BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4293 (208 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HSC1|B2HSC1_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 51 9e-05 tr|A0PMP8|A0PMP8_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 51 9e-05 tr|Q7U0I4|Q7U0I4_MYCBO Tax_Id=1765 SubName: Full=CONSERVED HYPOT... 49 3e-04 tr|O06556|O06556_MYCTU Tax_Id=1773 SubName: Full=CONSERVED HYPOT... 49 3e-04 tr|C6DV00|C6DV00_MYCTK Tax_Id=478434 SubName: Full=Conserved ala... 49 3e-04 tr|C1AMF2|C1AMF2_MYCBT Tax_Id=561275 SubName: Full=Hypothetical ... 49 3e-04 tr|A5U1K6|A5U1K6_MYCTA Tax_Id=419947 SubName: Full=Conserved hyp... 49 3e-04 tr|A1KHU8|A1KHU8_MYCBP Tax_Id=410289 SubName: Full=Conserved hyp... 49 3e-04 tr|Q8VK55|Q8VK55_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 49 3e-04 tr|A5WLI6|A5WLI6_MYCTF Tax_Id=336982 SubName: Full=Conserved ala... 49 3e-04 tr|A2VH66|A2VH66_MYCTU Tax_Id=348776 SubName: Full=Conserved hyp... 49 3e-04 tr|Q73WN5|Q73WN5_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 45 0.004 tr|B8ZRQ8|B8ZRQ8_MYCLB Tax_Id=561304 SubName: Full=Conserved hyp... 40 0.16 tr|Q9CBW9|Q9CBW9_MYCLE Tax_Id=1769 SubName: Full=Conserved hypot... 39 0.27 >tr|B2HSC1|B2HSC1_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical secreted protein;[Mycobacterium marinum] Length = 208 Score = 50.8 bits (120), Expect = 9e-05 Identities = 29/58 (50%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWTYVR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTYVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|A0PMP8|A0PMP8_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical secreted protein;[Mycobacterium ulcerans] Length = 208 Score = 50.8 bits (120), Expect = 9e-05 Identities = 29/58 (50%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWTYVR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTYVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|Q7U0I4|Q7U0I4_MYCBO Tax_Id=1765 SubName: Full=CONSERVED HYPOTHETICAL ALA-, PRO-RICH PROTEIN;[Mycobacterium bovis] Length = 227 Score = 49.3 bits (116), Expect = 3e-04 Identities = 28/58 (48%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWT+VR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTFVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|O06556|O06556_MYCTU Tax_Id=1773 SubName: Full=CONSERVED HYPOTHETICAL ALA-, PRO-RICH PROTEIN;[Mycobacterium tuberculosis] Length = 227 Score = 49.3 bits (116), Expect = 3e-04 Identities = 28/58 (48%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWT+VR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTFVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|C6DV00|C6DV00_MYCTK Tax_Id=478434 SubName: Full=Conserved alanine and proline rich protein;[Mycobacterium tuberculosis] Length = 227 Score = 49.3 bits (116), Expect = 3e-04 Identities = 28/58 (48%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWT+VR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTFVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|C1AMF2|C1AMF2_MYCBT Tax_Id=561275 SubName: Full=Hypothetical ala-, pro-rich protein;[Mycobacterium bovis] Length = 227 Score = 49.3 bits (116), Expect = 3e-04 Identities = 28/58 (48%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWT+VR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTFVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|A5U1K6|A5U1K6_MYCTA Tax_Id=419947 SubName: Full=Conserved hypothetical alanine and proline rich protein;[Mycobacterium tuberculosis] Length = 227 Score = 49.3 bits (116), Expect = 3e-04 Identities = 28/58 (48%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWT+VR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTFVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|A1KHU8|A1KHU8_MYCBP Tax_Id=410289 SubName: Full=Conserved hypothetical ala-, pro-rich protein;[Mycobacterium bovis] Length = 227 Score = 49.3 bits (116), Expect = 3e-04 Identities = 28/58 (48%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWT+VR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTFVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|Q8VK55|Q8VK55_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 230 Score = 49.3 bits (116), Expect = 3e-04 Identities = 28/58 (48%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWT+VR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTFVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|A5WLI6|A5WLI6_MYCTF Tax_Id=336982 SubName: Full=Conserved alanine and proline rich protein;[Mycobacterium tuberculosis] Length = 227 Score = 49.3 bits (116), Expect = 3e-04 Identities = 28/58 (48%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWT+VR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTFVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|A2VH66|A2VH66_MYCTU Tax_Id=348776 SubName: Full=Conserved hypothetical ala-, pro-rich protein;[Mycobacterium tuberculosis C] Length = 227 Score = 49.3 bits (116), Expect = 3e-04 Identities = 28/58 (48%), Positives = 29/58 (50%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWT+VR TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTFVRAAAVLVGSSAALLTGGIAHADPAPAPAPAPNIPQQLISSAANAPQILQN 58 >tr|Q73WN5|Q73WN5_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 232 Score = 45.4 bits (106), Expect = 0.004 Identities = 28/58 (48%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXXQQLISSAANAPQILQN 58 MPTIWTY+R TGGI QQLISSAANAPQILQN Sbjct: 1 MPTIWTYLRAAAVVVGSSAALLTGGIAHADPVPTPPVPNIP-QQLISSAANAPQILQN 57 >tr|B8ZRQ8|B8ZRQ8_MYCLB Tax_Id=561304 SubName: Full=Conserved hypothetical Proline rich protein;[Mycobacterium leprae] Length = 180 Score = 40.0 bits (92), Expect = 0.16 Identities = 27/64 (42%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXX------QQLISSAANAPQ 54 M TIWTY+R TGGI QQLISSAANAPQ Sbjct: 1 MATIWTYLRATAIVVGSSAALLTGGIAHADTAPAPAPAPAPAPALNIPQQLISSAANAPQ 60 Query: 55 ILQN 58 ILQN Sbjct: 61 ILQN 64 >tr|Q9CBW9|Q9CBW9_MYCLE Tax_Id=1769 SubName: Full=Conserved hypothetical Proline rich protein;[Mycobacterium leprae] Length = 182 Score = 39.3 bits (90), Expect = 0.27 Identities = 27/66 (40%), Positives = 28/66 (42%), Gaps = 8/66 (12%) Query: 1 MPTIWTYVRXXXXXXXXXXXXXTGGIXXXXXXXXXXXXXXXX--------QQLISSAANA 52 M TIWTY+R TGGI QQLISSAANA Sbjct: 1 MATIWTYLRATAIVVGSSAALLTGGIAHADTAPAPAPAPAPAPAPALNIPQQLISSAANA 60 Query: 53 PQILQN 58 PQILQN Sbjct: 61 PQILQN 66 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.315 0.129 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 230,639,419 Number of extensions: 1304630 Number of successful extensions: 178 Number of sequences better than 10.0: 14 Number of HSP's gapped: 164 Number of HSP's successfully gapped: 14 Length of query: 208 Length of database: 3,846,993,858 Length adjustment: 131 Effective length of query: 77 Effective length of database: 2,369,942,265 Effective search space: 182485554405 Effective search space used: 182485554405 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 77 (34.3 bits)