BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_4219
         (212 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HS49|B2HS49_MYCMM Tax_Id=216594 SubName: Full=Transcription...   418   e-115
tr|Q7U0D1|Q7U0D1_MYCBO Tax_Id=1765 SubName: Full=PROBABLE TRANSC...   347   6e-94
tr|O86312|O86312_MYCTU Tax_Id=1773 SubName: Full=PROBABLE TRANSC...   347   6e-94
tr|C6DUF3|C6DUF3_MYCTK Tax_Id=478434 SubName: Full=Transcription...   347   6e-94
tr|A5U1R7|A5U1R7_MYCTA Tax_Id=419947 SubName: Full=Putative tran...   347   6e-94
tr|A5WLP7|A5WLP7_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   347   6e-94
tr|A4KGE3|A4KGE3_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   347   6e-94
tr|A2VHB9|A2VHB9_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   347   6e-94
tr|C1AML3|C1AML3_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   342   2e-92
tr|A1KI07|A1KI07_MYCBP Tax_Id=410289 SubName: Full=Probable tran...   342   2e-92
tr|A0QCG9|A0QCG9_MYCA1 Tax_Id=243243 SubName: Full=Transcription...   339   1e-91
tr|Q73WV1|Q73WV1_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   333   6e-90
tr|A3Q3Q8|A3Q3Q8_MYCSJ Tax_Id=164757 SubName: Full=Transcription...   321   4e-86
tr|Q1B4T3|Q1B4T3_MYCSS Tax_Id=164756 SubName: Full=Transcription...   311   2e-83
tr|A1UKA4|A1UKA4_MYCSK Tax_Id=189918 SubName: Full=Transcription...   311   2e-83
tr|A1TDM3|A1TDM3_MYCVP Tax_Id=350058 SubName: Full=Transcription...   301   2e-80
tr|A0R2D6|A0R2D6_MYCS2 Tax_Id=246196 SubName: Full=Probable tran...   297   4e-79
tr|A4T8W8|A4T8W8_MYCGI Tax_Id=350054 SubName: Full=Transcription...   270   1e-70
tr|B1MLL9|B1MLL9_MYCA9 Tax_Id=561007 SubName: Full=Probable tran...   230   7e-59
tr|A1T4Y0|A1T4Y0_MYCVP Tax_Id=350058 SubName: Full=Transcription...   226   1e-57
tr|Q0SCH5|Q0SCH5_RHOSR Tax_Id=101510 SubName: Full=Possible tran...   216   1e-54
tr|C1B500|C1B500_RHOOB Tax_Id=632772 SubName: Full=Putative TetR...   213   1e-53
tr|C1YU62|C1YU62_NOCDA Tax_Id=446468 SubName: Full=Transcription...   207   8e-52
tr|C1RI82|C1RI82_9CELL Tax_Id=446466 SubName: Full=Transcription...   189   1e-46
tr|Q5YWW6|Q5YWW6_NOCFA Tax_Id=37329 SubName: Full=Putative trans...   189   2e-46
tr|C1WSQ8|C1WSQ8_9ACTO Tax_Id=479435 SubName: Full=Transcription...   186   1e-45
tr|C5BXC6|C5BXC6_BEUC1 Tax_Id=471853 SubName: Full=Transcription...   157   9e-37
tr|C7MD23|C7MD23_BRAFD Tax_Id=446465 SubName: Full=Transcription...   138   3e-31
tr|C8XGG5|C8XGG5_NAKMY Tax_Id=479431 SubName: Full=Transcription...   137   1e-30
tr|C5C3T9|C5C3T9_BEUC1 Tax_Id=471853 SubName: Full=Transcription...   134   6e-30
tr|D1BU20|D1BU20_9MICO Tax_Id=446471 SubName: Full=Transcription...   132   2e-29
tr|B2HQ22|B2HQ22_MYCMM Tax_Id=216594 SubName: Full=Transcription...   117   8e-25
tr|A4X948|A4X948_SALTO Tax_Id=369723 SubName: Full=Regulatory pr...   101   6e-20
tr|A8LV03|A8LV03_SALAI Tax_Id=391037 SubName: Full=Transcription...   100   1e-19
tr|A4AIQ4|A4AIQ4_9ACTN Tax_Id=312284 SubName: Full=Probable tran...   100   1e-19
tr|A9WQM4|A9WQM4_RENSM Tax_Id=288705 SubName: Full=Transcription...    90   2e-16
tr|C7QAH3|C7QAH3_CATAD Tax_Id=479433 SubName: Full=Transcription...    89   2e-16
tr|B1MMP2|B1MMP2_MYCA9 Tax_Id=561007 SubName: Full=Putative unch...    89   3e-16
tr|C4EI42|C4EI42_STRRS Tax_Id=479432 SubName: Full=Transcription...    87   1e-15
tr|Q73V01|Q73V01_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...    86   3e-15
tr|C4DS13|C4DS13_9ACTO Tax_Id=446470 SubName: Full=Transcription...    83   2e-14
tr|A0QJW1|A0QJW1_MYCA1 Tax_Id=243243 SubName: Full=Transcription...    83   2e-14
tr|C8X7L5|C8X7L5_NAKMY Tax_Id=479431 SubName: Full=Transcription...    80   1e-13
tr|A0PNV2|A0PNV2_MYCUA Tax_Id=362242 SubName: Full=Transcription...    79   2e-13
tr|Q0RJZ3|Q0RJZ3_FRAAA Tax_Id=326424 SubName: Full=Putative HTH-...    78   6e-13
tr|B2HPE2|B2HPE2_MYCMM Tax_Id=216594 SubName: Full=Transcription...    78   6e-13
tr|C1YWJ8|C1YWJ8_NOCDA Tax_Id=446468 SubName: Full=Transcription...    78   7e-13
tr|A8M5M5|A8M5M5_SALAI Tax_Id=391037 SubName: Full=Transcription...    73   2e-11
tr|A4X1J6|A4X1J6_SALTO Tax_Id=369723 SubName: Full=Transcription...    73   2e-11
tr|Q49968|Q49968_MYCLE Tax_Id=1769 SubName: Full=U1756s;[Mycobac...    70   1e-10

>tr|B2HS49|B2HS49_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulator;[Mycobacterium marinum]
          Length = 212

 Score =  418 bits (1074), Expect = e-115
 Identities = 212/212 (100%), Positives = 212/212 (100%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY
Sbjct: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA
Sbjct: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL
Sbjct: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESHGH 212
           PSLEIYTEGLMADSTMYDAFLAQDNQGESHGH
Sbjct: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESHGH 212


>tr|Q7U0D1|Q7U0D1_MYCBO Tax_Id=1765 SubName: Full=PROBABLE
           TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis]
          Length = 212

 Score =  347 bits (889), Expect = 6e-94
 Identities = 169/210 (80%), Positives = 189/210 (90%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTA ARIR+AAIEQFG+HGFGV LRAIAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 1   MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           VAEEIRS K  A++SNDP TWL Q+A++ESYAPLMAYLVRSMQSGGELA MLWQ+MIDNA
Sbjct: 61  VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           EEYL  GVRAGT+K SRDP+ARA+FLAITG GGFLLYLQMH+ PTDLRA LRDYA DM+L
Sbjct: 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESH 210
           PSLE+YTEGL+AD  MY+AFLA+  QGE+H
Sbjct: 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210


>tr|O86312|O86312_MYCTU Tax_Id=1773 SubName: Full=PROBABLE
           TRANSCRIPTIONAL REGULATORY PROTEIN; SubName:
           Full=Transcriptional regulator, TetR
           family;[Mycobacterium tuberculosis]
          Length = 212

 Score =  347 bits (889), Expect = 6e-94
 Identities = 169/210 (80%), Positives = 189/210 (90%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTA ARIR+AAIEQFG+HGFGV LRAIAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 1   MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           VAEEIRS K  A++SNDP TWL Q+A++ESYAPLMAYLVRSMQSGGELA MLWQ+MIDNA
Sbjct: 61  VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           EEYL  GVRAGT+K SRDP+ARA+FLAITG GGFLLYLQMH+ PTDLRA LRDYA DM+L
Sbjct: 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESH 210
           PSLE+YTEGL+AD  MY+AFLA+  QGE+H
Sbjct: 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210


>tr|C6DUF3|C6DUF3_MYCTK Tax_Id=478434 SubName: Full=Transcriptional
           regulator;[Mycobacterium tuberculosis]
          Length = 212

 Score =  347 bits (889), Expect = 6e-94
 Identities = 169/210 (80%), Positives = 189/210 (90%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTA ARIR+AAIEQFG+HGFGV LRAIAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 1   MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           VAEEIRS K  A++SNDP TWL Q+A++ESYAPLMAYLVRSMQSGGELA MLWQ+MIDNA
Sbjct: 61  VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           EEYL  GVRAGT+K SRDP+ARA+FLAITG GGFLLYLQMH+ PTDLRA LRDYA DM+L
Sbjct: 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESH 210
           PSLE+YTEGL+AD  MY+AFLA+  QGE+H
Sbjct: 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210


>tr|A5U1R7|A5U1R7_MYCTA Tax_Id=419947 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 212

 Score =  347 bits (889), Expect = 6e-94
 Identities = 169/210 (80%), Positives = 189/210 (90%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTA ARIR+AAIEQFG+HGFGV LRAIAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 1   MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           VAEEIRS K  A++SNDP TWL Q+A++ESYAPLMAYLVRSMQSGGELA MLWQ+MIDNA
Sbjct: 61  VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           EEYL  GVRAGT+K SRDP+ARA+FLAITG GGFLLYLQMH+ PTDLRA LRDYA DM+L
Sbjct: 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESH 210
           PSLE+YTEGL+AD  MY+AFLA+  QGE+H
Sbjct: 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210


>tr|A5WLP7|A5WLP7_MYCTF Tax_Id=336982 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis]
          Length = 212

 Score =  347 bits (889), Expect = 6e-94
 Identities = 169/210 (80%), Positives = 189/210 (90%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTA ARIR+AAIEQFG+HGFGV LRAIAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 1   MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           VAEEIRS K  A++SNDP TWL Q+A++ESYAPLMAYLVRSMQSGGELA MLWQ+MIDNA
Sbjct: 61  VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           EEYL  GVRAGT+K SRDP+ARA+FLAITG GGFLLYLQMH+ PTDLRA LRDYA DM+L
Sbjct: 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESH 210
           PSLE+YTEGL+AD  MY+AFLA+  QGE+H
Sbjct: 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210


>tr|A4KGE3|A4KGE3_MYCTU Tax_Id=395095 SubName: Full=Hypothetical
           transcriptional regulatory protein;[Mycobacterium
           tuberculosis str. Haarlem]
          Length = 212

 Score =  347 bits (889), Expect = 6e-94
 Identities = 169/210 (80%), Positives = 189/210 (90%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTA ARIR+AAIEQFG+HGFGV LRAIAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 1   MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           VAEEIRS K  A++SNDP TWL Q+A++ESYAPLMAYLVRSMQSGGELA MLWQ+MIDNA
Sbjct: 61  VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           EEYL  GVRAGT+K SRDP+ARA+FLAITG GGFLLYLQMH+ PTDLRA LRDYA DM+L
Sbjct: 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESH 210
           PSLE+YTEGL+AD  MY+AFLA+  QGE+H
Sbjct: 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210


>tr|A2VHB9|A2VHB9_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 212

 Score =  347 bits (889), Expect = 6e-94
 Identities = 169/210 (80%), Positives = 189/210 (90%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTA ARIR+AAIEQFG+HGFGV LRAIAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 1   MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           VAEEIRS K  A++SNDP TWL Q+A++ESYAPLMAYLVRSMQSGGELA MLWQ+MIDNA
Sbjct: 61  VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           EEYL  GVRAGT+K SRDP+ARA+FLAITG GGFLLYLQMH+ PTDLRA LRDYA DM+L
Sbjct: 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESH 210
           PSLE+YTEGL+AD  MY+AFLA+  QGE+H
Sbjct: 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210


>tr|C1AML3|C1AML3_MYCBT Tax_Id=561275 SubName: Full=Putative
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 212

 Score =  342 bits (876), Expect = 2e-92
 Identities = 168/210 (80%), Positives = 188/210 (89%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTA ARIR+AAIEQFG+HGFGV LRAIAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 1   MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           VAEEIRS K  A++SNDP TWL Q+A++ESYAPLMAYLVRSMQSGGELA ML Q+MIDNA
Sbjct: 61  VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLCQKMIDNA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           EEYL  GVRAGT+K SRDP+ARA+FLAITG GGFLLYLQMH+ PTDLRA LRDYA DM+L
Sbjct: 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESH 210
           PSLE+YTEGL+AD  MY+AFLA+  QGE+H
Sbjct: 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210


>tr|A1KI07|A1KI07_MYCBP Tax_Id=410289 SubName: Full=Probable
           transcriptional regulatory protein;[Mycobacterium bovis]
          Length = 212

 Score =  342 bits (876), Expect = 2e-92
 Identities = 168/210 (80%), Positives = 188/210 (89%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTA ARIR+AAIEQFG+HGFGV LRAIAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 1   MRSADLTAHARIREAAIEQFGRHGFGVGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDF 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           VAEEIRS K  A++SNDP TWL Q+A++ESYAPLMAYLVRSMQSGGELA ML Q+MIDNA
Sbjct: 61  VAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLCQKMIDNA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           EEYL  GVRAGT+K SRDP+ARA+FLAITG GGFLLYLQMH+ PTDLRA LRDYA DM+L
Sbjct: 121 EEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESH 210
           PSLE+YTEGL+AD  MY+AFLA+  QGE+H
Sbjct: 181 PSLEVYTEGLLADRAMYEAFLAEAQQGEAH 210


>tr|A0QCG9|A0QCG9_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator, TetR family protein;[Mycobacterium avium]
          Length = 215

 Score =  339 bits (870), Expect = 1e-91
 Identities = 163/212 (76%), Positives = 189/212 (89%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTAAARIRDAAIEQFG+HGFGV LR IAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 4   MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDH 63

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           +AE+IR  K  A+Q+NDPA W GQLA++E +APL+AY++RSMQ+GG+LA MLW+QMI+NA
Sbjct: 64  IAEQIRESKTEALQTNDPAVWFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENA 123

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           E YL  GVRAGTIK SRDP+ARAK+L ITG GG LLYLQMH  PTDLRAVLRDY+RDM+L
Sbjct: 124 EGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQMHDNPTDLRAVLRDYSRDMIL 183

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGESHGH 212
           P+LEIYTEGLMAD TMYDAFLA ++QG+SHG+
Sbjct: 184 PALEIYTEGLMADRTMYDAFLAAEDQGDSHGN 215


>tr|Q73WV1|Q73WV1_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 267

 Score =  333 bits (855), Expect = 6e-90
 Identities = 161/209 (77%), Positives = 186/209 (88%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           MRS DLTAAARIRDAAIEQFG+HGFGV LR IAE AGVSAALVIHHFGSKEGLRKACD++
Sbjct: 1   MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDH 60

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           +AE+IR  K  A+Q+NDPA W GQLA++E +APL+AY++RSMQ+GG+LA MLW+QMI+NA
Sbjct: 61  IAEQIRESKTEALQTNDPAVWFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENA 120

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLL 180
           E YL  GVRAGTIK SRDP+ARAK+L ITG GG LLYLQMH  PTDLRAVLRDY+RDM+L
Sbjct: 121 EGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQMHDNPTDLRAVLRDYSRDMIL 180

Query: 181 PSLEIYTEGLMADSTMYDAFLAQDNQGES 209
           P+LEIYTEGLMAD TMYDAFLA ++QG+S
Sbjct: 181 PALEIYTEGLMADRTMYDAFLAAEDQGDS 209


>tr|A3Q3Q8|A3Q3Q8_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 228

 Score =  321 bits (822), Expect = 4e-86
 Identities = 163/214 (76%), Positives = 183/214 (85%), Gaps = 4/214 (1%)

Query: 1   MRSV--DLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACD 58
           MRSV  D TA ARIRDAAIEQFG+HGFGV +RAIAE AGVSAALVIHHFGSK+GLR ACD
Sbjct: 1   MRSVAEDRTAVARIRDAAIEQFGKHGFGVGVRAIAEAAGVSAALVIHHFGSKDGLRAACD 60

Query: 59  NYVAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMID 118
           +YVAEEIRS K  A+QSNDPATWL QL+++ESYAPLMAYLVRSMQSG +LA MLW++MID
Sbjct: 61  DYVAEEIRSGKSAAIQSNDPATWLAQLSEIESYAPLMAYLVRSMQSGSDLAKMLWRRMID 120

Query: 119 NAEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDM 178
           N E+YL  GVRAGT+K S DP+ RA+FLA+   GGFLLYLQMH+ PTDLR VLRDY+ DM
Sbjct: 121 NVEQYLDEGVRAGTVKPSHDPRGRARFLAMASGGGFLLYLQMHEDPTDLRRVLRDYSDDM 180

Query: 179 LLPSLEIYTEGLMADSTMYDAFLAQDNQGESHGH 212
           +LP+LEIYT GLMADSTMYDAFLA  NQG S  H
Sbjct: 181 VLPALEIYTNGLMADSTMYDAFLA--NQGASSTH 212


>tr|Q1B4T3|Q1B4T3_MYCSS Tax_Id=164756 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 228

 Score =  311 bits (798), Expect = 2e-83
 Identities = 156/214 (72%), Positives = 178/214 (83%), Gaps = 4/214 (1%)

Query: 1   MRSVDL--TAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACD 58
           MRS D   T  ARIRDAAIEQFG+HGFGV +R IAE AGVS ALVIHHFGSK+GLRKACD
Sbjct: 1   MRSADADRTTLARIRDAAIEQFGRHGFGVGVRTIAESAGVSPALVIHHFGSKDGLRKACD 60

Query: 59  NYVAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMID 118
            YVAE IRS+K  ++QSNDPATWL Q+A++ESYAPLMAYLVRS+QSGG+LA   W++MID
Sbjct: 61  EYVAEVIRSDKSASIQSNDPATWLAQIAEIESYAPLMAYLVRSLQSGGDLARAFWRRMID 120

Query: 119 NAEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDM 178
           N E+YL  GVRAGT+K S DP+ RA+FLA+   GGFLLYLQMH+ PTDLR VLRDY+ DM
Sbjct: 121 NVEQYLDEGVRAGTVKPSHDPRGRARFLAMASGGGFLLYLQMHEDPTDLRRVLRDYSDDM 180

Query: 179 LLPSLEIYTEGLMADSTMYDAFLAQDNQGESHGH 212
           +LP+LEIYT GLMADSTMYDAFLA  NQG S  H
Sbjct: 181 VLPALEIYTNGLMADSTMYDAFLA--NQGASSTH 212


>tr|A1UKA4|A1UKA4_MYCSK Tax_Id=189918 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium sp.]
          Length = 228

 Score =  311 bits (798), Expect = 2e-83
 Identities = 156/214 (72%), Positives = 178/214 (83%), Gaps = 4/214 (1%)

Query: 1   MRSVDL--TAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACD 58
           MRS D   T  ARIRDAAIEQFG+HGFGV +R IAE AGVS ALVIHHFGSK+GLRKACD
Sbjct: 1   MRSADADRTTLARIRDAAIEQFGRHGFGVGVRTIAESAGVSPALVIHHFGSKDGLRKACD 60

Query: 59  NYVAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMID 118
            YVAE IRS+K  ++QSNDPATWL Q+A++ESYAPLMAYLVRS+QSGG+LA   W++MID
Sbjct: 61  EYVAEVIRSDKSASIQSNDPATWLAQIAEIESYAPLMAYLVRSLQSGGDLARAFWRRMID 120

Query: 119 NAEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDM 178
           N E+YL  GVRAGT+K S DP+ RA+FLA+   GGFLLYLQMH+ PTDLR VLRDY+ DM
Sbjct: 121 NVEQYLDEGVRAGTVKPSHDPRGRARFLAMASGGGFLLYLQMHEDPTDLRRVLRDYSDDM 180

Query: 179 LLPSLEIYTEGLMADSTMYDAFLAQDNQGESHGH 212
           +LP+LEIYT GLMADSTMYDAFLA  NQG S  H
Sbjct: 181 VLPALEIYTNGLMADSTMYDAFLA--NQGASSTH 212


>tr|A1TDM3|A1TDM3_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium vanbaalenii]
          Length = 220

 Score =  301 bits (772), Expect = 2e-80
 Identities = 146/208 (70%), Positives = 176/208 (84%), Gaps = 1/208 (0%)

Query: 1   MRSVD-LTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDN 59
           MRS D LTAAARIRDAAI+ FG+ GF V +R+IA  AGVS  LVIHHFGSK+GLRKACD+
Sbjct: 1   MRSADDLTAAARIRDAAIDLFGRDGFAVGVRSIASAAGVSPGLVIHHFGSKDGLRKACDD 60

Query: 60  YVAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDN 119
           +VAE +R+ K  A+QS+DPATWL Q+A++E YAPLMAYLVR++Q+GGELA MLWQ MIDN
Sbjct: 61  FVAETVRASKSEAIQSSDPATWLAQIAEIEEYAPLMAYLVRTLQTGGELAKMLWQNMIDN 120

Query: 120 AEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDML 179
           AE+Y+  GVRAGT+K S DP+ RA+FLA+ G GGFLLYLQMH  PTDLRAVLRDY+ +M+
Sbjct: 121 AEQYIEEGVRAGTVKPSADPRGRARFLAMAGGGGFLLYLQMHDNPTDLRAVLRDYSEEMV 180

Query: 180 LPSLEIYTEGLMADSTMYDAFLAQDNQG 207
           LP+LE+YT GLM DSTMYDAF+A+  QG
Sbjct: 181 LPALELYTNGLMTDSTMYDAFVARRAQG 208


>tr|A0R2D6|A0R2D6_MYCS2 Tax_Id=246196 SubName: Full=Probable
           transcriptional regulatory protein;[Mycobacterium
           smegmatis]
          Length = 216

 Score =  297 bits (761), Expect = 4e-79
 Identities = 146/203 (71%), Positives = 167/203 (82%)

Query: 5   DLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEE 64
           D TA ARIRD AIEQFGQHGF V LR+IAE AGVSAALVIHHFGSKEGLRKACD++VAE 
Sbjct: 3   DRTAMARIRDTAIEQFGQHGFNVGLRSIAEAAGVSAALVIHHFGSKEGLRKACDDHVAEV 62

Query: 65  IRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEYL 124
           I   K  +M ++DPATWL  +A++ESYAPLMAYLVRSMQSG ELA   W++M+DNAE+YL
Sbjct: 63  ILELKTESMHASDPATWLAYVAEIESYAPLMAYLVRSMQSGSELAKKFWRRMVDNAEQYL 122

Query: 125 AVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLLPSLE 184
             GVR G +K SRDP+ARA+FLAI G GGFLLYLQMH  PTDLRAVLRDY  DM+LP+LE
Sbjct: 123 EEGVRTGMLKPSRDPRARARFLAICGGGGFLLYLQMHDNPTDLRAVLRDYGEDMMLPALE 182

Query: 185 IYTEGLMADSTMYDAFLAQDNQG 207
           IY+ GLMAD+TMY+ FL Q   G
Sbjct: 183 IYSHGLMADTTMYETFLHQREAG 205


>tr|A4T8W8|A4T8W8_MYCGI Tax_Id=350054 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium gilvum]
          Length = 218

 Score =  270 bits (689), Expect = 1e-70
 Identities = 135/213 (63%), Positives = 169/213 (79%), Gaps = 6/213 (2%)

Query: 1   MRSVD-LTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDN 59
           MRSVD LTAAARIRDAA+E FG  GF VS+R IA  AGVS  LVIHHFGSK+ L KACD 
Sbjct: 1   MRSVDDLTAAARIRDAAVELFGAEGFAVSVRTIAAAAGVSPGLVIHHFGSKDQLHKACDA 60

Query: 60  YVAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDN 119
           YVAE +R+ K  ++Q++DPATWL Q+A++E YAPLMAYLVRS+Q+GGEL  MLW+ M ++
Sbjct: 61  YVAETVRAAKSESIQTSDPATWLAQMAEIEEYAPLMAYLVRSLQAGGELGKMLWRTMTND 120

Query: 120 AEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDML 179
            E+YL  GVRAGT+K S DP+ARA FL++   GGFLLYLQ+H++ TD+R VLRDY+  M+
Sbjct: 121 VEQYLEDGVRAGTVKPSADPRARAFFLSMASGGGFLLYLQLHES-TDIRVVLRDYSEAMV 179

Query: 180 LPSLEIYTEGLMADSTMYDAFLAQDNQGESHGH 212
           LP+LE+YT GL+ DSTMYDAF+A+     +H H
Sbjct: 180 LPALELYTHGLLTDSTMYDAFVAE----RAHDH 208


>tr|B1MLL9|B1MLL9_MYCA9 Tax_Id=561007 SubName: Full=Probable
           transcriptional regulator, TetR family;[Mycobacterium
           abscessus]
          Length = 214

 Score =  230 bits (587), Expect = 7e-59
 Identities = 116/212 (54%), Positives = 156/212 (73%), Gaps = 2/212 (0%)

Query: 1   MRSVD-LTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDN 59
           MRS D LTAAARIRDAAI+ +G+ G G S+RAIA+ AGVS ALVIHH+GSK+GLR+A D+
Sbjct: 1   MRSADDLTAAARIRDAAIKLWGEQGNGASVRAIADAAGVSPALVIHHYGSKDGLRQAVDD 60

Query: 60  YVAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDN 119
           Y+   IRSEK   + SNDP  WL  + ++E++AP++ YL+ S+QSGGE      ++ ID+
Sbjct: 61  YLLAYIRSEKSRTITSNDPQVWLDAIDEIETFAPMVRYLLHSVQSGGEPGRAFLRRSIDD 120

Query: 120 AEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDML 179
           AE+YL  GVRAGTIK SRDPK RA ++++   G  ++Y+QMH    DLR +LR YA +++
Sbjct: 121 AEQYLEDGVRAGTIKPSRDPKGRALWVSLNSVGSLIIYVQMHAN-EDLREILRRYADELI 179

Query: 180 LPSLEIYTEGLMADSTMYDAFLAQDNQGESHG 211
            P++E+YTEGLM DSTM DAF  Q ++  S G
Sbjct: 180 FPAIEVYTEGLMTDSTMLDAFAVQQDKSHSKG 211


>tr|A1T4Y0|A1T4Y0_MYCVP Tax_Id=350058 SubName: Full=Transcriptional
           regulator, TetR family;[Mycobacterium vanbaalenii]
          Length = 247

 Score =  226 bits (577), Expect = 1e-57
 Identities = 119/204 (58%), Positives = 147/204 (72%), Gaps = 3/204 (1%)

Query: 10  ARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEEIRSEK 69
           A+IRDAAI + G  GF   +RAIA  AG+SA +VI  +GSK  L KACD++V E IR+ K
Sbjct: 22  AQIRDAAIAKIGAQGFRTPIRAIAAAAGLSADVVIDLYGSKRNLLKACDDHVVETIRTSK 81

Query: 70  LTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEYLAVGVR 129
             A+QS DPATW   LA +ESYAPLMAYLVRS++ G  LA  L  +MI+N  +YL  GVR
Sbjct: 82  SQALQSRDPATWRAALAGIESYAPLMAYLVRSIEDGQSLADGLLDRMIENVIDYLDDGVR 141

Query: 130 AGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLLPSLEIYTEG 189
           AGT+K SR+P+ARAKFLA++ AGGFLLY   H TP D+ AVLRDYA DM+ P+LE+Y+ G
Sbjct: 142 AGTVKPSRNPRARAKFLALSNAGGFLLYRHRHPTPRDMAAVLRDYAADMIEPALELYSSG 201

Query: 190 LMADSTMYDAF---LAQDNQGESH 210
           LMAD+TM DA    LA+   G  H
Sbjct: 202 LMADTTMLDALAEPLARQRNGAHH 225


>tr|Q0SCH5|Q0SCH5_RHOSR Tax_Id=101510 SubName: Full=Possible
           transcriptional regulator, TetR family
           protein;[Rhodococcus sp.]
          Length = 234

 Score =  216 bits (550), Expect = 1e-54
 Identities = 108/210 (51%), Positives = 145/210 (69%), Gaps = 3/210 (1%)

Query: 5   DLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEE 64
           DLT  AR+RDAAI  FG HGF   +RAIA  AGVS  LVIHHFGSK+GLR  CD +V   
Sbjct: 14  DLTTRARVRDAAITVFGNHGFSTGVRAIATAAGVSPGLVIHHFGSKDGLRAECDEHVLRI 73

Query: 65  IRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEYL 124
           IR +K  A+ +  PA  +  LA++E YAPL+AY+VRS Q+GG L   L++ M+++ E+YL
Sbjct: 74  IREQKAEAISTPGPAGAMHALAEIEQYAPLVAYIVRSFQAGGGLGESLFEHMVEDTEQYL 133

Query: 125 AVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMH---QTPTDLRAVLRDYARDMLLP 181
           A+GV AGT++ SR+PKARA++L +   G  LLYLQM    +TP D    +RD A D+ LP
Sbjct: 134 AMGVAAGTVRPSRNPKARARYLTLYNVGAMLLYLQMRADKETPLDYATAIRDLATDVTLP 193

Query: 182 SLEIYTEGLMADSTMYDAFLAQDNQGESHG 211
           +LE+YTEGL+ DS+  +A+LA ++     G
Sbjct: 194 ALEMYTEGLLPDSSTLEAYLATEDGAAQAG 223


>tr|C1B500|C1B500_RHOOB Tax_Id=632772 SubName: Full=Putative TetR
           family transcriptional regulator;[Rhodococcus opacus]
          Length = 234

 Score =  213 bits (541), Expect = 1e-53
 Identities = 106/210 (50%), Positives = 143/210 (68%), Gaps = 3/210 (1%)

Query: 5   DLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEE 64
           D+T  AR+RDAAI  FG HGFG  +RAIA  AGVS  LVIHHFGSK+GLR  CD +V   
Sbjct: 14  DMTTRARVRDAAITVFGNHGFGTGVRAIATAAGVSPGLVIHHFGSKDGLRAECDEHVLRI 73

Query: 65  IRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEYL 124
           IR +K  A+ +  PA  +  LA +E YAPL+AY+VRS Q+GG L   L++ M+++ E+YL
Sbjct: 74  IREQKAEAISTPGPAGAMQALADIEQYAPLVAYIVRSFQAGGGLGESLFEHMVEDTEQYL 133

Query: 125 AVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMH---QTPTDLRAVLRDYARDMLLP 181
           A+GV AG ++ SR+PKARA++L +   G  LLYLQM    + P D    +RD A D+ LP
Sbjct: 134 ALGVAAGRVRPSRNPKARARYLTLYNVGAMLLYLQMRADKEAPLDYATAIRDLATDVTLP 193

Query: 182 SLEIYTEGLMADSTMYDAFLAQDNQGESHG 211
           +LE+YTEGL+ DS+  +A+LA ++     G
Sbjct: 194 ALEMYTEGLLPDSSTLEAYLATEDGAAQAG 223


>tr|C1YU62|C1YU62_NOCDA Tax_Id=446468 SubName: Full=Transcriptional
           regulator, TetR family;[Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 224

 Score =  207 bits (526), Expect = 8e-52
 Identities = 107/199 (53%), Positives = 142/199 (71%), Gaps = 2/199 (1%)

Query: 5   DLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEE 64
           DLTA ARIRDAAI  FGQ GFGVS+RAIAE AGVS  LVIHHFGSK+ LR+ACD++V   
Sbjct: 15  DLTARARIRDAAIACFGQRGFGVSVRAIAEQAGVSPGLVIHHFGSKDKLRRACDDHVTAA 74

Query: 65  IRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEYL 124
           +   K   + S+D  T+L QLA +E YAPL+AY+VRSMQ+GG LA  L+++M+ + E YL
Sbjct: 75  VNEVKTDTVTSHDGQTFLHQLATMEQYAPLLAYVVRSMQAGGPLAAALFERMVADIEVYL 134

Query: 125 AVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQ--TPTDLRAVLRDYARDMLLPS 182
           A G   GTI+ SRDP  RA++LA    G  LL+L + +     D   V R+++R+ +LP+
Sbjct: 135 AAGEAEGTIRPSRDPARRARYLAANSLGSLLLFLTLGRFGEEVDFARVAREWSREYMLPT 194

Query: 183 LEIYTEGLMADSTMYDAFL 201
           LE+YTEGL+ + T+ DA+L
Sbjct: 195 LELYTEGLLTERTILDAYL 213


>tr|C1RI82|C1RI82_9CELL Tax_Id=446466 SubName: Full=Transcriptional
           regulator, TetR family;[Cellulomonas flavigena DSM
           20109]
          Length = 224

 Score =  189 bits (481), Expect = 1e-46
 Identities = 98/199 (49%), Positives = 133/199 (66%), Gaps = 2/199 (1%)

Query: 5   DLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEE 64
           DLT  ARIRDAA+ ++ + GFG  LRA+AE AGVSAAL++HHFGSK+GLR+ CD YV   
Sbjct: 10  DLTTRARIRDAAVARYAREGFGAPLRAVAEDAGVSAALIVHHFGSKDGLRQVCDAYVLAT 69

Query: 65  IRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEYL 124
           IR  K  A+ S      L QLA ++ YAPL+ Y +RS+Q+GG +A    +  + +AE YL
Sbjct: 70  IRESKERAIASGTTQEVLLQLASLDEYAPLVGYALRSLQAGGAMARDFVEHFVADAEVYL 129

Query: 125 AVGVRAGTIKASRDPKARAKFLAITGAGGFLL--YLQMHQTPTDLRAVLRDYARDMLLPS 182
           A  V  G ++ SRD KARA++L + G G  LL   L +   PTD+ A+L  Y   M+LP+
Sbjct: 130 AEAVATGQMRPSRDEKARARYLTVQGLGTLLLDMTLNVPDDPTDVLAMLHGYRDRMMLPA 189

Query: 183 LEIYTEGLMADSTMYDAFL 201
           +E++T GLM D+TM DA+L
Sbjct: 190 VELFTHGLMTDNTMLDAYL 208


>tr|Q5YWW6|Q5YWW6_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 217

 Score =  189 bits (479), Expect = 2e-46
 Identities = 99/198 (50%), Positives = 134/198 (67%), Gaps = 4/198 (2%)

Query: 5   DLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEE 64
           +LT AARIRDAAIE FG  GF V +R IA  AGVS  LV HHFGSK+GLR ACD  V + 
Sbjct: 14  ELTTAARIRDAAIEVFGDRGFDVGVRVIAAAAGVSPGLVNHHFGSKDGLRAACDERVLQL 73

Query: 65  IRSEKLTAMQSNDP-ATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEY 123
           I  EK  A+ + D  A  L  +A+VE+Y PL+AY+VRS+++GG +A  L++ M+ +AE+Y
Sbjct: 74  IHDEKTKALLAPDTGAGLLAAMAEVEAYGPLVAYMVRSLEAGGPMAESLFEHMVADAEDY 133

Query: 124 LAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQ---TPTDLRAVLRDYARDMLL 180
           +  GV AG IK SRDPKARA+ L +   G  LL++++HQ      D RA +R    ++  
Sbjct: 134 MRRGVEAGVIKPSRDPKARARHLMLANVGATLLWVRLHQRDGETIDFRAAIRRITEELTG 193

Query: 181 PSLEIYTEGLMADSTMYD 198
           P+LE+YT+GL+ D T+ D
Sbjct: 194 PALELYTQGLLTDPTLLD 211


>tr|C1WSQ8|C1WSQ8_9ACTO Tax_Id=479435 SubName: Full=Transcriptional
           regulator, TetR family;[Kribbella flavida DSM 17836]
          Length = 223

 Score =  186 bits (473), Expect = 1e-45
 Identities = 97/201 (48%), Positives = 132/201 (65%), Gaps = 2/201 (0%)

Query: 3   SVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVA 62
           S +  +  RIRDAAI +FG+ GF   LR IA  AGV+A LV+HHFGSK GLR+ACD +V 
Sbjct: 10  SAEAASVERIRDAAIVRFGRDGFSAGLRVIAADAGVTAGLVVHHFGSKGGLRQACDEHVL 69

Query: 63  EEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEE 122
             IR+EKL A  +   A  + QLA+VE +AP+  Y VRS+Q+GG LA    +QM+ +AE+
Sbjct: 70  SVIRAEKLKAATTGSAAGMIAQLAEVEQFAPMALYAVRSLQTGGRLATEFVEQMVRDAEQ 129

Query: 123 YLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLY--LQMHQTPTDLRAVLRDYARDMLL 180
           YLA GV AG IK SRDP ARA++LA    G  LL+  ++      D  A LR+ + ++  
Sbjct: 130 YLAAGVEAGVIKPSRDPAARARYLAYQSLGSLLLWATIRSDALTGDFAAALRELSDEVTP 189

Query: 181 PSLEIYTEGLMADSTMYDAFL 201
           P+LE++T+GL  D +M D +L
Sbjct: 190 PALELFTQGLFVDRSMLDDYL 210


>tr|C5BXC6|C5BXC6_BEUC1 Tax_Id=471853 SubName: Full=Transcriptional
           regulator, TetR family;[Beutenbergia cavernae]
          Length = 254

 Score =  157 bits (396), Expect = 9e-37
 Identities = 87/199 (43%), Positives = 115/199 (57%), Gaps = 2/199 (1%)

Query: 5   DLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEE 64
           DLTA ARIRD AI  FG+HGFGV LRAIA+ AGVS  LV HHFGSK+GLR+ACD +V   
Sbjct: 21  DLTARARIRDGAIRLFGEHGFGVGLRAIAQEAGVSVGLVAHHFGSKDGLREACDAHVLSA 80

Query: 65  IRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEYL 124
           +   +  A  S      + QLA V  +APL+AY+ RS+Q+GG+LA    +    +A  +L
Sbjct: 81  LNEARRAADVSGPSGAMITQLAAVAEFAPLVAYVFRSVQAGGQLARDFVEHAAADAAAFL 140

Query: 125 AVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQ--TPTDLRAVLRDYARDMLLPS 182
                +G ++ SRD  ARA+ L     G   L L +        +   +  Y      P 
Sbjct: 141 ERSAASGLVRPSRDEVARARALTSQSIGSLALELALDPPGPGESMSEAIERYVERYTAPL 200

Query: 183 LEIYTEGLMADSTMYDAFL 201
           LE+YT+GL  DS+M DA+L
Sbjct: 201 LELYTDGLFTDSSMLDAYL 219


>tr|C7MD23|C7MD23_BRAFD Tax_Id=446465 SubName: Full=Transcriptional
           regulator, tetR family;[Brachybacterium faecium]
          Length = 219

 Score =  138 bits (348), Expect = 3e-31
 Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 4/205 (1%)

Query: 8   AAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEEIRS 67
           A  RI  AA+++F   G    LRA+A+ AGVSA L+IHH+GS+E L +ACD    +  R 
Sbjct: 7   ADERILRAALQRFAVEGLRAPLRAVAQDAGVSAGLIIHHYGSREKLLEACDRRALQITRE 66

Query: 68  EKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEYLAVG 127
            K   +     A  L QLA++  +AP++ Y++R +Q+GG LA  L    + +A  YLA G
Sbjct: 67  NKREVLTGGS-AAMLAQLAEIARFAPVVGYVLRRLQAGGPLAQQLVGDFVADALVYLAEG 125

Query: 128 VRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAV---LRDYARDMLLPSLE 184
             AG I  SRDP+ARA+ L     G  +L +   +   DL  +   LR +   ++ P LE
Sbjct: 126 EAAGLISTSRDPEARARVLTEMALGALVLQMPSQRDRLDLVGLPTWLRSFTDSLVAPVLE 185

Query: 185 IYTEGLMADSTMYDAFLAQDNQGES 209
           +YT  L+ D+++ DA+LA    G++
Sbjct: 186 LYTTPLLTDASLLDAYLAAAPPGDA 210


>tr|C8XGG5|C8XGG5_NAKMY Tax_Id=479431 SubName: Full=Transcriptional
           regulator, TetR family;[Nakamurella multipartita]
          Length = 232

 Score =  137 bits (344), Expect = 1e-30
 Identities = 79/202 (39%), Positives = 122/202 (60%), Gaps = 5/202 (2%)

Query: 3   SVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVA 62
           + DLTA A++RDAAI  F + GF  S R IA  AGVS  L+ HHFGSKE LR  CD  V 
Sbjct: 12  AADLTARAKVRDAAIAAFAEQGFDASFRVIAARAGVSPGLITHHFGSKEQLRAECDAEVL 71

Query: 63  EEIRSEKLTAMQSNDPATWLGQ-LAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAE 121
            + R+ K +++   +P+ +L Q LA+    A L  Y++R++ +GG  A    + +ID A 
Sbjct: 72  RQYRALKSSSIA--NPSGYLFQHLAEPGPAAQLTVYMLRAIHAGGRPAQDFLEHLIDGAR 129

Query: 122 EYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLL-YLQM-HQTPTDLRAVLRDYARDML 179
           E +A  V AG ++ SRD +AR ++LA    G  L+ +L M   +P      +R+  ++ +
Sbjct: 130 EVMAASVAAGLVRPSRDEEARTRYLAFQTMGAMLIQFLTMPDPSPEAFVESIRNSRQNQI 189

Query: 180 LPSLEIYTEGLMADSTMYDAFL 201
           LP+LE++T+GL+ D +M + +L
Sbjct: 190 LPTLELFTDGLLVDRSMLEDYL 211


>tr|C5C3T9|C5C3T9_BEUC1 Tax_Id=471853 SubName: Full=Transcriptional
           regulator, TetR family;[Beutenbergia cavernae]
          Length = 252

 Score =  134 bits (337), Expect = 6e-30
 Identities = 84/213 (39%), Positives = 117/213 (54%), Gaps = 4/213 (1%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNY 60
           +R  DLTA ARIRDAAIE F + GF  S+R +A+ AGVSA L+ HHFGSK  LR  CD  
Sbjct: 21  VRPEDLTARARIRDAAIECFARDGFDASVRTLADRAGVSAGLITHHFGSKAKLRAECDTE 80

Query: 61  VAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNA 120
           V    R  K  A++   P   L  LA     A L+ Y++R++ +GG  A      ++D+A
Sbjct: 81  VLRRYRLVKQDAVERPTPHL-LEALADPGPDAALLVYILRAVHAGGPAARAFLTHLMDDA 139

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLL--YLQMHQTPTDLRAVLRDYARDM 178
            + +A GV  G ++ SRD +AR ++L     G  L+   L     P    A +R  + D+
Sbjct: 140 RDAMADGVARGLVRPSRDEEARLRYLTYQTVGAMLVDFMLDGGSDPGVFVARMRQRSSDL 199

Query: 179 LLPSLEIYTEGLMADSTMYDAFLAQDNQGESHG 211
           LLP LE+ TEG +A     D++L    +G  HG
Sbjct: 200 LLPMLEVGTEGYLASREYLDSYLENVWEGR-HG 231


>tr|D1BU20|D1BU20_9MICO Tax_Id=446471 SubName: Full=Transcriptional
           regulator, TetR family;[Xylanimonas cellulosilytica DSM
           15894]
          Length = 233

 Score =  132 bits (333), Expect = 2e-29
 Identities = 82/206 (39%), Positives = 113/206 (54%), Gaps = 13/206 (6%)

Query: 1   MRSVD-LTAAARIRDAAIEQFGQHGFGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDN 59
           MRSV+ L+  +RIRDAA+ +F + GF V LR IA  AGVS ALVIHHFGSK+GLR ACD 
Sbjct: 1   MRSVEELSTRSRIRDAAVSRFARDGFRVPLRVIAADAGVSPALVIHHFGSKDGLRAACDE 60

Query: 60  YVAEEIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDN 119
           +V E     K   +++ DPA     L  +  +   +AYL+R++  GGE A  + ++ +  
Sbjct: 61  HVLEHSLMLKSGVVENTDPALLRSLLGNLRVFDEPVAYLLRALLDGGEAARSILERTVAA 120

Query: 120 AEEYLAVGVRAGTIKASRDPKARAKFLAITGAG----GFLLYLQMHQTPTDLRAV----- 170
            E YL  GV +G I+ SRDP  RA++L     G     FL   +      D  A      
Sbjct: 121 VETYLEAGVASGVIRPSRDPAGRARYLTYMSLGLLVTAFLAGPRTDGDDDDGAASDEGDP 180

Query: 171 ---LRDYARDMLLPSLEIYTEGLMAD 193
              + +    + LP LE+ T GL+AD
Sbjct: 181 YGHVTELLASLTLPHLEVMTHGLIAD 206


>tr|B2HQ22|B2HQ22_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulator;[Mycobacterium marinum]
          Length = 215

 Score =  117 bits (293), Expect = 8e-25
 Identities = 79/211 (37%), Positives = 111/211 (52%), Gaps = 15/211 (7%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHGFG-VSLRAIAEGAGVSAALVIHHFGSKEGLRKACDN 59
           M S DLTA ARIR+AA+ +F + GF  V+LRAIA  AGVS AL+ HHFGSK+GLR ACD 
Sbjct: 1   MCSADLTAKARIRNAAVARFARDGFQKVNLRAIATSAGVSEALIFHHFGSKDGLRAACDE 60

Query: 60  YVAEEIRSEKLTAMQSNDPATWLG-QLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMID 118
           YV   +     TA +    A  LG  L+  E Y   + Y+ R+++     A      M++
Sbjct: 61  YVLNVLVGRARTAGRPTAMADLLGVYLSNPEEYRLQVQYMARAIEDDAPAAGTFVDTMVE 120

Query: 119 NAEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDY---- 174
            +E     G   G+++ S DP+A A    +   G       +   P   RA+  ++    
Sbjct: 121 ESEAIFRAGAADGSMRPSSDPRALAVLNLLVALG------LLTMAPPMARALGHEHFGPE 174

Query: 175 -ARDMLLPSLEIYTEGLMADSTMYDAFLAQD 204
             + M +P+LE+YT GL  D T+  A  AQD
Sbjct: 175 VLQRMAVPALELYTRGLYTDDTLAKA--AQD 203


>tr|A4X948|A4X948_SALTO Tax_Id=369723 SubName: Full=Regulatory
           protein, TetR;[Salinispora tropica]
          Length = 205

 Score =  101 bits (251), Expect = 6e-20
 Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 2/149 (1%)

Query: 10  ARIRDAAIEQFGQHGFGVS-LRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEEIRSE 68
           +RIRDAAI  F   G   + +RAIA  AGV  +L+IH+FG+K+GLR ACD +VA  +R  
Sbjct: 19  SRIRDAAITLFADQGVAATGVRAIAAAAGVHPSLIIHYFGTKDGLRVACDKHVAAFVREH 78

Query: 69  KLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEYLAVGV 128
           K   M+S      + +L  +    PLM YL R++  G      L  +M+++A +YL+ GV
Sbjct: 79  KQNVMRSAGRFD-VAELRDLGEGPPLMRYLARTLVDGSPHTAALVDEMVNDAVDYLSEGV 137

Query: 129 RAGTIKASRDPKARAKFLAITGAGGFLLY 157
            +G ++ +  P  RA  LAI   G   L+
Sbjct: 138 ASGLVRPTEHPYERAALLAIWSLGALALH 166


>tr|A8LV03|A8LV03_SALAI Tax_Id=391037 SubName: Full=Transcriptional
           regulator, TetR family;[Salinispora arenicola]
          Length = 211

 Score =  100 bits (249), Expect = 1e-19
 Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 2/149 (1%)

Query: 10  ARIRDAAIEQFGQHGFGVS-LRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAEEIRSE 68
           +RIRDAAI  F ++G   + +RAIA  AGV  +L+IH+FG+K+ LR ACD YVA  +R  
Sbjct: 25  SRIRDAAITLFAENGVAATGVRAIASAAGVHPSLIIHYFGTKDALRVACDKYVAGFVREY 84

Query: 69  KLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEYLAVGV 128
           K   M+S         L  +    PLM YL R++  G      L  +M+++A EYL+ GV
Sbjct: 85  KHKVMRSGMKFD-AADLRDLRDGPPLMRYLARTLADGSPHTAALVDEMVNDAVEYLSEGV 143

Query: 129 RAGTIKASRDPKARAKFLAITGAGGFLLY 157
            +G ++ +  P  RA  LA+   G   L+
Sbjct: 144 ASGLVRPTDHPYERAAILAVWSLGALALH 172


>tr|A4AIQ4|A4AIQ4_9ACTN Tax_Id=312284 SubName: Full=Probable
           transcriptional regulatory protein;[marine
           actinobacterium PHSC20C1]
          Length = 224

 Score =  100 bits (249), Expect = 1e-19
 Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 6/203 (2%)

Query: 1   MRSV--DLTAAARIRDAAIEQFGQHGFGV-SLRAIAEGAGVSAALVIHHFGSKEGLRKAC 57
           MRS   D T  ARIRDAAI   G++GF   S RA+A  AGVSA LVIHHFGS   L+ +C
Sbjct: 1   MRSTLDDSTTRARIRDAAILLIGRNGFAATSARAVAAQAGVSAGLVIHHFGSMRELKNSC 60

Query: 58  DNYVAEEIRSEKLTAMQSNDPATWLGQ-LAQVESYAPLMAYLVRSMQSGGELAMMLWQQM 116
           D+++  EI   K T M ++D    + +  A ++ Y P ++YL R      E    L+ + 
Sbjct: 61  DDFIIAEIAQRK-TGMGADDVNAAVQEWYADLDRYQPWLSYLGRLFTDDSEAGADLFDRF 119

Query: 117 IDNAEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYAR 176
           +  +   L  GV    ++ S D  ARA  L        +L   + ++    +  L   +R
Sbjct: 120 VVMSRSMLDDGVAHDQVRPSADEHARAVLLVTHSLSSVILQGHIARSLGSQKLSLASLSR 179

Query: 177 DMLLPSLEIYTEGLMADSTMYDA 199
            M   +LE+YTEG+  +S++ DA
Sbjct: 180 -MGNAALEVYTEGIYLNSSVLDA 201


>tr|A9WQM4|A9WQM4_RENSM Tax_Id=288705 SubName: Full=Transcriptional
           regulator, TetR family;[Renibacterium salmoninarum]
          Length = 274

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 70/206 (33%), Positives = 90/206 (43%), Gaps = 21/206 (10%)

Query: 5   DLTAAARIRDAAIEQFGQHGFG-VSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           DL   A+IRDAAI  F Q GF   S+R IA  AGVS  LVIHHFGSK+ LR  CD+YV  
Sbjct: 62  DLNTPAKIRDAAIHLFVQGGFRKTSVRGIASAAGVSPGLVIHHFGSKDKLRAICDDYVLS 121

Query: 64  EIRSEKLTAMQSNDPATWLG----QLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDN 119
            + +    A    +PA   G     LA    Y   + YL +++             M D 
Sbjct: 122 ALLAR---ANAKTNPAGLQGLIREYLADPAEYNDSVGYLGKAIAEDSPAGRKFMDIMTDE 178

Query: 120 AEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVL------RD 173
            E  L  G+  GT++   D +  A  L +T        + M   P  L   L       D
Sbjct: 179 TEAILKAGMADGTMREISDVRVTAAMLVMTS-------MSMLTMPAYLGRALGFDEFSPD 231

Query: 174 YARDMLLPSLEIYTEGLMADSTMYDA 199
             + M  P LE+YT GL  +     A
Sbjct: 232 MMKRMSRPMLELYTYGLYTNDVFLQA 257


>tr|C7QAH3|C7QAH3_CATAD Tax_Id=479433 SubName: Full=Transcriptional
           regulator, TetR family;[Catenulispora acidiphila]
          Length = 214

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 78/217 (35%), Positives = 104/217 (47%), Gaps = 25/217 (11%)

Query: 1   MRSV--DLTAAARIRDAAIEQFGQHG-FGVSLRAIAEGAGVSAALVIHHFGSKEGLRKAC 57
           MRS+  D TA A IRD A+  F  HG   VS+R IA  AGVSAALV+HHFGSKEGLR   
Sbjct: 1   MRSIKDDRTARAVIRDEALALFAAHGPDAVSVRQIATAAGVSAALVVHHFGSKEGLRDVV 60

Query: 58  DNYVAEEIRSEKLTAMQSN------DPATWLGQLAQ-----VESYAPLMAYLVRSMQSGG 106
           D +V E      LT M         DPA   G L +     + + +P+ AYL R + +  
Sbjct: 61  DRHVLETF-DGMLTEMTGEGAPDLYDPAA-TGSLVEAVLQHLPADSPMPAYLRRMLLTDS 118

Query: 107 ELAMMLWQQMIDNAEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMHQT--- 163
           E    L+ ++   ++  LA    AG      DP  RA FL        LL  ++ +    
Sbjct: 119 EAGKELFAKLFAVSQGMLAALSEAGMAAPGADPAVRAAFLMANDLAVLLLRDRLTEVLGV 178

Query: 164 -PTDLRAVLRDYARDMLLPSLEIYTEGLMADSTMYDA 199
            P     + R +A +M    L +Y  GL AD  + +A
Sbjct: 179 DPLSQEGMAR-WASEM----LAVYASGLQADPQLPEA 210


>tr|B1MMP2|B1MMP2_MYCA9 Tax_Id=561007 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium abscessus]
          Length = 208

 Score = 89.0 bits (219), Expect = 3e-16
 Identities = 61/160 (38%), Positives = 88/160 (55%), Gaps = 10/160 (6%)

Query: 5   DLTAAARIRDAAIEQFGQHGF-GVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           DLTA ARIRDAA+ +FG  G+ G ++R IA  AGVS+ L+ HHFGSK+ LR ACD Y+ +
Sbjct: 8   DLTARARIRDAALREFGDKGYDGATIRGIAARAGVSSGLLRHHFGSKQELRDACDEYLVK 67

Query: 64  EIR--SEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAE 121
            +R  +E++ A        ++     V  Y    AY+ R++  G   A  L+ +M+   E
Sbjct: 68  TMRDINEQVQANVERGDVHYVSARIPVGQY---QAYITRALVEGS--AGQLFDEMVAMTE 122

Query: 122 EYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLLYLQMH 161
            +LAV  +     A+ D K+RA    IT     +  LQ H
Sbjct: 123 GWLAVADQNRAYPAAVDVKSRA--AVITAMALAVPLLQQH 160


>tr|C4EI42|C4EI42_STRRS Tax_Id=479432 SubName: Full=Transcriptional
           regulator, TetR family;[Streptosporangium roseum DSM
           43021]
          Length = 221

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 58/142 (40%), Positives = 82/142 (57%), Gaps = 7/142 (4%)

Query: 5   DLTAAARIRDAAIEQFGQHGFG-VSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           DLTA ARIRDAA+  F + GF   ++R IAE AGVS+ LV HHFGSK+ LR+ACD ++ +
Sbjct: 12  DLTARARIRDAAMRHFAEQGFERATIRGIAETAGVSSGLVRHHFGSKQALREACDAHLTK 71

Query: 64  EIR--SEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAE 121
            IR  ++++ +  + D A  +     V   AP   YL R++  G   A  ++ QM++  E
Sbjct: 72  VIRRLNDEVRSGHALDKANPVATANTV--MAPYQGYLARALAEGS--AEAVFDQMVELTE 127

Query: 122 EYLAVGVRAGTIKASRDPKARA 143
           E+LA            D KARA
Sbjct: 128 EWLADADERRPDVPDVDRKARA 149


>tr|Q73V01|Q73V01_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 230

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 59/146 (40%), Positives = 85/146 (58%), Gaps = 10/146 (6%)

Query: 5   DLTAAARIRDAAIEQFGQHGF-GVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           DLTA ARIR AA+ +FG+ G+ G ++R+IA  AGVS+ L+ HHFGSK+ LR+ACD+Y+ +
Sbjct: 8   DLTARARIRHAALREFGEKGYEGATIRSIAAAAGVSSGLLRHHFGSKQELRQACDDYLVK 67

Query: 64  EIRSEKLTAMQSNDPATWLGQLAQVESYAPL---MAYLVRSMQSGGELAMMLWQQMIDNA 120
            +R   L A Q  D A   G +  V +  PL     Y+ R++  GG  A  L+  ++   
Sbjct: 68  TMRD--LNA-QVQDNAK-RGDVHYVSARIPLGQHQDYITRALVEGG--AGELFDALVSMT 121

Query: 121 EEYLAVGVRAGTIKASRDPKARAKFL 146
           EE+LA         A  D K+RA  +
Sbjct: 122 EEWLASADEHRAEPADVDAKSRATLI 147


>tr|C4DS13|C4DS13_9ACTO Tax_Id=446470 SubName: Full=Transcriptional
           regulator, TetR family;[Stackebrandtia nassauensis DSM
           44728]
          Length = 215

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 7/123 (5%)

Query: 5   DLTAAARIRDAAIEQFGQHGFG-VSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           DLTA ARIRDAA+  FG+ GF   ++R IAE AGVS+ L+ HH+GSKE LR ACD Y+AE
Sbjct: 8   DLTARARIRDAALRHFGEQGFDRATIRGIAEIAGVSSGLLRHHYGSKEELRDACDAYLAE 67

Query: 64  EIR--SEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAE 121
            +   ++++ A  ++D   ++       ++ P   YL R++  G   A  ++ +M++   
Sbjct: 68  TLAELNDRVRAADASDGVNYVAVAG--AAFGPYQKYLSRALAEG--RAQPIFDKMVELGG 123

Query: 122 EYL 124
           ++L
Sbjct: 124 QWL 126


>tr|A0QJW1|A0QJW1_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator, TetR family protein;[Mycobacterium avium]
          Length = 230

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 4/143 (2%)

Query: 5   DLTAAARIRDAAIEQFGQHGF-GVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           DLTA ARIR AA+ +FG+ G+ G ++R+IA  AGVS+ L+ HHFGSK+ LR+ACD+Y+ +
Sbjct: 8   DLTARARIRHAALREFGEKGYEGATIRSIAAAAGVSSGLLRHHFGSKQELRQACDDYLVK 67

Query: 64  EIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEY 123
            +R +    +Q N     +  ++          Y+ R++  GG  A  L+  ++   EE+
Sbjct: 68  TMR-DLNAQVQDNAKRGDVHYVSARIRLGQYQDYITRALVEGG--AGELFDALVSMTEEW 124

Query: 124 LAVGVRAGTIKASRDPKARAKFL 146
           LA         A  D K+RA  +
Sbjct: 125 LASADEHRAEPADVDAKSRATLI 147


>tr|C8X7L5|C8X7L5_NAKMY Tax_Id=479431 SubName: Full=Transcriptional
           regulator, TetR family;[Nakamurella multipartita]
          Length = 214

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 62/164 (37%), Positives = 90/164 (54%), Gaps = 9/164 (5%)

Query: 1   MRSV-DLTAAARIRDAAIEQFGQHGFG-VSLRAIAEGAGVSAALVIHHFGSKEGLRKACD 58
           MR+V DLT AA IR++A+      G+  VS+R IA  AGVS++LV+HHFG+K  LR+A D
Sbjct: 7   MRAVADLTGAALIRESAMRLTADRGWAAVSIRDIAADAGVSSSLVVHHFGTKARLREAVD 66

Query: 59  NYVAEEIRSEKLTAMQSNDPAT--WLGQLA----QVESYAPLMAYLVRSMQSGGELAMML 112
             V  E+ ++ L  M  +D  +  ++   A    QV +   L++YL R +  GG  A  L
Sbjct: 67  ARVT-EVLADLLGRMGDSDALSGEYMSIAAAFHDQVGADGVLLSYLRRLLIDGGPAATAL 125

Query: 113 WQQMIDNAEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLL 156
           +  + D     LA    AG ++ + DP ARA FL +      LL
Sbjct: 126 FGSLYDMTLASLAGLESAGVVRPTADPPARAAFLLVNDLAVVLL 169


>tr|A0PNV2|A0PNV2_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulator;[Mycobacterium ulcerans]
          Length = 204

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 58/155 (37%), Positives = 78/155 (50%), Gaps = 12/155 (7%)

Query: 5   DLTAAARIRDAAIEQFGQHG-FGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           D TA ARIRD A+  F + G   V++R IA  AGVS AL+I H+GSK+GL +A DN+V  
Sbjct: 7   DRTARARIRDEALRLFAERGPDAVTMRDIATAAGVSPALLIRHYGSKDGLIEAVDNHVI- 65

Query: 64  EIRSEKLTAMQSNDPATWLGQLA----------QVESYAPLMAYLVRSMQSGGELAMMLW 113
            I    LT       A  LGQ A           +   + + AYL R + SGG     L+
Sbjct: 66  AIFEVLLTEATRETEAVGLGQAAVGGLLDGLATHLPPDSAVPAYLSRMLISGGTAGPGLF 125

Query: 114 QQMIDNAEEYLAVGVRAGTIKASRDPKARAKFLAI 148
            ++   +++ L     AGT     DP  RA FL +
Sbjct: 126 ARLFRLSQDTLNAMAAAGTASPGADPAVRAAFLLV 160


>tr|Q0RJZ3|Q0RJZ3_FRAAA Tax_Id=326424 SubName: Full=Putative
           HTH-type transcriptional regulator;[Frankia alni]
          Length = 210

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 57/158 (36%), Positives = 80/158 (50%), Gaps = 6/158 (3%)

Query: 5   DLTAAARIRDAAIEQFGQHGF-GVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           DLTA ARIR AA     + G    ++R IA+ AGVS ALVIHHFGSK+G+  A   ++ E
Sbjct: 10  DLTAKARIRAAAFALVAERGVHSTTVRGIAQRAGVSPALVIHHFGSKQGVIDAISTWIVE 69

Query: 64  EIRSEKLTAMQSNDPATWLG----QLAQVESYAPLMAYLVRSMQSGGELAMMLW-QQMID 118
            +        +  DPA  L     +  ++ +  PL+   VR M   G+   + W ++ +D
Sbjct: 70  YLHRNTREPDRGGDPAQALQRRLVRFERMVAEVPLLGAYVRRMLLDGQPDGLDWFRRAVD 129

Query: 119 NAEEYLAVGVRAGTIKASRDPKARAKFLAITGAGGFLL 156
            + E LA   R G  + S D +A A  L I G    LL
Sbjct: 130 LSAEELAHRERMGKARPSTDLRAEAAMLFILGFAPVLL 167


>tr|B2HPE2|B2HPE2_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulator;[Mycobacterium marinum]
          Length = 204

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 56/158 (35%), Positives = 80/158 (50%), Gaps = 10/158 (6%)

Query: 1   MRSVDLTAAARIRDAAIEQFGQHG-FGVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDN 59
           + S D TA ARIRD A+  F + G   V++R IA  AGVS AL+I H+GSK+GL +A DN
Sbjct: 3   LASDDRTARARIRDEALRLFAERGPDAVTMRDIATAAGVSPALLIRHYGSKDGLVEAVDN 62

Query: 60  YV--------AEEIRSEKLTAMQSNDPATWL-GQLAQVESYAPLMAYLVRSMQSGGELAM 110
           +V         E  R  +   +        L G  A +   + + AYL R + +GG    
Sbjct: 63  HVIAIFEVLLTEATRETEAVGLSQAAVGGLLDGLAAHLPPDSAVPAYLSRMLITGGTAGP 122

Query: 111 MLWQQMIDNAEEYLAVGVRAGTIKASRDPKARAKFLAI 148
            L+ ++   +++ L   V AGT     DP  RA FL +
Sbjct: 123 GLFARLFRLSQDTLNAMVAAGTASPGADPAVRAAFLLV 160


>tr|C1YWJ8|C1YWJ8_NOCDA Tax_Id=446468 SubName: Full=Transcriptional
           regulator, TetR family;[Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 221

 Score = 77.8 bits (190), Expect = 7e-13
 Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 5   DLTAAARIRDAAIEQFGQHGF-GVSLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           DLT  ARIRDAA+  F  HG  G +++ IA  AGVS  L+ HHFGSKEGLR ACD Y   
Sbjct: 10  DLTGRARIRDAALAVFADHGIKGATVQTIAAEAGVSTGLIRHHFGSKEGLRAACDAYAIG 69

Query: 64  EIRSEKLTAMQSNDPATWLGQLAQVESYAPLMAYLVRSMQSGGELAMMLWQQMIDNAEEY 123
            +  +  + +     A   G  A  ++      YL R++  G   A   +    D AE +
Sbjct: 70  TLLEQARSGLGEEASAPGFG-AAMYQASHTSTRYLARALVEGSASASEFFDTGADFAERF 128

Query: 124 LA 125
           L+
Sbjct: 129 LS 130


>tr|A8M5M5|A8M5M5_SALAI Tax_Id=391037 SubName: Full=Transcriptional
           regulator, TetR family;[Salinispora arenicola]
          Length = 217

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 12/128 (9%)

Query: 5   DLTAAARIRDAAIEQFGQHGFGV-SLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           DLT  AR+R+AA+  F Q GF   S RA+A  AG+S ALV+HHFGSKEGLR A D    E
Sbjct: 7   DLTGRARLREAALRLFAQRGFAATSARAVAAEAGLSPALVMHHFGSKEGLRAAVD----E 62

Query: 64  EIRSEKLTAMQSNDP--ATWLGQLAQVESY-----APLMAYLVRSMQSGGELAMMLWQQM 116
           ++ +    A++  DP     +  L +V +        L  YL R +Q     +  L+ ++
Sbjct: 63  QVLARLGAALRELDPGGGDLMASLGEVSARMFGADPVLRGYLRRVLQEDSPASAALFGRL 122

Query: 117 IDNAEEYL 124
           +D+A   L
Sbjct: 123 LDSARTEL 130


>tr|A4X1J6|A4X1J6_SALTO Tax_Id=369723 SubName: Full=Transcriptional
           regulator, TetR family;[Salinispora tropica]
          Length = 266

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 12/128 (9%)

Query: 5   DLTAAARIRDAAIEQFGQHGFGV-SLRAIAEGAGVSAALVIHHFGSKEGLRKACDNYVAE 63
           DLT  AR+R+AA+  F + GF   S RA+A  AG+S ALV+HHFGSKEGLR A D    E
Sbjct: 37  DLTGRARLREAALRLFAERGFAATSARAVAAEAGLSPALVMHHFGSKEGLRAAVD----E 92

Query: 64  EIRSEKLTAMQSNDPA-----TWLGQL-AQVESYAP-LMAYLVRSMQSGGELAMMLWQQM 116
           E+ +   TA++  DP+       LG++ A++    P L  YL R +Q     +  L+ ++
Sbjct: 93  EVLARLGTALRELDPSGTDLMMSLGEVSARMFGADPVLRGYLRRVLQEDSPASAALFGRL 152

Query: 117 IDNAEEYL 124
           ++ A   L
Sbjct: 153 LEGARAEL 160


>tr|Q49968|Q49968_MYCLE Tax_Id=1769 SubName:
           Full=U1756s;[Mycobacterium leprae]
          Length = 89

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/51 (62%), Positives = 42/51 (82%)

Query: 132 TIKASRDPKARAKFLAITGAGGFLLYLQMHQTPTDLRAVLRDYARDMLLPS 182
           T K SRDP+ RAK+LAITG+  +LLYL +H+  T+LR +LRDYAR++LLPS
Sbjct: 15  TRKPSRDPQTRAKYLAITGSSSYLLYLHIHENSTELRELLRDYAREILLPS 65


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.319    0.132    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,465,147,914
Number of extensions: 54542740
Number of successful extensions: 158828
Number of sequences better than 10.0: 3366
Number of HSP's gapped: 161660
Number of HSP's successfully gapped: 3367
Length of query: 212
Length of database: 3,846,993,858
Length adjustment: 132
Effective length of query: 80
Effective length of database: 2,358,667,062
Effective search space: 188693364960
Effective search space used: 188693364960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)