+LFR L+E YER+H+VPMADIAAALA Sbjct: 373 KLVESELPSVEDVNEKRVAKFRDSITDALEKPGIDLFRTLIEGYERDHDVPMADIAAALA 432 Query: 434 LQSRDGEEFLLAPDPPPD-----QXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVG 488 LQSR+GEEFL+ +PPP+ + +TYRI+VGKRHKV Sbjct: 433 LQSRNGEEFLMT-EPPPEKRRERRERDGRDGDDRGPRKPRERRSDLATYRIAVGKRHKVA 491 Query: 489 PGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPD 548 PGAIVGAIANEGGLHRSDFGHITI D+SLVELP KL +TLK LE TRI G LI+L PD Sbjct: 492 PGAIVGAIANEGGLHRSDFGHITIKVDYSLVELPAKLSHKTLKALENTRIQGQLIHLEPD 551 Query: 549 RPADKAYKARRNDGGKPRRKR 569 R G KP R R Sbjct: 552 R------------GPKPHRGR 560 >tr|Q0S3S1|Q0S3S1_RHOSR Tax_Id=101510 SubName: Full=Probable cold-shock DEAD-box protein;[Rhodococcus sp.] Length = 586 Score = 738 bits (1906), Expect = 0.0 Identities = 386/567 (68%), Positives = 454/567 (80%), Gaps = 11/567 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADL I V++A++DVGYESP+ IQAATIP L+AG+DVVGLAQTGTGKTAAFA+PILS Sbjct: 12 TFADLDIDDRVLKALSDVGYESPSPIQAATIPPLLAGNDVVGLAQTGTGKTAAFAVPILS 71 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID T + QALVLAPTRELALQVAEAF +Y AH+ L+VLP+YGG SY +QL+GLRRGA Sbjct: 72 KIDLTQKSPQALVLAPTRELALQVAEAFGKYSAHIPGLHVLPIYGGQSYGVQLSGLRRGA 131 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGRVIDHLE+ TLDLS++ YLVLDEADEML MGF EDVERIL++TPEYKQVALF Sbjct: 132 HVVVGTPGRVIDHLEKGTLDLSKLSYLVLDEADEMLKMGFQEDVERILADTPEYKQVALF 191 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP AIRKI+ +Y+HDP+E+ ++KT+TA NISQRY+QVA RK+DALTRVLEVE FE Sbjct: 192 SATMPGAIRKISKQYMHDPVEITMKSKTSTASNISQRYVQVAHQRKLDALTRVLEVEDFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMI+FVRTKQATE++AEKLR+RGFSA+AINGDI Q QRERTI L+ G +DILVATDVAA Sbjct: 252 AMIIFVRTKQATEDLAEKLRSRGFSASAINGDIVQAQRERTIGQLKSGALDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHV+NYDIPHDTESYVH LLFV+PRERHLLK IEKATRQ Sbjct: 312 RGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRAGEALLFVAPRERHLLKAIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E +LP+V+DVNAQRV+KF DSIT +L++ + LFR+++EDYE+EH+VP+ADIAAALA Sbjct: 372 PLAEMQLPSVDDVNAQRVSKFGDSITESLTSDNLALFRKMIEDYEQEHDVPLADIAAALA 431 Query: 434 LQSRDGEEFLLAPDPP--------PDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRH 485 +QSRDGE FL+AP+PP P + G +TYRI+VGKRH Sbjct: 432 VQSRDGEAFLMAPEPPPAPRREREPRERPARRFDEGPPTRSRGPEGQELATYRIAVGKRH 491 Query: 486 KVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINL 545 +V PGAIVGAIANEGGL RSDFGHI+I PD SLVELP L ETL+ L +TRISGVLI L Sbjct: 492 RVVPGAIVGAIANEGGLRRSDFGHISIRPDHSLVELPADLSSETLEALRRTRISGVLIQL 551 Query: 546 RPDR-PADKAYKARRND--GGKPRRKR 569 +PD P + R+D GGK +R R Sbjct: 552 QPDSGPPSGRPRGGRDDRAGGKFQRDR 578 >tr|C1AZS3|C1AZS3_RHOOB Tax_Id=632772 (deaD)SubName: Full=ATP-dependent DEAD-box RNA helicase DeaD; EC=3.6.1.-;[Rhodococcus opacus] Length = 587 Score = 738 bits (1905), Expect = 0.0 Identities = 387/568 (68%), Positives = 455/568 (80%), Gaps = 12/568 (2%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADL I V++A++DVGYESP+ IQAATIP L+AG+DVVGLAQTGTGKTAAFA+PILS Sbjct: 12 TFADLDIDDRVLKALSDVGYESPSPIQAATIPPLLAGNDVVGLAQTGTGKTAAFAVPILS 71 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID T + QALVLAPTRELALQVAEAF +Y AH+ L+VLP+YGG SY +QL+GLRRGA Sbjct: 72 KIDLTQKSPQALVLAPTRELALQVAEAFGKYSAHIPGLHVLPIYGGQSYGVQLSGLRRGA 131 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGRVIDHLE+ TLDLS++ YLVLDEADEML MGF EDVERILS+TPEYKQVALF Sbjct: 132 HVVVGTPGRVIDHLEKGTLDLSKLAYLVLDEADEMLKMGFQEDVERILSDTPEYKQVALF 191 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP AIRKI+ +YLHDP+E+ ++KT+TA NISQRY+QVA RK+DALTRVLEVE F Sbjct: 192 SATMPGAIRKISKQYLHDPVEITVKSKTSTASNISQRYVQVAHQRKLDALTRVLEVEDFG 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMI+FVRTKQATE++AE+LR+RGFSAAAINGDI Q QRERTI L+ G +DILVATDVAA Sbjct: 252 AMIIFVRTKQATEDLAERLRSRGFSAAAINGDIVQAQRERTIGQLKSGALDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHV+NYDIPHDTESYVH LLFV+PRERHLLK IEKATRQ Sbjct: 312 RGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRAGEALLFVAPRERHLLKAIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E +LP+V+DVNAQRV+KF DSIT +L++ + LFR+++EDYE+EH+VP+ADIAAALA Sbjct: 372 PLAEMQLPSVDDVNAQRVSKFGDSITESLTSDNLALFRKMIEDYEQEHDVPLADIAAALA 431 Query: 434 LQSRDGEEFLLAPDPP--------PDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRH 485 +QSRDGE FL+AP+PP P + G +TYRI+VGKRH Sbjct: 432 VQSRDGEAFLMAPEPPPAPRREREPRERPARRFDDGPPTRSRGPEGQELATYRIAVGKRH 491 Query: 486 KVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINL 545 +V PGAIVGAIANEGGL RSDFGHI+I PD SLVELP L ETL+ L +TRISGVLI L Sbjct: 492 RVVPGAIVGAIANEGGLRRSDFGHISIRPDHSLVELPADLSSETLEALRRTRISGVLIQL 551 Query: 546 RPDR--PADKAYKARRND--GGKPRRKR 569 +PD P+ + + R+D GGK +R R Sbjct: 552 QPDSGPPSGRPGRGGRDDRAGGKFQRDR 579 >tr|C1A2G7|C1A2G7_RHOE4 Tax_Id=234621 (deaD)SubName: Full=Probable ATP-dependent RNA helicase DeaD; EC=3.6.1.-;[Rhodococcus erythropolis] Length = 591 Score = 714 bits (1844), Expect = 0.0 Identities = 375/571 (65%), Positives = 448/571 (78%), Gaps = 16/571 (2%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADL I V++A++DVGYESP+ IQAATIP L+ G DVVGLAQTGTGKTAAFA+P+LS Sbjct: 12 TFADLDIDDRVLKALSDVGYESPSPIQAATIPPLLEGKDVVGLAQTGTGKTAAFAVPVLS 71 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 +IDT+ TQALVLAPTRELALQVAEAF +Y AH+ LNVLP+YGG SY +QL+GLRRGA Sbjct: 72 RIDTSIKQTQALVLAPTRELALQVAEAFGKYSAHIPGLNVLPIYGGQSYGVQLSGLRRGA 131 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGRVIDHLE+ TLDL+ + YLVLDEADEML MGF EDVERIL +TP KQVALF Sbjct: 132 HVVVGTPGRVIDHLEKGTLDLTNLKYLVLDEADEMLKMGFQEDVERILRDTPGDKQVALF 191 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP +IR+I+ +YL++P+E+ ++KT+TA NI+QRYIQVA RK+DALTRVLEVE FE Sbjct: 192 SATMPGSIRRISKQYLNNPVEITVKSKTSTASNITQRYIQVAHQRKLDALTRVLEVEAFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMI+FVRTKQATE++AEKLRARG SAAAINGDI Q QRERTI L++G +DILVATDVAA Sbjct: 252 AMIIFVRTKQATEDLAEKLRARGHSAAAINGDIVQAQRERTIGQLKNGALDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHV+NYDIPHDTESYVH LLFV+PRERHLLK IEKATRQ Sbjct: 312 RGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRQGDALLFVAPRERHLLKSIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E +LP+V+DVNAQRVAKF DSIT +L++ + +FR+++EDY++EH+VP+ DIAAALA Sbjct: 372 PLAEMQLPSVDDVNAQRVAKFGDSITESLASENLAMFRKMIEDYDQEHDVPLIDIAAALA 431 Query: 434 LQSRDGEEFLLAPDPPP---------DQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKR 484 LQSRDGE FLL+P+PP + G + YRI+VGKR Sbjct: 432 LQSRDGEAFLLSPEPPAPPRREREPREPRPPRRFDDGPAPRSRGPEGQELAAYRIAVGKR 491 Query: 485 HKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLIN 544 H+V PGAIVGAIANEGGL RSDFGHI+I PD S+VELP L ETL+ L +TRISGVLI Sbjct: 492 HRVVPGAIVGAIANEGGLRRSDFGHISIRPDHSIVELPADLSNETLEALRRTRISGVLIQ 551 Query: 545 LRPD------RPADKAYKARRND-GGKPRRK 568 L+PD RP+ + + R+D GG+ R+ Sbjct: 552 LQPDFGPPQGRPSGRGDRGGRDDRGGRDDRR 582 >tr|C3JTM9|C3JTM9_RHOER Tax_Id=596309 SubName: Full=Cold-shock DEAD box protein A; EC=3.6.1.-;[Rhodococcus erythropolis SK121] Length = 591 Score = 714 bits (1844), Expect = 0.0 Identities = 375/571 (65%), Positives = 448/571 (78%), Gaps = 16/571 (2%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADL I V++A++DVGYESP+ IQAATIP L+ G DVVGLAQTGTGKTAAFA+P+LS Sbjct: 12 TFADLDIDDRVLKALSDVGYESPSPIQAATIPPLLEGKDVVGLAQTGTGKTAAFAVPVLS 71 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 +IDT+ TQALVLAPTRELALQVAEAF +Y AH+ LNVLP+YGG SY +QL+GLRRGA Sbjct: 72 RIDTSIKQTQALVLAPTRELALQVAEAFGKYSAHIPGLNVLPIYGGQSYGVQLSGLRRGA 131 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGRVIDHLE+ TLDL+ + YLVLDEADEML MGF EDVERIL +TP KQVALF Sbjct: 132 HVVVGTPGRVIDHLEKGTLDLTNLKYLVLDEADEMLKMGFQEDVERILRDTPGDKQVALF 191 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP +IR+I+ +YL++P+E+ ++KT+TA NI+QRYIQVA RK+DALTRVLEVE FE Sbjct: 192 SATMPGSIRRISKQYLNNPVEITVKSKTSTASNITQRYIQVAHQRKLDALTRVLEVEAFE 251 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMI+FVRTKQATE++AEKLRARG SAAAINGDI Q QRERTI L++G +DILVATDVAA Sbjct: 252 AMIIFVRTKQATEDLAEKLRARGHSAAAINGDIVQAQRERTIGQLKNGALDILVATDVAA 311 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHV+NYDIPHDTESYVH LLFV+PRERHLLK IEKATRQ Sbjct: 312 RGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRQGDALLFVAPRERHLLKSIEKATRQ 371 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E +LP+V+DVNAQRVAKF DSIT +L++ + +FR+++EDY++EH+VP+ DIAAALA Sbjct: 372 PLAEMQLPSVDDVNAQRVAKFGDSITESLASENLAMFRKMIEDYDQEHDVPLIDIAAALA 431 Query: 434 LQSRDGEEFLLAPDPPP---------DQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKR 484 LQSRDGE FLL+P+PP + G + YRI+VGKR Sbjct: 432 LQSRDGEAFLLSPEPPAPPRREREPREPRPPRRFDDGPAPRSRGPEGQELAAYRIAVGKR 491 Query: 485 HKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLIN 544 H+V PGAIVGAIANEGGL RSDFGHI+I PD S+VELP L ETL+ L +TRISGVLI Sbjct: 492 HRVVPGAIVGAIANEGGLRRSDFGHISIRPDHSIVELPADLSNETLEALRRTRISGVLIQ 551 Query: 545 LRPD------RPADKAYKARRND-GGKPRRK 568 L+PD RP+ + + R+D GG+ R+ Sbjct: 552 LQPDFGPPQGRPSGRGDRGGRDDRGGRDDRR 582 >tr|Q5YQK7|Q5YQK7_NOCFA Tax_Id=37329 (deaD)SubName: Full=Putative ATP-dependent RNA helicase;[Nocardia farcinica] Length = 602 Score = 711 bits (1834), Expect = 0.0 Identities = 373/570 (65%), Positives = 444/570 (77%), Gaps = 14/570 (2%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 +FADL I ++RAIADVGYESP+ IQAATIP L+ G+DVVGLAQTGTGKTAAFAIPIL Sbjct: 30 SFADLGIDDRILRAIADVGYESPSPIQAATIPPLLDGADVVGLAQTGTGKTAAFAIPILM 89 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 ++ T +ALVLAPTRELA+QVAEAF RY AH+ L+VLP+YGG SY +QL+GLRRGA Sbjct: 90 GLEVTGRQPRALVLAPTRELAIQVAEAFGRYAAHMPGLHVLPIYGGQSYGVQLSGLRRGA 149 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGRVIDHLE+ TLDLS++ YLVLDEADEML MGF EDVERIL++TP KQVALF Sbjct: 150 HVVVGTPGRVIDHLEKGTLDLSQLQYLVLDEADEMLKMGFQEDVERILADTPREKQVALF 209 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP AIRKI+ +YL +P+E+ +AKT T NI+QR++QV+ RK+DALTRVLEVEPFE Sbjct: 210 SATMPAAIRKISKQYLREPVEITVKAKTQTNTNITQRWVQVSHQRKLDALTRVLEVEPFE 269 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMI+FVRTKQ TEE+AEKLRARGFSAAAINGDI Q QRERTI L+ G +DILVATDVAA Sbjct: 270 AMIIFVRTKQGTEELAEKLRARGFSAAAINGDIAQNQRERTIGQLKSGALDILVATDVAA 329 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHV+NYDIPHDTESYVH LLFV+PRERHLLK IE+ATR Sbjct: 330 RGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRSGQALLFVAPRERHLLKAIERATRH 389 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E +LP+VEDVNAQRV+KF D+IT LS+ + LFR+L+EDYEREHN+P+ DIAAALA Sbjct: 390 PLEEMQLPSVEDVNAQRVSKFGDAITENLSSANLPLFRKLIEDYEREHNIPLVDIAAALA 449 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGA--------FSTYRISVGKRH 485 + S DG+ F + +P P++ GG+ +TYRISVGKRH Sbjct: 450 VGSYDGDNFFMEAEPEPERRERVPRERPARRFDEERGGGSHHRATGTELATYRISVGKRH 509 Query: 486 KVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINL 545 +V PGAIVGAIANEGGL RSDFGHI+I PD SLVELP +LP ETL+ L +TRISGVLI L Sbjct: 510 RVVPGAIVGAIANEGGLRRSDFGHISIRPDHSLVELPAQLPAETLEALRRTRISGVLIQL 569 Query: 546 RPDR--PADKAY----KARRNDGGKPRRKR 569 + D+ PA +A+ + R+ G +P R++ Sbjct: 570 QLDQGPPAQRAFSRGPRRDRDAGKRPERRK 599 >tr|C2AS76|C2AS76_TSUPA Tax_Id=521096 SubName: Full=ATP-dependent RNA helicase CsdA; EC=5.99.1.-;[Tsukamurella paurometabola DSM 20162] Length = 602 Score = 699 bits (1805), Expect = 0.0 Identities = 370/571 (64%), Positives = 429/571 (75%), Gaps = 22/571 (3%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TF DL I V+RA+A+VGYE+P+ IQAATIP L+AG+DVVGLAQTGTGKTAAFA+P+LS Sbjct: 29 TFLDLGIDERVLRALAEVGYENPSPIQAATIPPLLAGNDVVGLAQTGTGKTAAFAVPVLS 88 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 KID S QALVLAPTRELALQV+EAF +Y H+ + VLP+YGG SY +QL+GLRRGA Sbjct: 89 KIDGESRTPQALVLAPTRELALQVSEAFGKYAVHMPNITVLPIYGGQSYGVQLSGLRRGA 148 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 Q++VGTPGRVIDHLE+ TLDLS +++LVLDEADEMLTMGF EDVERIL++TPE+KQVALF Sbjct: 149 QIIVGTPGRVIDHLEKGTLDLSNLEFLVLDEADEMLTMGFQEDVERILADTPEFKQVALF 208 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPPAIRKI +YLHDP+E+ +AKTAT NI+QRY+QVA RK+DALTR+LEVE F+ Sbjct: 209 SATMPPAIRKIAKKYLHDPVEISVKAKTATGSNITQRYLQVAHQRKLDALTRLLEVEEFD 268 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 MI+FVRTK ATEE+AEKLRARG +AAAINGDI Q QRERTI L+DG +DILVATDVAA Sbjct: 269 GMIIFVRTKSATEELAEKLRARGHAAAAINGDIVQAQRERTIGQLKDGKVDILVATDVAA 328 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHV+NYDIPHDTESYVH LLFV+PRERHLL+ IEKATRQ Sbjct: 329 RGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRKGDALLFVTPRERHLLRAIEKATRQ 388 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 LTE LP+VEDVNA RV KF +SIT LSN +++FRRL+EDY ++VP+ D+AAALA Sbjct: 389 PLTEIGLPSVEDVNAHRVEKFGESITENLSNDHLQMFRRLIEDYVGANDVPLVDLAAALA 448 Query: 434 LQSRDGEEFLLAPDPPPDQ------------------XXXXXXXXXXXXXXXXXSGGAFS 475 LQSRDG FLL PDPP + +G + Sbjct: 449 LQSRDGSSFLLQPDPPERERNSRDRKDRDFGDRDDRGRGRRDRDRDREPSVHRKTGRPMA 508 Query: 476 TYRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQ 535 YRI+VGKR P AIVGAIANEGGL RSDFGHI+I PD S+VELP LPRE LE+ Sbjct: 509 PYRIAVGKRQHATPSAIVGAIANEGGLRRSDFGHISIRPDHSIVELPDDLPREVFDALER 568 Query: 536 TRISGVLINLRPDRPADKAYKARRNDGGKPR 566 TRISG LINL D A R GGK R Sbjct: 569 TRISGQLINLEVDPGAPTG----RPSGGKQR 595 >tr|D0L9Q4|D0L9Q4_GORB4 Tax_Id=526226 SubName: Full=DEAD/DEAH box helicase domain protein;[Gordonia bronchialis] Length = 597 Score = 693 bits (1788), Expect = 0.0 Identities = 371/563 (65%), Positives = 437/563 (77%), Gaps = 12/563 (2%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TF DL I V A++DVGYE+P+ IQAATIP LMAG DVVGLAQTGTGKTAAFAIPILS Sbjct: 18 TFDDLDIDSRVRAAVSDVGYETPSPIQAATIPPLMAGRDVVGLAQTGTGKTAAFAIPILS 77 Query: 74 KIDTTSTAT-----QALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAG 128 +++ + QALVLAPTRELALQVAEAF RY AH+ + VLP+YGG SY +QLAG Sbjct: 78 RLEGAGDGSGPRKPQALVLAPTRELALQVAEAFGRYSAHMPEVRVLPIYGGQSYGVQLAG 137 Query: 129 LRRGAQVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYK 188 LRRGAQV+VGTPGRVIDHL+R TLD+S + +LVLDEADEMLTMGFAEDVERIL+ETP+ K Sbjct: 138 LRRGAQVIVGTPGRVIDHLDRGTLDISELRFLVLDEADEMLTMGFAEDVERILAETPDDK 197 Query: 189 QVALFSATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLE 248 QVALFSATMP AIR++ RYL+DP E+ ++KTATA+NI+QRY+QV+ RK+DALTR LE Sbjct: 198 QVALFSATMPSAIRRLAQRYLNDPQEITVKSKTATAQNITQRYLQVSHQRKLDALTRFLE 257 Query: 249 VEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVA 308 VE F+AMIVFVRTKQATEE+AEKLR+RGFSA AINGD+ Q QRERTI L+ GGIDILVA Sbjct: 258 VETFDAMIVFVRTKQATEELAEKLRSRGFSAVAINGDMAQAQRERTINQLKSGGIDILVA 317 Query: 309 TDVAARGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIE 368 TDVAARGLDV+RISHV+NYDIPHDTESYVH LLFVSPRERHLL+ IE Sbjct: 318 TDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRAGNALLFVSPRERHLLRSIE 377 Query: 369 KATRQTLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADI 428 +ATR TLTE LP+VEDVNAQRVA+FADSIT LS+ +++FR+L+E+Y R+++V MADI Sbjct: 378 RATRSTLTEIGLPSVEDVNAQRVARFADSITENLSSDNLDMFRQLIENYARDNDVAMADI 437 Query: 429 AAALALQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVG 488 AAALAL++RDG FL+APDPP +GG+F+TYRI+VG++HKV Sbjct: 438 AAALALETRDG-GFLMAPDPPEGD------RPPRRERAPRRAGGSFATYRIAVGRKHKVS 490 Query: 489 PGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPD 548 PGAIVGAIANEGGL R DFG+I+I DFSLVELP L ETL L TRI I++R D Sbjct: 491 PGAIVGAIANEGGLTRGDFGNISIRDDFSLVELPDDLDNETLSALRDTRIGRNPIDIRRD 550 Query: 549 RPADKAYKARRNDGGKPRRKRLG 571 A +A + G R R G Sbjct: 551 LGAPRARGGAKRGGQGHRGGRDG 573 >tr|C4LJP9|C4LJP9_CORK4 Tax_Id=645127 SubName: Full=ATP-dependent RNA helicase;[Corynebacterium kroppenstedtii] Length = 823 Score = 622 bits (1603), Expect = e-176 Identities = 332/573 (57%), Positives = 410/573 (71%), Gaps = 22/573 (3%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 +F DL + V+RA+ VG+E+P+ IQAATIP L G DVVGLAQTGTGKTAAFA+PILS Sbjct: 155 SFDDLDLSDDVVRAVKKVGFETPSPIQAATIPILAQGRDVVGLAQTGTGKTAAFALPILS 214 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 ++D + QALVL+PTRELALQVA+AF + HL ++VLP+YGG SY IQL+GLRRGA Sbjct: 215 RLDRSQKKPQALVLSPTRELALQVADAFQEFADHLGGVHVLPIYGGQSYGIQLSGLRRGA 274 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 +VVGTPGRVIDHLER +LDLS + YLVLDEADEML MGF EDVERIL++TPE+KQ ALF Sbjct: 275 HIVVGTPGRVIDHLERGSLDLSELKYLVLDEADEMLNMGFQEDVERILADTPEHKQTALF 334 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP +IR+++ +YL DP EV +++ TA+NI Q+Y+ V K+DALTR+LEV F+ Sbjct: 335 SATMPASIRRLSKQYLEDPREVTIKSQQRTADNIHQQYLLVNHHYKLDALTRILEVTEFD 394 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMI+F RTKQ TEE+AEKLRARGFSAAAINGD+ Q QRERT+ LRDG +DILVATDVAA Sbjct: 395 AMIMFARTKQNTEELAEKLRARGFSAAAINGDMAQNQRERTVDQLRDGRLDILVATDVAA 454 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHV+NYDIPHDTESYVH +LFV+PRER LL+ IE+AT+ Sbjct: 455 RGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAILFVTPRERRLLRSIERATKS 514 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 ++ E +LPTV++VN R AKFA SIT +L++ ++LFR L+ Y EH P+ADIAAALA Sbjct: 515 SIEEMQLPTVDEVNETRKAKFAQSITESLADPQVDLFRGLINSYAEEHETPLADIAAALA 574 Query: 434 LQSRDGEEFLLAPD------------------PPPDQXXXXXXXXXXXXXXXXXSGGAFS 475 QS+ G+EFLL D P + +G + Sbjct: 575 TQSQSGDEFLLKEDTIRRNDRRNDRRGRRNDREPDTRSLNERFSGKEPPRFTDRTGKEMA 634 Query: 476 TYRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQ 535 Y+I+VGKR +V PGAIVGAIANEGGL+ DFG I+I + SLVELP LP E + LE Sbjct: 635 VYKIAVGKRQQVRPGAIVGAIANEGGLNSRDFGKISIFSEHSLVELPADLPMEVFEALED 694 Query: 536 TRISGVLINLRPD--RPADK--AYKARRNDGGK 564 TR+SG LI + PD PA + A+K R G + Sbjct: 695 TRVSGQLIKIEPDPGAPAGRPGAHKRDRQSGDR 727 >tr|A1SQL1|A1SQL1_NOCSJ Tax_Id=196162 SubName: Full=DEAD/DEAH box helicase domain protein;[Nocardioides sp.] Length = 589 Score = 622 bits (1603), Expect = e-176 Identities = 345/580 (59%), Positives = 406/580 (70%), Gaps = 32/580 (5%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADL + V++A+ADVGYE P+ IQAATIP L+AG DVVGLAQTGTGKTAAFA+PILS Sbjct: 15 TFADLGLSDQVLKALADVGYEKPSAIQAATIPPLLAGRDVVGLAQTGTGKTAAFALPILS 74 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 ++D T T QALVLAPTRELALQV EAF RY AH+ ++VLPVYGG Y +QL+ LRRG Sbjct: 75 RLDLTQTTPQALVLAPTRELALQVCEAFERYAAHVKGVHVLPVYGGQGYGVQLSALRRGV 134 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGR++DHLE+ TLDLS + +LVLDEADEML MGFAEDVE IL++TP+ K VALF Sbjct: 135 HVVVGTPGRIMDHLEKGTLDLSELRFLVLDEADEMLNMGFAEDVETILADTPDDKNVALF 194 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP IR+I+ +YL DP E+ + KTATA NI+QRY+ V+ P+K+DALTR+LEVE FE Sbjct: 195 SATMPAQIRRISKKYLDDPAEITVKGKTATASNITQRYLTVSYPQKVDALTRILEVENFE 254 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 MIVFVRTK TE +AEKLRARG SA AINGD+ Q QRERT+ L+ G +DILVATDVAA Sbjct: 255 GMIVFVRTKNETETLAEKLRARGLSAMAINGDVAQAQRERTVNQLKSGKLDILVATDVAA 314 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHV+NYDIP DTESYVH + FV+PRER+LLK IEKATRQ Sbjct: 315 RGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAISFVTPRERYLLKHIEKATRQ 374 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNT-GIELFRRLVEDYEREHNVPMADIAAAL 432 LT+ +LPTVEDVN+ R+++F D+IT ALS T I+ FR +V Y REH+VP AD+AAAL Sbjct: 375 PLTQMQLPTVEDVNSTRLSRFDDAITEALSQTQRIDAFRDIVAHYVREHDVPEADVAAAL 434 Query: 433 ALQSRDGEEFLLAP--------DPPPDQXXXXXXXXXXXXXXXXXSGG------------ 472 A+ ++ LL P P ++ GG Sbjct: 435 AVVAQGETPLLLDPADRANELRAPREERAGQGTRRDRHDHGGPGGHGGPPRERRPRGRSD 494 Query: 473 -AFSTYRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLK 531 +TYRI+VGKRHKV P IVGAIANEGGL R DFGHI I D SLVELP LP Sbjct: 495 VPMATYRIAVGKRHKVEPRQIVGAIANEGGLSRQDFGHIDIRGDHSLVELPADLPAGAWD 554 Query: 532 KLEQTRISGVLINLRPD---RPADKAYKARRNDGGKPRRK 568 L TRISG LI L D AD +K KPR K Sbjct: 555 SLRSTRISGKLIELTRDGGGPAADTRHK-------KPRHK 587 >tr|A4FMF6|A4FMF6_SACEN Tax_Id=405948 (deaD)SubName: Full=ATP-dependent RNA helicase;[Saccharopolyspora erythraea] Length = 578 Score = 618 bits (1593), Expect = e-175 Identities = 328/561 (58%), Positives = 407/561 (72%), Gaps = 9/561 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 +F +L + P V++ ++++GYE+P+ IQA TIP L+ G DV+GLAQTGTGKTAAFA+PILS Sbjct: 3 SFDELDLDPRVLQVLSEIGYETPSPIQAQTIPPLLEGHDVMGLAQTGTGKTAAFALPILS 62 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 ++D + QALVLAPTRELA+QVAEAF RY AHL +VLP+YGG SY QLAGL+RGA Sbjct: 63 RLDLDAKTPQALVLAPTRELAIQVAEAFQRYAAHLPGFHVLPIYGGQSYGPQLAGLKRGA 122 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGRVIDHL + +LDL+ + LVLDEADEML MGF EDVE IL PE +QVALF Sbjct: 123 HVVVGTPGRVIDHLNKGSLDLTGLKNLVLDEADEMLRMGFIEDVETILQSVPEQRQVALF 182 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMPP IRKI+ YL++P+E+ + KT TA NI+QRYI V GP K+DALTR+LEVE F+ Sbjct: 183 SATMPPQIRKISQSYLNEPVEISVKTKTTTATNITQRYIPVRGPAKLDALTRILEVETFD 242 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTKQ TEE+AEKL+ARGFSAAAINGDIPQ RERTI LR+G +DILVATDVAA Sbjct: 243 AMIVFVRTKQLTEELAEKLQARGFSAAAINGDIPQAARERTIGHLREGRVDILVATDVAA 302 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHVLNYDIPHD+ESYVH +LFVSPRERH+L+ IEKATRQ Sbjct: 303 RGLDVERISHVLNYDIPHDSESYVHRIGRTGRAGRSGEAILFVSPRERHMLRSIEKATRQ 362 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 ++ + ELP++E VN QR+AKFA IT L+ +ELF+ LVE+YER H+VP A+IAAALA Sbjct: 363 SIGQMELPSIEAVNDQRLAKFAQGITDTLAKGDLELFKGLVEEYERTHDVPAAEIAAALA 422 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPGAIV 493 + + L+ +P P+ + TYR+ VG+R++V P A+V Sbjct: 423 SMVQGDQPLLMEREPEPE---PNRRGRDGGAAKFQPTSSDTETYRVEVGRRNRVTPSALV 479 Query: 494 GAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRPADK 553 GA+ANEGGL GHI I +L+ELP LP + L+KL +T+++G + + AD Sbjct: 480 GALANEGGLPSKHIGHIDIRDGHTLIELPADLPDDMLRKLRKTQVAGRGLRI---SLADG 536 Query: 554 AYKARRNDG---GKPRRKRLG 571 + ARR G KPR R G Sbjct: 537 EFVARRPHGPGRDKPRPHRKG 557 >tr|C8NVE0|C8NVE0_9CORY Tax_Id=585529 (deaD2)SubName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.1.-; Flags: Fragment;[Corynebacterium genitalium ATCC 33030] Length = 639 Score = 614 bits (1584), Expect = e-174 Identities = 338/572 (59%), Positives = 406/572 (70%), Gaps = 26/572 (4%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 F L + V+ AI VG+ESP+ IQA TIP LM G DVVGLAQTGTGKTAAFA+PIL++ Sbjct: 72 FNGLGLPAPVLDAIKRVGFESPSQIQAETIPLLMEGRDVVGLAQTGTGKTAAFALPILAR 131 Query: 75 IDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGAQ 134 IDT++ QAL+LAPTRELALQV+++F + HL ++VLP+YGG +Y IQL+GLRRGAQ Sbjct: 132 IDTSARYPQALILAPTRELALQVSDSFQSFADHLGGISVLPIYGGQAYGIQLSGLRRGAQ 191 Query: 135 VVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALFS 194 ++VGTPGRVIDHLE+ +LD+S + +LVLDEADEML MGF EDVERIL +TPE KQVALFS Sbjct: 192 IIVGTPGRVIDHLEKGSLDISNLRFLVLDEADEMLNMGFQEDVERILEDTPEDKQVALFS 251 Query: 195 ATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFEA 254 ATMP AIR+I+ YL+DP EV +AKT T NI+QRY+ A K+DA+TRVLEV F+A Sbjct: 252 ATMPNAIRRISHDYLNDPEEVTVKAKTRTNTNITQRYLFTAHRNKLDAITRVLEVTEFDA 311 Query: 255 MIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAAR 314 MIVFVRTKQ TEE+AEKLRARGFSAAAINGDI Q QRERT+ LRDG +DILVATDVAAR Sbjct: 312 MIVFVRTKQETEEIAEKLRARGFSAAAINGDIAQQQRERTVDMLRDGRLDILVATDVAAR 371 Query: 315 GLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQT 374 GLDVERISHVLNYDIP+DTESYVH LLFV+PRER +L+ IEK T Sbjct: 372 GLDVERISHVLNYDIPNDTESYVHRIGRTGRAGRTGEALLFVTPRERRMLRSIEKVTGAK 431 Query: 375 LTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALAL 434 + E +LPTV++VN R+ KFADSIT +L N +ELFR LV Y +H+VPM DIAAALA Sbjct: 432 IEEMDLPTVDEVNVSRMNKFADSITESLENDQMELFRGLVRSYSVDHDVPMEDIAAALAA 491 Query: 435 QSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGG---------------------- 472 Q + G+EFL+ +PP D+ G Sbjct: 492 Q-QQGDEFLM-KEPPKDKRDRRERERFDREDRRDRDRGDRGRGRDRGNRGGKGRFHNDDV 549 Query: 473 AFSTYRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKK 532 F TYR+ VGKR V PGAIVGA+ANEGGL DFG ITIG DF+LVELP + + L + Sbjct: 550 NFDTYRLDVGKRQNVRPGAIVGALANEGGLTNRDFGRITIGGDFTLVELPKNMDKSVLDR 609 Query: 533 LEQTRISGVLINLRPDRPADKAYKARRNDGGK 564 L TRISG LIN++ D A + R + GG+ Sbjct: 610 LSDTRISGQLINIQRDTGAPP--RDRGDRGGR 639 >tr|Q8FQ74|Q8FQ74_COREF Tax_Id=152794 SubName: Full=Putative cold shock DEAD-box protein A;[Corynebacterium efficiens] Length = 736 Score = 611 bits (1575), Expect = e-173 Identities = 328/571 (57%), Positives = 402/571 (70%), Gaps = 14/571 (2%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 F L + V+ A+ VG+E+P+ IQA TIP LM G DVVGLAQTGTGKTAAFA+P+LS+ Sbjct: 107 FDALGLPQQVLDAVRKVGFETPSPIQAQTIPVLMDGHDVVGLAQTGTGKTAAFALPVLSR 166 Query: 75 IDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGAQ 134 ID + + QALVLAPTRELALQVA++F + HL LNVLP+YGG +Y IQL+GLRRGA Sbjct: 167 IDKSVRSPQALVLAPTRELALQVADSFQSFADHLGGLNVLPIYGGQAYGIQLSGLRRGAH 226 Query: 135 VVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALFS 194 +VVGTPGR+IDHLE+ +LD+S + +LVLDEADEML MGF EDVERIL++TP+ KQVALFS Sbjct: 227 IVVGTPGRIIDHLEKGSLDISGLRFLVLDEADEMLNMGFQEDVERILADTPDDKQVALFS 286 Query: 195 ATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFEA 254 ATMP IR+++ +YL++P E+ +++T TA NI+QR++ VA KMDALTR+LEV FEA Sbjct: 287 ATMPNGIRRLSKQYLNNPQEISVKSETRTATNITQRFLSVAHRNKMDALTRILEVTEFEA 346 Query: 255 MIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAAR 314 MI+FVRTK TEEVAEKLRARGFSAAAINGDI Q QRERT+ L+DG +DILVATDVAAR Sbjct: 347 MIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAAR 406 Query: 315 GLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQT 374 GLDVERISHVLNYDIP+DTESYVH +LFV+PRER +L+ IE+AT Sbjct: 407 GLDVERISHVLNYDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERATNAP 466 Query: 375 LTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALAL 434 L E ELPTV++VN R KFADSIT AL N + LFR L+++Y +++VP+ D+AAALA Sbjct: 467 LVEMELPTVDEVNEYRKVKFADSITEALENPQVALFRTLIKEYAEKNDVPLEDVAAALAT 526 Query: 435 QSRDGEEFLLAP--------------DPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRIS 480 Q++ G +F L D D +TYRI+ Sbjct: 527 QAQAGNDFFLTEQAADRDRGRGDRRRDRDFDDRGGRGRDRGDRPSRFDRDDANLATYRIA 586 Query: 481 VGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISG 540 VGKR V PGAIVGA+ANEGGL+ DFG ITI D +LVELP LP+ L L TRISG Sbjct: 587 VGKRQHVRPGAIVGALANEGGLNSKDFGRITIAADHTLVELPKDLPQSVLDNLRDTRISG 646 Query: 541 VLINLRPDRPADKAYKARRNDGGKPRRKRLG 571 LIN+ D + R+D G R R G Sbjct: 647 QLINIERDSGGRPPRRFERDDRGGDRGGRGG 677 >tr|C8NKV2|C8NKV2_COREF Tax_Id=196164 (deaD)SubName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.1.-;[Corynebacterium efficiens YS-314] Length = 736 Score = 611 bits (1575), Expect = e-173 Identities = 328/571 (57%), Positives = 402/571 (70%), Gaps = 14/571 (2%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 F L + V+ A+ VG+E+P+ IQA TIP LM G DVVGLAQTGTGKTAAFA+P+LS+ Sbjct: 107 FDALGLPQQVLDAVRKVGFETPSPIQAQTIPVLMDGHDVVGLAQTGTGKTAAFALPVLSR 166 Query: 75 IDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGAQ 134 ID + + QALVLAPTRELALQVA++F + HL LNVLP+YGG +Y IQL+GLRRGA Sbjct: 167 IDKSVRSPQALVLAPTRELALQVADSFQSFADHLGGLNVLPIYGGQAYGIQLSGLRRGAH 226 Query: 135 VVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALFS 194 +VVGTPGR+IDHLE+ +LD+S + +LVLDEADEML MGF EDVERIL++TP+ KQVALFS Sbjct: 227 IVVGTPGRIIDHLEKGSLDISGLRFLVLDEADEMLNMGFQEDVERILADTPDDKQVALFS 286 Query: 195 ATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFEA 254 ATMP IR+++ +YL++P E+ +++T TA NI+QR++ VA KMDALTR+LEV FEA Sbjct: 287 ATMPNGIRRLSKQYLNNPQEISVKSETRTATNITQRFLSVAHRNKMDALTRILEVTEFEA 346 Query: 255 MIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAAR 314 MI+FVRTK TEEVAEKLRARGFSAAAINGDI Q QRERT+ L+DG +DILVATDVAAR Sbjct: 347 MIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAAR 406 Query: 315 GLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQT 374 GLDVERISHVLNYDIP+DTESYVH +LFV+PRER +L+ IE+AT Sbjct: 407 GLDVERISHVLNYDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERATNAP 466 Query: 375 LTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALAL 434 L E ELPTV++VN R KFADSIT AL N + LFR L+++Y +++VP+ D+AAALA Sbjct: 467 LVEMELPTVDEVNEYRKVKFADSITEALENPQVALFRTLIKEYAEKNDVPLEDVAAALAT 526 Query: 435 QSRDGEEFLLAP--------------DPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRIS 480 Q++ G +F L D D +TYRI+ Sbjct: 527 QAQAGNDFFLTEQAADRDRGRGDRRRDRDFDDRGGRGRDRGDRPSRFDRDDANLATYRIA 586 Query: 481 VGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISG 540 VGKR V PGAIVGA+ANEGGL+ DFG ITI D +LVELP LP+ L L TRISG Sbjct: 587 VGKRQHVRPGAIVGALANEGGLNSKDFGRITIAADHTLVELPKDLPQSVLDNLRDTRISG 646 Query: 541 VLINLRPDRPADKAYKARRNDGGKPRRKRLG 571 LIN+ D + R+D G R R G Sbjct: 647 QLINIERDSGGRPPRRFERDDRGGDRGGRGG 677 >tr|C2GIZ2|C2GIZ2_9CORY Tax_Id=548478 SubName: Full=Superfamily II helicase;[Corynebacterium glucuronolyticum ATCC 51866] Length = 718 Score = 610 bits (1574), Expect = e-172 Identities = 329/564 (58%), Positives = 403/564 (71%), Gaps = 10/564 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 +F L + ++ A+ VG+E+P+ IQA TIPAL+ G DVVGLAQTGTGKTAAFA+PI++ Sbjct: 111 SFDKLGLPSDILEAVKKVGFETPSPIQARTIPALLDGRDVVGLAQTGTGKTAAFALPIIA 170 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 +ID ++ + QALVLAPTRELALQVA+AF + H+ +NVLP+YGG +Y IQL+GLRRGA Sbjct: 171 RIDKSNRSPQALVLAPTRELALQVADAFQEFADHVGGINVLPIYGGQAYGIQLSGLRRGA 230 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 ++VGTPGRVIDHL++ +LD+S +DYLVLDEADEML MGF EDVERIL +TP+ KQVALF Sbjct: 231 HIIVGTPGRVIDHLKKGSLDISHLDYLVLDEADEMLNMGFQEDVERILEDTPDKKQVALF 290 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP AIR+++ +YL DP EV +A+T T NISQRY+ VA K+DALTR+LEV FE Sbjct: 291 SATMPNAIRRLSQQYLDDPYEVTVKAETRTNTNISQRYLNVAHRNKLDALTRILEVTEFE 350 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMI+FVRTK TEE+AEKLRARGFSA AINGDI Q QRERT+ LRDG +DILVATDVAA Sbjct: 351 AMIIFVRTKYETEELAEKLRARGFSAQAINGDIAQQQRERTVDQLRDGRLDILVATDVAA 410 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHVLNYDIPHDTESY+H +LFV+PRER +L+ IE+ T Sbjct: 411 RGLDVDRISHVLNYDIPHDTESYIHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNA 470 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TL E +LPTV++VN R KFADSIT AL ++ + LFR LV+ Y H+VP+ DIAAALA Sbjct: 471 TLEEMQLPTVDEVNESRKEKFADSITEALEDSQLGLFRSLVKQYSDAHDVPLEDIAAALA 530 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGA-----FSTYRISVGKRHKVG 488 Q++ EEFL+ +PP D+ +G A F YR+ VG+R V Sbjct: 531 AQAQSNEEFLM-KEPPKDKRRERRDRDRDGGRRQRDNGPARPDSDFEIYRLQVGRRDHVR 589 Query: 489 PGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPD 548 PGAIVGAIANEGGL DFG I I FSLVELP L + L +L T I G I +R D Sbjct: 590 PGAIVGAIANEGGLSNRDFGRIDIQQSFSLVELPKGLGDDVLDRLADTEIGGRNIEIRRD 649 Query: 549 RPADKAYKARRN-DGGKPRRKRLG 571 Y +R N GG+ R G Sbjct: 650 ---PDGYISRGNRSGGRGNRGGYG 670 >tr|C0VTD2|C0VTD2_9CORY Tax_Id=548477 SubName: Full=Superfamily II helicase;[Corynebacterium glucuronolyticum ATCC 51867] Length = 718 Score = 610 bits (1574), Expect = e-172 Identities = 329/564 (58%), Positives = 403/564 (71%), Gaps = 10/564 (1%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 +F L + ++ A+ VG+E+P+ IQA TIPAL+ G DVVGLAQTGTGKTAAFA+PI++ Sbjct: 111 SFDKLGLPSDILEAVKKVGFETPSPIQARTIPALLDGRDVVGLAQTGTGKTAAFALPIIA 170 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 +ID ++ + QALVLAPTRELALQVA+AF + H+ +NVLP+YGG +Y IQL+GLRRGA Sbjct: 171 RIDKSNRSPQALVLAPTRELALQVADAFQEFADHVGGINVLPIYGGQAYGIQLSGLRRGA 230 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 ++VGTPGRVIDHL++ +LD+S +DYLVLDEADEML MGF EDVERIL +TP+ KQVALF Sbjct: 231 HIIVGTPGRVIDHLKKGSLDISHLDYLVLDEADEMLNMGFQEDVERILEDTPDKKQVALF 290 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP AIR+++ +YL DP EV +A+T T NISQRY+ VA K+DALTR+LEV FE Sbjct: 291 SATMPNAIRRLSQQYLDDPYEVTVKAETRTNTNISQRYLNVAHRNKLDALTRILEVTEFE 350 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMI+FVRTK TEE+AEKLRARGFSA AINGDI Q QRERT+ LRDG +DILVATDVAA Sbjct: 351 AMIIFVRTKYETEELAEKLRARGFSAQAINGDIAQQQRERTVDQLRDGRLDILVATDVAA 410 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHVLNYDIPHDTESY+H +LFV+PRER +L+ IE+ T Sbjct: 411 RGLDVDRISHVLNYDIPHDTESYIHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNA 470 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TL E +LPTV++VN R KFADSIT AL ++ + LFR LV+ Y H+VP+ DIAAALA Sbjct: 471 TLEEMQLPTVDEVNESRKEKFADSITEALEDSQLGLFRSLVKQYSDAHDVPLEDIAAALA 530 Query: 434 LQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGA-----FSTYRISVGKRHKVG 488 Q++ EEFL+ +PP D+ +G A F YR+ VG+R V Sbjct: 531 AQAQSNEEFLM-KEPPKDKRRERRDRDRDGGRRQRDNGPARPDSDFEIYRLQVGRRDHVR 589 Query: 489 PGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPD 548 PGAIVGAIANEGGL DFG I I FSLVELP L + L +L T I G I +R D Sbjct: 590 PGAIVGAIANEGGLSNRDFGRIDIQQSFSLVELPKGLGDDVLDRLADTEIGGRNIEIRRD 649 Query: 549 RPADKAYKARRN-DGGKPRRKRLG 571 Y +R N GG+ R G Sbjct: 650 ---PDGYISRGNRSGGRGNRGGYG 670 >tr|A3TS87|A3TS87_9MICO Tax_Id=313589 SubName: Full=ATP-dependent RNA helicase;[Janibacter sp. HTCC2649] Length = 601 Score = 604 bits (1558), Expect = e-171 Identities = 331/573 (57%), Positives = 400/573 (69%), Gaps = 30/573 (5%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TF+DL + V+RA+ DVGYE+P+ IQAATIPAL+AG VVGLAQTGTGKTAAFA+PILS Sbjct: 22 TFSDLGLDERVLRALKDVGYETPSPIQAATIPALLAGRHVVGLAQTGTGKTAAFALPILS 81 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 ++D QALVLAPTRELALQV EAF +Y + + ++VLPVYGG +Y +QL+ LRRG Sbjct: 82 RLDLKQKTPQALVLAPTRELALQVCEAFEKYASRMPGVHVLPVYGGQAYGVQLSALRRGV 141 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 +VVGTPGR++DHLE+ TLDLS + +LVLDEADEML MGFAEDVE IL++TP K VALF Sbjct: 142 HIVVGTPGRIMDHLEKGTLDLSELRFLVLDEADEMLKMGFAEDVETILADTPAEKHVALF 201 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP IR+I+ +YL D LE+ E T TA NI+QRY+ + P+K+DALTR+LEVE FE Sbjct: 202 SATMPSQIRRISKKYLTDALEITVERTTETAPNITQRYLFCSYPQKIDALTRILEVENFE 261 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 MIVFVRTK TE +AEKLRARGFSA AINGDI Q QRERT+ L+ G +DILVATDVAA Sbjct: 262 GMIVFVRTKNETEMLAEKLRARGFSATAINGDIAQNQRERTVAQLKSGKLDILVATDVAA 321 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDVERISHV+NYDIP DTESYVH + FV+PRE++LLK IEKAT+ Sbjct: 322 RGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAISFVTPREKYLLKAIEKATKT 381 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 TLTE +LP+VED+NA R+ +F D IT AL+++ I+ FR ++ Y R H+VP AD+AAALA Sbjct: 382 TLTEMQLPSVEDINATRLGRFDDRITTALASSDIDAFRDVIAHYVRNHDVPEADVAAALA 441 Query: 434 LQSRDGEEFLLAPDP--PP----DQXXXXXXXXXXXXXXXXXSGGA-------------- 473 + + E LL PDP PP D GG+ Sbjct: 442 IVLQGDEPMLLGPDPVRPPRRERDSGAQGGRDFSDRGPRRDDRGGSRFDKGGSGERPARR 501 Query: 474 -----FSTYRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRE 528 +TY+I+VG+RHKV P IVGA+ANEGGL R DFGHI I D SLVELP LP Sbjct: 502 GSNVPMATYKIAVGRRHKVEPRQIVGALANEGGLGRQDFGHIDIRADHSLVELPATLPAG 561 Query: 529 TLKKLEQTRISGVLINL-----RPDRPADKAYK 556 T L TRISG LI L R RP K ++ Sbjct: 562 TWDLLRTTRISGQLIELTESSERGGRPDKKPHR 594 >tr|Q6NHW2|Q6NHW2_CORDI Tax_Id=1717 (deaD)SubName: Full=DEAD-box helicase;[Corynebacterium diphtheriae] Length = 680 Score = 603 bits (1554), Expect = e-170 Identities = 321/564 (56%), Positives = 397/564 (70%), Gaps = 19/564 (3%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 F L + ++++A+A VG+E+P+ IQA TIP LM G DV+GLAQTGTGKTAAFA+PILS+ Sbjct: 69 FEALGLPDAILKAVAKVGFETPSPIQAQTIPVLMQGHDVMGLAQTGTGKTAAFALPILSR 128 Query: 75 IDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGAQ 134 ID QAL+LAPTRELALQVA++F + HL ++VLP+YGG +Y IQL+GLRRGAQ Sbjct: 129 IDVKKRHPQALILAPTRELALQVADSFQSFADHLGDIHVLPIYGGQAYGIQLSGLRRGAQ 188 Query: 135 VVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALFS 194 ++VGTPGRVIDHLE+ +LD+S + +LVLDEADEML MGF EDVERIL +TPE KQVALFS Sbjct: 189 IIVGTPGRVIDHLEKGSLDISNLRFLVLDEADEMLNMGFQEDVERILEDTPEDKQVALFS 248 Query: 195 ATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFEA 254 ATMP IR+++ Y+ DP E++ +++T T NI+QRY+ VA K+DALTR+LEV FEA Sbjct: 249 ATMPNGIRRLSRDYMKDPHEIQVKSQTRTNTNITQRYLNVAHRNKLDALTRILEVTEFEA 308 Query: 255 MIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAAR 314 MI+FVRTK TEEVAEKLRARGFSAAAINGDI Q QRERT+ L+DG +DILVATDVAAR Sbjct: 309 MIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAAR 368 Query: 315 GLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQT 374 GLDVERI+HV NYDIP+DTESYVH +LFV+PRER +L+ IE+AT Sbjct: 369 GLDVERITHVFNYDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERATNAK 428 Query: 375 LTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALAL 434 L E +LPTV++VN R AKFADSIT +L + + +FR L++ Y EH+VP+ DIAAALA Sbjct: 429 LIEMDLPTVDEVNESRKAKFADSITESLEDDQVAIFRSLIKSYAEEHDVPLEDIAAALAT 488 Query: 435 QSRDGEEFLLAPDPP---------PDQXXXXXXXXXXXXXXXXXSGGAF------STYRI 479 Q+R G EFL+ PP D+ G F YR+ Sbjct: 489 QARAGSEFLMKEPPPEKRRERRDRDDRRGGRDRFDRDDRRGGRDRGSRFERNDDMQLYRL 548 Query: 480 SVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRIS 539 +VGKR V PGAIVGA+ANEGGL DFG I I D +LVELP + + +L TRIS Sbjct: 549 AVGKRQHVRPGAIVGALANEGGLSNKDFGRINIFVDHTLVELPKNMDPSVIDRLSDTRIS 608 Query: 540 GVLINLRPDRPADKAYKARRNDGG 563 G LI++ D RRND G Sbjct: 609 GQLIHIE----KDNGRPPRRNDDG 628 >tr|Q6AEM1|Q6AEM1_LEIXX Tax_Id=59736 (deaD)SubName: Full=ATP-dependent RNA helicase;[Leifsonia xyli subsp. xyli] Length = 589 Score = 602 bits (1553), Expect = e-170 Identities = 326/570 (57%), Positives = 400/570 (70%), Gaps = 14/570 (2%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TFADL + +V+ + DVGYE+P+ IQAATIP L+ G DVVGLAQTGTGKTAAFA+PILS Sbjct: 18 TFADLGLDRAVLAVLKDVGYETPSAIQAATIPLLLEGRDVVGLAQTGTGKTAAFALPILS 77 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 ++D + + QALVLAPTRELALQVAEAF Y HL +++LPVYGG Y +QL+ LRRG Sbjct: 78 RLDLSQKSPQALVLAPTRELALQVAEAFESYATHLKGVHLLPVYGGQGYGVQLSALRRGV 137 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 +VVGTPGR++DHL++ TLDLS + +LVLDEADEML MGFAEDVE+IL++TP+ KQVALF Sbjct: 138 HIVVGTPGRIMDHLDKGTLDLSGLKHLVLDEADEMLKMGFAEDVEKILADTPDDKQVALF 197 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP IR+I+ +YLHDP EV +A+T T+ N +QRY+ V+ +K+DALTR+LEVE FE Sbjct: 198 SATMPAQIRRISKKYLHDPEEVTVKARTTTSANTTQRYLVVSYSQKVDALTRILEVENFE 257 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMIVFVRTK TE +AE+LRARG+SAAAI+GD+ Q QRERT+ L+ G +DILVATDVAA Sbjct: 258 AMIVFVRTKNETETLAERLRARGYSAAAISGDVAQAQRERTVGQLKSGKLDILVATDVAA 317 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHV+N+DIP DTESYVH + FV+ RER LL IEKATRQ Sbjct: 318 RGLDVDRISHVVNFDIPVDTESYVHRIGRTGRAGRSGAAISFVTTRERRLLTAIEKATRQ 377 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTG-IELFRRLVEDYEREHNVPMADIAAAL 432 LT LP+V+DVN R+A+F D+IT AL+ I FR ++ Y H+VP AD+AAAL Sbjct: 378 PLTPMPLPSVDDVNVTRLARFDDAITSALAQQDRISRFRDIIAHYVAHHDVPEADVAAAL 437 Query: 433 ALQSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGG-------------AFSTYRI 479 A+ ++ E LL+ D Q G + YRI Sbjct: 438 AVVAQGEEPLLLSADDALTQRIERDARDDRLARAGRDDRGRGERPVRRDRGYRPMAPYRI 497 Query: 480 SVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRIS 539 VGKR +V P IVGA+ANEGGL R DFGHI I PDFS+VELP LP +TL +L TRIS Sbjct: 498 EVGKRQRVEPRQIVGALANEGGLSRDDFGHIRIMPDFSIVELPADLPGDTLARLTGTRIS 557 Query: 540 GVLINLRPDRPADKAYKARRNDGGKPRRKR 569 G LI LRPDR A K PR+ R Sbjct: 558 GKLIELRPDRGAGARRKPDERGERPPRKPR 587 >tr|B8HD71|B8HD71_ARTCA Tax_Id=452863 SubName: Full=DEAD/DEAH box helicase domain protein;[Arthrobacter chlorophenolicus] Length = 694 Score = 602 bits (1552), Expect = e-170 Identities = 324/561 (57%), Positives = 403/561 (71%), Gaps = 13/561 (2%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 FADL I V+ A+ DVGYE P+ IQAATIP L+ G DVVGLAQTGTGKTAAFA+P LS+ Sbjct: 52 FADLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPALSR 111 Query: 75 I------DTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAG 128 + + S TQALVLAPTRELALQVAEAF+ Y H+ VLPVYGGS+Y QLAG Sbjct: 112 LAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTVLPVYGGSAYGPQLAG 171 Query: 129 LRRGAQVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYK 188 LRRGAQVVVGTPGRVIDH+ + +LDLS + YLVLDEADEML MGFAEDVE+I +TPE + Sbjct: 172 LRRGAQVVVGTPGRVIDHISKGSLDLSELQYLVLDEADEMLRMGFAEDVEQIFQQTPEDR 231 Query: 189 QVALFSATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLE 248 QVALFSATMP IR+++ +YL+DP E+ + KT+T NI QRY+Q+ GP+K+DA+TR+LE Sbjct: 232 QVALFSATMPGQIRRMSKQYLNDPAEISVKTKTSTGTNIRQRYLQIMGPQKLDAMTRILE 291 Query: 249 VEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVA 308 VE F+ +I FVRTK ATE++A+KL++RGF AAAINGDIPQ QRERT+ AL++G IDILVA Sbjct: 292 VEEFDGVIAFVRTKMATEDLADKLKSRGFQAAAINGDIPQQQRERTVDALKEGRIDILVA 351 Query: 309 TDVAARGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIE 368 TDVAARGLDVERISHV+NYDIPHDTESYVH +LF++PRE++LL+ IE Sbjct: 352 TDVAARGLDVERISHVINYDIPHDTESYVHRIGRTGRAGRNGDAILFMTPREKYLLRAIE 411 Query: 369 KATRQTLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADI 428 KATRQ++ + LPT E VN R+ KFA+ IT L++ + +FR L+ YE EH VP A+I Sbjct: 412 KATRQSVEQMHLPTAETVNTLRLGKFAERITETLASEDVSMFRDLIASYEEEHKVPAAEI 471 Query: 429 AAALALQSRDGEEFL---LAPDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRH 485 AAALA+ ++ G+ L LA P + + G +TYRI+VG+R Sbjct: 472 AAALAVMAQGGQPLLVKELAAAPDFQKRERSKDGFGSRGPSRQLTEGN-ATYRIAVGRRQ 530 Query: 486 KVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINL 545 +V PG+IVGAIANEGG+ + G I I D SLVELP L E L+ L +TRI G LI+L Sbjct: 531 RVMPGSIVGAIANEGGISSAQIGGIDIRSDHSLVELPADLSPEQLRALSRTRIGGELIHL 590 Query: 546 RPD---RPADKAYKARRNDGG 563 D +P+ + N GG Sbjct: 591 ELDNGRKPSGDRGAYQGNRGG 611 >tr|A4QDC0|A4QDC0_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 729 Score = 601 bits (1550), Expect = e-170 Identities = 326/565 (57%), Positives = 402/565 (71%), Gaps = 17/565 (3%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 F L + V+ A+ VGYE+P+ IQA TIP LM G DVVGLAQTGTGKTAAFA+PILS+ Sbjct: 104 FDALGLPERVLDAVRKVGYETPSPIQAQTIPILMEGQDVVGLAQTGTGKTAAFALPILSR 163 Query: 75 IDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGAQ 134 ID + + QALVLAPTRELALQVA++F + H+ LNVLP+YGG +Y IQL+GLRRGA Sbjct: 164 IDKSVRSPQALVLAPTRELALQVADSFQSFADHVGGLNVLPIYGGQAYGIQLSGLRRGAH 223 Query: 135 VVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALFS 194 +VVGTPGR+IDHLE+ +LD+S + +LVLDEADEML MGF EDVERIL +TP+ KQVALFS Sbjct: 224 IVVGTPGRIIDHLEKGSLDISGLRFLVLDEADEMLNMGFQEDVERILEDTPDEKQVALFS 283 Query: 195 ATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFEA 254 ATMP IR+++ +YL++P E+ +++T T NI+QR++ VA KMDALTR+LEV FEA Sbjct: 284 ATMPNGIRRLSKQYLNNPAEITVKSETRTNTNITQRFLNVAHRNKMDALTRILEVTEFEA 343 Query: 255 MIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAAR 314 MI+FVRTK TEEVAEKLRARGFSAAAINGDI Q QRERT+ L+DG +DILVATDVAAR Sbjct: 344 MIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAAR 403 Query: 315 GLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQT 374 GLDVERISHVLN+DIP+DTESYVH +LFV+PRER +L+ IE+AT Sbjct: 404 GLDVERISHVLNFDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERATNAP 463 Query: 375 LTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALAL 434 L E ELPTV+ VN R KFADSIT +L + ++LFR LV++Y + ++VP+ DIAAALA Sbjct: 464 LHEMELPTVDQVNDFRKVKFADSITKSLEDKQMDLFRTLVKEYSQANDVPLEDIAAALAT 523 Query: 435 QSRDGEEFLLAPDPPP---------DQXXXXXXXXXXXXXXXXXSGGAF-------STYR 478 Q++ G+ FLL PP D+ G F +TYR Sbjct: 524 QAQSGD-FLLKELPPERRERNDRRRDRDFDDRGGRGRDRGDRGDRGSRFDRDDENLATYR 582 Query: 479 ISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRI 538 ++VGKR + PGAIVGA+ANEGGL+ DFG ITI D +LVELP LP+ L L TRI Sbjct: 583 LAVGKRQHIRPGAIVGALANEGGLNSKDFGRITIAADHTLVELPKDLPQSVLDNLRDTRI 642 Query: 539 SGVLINLRPDRPADKAYKARRNDGG 563 SG LIN+ D + R+D G Sbjct: 643 SGQLINIERDSGGRPPRRFERDDRG 667 >tr|A1R913|A1R913_ARTAT Tax_Id=290340 SubName: Full=Putative ATP-dependent RNA helicase;[Arthrobacter aurescens] Length = 726 Score = 599 bits (1545), Expect = e-169 Identities = 319/542 (58%), Positives = 389/542 (71%), Gaps = 8/542 (1%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 F DL I V+ A+ DVGYE P+ IQAATIP L+ G DVVGLAQTGTGKTAAFA+P LS+ Sbjct: 73 FVDLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPALSR 132 Query: 75 I------DTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAG 128 + + S TQALVLAPTRELALQVAEAF+ Y H+ VLPVYGGS+Y QLAG Sbjct: 133 LAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTVLPVYGGSAYGPQLAG 192 Query: 129 LRRGAQVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYK 188 LRRGAQVVVGTPGRVIDH+ + +LDLS + YLVLDEADEML MGFA+DVE+I +TPE + Sbjct: 193 LRRGAQVVVGTPGRVIDHIAKGSLDLSELQYLVLDEADEMLRMGFADDVEQIFQQTPETR 252 Query: 189 QVALFSATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLE 248 QVALFSATMP IR+++ +YL++P E+ ++KT T N QRY+QV GP K+DALTR+LE Sbjct: 253 QVALFSATMPGQIRRMSKQYLNNPAEISVKSKTTTGANTKQRYLQVMGPHKLDALTRILE 312 Query: 249 VEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVA 308 VE F+ +I FVRTK ATE++A+KL+ARGF AAAINGDIPQ QRERT+ AL++G IDILVA Sbjct: 313 VEEFDGVIAFVRTKMATEDLADKLKARGFQAAAINGDIPQQQRERTVDALKEGRIDILVA 372 Query: 309 TDVAARGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIE 368 TDVAARGLDVERISHV+NYDIPHDTESYVH +LF++PRE++LL+ IE Sbjct: 373 TDVAARGLDVERISHVINYDIPHDTESYVHRIGRTGRAGRSGDAILFMTPREKYLLRSIE 432 Query: 369 KATRQTLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADI 428 KATRQ + + LPT E VN R+ KFA+ IT L + + FR L+ YE EHNVP ++I Sbjct: 433 KATRQPVEQMHLPTAETVNTLRLGKFAERITETLESEDVAAFRDLISSYEEEHNVPASEI 492 Query: 429 AAALALQSRDGEEFLL--APDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHK 486 AAALA+ ++ G+ L+ P P Q +TYRI+VG+R + Sbjct: 493 AAALAVMAQGGQPLLVKELPAAPEYQKRERSKDGFGSRGPTRALTEGNATYRIAVGRRQR 552 Query: 487 VGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLR 546 V PG+IVGAIANEGG+ + G I I D SLVELP L E L+ L +TRI G LINL Sbjct: 553 VMPGSIVGAIANEGGISSAQIGGIDIRSDHSLVELPADLSPEQLRALSRTRIGGELINLE 612 Query: 547 PD 548 D Sbjct: 613 LD 614 >tr|A4AJZ0|A4AJZ0_9ACTN Tax_Id=312284 SubName: Full=ATP-dependent RNA helicase;[marine actinobacterium PHSC20C1] Length = 638 Score = 599 bits (1544), Expect = e-169 Identities = 320/575 (55%), Positives = 402/575 (69%), Gaps = 20/575 (3%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TF+DL + +V++A+ ++GYE+P+ IQAATIP L+ G DVVGLAQTGTGKTAAFA+PILS Sbjct: 18 TFSDLALSDAVLKAVREIGYETPSAIQAATIPTLLEGRDVVGLAQTGTGKTAAFALPILS 77 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 ++D + + QALVL+PTRELALQV EAF +Y H+ ++VLPVYGG +Y +QL+ LRRG Sbjct: 78 RLDVSQSKPQALVLSPTRELALQVCEAFEKYATHMRGVHVLPVYGGQAYGVQLSALRRGV 137 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGR++DHL + TLDLS + YLVLDEADEML MGFAEDVE IL++TPE KQVALF Sbjct: 138 HVVVGTPGRIMDHLAKGTLDLSELKYLVLDEADEMLKMGFAEDVETILADTPEDKQVALF 197 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP IR+I+ +YL D E+ +++T T+ N SQRY+ V+ P+K+DALTR+LEVE FE Sbjct: 198 SATMPAQIRRISKKYLRDAEEITVKSQTTTSANTSQRYLVVSYPQKVDALTRILEVENFE 257 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 MIVFVRTK TE +AEKLRARG+SAAAI+GD+ Q QRERT+ L+ G +DILVATDVAA Sbjct: 258 GMIVFVRTKSETENLAEKLRARGYSAAAISGDVAQAQRERTVNQLKSGKLDILVATDVAA 317 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHV+N+DIP DTESYVH + FV+PRER LL IEKATRQ Sbjct: 318 RGLDVDRISHVVNFDIPVDTESYVHRIGRTGRAGRSGSAISFVTPRERRLLTAIEKATRQ 377 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALS-NTGIELFRRLVEDYEREHNVPMADIAAAL 432 LT+ +LP+VEDVN+ R+ +F D+IT AL+ I FR ++ Y H++P D+AAAL Sbjct: 378 PLTQMQLPSVEDVNSTRLTRFDDAITEALNQQPRISAFRDIIAHYVEHHDIPETDVAAAL 437 Query: 433 ALQSRDGEEFLLA------------------PDPPPDQXXXXXXXXXXXXXXXXXSGGAF 474 A+ ++ LL+ D P S Sbjct: 438 AVVAQGDTPLLLSAEEERAQRFSEREERNSRTDRPERGGDRGGDRGGDRPERRPRSTKPM 497 Query: 475 STYRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLE 534 + YRI VGKR +V P IVGA+ANEGGL R DFGHI I PDFSLVELP + ++ L++L Sbjct: 498 TAYRIEVGKRQRVEPRQIVGALANEGGLSRDDFGHIQIRPDFSLVELPADMSKDVLERLR 557 Query: 535 QTRISGVLINLRPDRPADKAYKARRNDGGKPRRKR 569 TRISG LI + PDR A+ AR DG P R R Sbjct: 558 DTRISGKLIEISPDRKANGG-GARGADGKYPSRDR 591 >tr|C0E7B2|C0E7B2_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 715 Score = 598 bits (1543), Expect = e-169 Identities = 323/561 (57%), Positives = 398/561 (70%), Gaps = 26/561 (4%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 +F L + V++A+ +VG+E+P+ IQA TIP L+ G DV+GLAQTGTGKTAAFA+PILS Sbjct: 80 SFDTLGLPKPVVKAVENVGFETPSPIQAQTIPVLLDGHDVLGLAQTGTGKTAAFALPILS 139 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSR-LNVLPVYGGSSYAIQLAGLRRG 132 ID QAL+LAPTRELALQVA++F + HL ++VLP+YGG +Y IQL+GLRRG Sbjct: 140 LIDAEIRHPQALILAPTRELALQVADSFQVFVDHLDGDISVLPIYGGQAYGIQLSGLRRG 199 Query: 133 AQVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVAL 192 AQ+VVGTPGRVIDHLE+ +LD+S + +LVLDEADEML MGF EDVERIL++TPE KQVAL Sbjct: 200 AQIVVGTPGRVIDHLEKGSLDISELRFLVLDEADEMLNMGFQEDVERILADTPEEKQVAL 259 Query: 193 FSATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPF 252 FSATMP IR+++ +Y++DP E++ +++T T NI+QR++ VA K+DALTR+LEV F Sbjct: 260 FSATMPSGIRRLSKQYMNDPHEIQVKSETRTNTNITQRFLNVAHRNKLDALTRILEVTEF 319 Query: 253 EAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVA 312 EAMI+FVRTK TEE+AEKLRARGF+AAAINGDI Q QRERT+ L+DG +DILVATDVA Sbjct: 320 EAMIMFVRTKFETEELAEKLRARGFNAAAINGDIAQQQRERTVEQLKDGRLDILVATDVA 379 Query: 313 ARGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATR 372 ARGLDVERISHVLNYDIP DTESYVH +LFV+PRER L+ IE+AT Sbjct: 380 ARGLDVERISHVLNYDIPSDTESYVHRIGRTGRAGRSGEAILFVTPRERRFLRNIERATN 439 Query: 373 QTLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAAL 432 L E ELPTV++VN R AKFADSIT +L NT + +FR LV+ Y +H+VP+ DIAAAL Sbjct: 440 APLQEMELPTVDEVNESRKAKFADSITESLENTQVAVFRNLVKTYSEQHDVPLEDIAAAL 499 Query: 433 ALQSRDGEEFLLAPDPPP------------------DQXXXXXXXXXXXXXXXXXSGGAF 474 A Q+R G+EFL+ P D+ G F Sbjct: 500 ATQARAGDEFLMTEPPAEKRRNRRDRDRNDRGDRGYDRFDRDRDDRRGGYNRGDRGGRRF 559 Query: 475 -------STYRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPR 527 TYR++VGKR V PGAIVGA+ANEGGL DFG ITIG DF+LVELP LP+ Sbjct: 560 DRGSQDMETYRLAVGKRQHVRPGAIVGALANEGGLSNKDFGRITIGSDFTLVELPKGLPK 619 Query: 528 ETLKKLEQTRISGVLINLRPD 548 L TRISG LI++ D Sbjct: 620 SVFDNLRDTRISGQLIHIEKD 640 >tr|Q8NR96|Q8NR96_CORGL Tax_Id=1718 SubName: Full=Superfamily II DNA and RNA helicases;[Corynebacterium glutamicum] Length = 732 Score = 598 bits (1541), Expect = e-169 Identities = 325/567 (57%), Positives = 401/567 (70%), Gaps = 19/567 (3%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 F L + V+ A+ VGYE+P+ IQA TIP LM G DVVGLAQTGTGKTAAFA+PIL++ Sbjct: 104 FDALGLPERVLDAVRKVGYETPSPIQAQTIPILMEGQDVVGLAQTGTGKTAAFALPILAR 163 Query: 75 IDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGAQ 134 ID + + QALVLAPTRELALQVA++F + H+ LNVLP+YGG +Y IQL+GLRRGA Sbjct: 164 IDKSVRSPQALVLAPTRELALQVADSFQSFADHVGGLNVLPIYGGQAYGIQLSGLRRGAH 223 Query: 135 VVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALFS 194 +VVGTPGR+IDHLE+ +LD+S + +LVLDEADEML MGF EDVERIL +TP+ KQVALFS Sbjct: 224 IVVGTPGRIIDHLEKGSLDISGLRFLVLDEADEMLNMGFQEDVERILEDTPDEKQVALFS 283 Query: 195 ATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFEA 254 ATMP IR+++ +YL++P E+ +++T T NI+QR++ VA KMDALTR+LEV FEA Sbjct: 284 ATMPNGIRRLSKQYLNNPAEITVKSETRTNTNITQRFLNVAHRNKMDALTRILEVTEFEA 343 Query: 255 MIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAAR 314 MI+FVRTK TEEVAEKLRARGFSAAAINGDI Q QRERT+ L+DG +DILVATDVAAR Sbjct: 344 MIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAAR 403 Query: 315 GLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQT 374 GLDVERISHVLN+DIP+DTESYVH +LFV+PRER +L+ IE+AT Sbjct: 404 GLDVERISHVLNFDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERATNAP 463 Query: 375 LTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALAL 434 L E ELPTV+ VN R KFADSIT +L + ++LFR LV++Y + ++VP+ DIAAALA Sbjct: 464 LHEMELPTVDQVNDFRKVKFADSITKSLEDKQMDLFRTLVKEYSQANDVPLEDIAAALAT 523 Query: 435 QSRDGEEFLLAPDPPP-----------DQXXXXXXXXXXXXXXXXXSGGAF-------ST 476 Q++ G +FLL PP D G F +T Sbjct: 524 QAQSG-DFLLKELPPERRERNDRRRDRDFDDRGGRGRDRDRGDRGDRGSRFDRDDENLAT 582 Query: 477 YRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQT 536 YR++VGKR + PGAIVGA+ANEGGL+ DFG ITI D +LVELP LP+ L L T Sbjct: 583 YRLAVGKRQHIRPGAIVGALANEGGLNSKDFGRITIAADHTLVELPKDLPQSVLDNLRDT 642 Query: 537 RISGVLINLRPDRPADKAYKARRNDGG 563 RISG LIN+ D + R+D G Sbjct: 643 RISGQLINIERDSGGRPPRRFERDDRG 669 >tr|A9WNH6|A9WNH6_RENSM Tax_Id=288705 SubName: Full=ATP-dependent RNA helicase;[Renibacterium salmoninarum] Length = 652 Score = 597 bits (1540), Expect = e-168 Identities = 322/561 (57%), Positives = 395/561 (70%), Gaps = 16/561 (2%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 F D + V+ A+ DVGYE P+ IQAATIP L+ G DVVGLAQTGTGKTAAFA+P LS+ Sbjct: 46 FTDFGLDGRVLAALKDVGYEKPSPIQAATIPVLLEGRDVVGLAQTGTGKTAAFALPALSR 105 Query: 75 IDTTSTA--TQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRG 132 + TQ LVLAPTRELALQVAEAFS Y AH+ +VLPVYGGS+Y QLAGLRRG Sbjct: 106 MANLPATKDTQILVLAPTRELALQVAEAFSSYAAHMDNFSVLPVYGGSAYGPQLAGLRRG 165 Query: 133 AQVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVAL 192 AQVVVGTPGRVIDHL + +LDLS + YLVLDEADEML MGFA+DVE+IL+ETPE KQVAL Sbjct: 166 AQVVVGTPGRVIDHLSKGSLDLSNLQYLVLDEADEMLRMGFADDVEQILAETPEDKQVAL 225 Query: 193 FSATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPF 252 FSATMP IR+I +YL++P E+ +AKT T EN QRY+QV GP K+DA+TR+LEVE + Sbjct: 226 FSATMPGQIRRIAKKYLNNPAEISVKAKTTTGENTRQRYLQVMGPHKLDAMTRILEVEDY 285 Query: 253 EAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVA 312 + +I FVRTK ATEE+A+KL++RG+ AAAINGDIPQ QRERT+ ALR G ID+LVATDVA Sbjct: 286 DGVIAFVRTKMATEELADKLKSRGYRAAAINGDIPQQQRERTVEALRSGSIDVLVATDVA 345 Query: 313 ARGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATR 372 ARGLDVERIS V+NYDIPHDTESYVH +LF++PRE++LL+ IEKATR Sbjct: 346 ARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGRSGDAILFMTPREKYLLRAIEKATR 405 Query: 373 QTLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAAL 432 Q + + LP+ + +N R++KFAD IT L + + +FR L+ YE+EH+V A+IAAAL Sbjct: 406 QPVEQMHLPSADTINNLRLSKFADQITETLGSQELSVFRELISTYEQEHDVTAAEIAAAL 465 Query: 433 ALQSRDGEEFLL--APDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHKVGPG 490 A ++ GE L+ P P Q +TYRI+VG+R +V PG Sbjct: 466 AYMAQGGESLLVKDLPAAPEYQKRERAKDGFGSRGPTRTLTEGNATYRIAVGRRQRVMPG 525 Query: 491 AIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLRPDRP 550 +IVGAIANEGGL S G I I D +LVELP +L ++ + L +TRI G LI L D Sbjct: 526 SIVGAIANEGGLSSSQIGGIDIRADHTLVELPAELSKDQWRALSKTRIGGELIRLELD-- 583 Query: 551 ADKAYKARRNDGGKPRRKRLG 571 G KPR +R G Sbjct: 584 ----------SGRKPRSEREG 594 >tr|A0JZF7|A0JZF7_ARTS2 Tax_Id=290399 SubName: Full=DEAD/DEAH box helicase domain protein;[Arthrobacter sp.] Length = 747 Score = 597 bits (1539), Expect = e-168 Identities = 322/561 (57%), Positives = 395/561 (70%), Gaps = 15/561 (2%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 FADL I V+ A+ DVGYE P+ IQAATIP L+ G DVVGLAQTGTGKTAAFA+P LS+ Sbjct: 92 FADLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPALSR 151 Query: 75 I------DTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAG 128 + + S TQALVLAPTRELALQVAEAF+ Y H+ VLPVYGGS+Y QLAG Sbjct: 152 LAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTVLPVYGGSAYGPQLAG 211 Query: 129 LRRGAQVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYK 188 LRRGAQVVVGTPGRVIDH+ + +LDLS + YLVLDEADEML MGFAEDVE+I +TP + Sbjct: 212 LRRGAQVVVGTPGRVIDHISKGSLDLSELQYLVLDEADEMLRMGFAEDVEQIFQQTPSDR 271 Query: 189 QVALFSATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLE 248 QVALFSATMP IR+++ +YL++P E+ ++KT T N QRY+QV GP K+DALTR+LE Sbjct: 272 QVALFSATMPSQIRRMSKQYLNNPAEISVKSKTTTGANTRQRYLQVMGPHKLDALTRILE 331 Query: 249 VEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVA 308 VE F+ +I FVRTK ATE++A+KL++RGF AAAINGDIPQ QRERT+ AL++G IDILVA Sbjct: 332 VEEFDGVIAFVRTKMATEDLADKLKSRGFQAAAINGDIPQQQRERTVDALKEGRIDILVA 391 Query: 309 TDVAARGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIE 368 TDVAARGLDVERISHV+NYDIPHDTESYVH +LF++PRE++LL+ IE Sbjct: 392 TDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGDAILFMTPREKYLLRSIE 451 Query: 369 KATRQTLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADI 428 KATRQ + + LPT E VN R+ KFA+ IT L++ + FR L+ YE EHNVP ++I Sbjct: 452 KATRQPVEQMHLPTAETVNTLRLGKFAERITETLASEDVAPFRDLISSYEEEHNVPASEI 511 Query: 429 AAALALQSRDGEEFLL--APDPPPDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVGKRHK 486 AAALA+ ++ G+ L+ P P Q +TYRI+VG+R + Sbjct: 512 AAALAIMAQGGQPLLVKELPAAPEFQKRERSKDGFGSRGPTRTLTEGNATYRIAVGRRQR 571 Query: 487 VGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVLINLR 546 V PG+IVGAIANEGG+ + G I I D SLVELP L E L+ L +TRI G LI+L Sbjct: 572 VMPGSIVGAIANEGGISSAQIGGIDIRSDHSLVELPADLSPEQLRALSRTRIGGELIHLE 631 Query: 547 PDRPADKAYKARRNDGGKPRR 567 D R+ GG R Sbjct: 632 LD-------NGRKPSGGAGER 645 >tr|Q6M617|Q6M617_CORGL Tax_Id=1718 SubName: Full=Superfamily II DNA and RNA helicase;[Corynebacterium glutamicum] Length = 732 Score = 595 bits (1535), Expect = e-168 Identities = 324/567 (57%), Positives = 400/567 (70%), Gaps = 19/567 (3%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 F L + V+ A+ VGYE+P+ IQA TIP LM G DVVGLAQTGTGKTAAFA+PIL++ Sbjct: 104 FDALGLPERVLDAVRKVGYETPSPIQAQTIPILMEGQDVVGLAQTGTGKTAAFALPILAR 163 Query: 75 IDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGAQ 134 ID + + QALVLAPTRE ALQVA++F + H+ LNVLP+YGG +Y IQL+GLRRGA Sbjct: 164 IDKSVRSPQALVLAPTREQALQVADSFQSFADHVGGLNVLPIYGGQAYGIQLSGLRRGAH 223 Query: 135 VVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALFS 194 +VVGTPGR+IDHLE+ +LD+S + +LVLDEADEML MGF EDVERIL +TP+ KQVALFS Sbjct: 224 IVVGTPGRIIDHLEKGSLDISGLRFLVLDEADEMLNMGFQEDVERILEDTPDEKQVALFS 283 Query: 195 ATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFEA 254 ATMP IR+++ +YL++P E+ +++T T NI+QR++ VA KMDALTR+LEV FEA Sbjct: 284 ATMPNGIRRLSKQYLNNPAEITVKSETRTNTNITQRFLNVAHRNKMDALTRILEVTEFEA 343 Query: 255 MIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAAR 314 MI+FVRTK TEEVAEKLRARGFSAAAINGDI Q QRERT+ L+DG +DILVATDVAAR Sbjct: 344 MIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAAR 403 Query: 315 GLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQT 374 GLDVERISHVLN+DIP+DTESYVH +LFV+PRER +L+ IE+AT Sbjct: 404 GLDVERISHVLNFDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERATNAP 463 Query: 375 LTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALAL 434 L E ELPTV+ VN R KFADSIT +L + ++LFR LV++Y + ++VP+ DIAAALA Sbjct: 464 LHEMELPTVDQVNDFRKVKFADSITKSLEDKQMDLFRTLVKEYSQANDVPLEDIAAALAT 523 Query: 435 QSRDGEEFLLAPDPPP-----------DQXXXXXXXXXXXXXXXXXSGGAF-------ST 476 Q++ G +FLL PP D G F +T Sbjct: 524 QAQSG-DFLLKELPPERRERNDRRRDRDFDDRGGRGRDRDRGDRGDRGSRFDRDDENLAT 582 Query: 477 YRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQT 536 YR++VGKR + PGAIVGA+ANEGGL+ DFG ITI D +LVELP LP+ L L T Sbjct: 583 YRLAVGKRQHIRPGAIVGALANEGGLNSKDFGRITIAADHTLVELPKDLPQSVLDNLRDT 642 Query: 537 RISGVLINLRPDRPADKAYKARRNDGG 563 RISG LIN+ D + R+D G Sbjct: 643 RISGQLINIERDSGGRPPRRFERDDRG 669 >tr|C0XQJ2|C0XQJ2_9CORY Tax_Id=525263 SubName: Full=Superfamily II helicase; Flags: Fragment;[Corynebacterium lipophiloflavum DSM 44291] Length = 683 Score = 595 bits (1535), Expect = e-168 Identities = 321/562 (57%), Positives = 389/562 (69%), Gaps = 28/562 (4%) Query: 15 FADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILSK 74 F L + SV+ A+ VG+E P+ IQA TIP LM G DVVGLAQTGTGKTAAFA+P+LS+ Sbjct: 106 FEKLDLPDSVIAAVKMVGFEQPSPIQAETIPLLMEGRDVVGLAQTGTGKTAAFALPVLSQ 165 Query: 75 IDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGAQ 134 ID QALVLAPTRELALQVA++F + HL ++ VLP+YGG +Y IQL+GLRRGAQ Sbjct: 166 IDPQLRHPQALVLAPTRELALQVADSFQSFADHLGKIQVLPIYGGQAYGIQLSGLRRGAQ 225 Query: 135 VVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALFS 194 ++VGTPGRVIDHLE+ +LD+S + +LVLDEADEML MGF EDVERIL +TP KQVALFS Sbjct: 226 IIVGTPGRVIDHLEKGSLDISNLRFLVLDEADEMLNMGFQEDVERILEDTPNTKQVALFS 285 Query: 195 ATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFEA 254 ATMP IRKI+ +YL+DP EV +++T T NI+QRY+ A K+DA+TR+LEV FEA Sbjct: 286 ATMPNGIRKISKQYLNDPAEVTVKSETRTNTNITQRYLFTAHRNKLDAITRILEVTEFEA 345 Query: 255 MIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAAR 314 MIVFVRTK TEE+AEKLRARGFSAAAINGDI Q QRERT+ LRDG +DILVATDVAAR Sbjct: 346 MIVFVRTKHETEELAEKLRARGFSAAAINGDIAQQQRERTVDQLRDGRLDILVATDVAAR 405 Query: 315 GLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQT 374 GLDVERISHV NYDIP+D ESYVH +LFV+PRER +L+ IE+ T T Sbjct: 406 GLDVERISHVFNYDIPNDIESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNAT 465 Query: 375 LTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALAL 434 + E ELPTV++VN R KF DSIT +L + ++F+ +V +Y +N+PM DIAAALA Sbjct: 466 IEEMELPTVDEVNESRKLKFMDSITASLESKDQDVFKAMVREYSNTNNIPMDDIAAALAA 525 Query: 435 QSRDGEEFLLAPDPPPDQXXXXXXXXXXXXXXXXXSGGA--------------------- 473 Q+ EFL+ +PP D+ G Sbjct: 526 QANAAGEFLM-KEPPKDKRDRRDRDGWDRDDRRDRDRGGRRDRFNRGDRGDRGDRGGRGR 584 Query: 474 ------FSTYRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPR 527 F TYR+ VGKR V PGAIVGA+ANEGGL+ DFG ITIG DF+LVELP L Sbjct: 585 QNDSENFDTYRLDVGKRQHVRPGAIVGALANEGGLNSRDFGRITIGGDFTLVELPKNLDS 644 Query: 528 ETLKKLEQTRISGVLINLRPDR 549 L +L TRISG LIN++ D+ Sbjct: 645 SVLDRLSDTRISGQLINIQRDK 666 >tr|A5CQB6|A5CQB6_CLAM3 Tax_Id=443906 SubName: Full=Putative ATP-dependent RNA helicase;[Clavibacter michiganensis subsp. michiganensis] Length = 586 Score = 595 bits (1534), Expect = e-168 Identities = 316/567 (55%), Positives = 405/567 (71%), Gaps = 14/567 (2%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TF+DL + V++A+ DVGYE+P+ IQAATIP+L++G DV+G+AQTGTGKTAAFA+PILS Sbjct: 19 TFSDLGLSDQVLKALKDVGYETPSAIQAATIPSLLSGRDVLGVAQTGTGKTAAFALPILS 78 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 +D + QALVLAPTRELALQV EAF RY + + ++VLPVYGG Y +QL+ LRRG Sbjct: 79 NLDVSQKTPQALVLAPTRELALQVCEAFERYASGMRGVHVLPVYGGQGYGVQLSALRRGV 138 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGR++DHL++ TLDLS++ +LVLDEADEML MGFAEDVE IL++TP+ KQ+ALF Sbjct: 139 HVVVGTPGRIMDHLDKGTLDLSQLKFLVLDEADEMLKMGFAEDVETILADTPKSKQIALF 198 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP IR+I+ +YL DP E+ + KT T+ N +QRY+ V+ P+K+DALTR+LE E FE Sbjct: 199 SATMPAQIRRISGKYLQDPEEITVKNKTTTSANTTQRYLMVSYPQKVDALTRILETENFE 258 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 MIVFVRTK TE +AEKLRARG++AAAI+GD+ Q QRERT+ L++G +DILVATDVAA Sbjct: 259 GMIVFVRTKNETETLAEKLRARGYAAAAISGDVAQAQRERTVEQLKNGKLDILVATDVAA 318 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHV+NYDIP DTESYVH + FV+PRER LL IEKATRQ Sbjct: 319 RGLDVDRISHVVNYDIPIDTESYVHRIGRTGRAGRSGAAISFVTPRERRLLTAIEKATRQ 378 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSN-TGIELFRRLVEDYEREHNVPMADIAAAL 432 LTE +P+ EDVN R+++F D+IT AL++ ++ FR +V Y H+V +D+AAAL Sbjct: 379 PLTEMRMPSAEDVNVTRLSRFDDAITAALADRERLDAFRDIVGHYVNHHDVVESDVAAAL 438 Query: 433 ALQSRDGEEFLLAPD---PP-------PDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVG 482 A+ ++ LL+ D PP D+ G +TYRI VG Sbjct: 439 AIVAQGDTPLLLSADDLRPPRVERERRDDRPGRDGDERGERRARPARGSGNMATYRIDVG 498 Query: 483 KRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVL 542 +RH+V P IVGA+ANEGG R DFGHI I PDFSLVELP LP++ + +L T I+G Sbjct: 499 RRHRVEPRQIVGALANEGGFSREDFGHIDIRPDFSLVELPAGLPQDRIDRLASTVINGRP 558 Query: 543 INLRPDRPADKAYK---ARRNDGGKPR 566 I++RPDR +A + A G KPR Sbjct: 559 IDIRPDRGGPRAAERGAAPERRGRKPR 585 >tr|C5VDV6|C5VDV6_9CORY Tax_Id=553207 SubName: Full=Cold-shock DEAD box protein A; EC=3.6.1.-;[Corynebacterium matruchotii ATCC 14266] Length = 721 Score = 595 bits (1534), Expect = e-168 Identities = 322/565 (56%), Positives = 399/565 (70%), Gaps = 30/565 (5%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 +F L + V++A+ +VG+E+P+ IQA TIP L+ G DV+GLAQTGTGKTAAFA+PILS Sbjct: 73 SFDTLGLPKPVVKAVENVGFETPSPIQAQTIPVLLDGHDVLGLAQTGTGKTAAFALPILS 132 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSR-LNVLPVYGGSSYAIQLAGLRRG 132 ID QAL+LAPTRELALQVA++F + HL ++VLP+YGG +Y IQL+GLRRG Sbjct: 133 LIDADIRHPQALILAPTRELALQVADSFQVFVDHLDGDISVLPIYGGQAYGIQLSGLRRG 192 Query: 133 AQVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVAL 192 AQ+VVGTPGRVIDHLE+ +LD+S + +LVLDEADEML MGF EDVERIL++TPE KQVAL Sbjct: 193 AQIVVGTPGRVIDHLEKGSLDISELRFLVLDEADEMLNMGFQEDVERILADTPEDKQVAL 252 Query: 193 FSATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPF 252 FSATMP IR+++ +Y++DP E++ +++T T NI+QR++ VA K+DALTR+LEV F Sbjct: 253 FSATMPSGIRRLSKQYMNDPHEIQVKSETRTNTNITQRFLNVAHRNKLDALTRILEVTEF 312 Query: 253 EAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVA 312 EAMI+FVRTK TEE+AEKLRARGF+AAAINGDI Q QRERT+ L+DG +DILVATDVA Sbjct: 313 EAMIMFVRTKFETEELAEKLRARGFNAAAINGDIAQQQRERTVEQLKDGRLDILVATDVA 372 Query: 313 ARGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATR 372 ARGLDVERISHVLNYDIP DTESYVH +LFV+PRER L+ IE+AT Sbjct: 373 ARGLDVERISHVLNYDIPSDTESYVHRIGRTGRAGRSGEAILFVTPRERRFLRNIERATN 432 Query: 373 QTLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAAL 432 L E ELPTV++VN R AKFADSIT +L NT + +FR LV+ Y +H+VP+ DIAAAL Sbjct: 433 APLQEMELPTVDEVNESRKAKFADSITESLENTQVAVFRNLVKAYSEQHDVPLEDIAAAL 492 Query: 433 ALQSRDGEEFLLAPDP--------PPDQXXXXXXXXXXXXXXXXXSGGAFS--------- 475 A Q+R G+EFL+ P D+ G ++ Sbjct: 493 ATQARAGDEFLMTEPPVEKRRNRRDRDRNDRGDRGYDRFDRDRDDRRGGYNRGDRGDRGG 552 Query: 476 ------------TYRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPV 523 TYR++VGKR V PGAIVGA+ANEGGL DFG ITIG DF+LVELP Sbjct: 553 RGRFDRGSQDMETYRLAVGKRQHVRPGAIVGALANEGGLSNKDFGRITIGSDFTLVELPK 612 Query: 524 KLPRETLKKLEQTRISGVLINLRPD 548 LP+ L TRISG LI++ D Sbjct: 613 GLPKSVFDNLRDTRISGQLIHIEKD 637 >tr|B0RE04|B0RE04_CLAMS Tax_Id=31964 (deaD)SubName: Full=Cold-shock DEAD-box RNA helicase;[Clavibacter michiganensis subsp. sepedonicus] Length = 585 Score = 592 bits (1527), Expect = e-167 Identities = 316/567 (55%), Positives = 402/567 (70%), Gaps = 14/567 (2%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 TF+DL + V++A+ DVGYE+P+ IQAATIP+L++G DV+G+AQTGTGKTAAFA+PILS Sbjct: 18 TFSDLGLSDQVLKALKDVGYETPSAIQAATIPSLLSGRDVLGVAQTGTGKTAAFALPILS 77 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 +D QALVLAPTRELALQV EAF RY + + ++VLPVYGG Y +QL+ LRRG Sbjct: 78 NLDVAQKTPQALVLAPTRELALQVCEAFERYASGMRGVHVLPVYGGQGYGVQLSALRRGV 137 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 VVVGTPGR++DHL++ TLDLS++ +LVLDEADEML MGFAEDVE IL++TP+ KQ+ALF Sbjct: 138 HVVVGTPGRIMDHLDKGTLDLSQLKFLVLDEADEMLKMGFAEDVETILADTPKSKQIALF 197 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP IR+I+ +YL DP E+ + KT T+ N +QRY+ V+ P+K+DALTR+LE E FE Sbjct: 198 SATMPAQIRRISGKYLQDPEEITVKNKTTTSANTTQRYLMVSYPQKVDALTRILETENFE 257 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 MIVFVRTK TE +AEKLRARG++AAAI+GD+ Q QRERT+ L++G +DILVATDVAA Sbjct: 258 GMIVFVRTKNETETLAEKLRARGYAAAAISGDVAQAQRERTVEQLKNGKLDILVATDVAA 317 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RISHV+NYDIP DTESYVH + FV+PRER LL IEKATRQ Sbjct: 318 RGLDVDRISHVVNYDIPIDTESYVHRIGRTGRAGRSGAAISFVTPRERRLLTAIEKATRQ 377 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSN-TGIELFRRLVEDYEREHNVPMADIAAAL 432 LTE +P+ EDVN R+++F D+IT AL++ ++ FR +V Y H+V +D+AAAL Sbjct: 378 PLTEMRMPSAEDVNVTRLSRFDDAITAALADRERLDAFRDIVGHYVNHHDVVESDVAAAL 437 Query: 433 ALQSRDGEEFLLAPD---PP-------PDQXXXXXXXXXXXXXXXXXSGGAFSTYRISVG 482 A+ ++ LL+ D PP D+ G +TYRI VG Sbjct: 438 AIVAQGDTPLLLSADDLRPPRVERERRDDRPGRDGDDRGERRARPARGSGNMATYRIDVG 497 Query: 483 KRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISGVL 542 +RH+V P IVGA+ANEGG R DFGHI I PDFSLVELP + L+KL T I+G Sbjct: 498 RRHRVEPRQIVGALANEGGFSREDFGHIDIRPDFSLVELPAATSDDQLRKLANTLINGRP 557 Query: 543 INLRPDRPADKAYK---ARRNDGGKPR 566 I++RPDR +A + A G KPR Sbjct: 558 IDIRPDRGGPRAAERGAAPERRGRKPR 584 >tr|Q4JUG8|Q4JUG8_CORJK Tax_Id=306537 (deaD)SubName: Full=ATP-dependent RNA helicase;[Corynebacterium jeikeium] Length = 713 Score = 592 bits (1525), Expect = e-167 Identities = 317/573 (55%), Positives = 396/573 (69%), Gaps = 23/573 (4%) Query: 14 TFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPILS 73 +F L + +V+ A+ VG+E P+ IQA TIP LM G DVVGLAQTGTGKTAAFA+PILS Sbjct: 75 SFDGLGLPENVLAAVKKVGFEVPSPIQAETIPVLMEGHDVVGLAQTGTGKTAAFALPILS 134 Query: 74 KIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGSSYAIQLAGLRRGA 133 +ID + QALVLAPTRELALQVAE+F + HL ++VLP+YGG +Y +QL+GLRRGA Sbjct: 135 RIDVSKRHPQALVLAPTRELALQVAESFQSFSEHLGGIHVLPIYGGQAYGVQLSGLRRGA 194 Query: 134 QVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERILSETPEYKQVALF 193 +VVGTPGRVIDHLE+ +LD+S + ++VLDEADEML MGF EDVERIL +TP KQVALF Sbjct: 195 HIVVGTPGRVIDHLEKGSLDISELRFMVLDEADEMLNMGFQEDVERILEDTPSDKQVALF 254 Query: 194 SATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKMDALTRVLEVEPFE 253 SATMP IR+++ +YL DP E+ +A T+ENI Q Y+ V+ K+DALTR+LE+ FE Sbjct: 255 SATMPSGIRRLSKQYLSDPREITVKATQRTSENIEQDYLLVSHRDKLDALTRILEITEFE 314 Query: 254 AMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRDGGIDILVATDVAA 313 AMI+FVRTK TEE+AE+LRARGF+AAAINGDIPQ RERT+ L+DG +DILVATDVAA Sbjct: 315 AMIMFVRTKNETEELAERLRARGFNAAAINGDIPQNLRERTVDQLKDGRLDILVATDVAA 374 Query: 314 RGLDVERISHVLNYDIPHDTESYVHXXXXXXXXXXXXXXLLFVSPRERHLLKLIEKATRQ 373 RGLDV+RI+HV NYDIPHDTESYVH +LFV+PRER LLK IE+AT+ Sbjct: 375 RGLDVDRITHVFNYDIPHDTESYVHRIGRTGRAGRKGRAILFVTPRERRLLKSIERATKS 434 Query: 374 TLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYEREHNVPMADIAAALA 433 L E ELPTV+ VN R KF DS+T +L++ I +FR LV++Y + V +ADIAAALA Sbjct: 435 RLNEIELPTVDAVNEARKEKFRDSLTESLADPQIGIFRDLVKEYAESNEVELADIAAALA 494 Query: 434 LQSRDGEEFLLAPDPPPDQ------------------XXXXXXXXXXXXXXXXXSGGAFS 475 Q + GE+FL+ P ++ +G + Sbjct: 495 AQLQAGEDFLMKEKPKEERPRRRDRYGDDNRSGGGAYKPFDERFNKEAPRITDRNGKELA 554 Query: 476 TYRISVGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQ 535 YR+SVG R +V PGAIVGA+ANEGG+ DFG I+I + SLVELP LP E L+Q Sbjct: 555 VYRLSVGHRQRVRPGAIVGALANEGGMSSRDFGRISIFAEHSLVELPADLPMEVFHALDQ 614 Query: 536 TRISGVLINLRPDRPADKA-----YKARRNDGG 563 TR+SG LIN+ PD A + + RND G Sbjct: 615 TRVSGQLINIEPDPGAPEGRPGSHKRQHRNDRG 647 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.135 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 3,713,654,314 Number of extensions: 144113482 Number of successful extensions: 508610 Number of sequences better than 10.0: 19614 Number of HSP's gapped: 478031 Number of HSP's successfully gapped: 21772 Length of query: 571 Length of database: 3,846,993,858 Length adjustment: 143 Effective length of query: 428 Effective length of database: 2,234,639,829 Effective search space: 956425846812 Effective search space used: 956425846812 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 83 (36.6 bits)