BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4442 (464 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HDG5|B2HDG5_MYCMM Tax_Id=216594 SubName: Full=Prophage inte... 917 0.0 tr|A4T6I6|A4T6I6_MYCGI Tax_Id=350054 SubName: Full=Phage integra... 721 0.0 tr|C2ATA3|C2ATA3_TSUPA Tax_Id=521096 SubName: Full=Putative unch... 308 7e-82 tr|A3Q2P8|A3Q2P8_MYCSJ Tax_Id=164757 SubName: Full=Phage integra... 223 5e-56 tr|C1AWB0|C1AWB0_RHOOB Tax_Id=632772 SubName: Full=Phage integra... 147 4e-33 tr|C0TZL7|C0TZL7_9ACTO Tax_Id=526225 SubName: Full=Site-specific... 100 5e-19 tr|Q2RHJ2|Q2RHJ2_MOOTA Tax_Id=264732 SubName: Full=Phage integra... 95 2e-17 tr|Q0RPW7|Q0RPW7_FRAAA Tax_Id=326424 SubName: Full=Integrase;[Fr... 94 5e-17 tr|C9RBE5|C9RBE5_AMMDK Tax_Id=429009 SubName: Full=Integrase fam... 93 8e-17 tr|Q1AVM4|Q1AVM4_RUBXD Tax_Id=266117 SubName: Full=Phage integra... 92 2e-16 tr|Q1AUQ4|Q1AUQ4_RUBXD Tax_Id=266117 SubName: Full=Phage integra... 91 3e-16 tr|C2ASJ8|C2ASJ8_TSUPA Tax_Id=521096 SubName: Full=Phage integra... 91 4e-16 tr|Q854V7|Q854V7_9CAUD Tax_Id=205872 (41)SubName: Full=Gp41;[Myc... 90 5e-16 tr|A1UHF4|A1UHF4_MYCSK Tax_Id=189918 SubName: Full=Phage integra... 89 2e-15 tr|C9RA80|C9RA80_AMMDK Tax_Id=429009 SubName: Full=Integrase fam... 89 2e-15 tr|Q1B2F2|Q1B2F2_MYCSS Tax_Id=164756 SubName: Full=Phage integra... 88 2e-15 tr|C0UD86|C0UD86_9ACTO Tax_Id=526225 SubName: Full=Site-specific... 87 4e-15 tr|Q1ATW8|Q1ATW8_RUBXD Tax_Id=266117 SubName: Full=Phage integra... 86 8e-15 tr|C0U2C7|C0U2C7_9ACTO Tax_Id=526225 SubName: Full=Site-specific... 86 8e-15 tr|A5FQU2|A5FQU2_DEHSB Tax_Id=216389 SubName: Full=Phage integra... 86 1e-14 tr|A8CPL1|A8CPL1_9CHLR Tax_Id=311424 SubName: Full=Phage integra... 85 2e-14 tr|C8XES3|C8XES3_NAKMY Tax_Id=479431 SubName: Full=Integrase fam... 84 3e-14 tr|D1BL69|D1BL69_9FIRM Tax_Id=479436 SubName: Full=Integrase fam... 82 1e-13 tr|A0QET6|A0QET6_MYCA1 Tax_Id=243243 SubName: Full=TraSA:integra... 82 2e-13 tr|Q252J3|Q252J3_DESHY Tax_Id=138119 SubName: Full=Putative unch... 80 7e-13 tr|Q1B7V4|Q1B7V4_MYCSS Tax_Id=164756 SubName: Full=Phage integra... 79 1e-12 tr|A1UH53|A1UH53_MYCSK Tax_Id=189918 SubName: Full=Phage integra... 79 1e-12 tr|C7MYH0|C7MYH0_SACVD Tax_Id=471857 SubName: Full=Site-specific... 78 3e-12 tr|A1HTM7|A1HTM7_9FIRM Tax_Id=401526 SubName: Full=Phage integra... 78 3e-12 tr|B2HGZ7|B2HGZ7_MYCMM Tax_Id=216594 SubName: Full=Prophage inte... 77 4e-12 tr|Q9RX02|Q9RX02_DEIRA Tax_Id=1299 SubName: Full=Integrase, puta... 76 1e-11 tr|Q0REL9|Q0REL9_FRAAA Tax_Id=326424 (int)SubName: Full=Integras... 75 1e-11 tr|A1WV14|A1WV14_HALHL Tax_Id=349124 SubName: Full=Phage integra... 75 2e-11 tr|D1BBK2|D1BBK2_9MICO Tax_Id=446469 SubName: Full=Site-specific... 75 2e-11 tr|A3Q3G1|A3Q3G1_MYCSJ Tax_Id=164757 SubName: Full=Phage integra... 74 5e-11 tr|B9MQ70|B9MQ70_ANATD Tax_Id=521460 SubName: Full=Integrase fam... 73 7e-11 tr|C1YHL2|C1YHL2_NOCDA Tax_Id=446468 SubName: Full=Site-specific... 73 7e-11 tr|B5GE73|B5GE73_9ACTO Tax_Id=465543 SubName: Full=TraSA:integra... 72 1e-10 tr|C0W4G9|C0W4G9_9ACTO Tax_Id=525246 SubName: Full=Phage integra... 72 2e-10 tr|C0CRV3|C0CRV3_9FIRM Tax_Id=476272 SubName: Full=Putative unch... 72 2e-10 tr|A8L4S3|A8L4S3_FRASN Tax_Id=298653 SubName: Full=Integrase fam... 71 3e-10 tr|Q5Z1Y5|Q5Z1Y5_NOCFA Tax_Id=37329 SubName: Full=Putative phage... 71 3e-10 tr|C0ZMF9|C0ZMF9_RHOE4 Tax_Id=234621 SubName: Full=Putative inte... 70 4e-10 tr|C0UDI1|C0UDI1_9ACTO Tax_Id=526225 SubName: Full=Site-specific... 69 1e-09 tr|B5G9R4|B5G9R4_9ACTO Tax_Id=465543 SubName: Full=Phage integra... 69 2e-09 tr|O86766|O86766_STRCO Tax_Id=1902 SubName: Full=TraSA:integrase... 68 2e-09 tr|A6WXA0|A6WXA0_OCHA4 Tax_Id=439375 SubName: Full=Phage integra... 68 3e-09 tr|A0QCT7|A0QCT7_MYCA1 Tax_Id=243243 SubName: Full=Integrase;[My... 68 3e-09 tr|D1C8V1|D1C8V1_9CHLR Tax_Id=479434 SubName: Full=Integrase fam... 68 3e-09 tr|P71956|P71956_MYCTU Tax_Id=1773 SubName: Full=PROBABLE phiRv2... 67 4e-09 >tr|B2HDG5|B2HDG5_MYCMM Tax_Id=216594 SubName: Full=Prophage integrase;[Mycobacterium marinum] Length = 464 Score = 917 bits (2370), Expect = 0.0 Identities = 454/464 (97%), Positives = 454/464 (97%) Query: 1 MAYVRAHETKQKRNGKALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDEL 60 MAYVRAHETKQKRNGKALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDEL Sbjct: 1 MAYVRAHETKQKRNGKALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDEL 60 Query: 61 NAARHTTGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIF 120 NAARHTTGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIF Sbjct: 61 NAARHTTGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIF 120 Query: 121 DTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGA 180 DTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGA Sbjct: 121 DTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGA 180 Query: 181 IVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFM 240 IVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAG VEFM Sbjct: 181 IVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGLPAYPAYALLVEFM 240 Query: 241 AYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPW 300 AYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPW Sbjct: 241 AYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPW 300 Query: 301 LAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIV 360 LAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIV Sbjct: 301 LAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIV 360 Query: 361 KPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLT 420 KPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLT Sbjct: 361 KPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLT 420 Query: 421 LDTYGDYIPEQDGGALNTLPEPPAPVRPTETVNNVVNLFGRQSS 464 LDTYGDYIPEQDGGALNTLPEPPAPVRPTETVNNVVNLFGRQSS Sbjct: 421 LDTYGDYIPEQDGGALNTLPEPPAPVRPTETVNNVVNLFGRQSS 464 >tr|A4T6I6|A4T6I6_MYCGI Tax_Id=350054 SubName: Full=Phage integrase family protein;[Mycobacterium gilvum] Length = 469 Score = 721 bits (1862), Expect = 0.0 Identities = 351/465 (75%), Positives = 392/465 (84%), Gaps = 7/465 (1%) Query: 1 MAYVRAHETKQKRNGKALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDEL 60 MAYVRAH+TKQ+RNGK +K Y VVWRE+VRDEFGLPTG TRAR+E+YPTR+AAE RRDEL Sbjct: 1 MAYVRAHDTKQRRNGKVVKTYAVVWREAVRDEFGLPTGATRARRETYPTRDAAEVRRDEL 60 Query: 61 NAARHT-TGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYI 119 NAA+HT GTSALAEQR GE PFG++AR WLDAQA++VA GK+KQRTVDEY+R L TY+ Sbjct: 61 NAAKHTHAGTSALAEQRAKGEQPFGFYARAWLDAQAVRVASGKVKQRTVDEYERQLHTYV 120 Query: 120 FDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHG 179 LG AVAA+TPAH E LLT LVR+ SRQGD+KP+TPGTVKHVWDV+RRVL+YA+ HG Sbjct: 121 LGELGSLAVAAVTPAHLERLLTGLVRRQSRQGDRKPITPGTVKHVWDVVRRVLKYAVKHG 180 Query: 180 AIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXX--- 236 A+ +NP DRVDFSASRATGDHA FEHHPLT+ QVG L+AA+ G Sbjct: 181 ALDSNPADRVDFSASRATGDHAEFEHHPLTAAQVGALSAAVAGHAREGYEGPELPAYPVY 240 Query: 237 ---VEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRR 293 VEF+AYTGLRAAE +GLEV DL+F+P PRCSV V RTKDRKNG W+ GT KSK+SRR Sbjct: 241 GLLVEFLAYTGLRAAEAAGLEVADLLFSPGPRCSVRVARTKDRKNGVWVVGTPKSKRSRR 300 Query: 294 TVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMG 353 TVPLPPWLA+RMADYLA HPR +EP APLWPSR NGGGHRA GQRYAVPLDWSQPLA+G Sbjct: 301 TVPLPPWLAKRMADYLAEVHPRGDEPNAPLWPSRRNGGGHRAVGQRYAVPLDWSQPLALG 360 Query: 354 TFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLG 413 TFYDTI+KPALEAV LPA+RPATKDAPA RGVRLHDLRHTFAVLQLSAGTHFMQVSKWLG Sbjct: 361 TFYDTILKPALEAVGLPATRPATKDAPAIRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLG 420 Query: 414 HSTFTLTLDTYGDYIPEQDGGALNTLPEPPAPVRPTETVNNVVNL 458 HST+TLTLD YGDYIPE+DGGA N LPEPPAP RP E V+NVV L Sbjct: 421 HSTYTLTLDVYGDYIPEEDGGAANNLPEPPAPQRPLEAVDNVVPL 465 >tr|C2ATA3|C2ATA3_TSUPA Tax_Id=521096 SubName: Full=Putative uncharacterized protein;[Tsukamurella paurometabola DSM 20162] Length = 319 Score = 308 bits (790), Expect = 7e-82 Identities = 171/327 (52%), Positives = 205/327 (62%), Gaps = 41/327 (12%) Query: 168 LRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGX 227 ++ VL YA HGAI TNP ++VDF+ RA GD +F+HHPLT+EQV A + Sbjct: 1 MKNVLTYATRHGAIPTNPCEQVDFNTGRAVGDREKFKHHPLTAEQVAATARNV------G 54 Query: 228 XXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEP------------RCSVNVRRTKD 275 F+ Y+GLR AE +GLEV DL F P +C V+VRRTKD Sbjct: 55 KLYPIYELLAYFLPYSGLRKAECAGLEVQDLEFTTRPASAATDGTDSPVQCVVHVRRTKD 114 Query: 276 RKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEP-----TAPLWPSRNNG 330 RK G W T T KS+KSRR+VPLP WLAERM YL HP E TAPLWPSR NG Sbjct: 115 RKGGTWTTSTPKSRKSRRSVPLPGWLAERMHAYLRDVHPHGPESDDYDATAPLWPSRKNG 174 Query: 331 GGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPAT-------- 382 G +R KG+R +PLDW+QP +GT+++TI+ PAL LP SRPA PAT Sbjct: 175 G-YRVKGERTVMPLDWTQPPELGTWFETILAPALVEAGLPVSRPARPAKPATDTAPALPA 233 Query: 383 ----RGVRLHDL-RHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGALN 437 RGVRLHD RHTFA +QLSAG HFM VS+W+GH+ +TLTLDTYGD+IP +DGGALN Sbjct: 234 QPSVRGVRLHDYGRHTFATMQLSAGVHFMLVSQWMGHAQYTLTLDTYGDWIPSKDGGALN 293 Query: 438 TLPEPPAPVRPTETVNN---VVNLFGR 461 TLP PAPV TE + V+ LFGR Sbjct: 294 TLP-APAPVTNTEDAQDLAPVIQLFGR 319 >tr|A3Q2P8|A3Q2P8_MYCSJ Tax_Id=164757 SubName: Full=Phage integrase family protein;[Mycobacterium sp.] Length = 503 Score = 223 bits (567), Expect = 5e-56 Identities = 179/517 (34%), Positives = 238/517 (46%), Gaps = 99/517 (19%) Query: 1 MAYVRAHETKQK-RNGKALKRYEVVWRESVRDEFG--LPTGQTRA--------RQESYPT 49 MA++ A ET ++ G+ LKRY V W E+ RD+ G +P RA R+E++ T Sbjct: 1 MAWITAVETDRRDERGRPLKRYRVEWYETARDDDGQPIPRYPNRADSPPKRVRRRETFDT 60 Query: 50 REAAEARRDELNAARHTTGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVD 109 R+AA+ R DE+ A + G S A QR AG P ++A WLD A G++K R + Sbjct: 61 RQAAQDRADEI-APKIARGHSPAA-QRDAGNRPLSHYADAWLDGLA-----GQVKPRVLA 113 Query: 110 EYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKP------------LT 157 +Y R Y+ AVA+IT A L+ R +P L+ Sbjct: 114 DYRANYRRYVAPVFADRAVASITAADVRRWRADLMAPRPRPAHARPKGTADADAETVTLS 173 Query: 158 PGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHAR-FEHHPLTSEQVGRL 216 TVKH ++ LRR+L A+ GA+ NP V RAT A F PLT+ ++ Sbjct: 174 RSTVKHAFETLRRILDVAVVDGALTANPCASVP--KMRATDPDAEPFTARPLTAAEI--- 228 Query: 217 AAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFA--PEPRCSVNVRRTK 274 AA+ I V F A+TGLRA E++GL VGDL+ P S++V RT+ Sbjct: 229 -AAVADHIGRVQGHPIYGLVVLFAAFTGLRAGELAGLNVGDLMLPRIPGSAGSLSVTRTR 287 Query: 275 DRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPR------ANEPTAPLWPSRN 328 G + TGT KS KSRR VP+ WLA+ + YLA DHP A +P+APL+P R Sbjct: 288 RAVAGGFETGTPKSAKSRRVVPIDGWLADDLRAYLADDHPHGDPTSAAFDPSAPLFPGRY 347 Query: 329 NGG----GHRAKGQ-----------------------RYAVP--------------LDWS 347 H ++ + RY+ P WS Sbjct: 348 GRSEPLPAHLSRDEIEAVRPTILDADARLSRSGEPDRRYSRPDPHASATRCAPSHGYKWS 407 Query: 348 QPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQ 407 P+ PAL A+ L VR HDLRH FAV+ LSAG H+M Sbjct: 408 APVNPAGIAKHYFAPALAALGL-------------GHVRWHDLRHAFAVMSLSAGEHYMS 454 Query: 408 VSKWLGHSTFTLTLDTYGDYIPEQDGGALNTLPEPPA 444 VSK LGH++F TL Y DYI E DGG L P A Sbjct: 455 VSKMLGHASFVTTLTVYADYITEGDGGKNAPLRRPTA 491 >tr|C1AWB0|C1AWB0_RHOOB Tax_Id=632772 SubName: Full=Phage integrase family protein;[Rhodococcus opacus] Length = 461 Score = 147 bits (370), Expect = 4e-33 Identities = 158/496 (31%), Positives = 218/496 (43%), Gaps = 105/496 (21%) Query: 11 QKRNGKA-LKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAE--ARRDELNAARHTT 67 QKR +A + RY V WR P G+ R++ +PT++AAE A E NA R TT Sbjct: 6 QKRTTQAGVVRYVVKWRT--------PDGKGRSKG-GFPTKKAAEDYATTVEYNANRGTT 56 Query: 68 GTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTY--------- 118 KAG + F A WL ++ LK RT EY+ LLR Sbjct: 57 FDP------KAGGVAFRQAAGEWL------ASRHDLKPRTHAEYENLLRPKTTGPLATRA 104 Query: 119 --IFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYAL 176 I T GG + AIT ++ VR + G K P TV+H + V+R VL A+ Sbjct: 105 LSIDATFGGYPLNAITRKQ----ISEWVRALTAAGKK----PSTVRHAYFVVRMVLAQAV 156 Query: 177 HHGAIVTNPTDRVDFSASR-ATGDHARFEHHP---LTSEQVGRLAAAIRGDIAGXXXXXX 232 G + TNP D V + R A G P LT+EQV L + Sbjct: 157 VDGRLTTNPADYVKLPSERSAAGGTPGVVDDPDMFLTAEQVSGLVVST---------PWP 207 Query: 233 XXXXVEFMAYTGLRAAEVSGLEVGDLVFA---------PEPRCSVNVRRTKDRKNGAWIT 283 V A++GLRAAE++GL+VGD+ P+P ++ V RT +G Sbjct: 208 YNVLVHLAAWSGLRAAELAGLQVGDVELPAATMNPNARPKPG-TLRVERTVIALDGKPTY 266 Query: 284 GTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRN----NGGGHRA---K 336 T K+K SRR VPL P + DYLA HPR +E TAPL+P+ G RA Sbjct: 267 DTPKTKGSRRRVPLTPATVAVLRDYLAA-HPRRDEATAPLFPAMRLVAAKPTGLRATDAS 325 Query: 337 GQRYA------------------VPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKD 378 G+R + LDW L TFY + +PA+ L A+R Sbjct: 326 GKRIVPKAEDALAALSIEDAEGRLTLDWDVVLRHPTFYKAVYRPAV----LRANRLGAAL 381 Query: 379 APATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDG----- 433 PA ++ H LRHT+A L ++AG +++++++GH+ T TL Y + Sbjct: 382 PPA---LKFHALRHTYASLCVAAGIPPLELARFMGHAKVTTTLSVYAHLFEDDHADAMAA 438 Query: 434 -GALNTLPEPPAPVRP 448 GA+ T P V P Sbjct: 439 LGAMGTTPRQTGNVVP 454 >tr|C0TZL7|C0TZL7_9ACTO Tax_Id=526225 SubName: Full=Site-specific recombinase XerD;[Geodermatophilus obscurus DSM 43160] Length = 377 Score = 100 bits (248), Expect = 5e-19 Identities = 116/427 (27%), Positives = 169/427 (39%), Gaps = 66/427 (15%) Query: 15 GKALKRYEVVWRESV--RDEFGLPTGQTRARQESYPTREAAEARRDELNAARHTTGTSAL 72 G KR W ++ RD+FG + + R+ S T+ A+ EL R G Sbjct: 9 GSIFKRANGRWYSALTYRDDFG----EVKRREVSGRTQAEVRAKLRELRE-RVEAGAPV- 62 Query: 73 AEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAIT 132 K + + W +AL + K Q T+D Y + R+++ LG + + Sbjct: 63 ----KDASITMAAWLEDWT-TKALPASDRK--QATIDLYATIARSHLVPKLGSLPLDRLR 115 Query: 133 PAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFS 192 P++ EAL+ A R L+ +V+ ++ VLR L A+ G I NP V Sbjct: 116 PSNVEALVLAKRRAG--------LSASSVRTIYAVLRAALDVAVRDGLIQRNPAALVKRP 167 Query: 193 ASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSG 252 A R + L+++Q L A+RGD M TGLR E Sbjct: 168 AVE------RKDAGYLSAQQAEALLEAVRGD--------RLEALYRVMLATGLRRGEALA 213 Query: 253 LEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATD 312 L D+ V VR T R + G K++KSRRTVPLP E + Sbjct: 214 LHWRDVDL---DAAVVRVRWTLSRTSAGLELGEPKTEKSRRTVPLPVPAVETL------- 263 Query: 313 HPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPAS 372 RA+ R ++ A W A G + + + LE + Sbjct: 264 --RAHR--------------KRQAAEQLAAGSLWQ---ASGLVFTSEIGTPLEPRNVLRR 304 Query: 373 RPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQD 432 A + RGV LH LRH+ A L+AGTH V + LGHS++ +T D Y P Q Sbjct: 305 FEALAERAGLRGVHLHTLRHSAASFLLAAGTHTKVVQEHLGHSSYAITADIYSHVAPAQQ 364 Query: 433 GGALNTL 439 A + L Sbjct: 365 REAADKL 371 >tr|Q2RHJ2|Q2RHJ2_MOOTA Tax_Id=264732 SubName: Full=Phage integrase;[Moorella thermoacetica] Length = 390 Score = 94.7 bits (234), Expect = 2e-17 Identities = 99/387 (25%), Positives = 156/387 (40%), Gaps = 57/387 (14%) Query: 69 TSALAEQRKAGEL-PFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTA 127 T AL +Q+ G + P WL+ A+ L+Q T + Y+ +LR ++ TLG Sbjct: 52 TQALYQQQNGGFIEPSKITVEQWLNRWLTDYAKPHLRQSTWESYETVLRLHVIPTLGSIP 111 Query: 128 VAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTD 187 + + PA + L + + L+P V+++ VL + A G ++ NPT+ Sbjct: 112 LKKLQPADIQRLYASKLESG--------LSPTRVRYIHVVLHEAMSQARESGLLLQNPTE 163 Query: 188 RVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRA 247 + H + + PL EQV R + D TGLR Sbjct: 164 ------AAKPPRHPKKKVQPLNPEQVKRFLETAKQD--------PLYPAFLLALGTGLRR 209 Query: 248 AEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMAD 307 E+ GL DL + + VR++ R K++KSRR +PLPP + + Sbjct: 210 GEILGLRWQDLDL---QKGILQVRQSLIRTREGLKFEEPKTEKSRRQIPLPPSVVAALKR 266 Query: 308 YLATDHPRANEPTAPLWPSRNN-GGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEA 366 + A W ++N G + P++ +P F + + L+ Sbjct: 267 HKA-------------WVNQNKLILGPDYEDHDLVFPVENGRPRDPKGFAEYFNR-LLDK 312 Query: 367 VALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGD 426 LP +RLHDLRHT A L L G H V + LGHST ++TLD Y Sbjct: 313 AGLP-------------HIRLHDLRHTHATLLLLEGVHPKVVQERLGHSTVSITLDIYSH 359 Query: 427 YIP---EQDGGALNTLPEPPAPVRPTE 450 +P E+ ++ L +P P E Sbjct: 360 ILPGLQEKAAERIDGLLQPKENPSPKE 386 >tr|Q0RPW7|Q0RPW7_FRAAA Tax_Id=326424 SubName: Full=Integrase;[Frankia alni] Length = 405 Score = 93.6 bits (231), Expect = 5e-17 Identities = 103/423 (24%), Positives = 170/423 (40%), Gaps = 76/423 (17%) Query: 23 VVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDELNAARHTTGTSALAE---QRKAG 79 V+WRE R G T E + +R AE + + AA + T + + R Sbjct: 13 VMWREGGR-------GST-PEYEKFASRTEAEVYKTLVEAAGNRRPTPVVEDGRPPRPIA 64 Query: 80 ELPFGY--FARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCE 137 LP +A WL + ++ RT +Y+R LR ++ LGG + A++ Sbjct: 65 GLPCTVETWATYWLSGLS------GVRGRTAKDYERDLRNHVLPLLGGLELTAVSSTDVG 118 Query: 138 ALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSA-SRA 196 + L ++ L P T+++ +L + + A+ H P + + A Sbjct: 119 QWVKGL--------QERGLAPKTIRNQHGLLSVLFQAAVDHEPQAMRPGNPCARTRLPEA 170 Query: 197 TGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVG 256 +G+ E H LT ++ RL AA+ V +A TGLR E +GL Sbjct: 171 SGE----EMHFLTPAELERLLAAL---------PPHYRPLVTTLALTGLRWGEATGLTAR 217 Query: 257 DLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRA 316 ++ P + + + + +G+ G K++ SRRTV LP L + + Sbjct: 218 NVDLLGTPGTTAVRQSLQRQADGSLQLGPPKTRTSRRTVTLPAKLVDVL----------- 266 Query: 317 NEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPAT 376 P+W + +G + FY+ + +PA+ L Sbjct: 267 ----IPVWSGK--------EGDEMVFTTQRGSLVRHSHFYNRVWRPAVLRAGL------- 307 Query: 377 KDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGAL 436 G+R+HDLRHT A +SAG + + LGH + T T+D YG +PE D G L Sbjct: 308 -----VPGLRIHDLRHTHAAWLISAGRPLPSIQRRLGHRSITTTIDRYGHLLPEVDRGDL 362 Query: 437 NTL 439 + L Sbjct: 363 DAL 365 >tr|C9RBE5|C9RBE5_AMMDK Tax_Id=429009 SubName: Full=Integrase family protein;[Ammonifex degensii] Length = 414 Score = 92.8 bits (229), Expect = 8e-17 Identities = 116/432 (26%), Positives = 167/432 (38%), Gaps = 70/432 (16%) Query: 15 GKALKRYEVVWRESVRDEFGLPTGQTRARQESYP-TREAAEARRDELNAARHTTGTSALA 73 G AL + E +W R G R+ Y TRE A + L A H L Sbjct: 40 GAALPK-EGIWE--ARASLGYDADGRPVRKSFYARTREEAVKK---LTQALHQASLGVLT 93 Query: 74 EQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITP 133 + L G + WL+ +GKL+ T+ Y+ ++R YI +LG + ++TP Sbjct: 94 APAR---LTLGEWLATWLETYK----KGKLRPTTLANYETVIRAYILPSLGSVPLRSVTP 146 Query: 134 AHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSA 193 A +AL +L + L+ TV+ V VL L+ A+ +G +V NP + A Sbjct: 147 ASLQALYNSL--------SARGLSARTVRLVHVVLNACLKQAVKNGLLVRNPAE-----A 193 Query: 194 SRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGL 253 + R PL E+V A RG+ TGLR EV GL Sbjct: 194 TEPPKLKRRVPVRPLAREEVEAFLKAARGE--------RLYPAFALALKTGLRRGEVLGL 245 Query: 254 EVGDLVFAPEPRCSVNVRRT----KDRKNG--AWITGTLKSKKSRRTVPLPPWLAERMAD 307 + D+ R + VRR+ KD + G + K++KSRRTVP L + Sbjct: 246 KWEDVDL---ERGVLRVRRSLVEAKDPETGKVRLVFQEPKTEKSRRTVP----LTRDVVA 298 Query: 308 YLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAV 367 L + R NE + + G F + KP Sbjct: 299 LLKSHKARQNEEKLYFGEAYEDNG---------------------LVFCTELGKPIWPRN 337 Query: 368 ALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDY 427 L A K A R R H LRHTFA L L++G V + LGH + T D Y + Sbjct: 338 FLRAFHSVLKKAGLERH-RFHALRHTFATLLLASGEELKNVQELLGHERISTTADVYAEV 396 Query: 428 IPEQDGGALNTL 439 + + A+ L Sbjct: 397 LEDAKKKAVTRL 408 >tr|Q1AVM4|Q1AVM4_RUBXD Tax_Id=266117 SubName: Full=Phage integrase;[Rubrobacter xylanophilus] Length = 377 Score = 91.7 bits (226), Expect = 2e-16 Identities = 95/367 (25%), Positives = 138/367 (37%), Gaps = 61/367 (16%) Query: 78 AGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCE 137 AG+L G + WL+ + ++QRT + Y+++ R +I LG +AA+TP H Sbjct: 67 AGKLTVGEYLDRWLEDSV----RDTVRQRTYERYEQISRVHIKPALGRIKLAALTPVH-- 120 Query: 138 ALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRAT 197 VR R+ L+ TV+++ L + L A+ G I N V R Sbjct: 121 ------VRGLYRERLDAGLSSRTVRYIHTTLHKALEAAVVDGLIPRNVASTVKAPCPRGP 174 Query: 198 GDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGD 257 + PL+ EQ + R D + GLR E+ GL+ D Sbjct: 175 ------DIRPLSQEQSRKFLEVARED--------RFYALYVLALHCGLREGELLGLKWED 220 Query: 258 LVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRAN 317 + ++ VRRT K+ K R L+ R + L + R N Sbjct: 221 VDLEGG---TLQVRRTLSETRTGHKFELPKNGKGRSIK-----LSRRAVEALRSHRRRQN 272 Query: 318 EP---TAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRP 374 E LW + P + KP LE LPA Sbjct: 273 EERLRVGSLWQDND-----------LVFPTTTGTTMRATNLLGRHFKPLLEKAGLPA--- 318 Query: 375 ATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGG 434 +RLHDLRHT A + L AG H V + LGH++ ++TLD Y I DGG Sbjct: 319 ----------IRLHDLRHTCATILLVAGKHPKYVQELLGHASISITLDIYSHVIERMDGG 368 Query: 435 ALNTLPE 441 + E Sbjct: 369 LAEAMDE 375 >tr|Q1AUQ4|Q1AUQ4_RUBXD Tax_Id=266117 SubName: Full=Phage integrase;[Rubrobacter xylanophilus] Length = 379 Score = 90.9 bits (224), Expect = 3e-16 Identities = 103/404 (25%), Positives = 151/404 (37%), Gaps = 57/404 (14%) Query: 37 TGQTRARQESYPTREAAEARRDELNAARHTTGTSALAEQRKAGELPFGYFARGWLDAQAL 96 T + R R+ Y A A++ LN A + AG L G + WL Sbjct: 27 TAEGRKRKTVYGKTRAEVAKK--LNKALSDREDGLFFD---AGNLKVGEYMDRWLRDSV- 80 Query: 97 KVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPL 156 +G + RT+ Y +R +I LG + +TPAH + L RQ L Sbjct: 81 ---EGNVGPRTLANYKLQVRRHIKPVLGEIQLKTLTPAHVQGLY--------RQKLDAGL 129 Query: 157 TPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRL 216 P +V+++ VL R L AL G + N ++ VD + E LT E+ + Sbjct: 130 APSSVRYIHAVLHRALTQALRWGLVPRNVSEAVDLPKLVSE------EVDALTPEEARKF 183 Query: 217 AAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDR 276 A RGD TG+R E+ GL D+ ++ V R R Sbjct: 184 LDAARGD--------RFEALYVVAVMTGMRRGELLGLRWSDIDLGQNAPATLRVGRQLQR 235 Query: 277 -KNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRA 335 ++G+ + RT+ LP R + L R E P +R Sbjct: 236 MRDGSGLKFVAPKGGKGRTIRLP----SRAVEALKAHRARQAEERLKAGPL------YRD 285 Query: 336 KGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFA 395 +G +A + PL KP L+ LP +R HDLRHT A Sbjct: 286 EGLVFASEV--GTPLEPSNIDRRSFKPLLKKAGLP-------------DIRFHDLRHTCA 330 Query: 396 VLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGALNTL 439 + LS G + V + LGH+ LTL TY ++P N + Sbjct: 331 TVLLSQGVNPKFVQELLGHADIKLTLGTYSHFLPSMGDQTANAM 374 >tr|C2ASJ8|C2ASJ8_TSUPA Tax_Id=521096 SubName: Full=Phage integrase family protein;[Tsukamurella paurometabola DSM 20162] Length = 509 Score = 90.5 bits (223), Expect = 4e-16 Identities = 136/546 (24%), Positives = 197/546 (36%), Gaps = 148/546 (27%) Query: 7 HETKQKRNGKALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREA-AEARRDELNAARH 65 H+ + +GK Y+V WR P G+ R R R+A A A E +A R Sbjct: 5 HKFTSRVDGKPY--YKVKWRT--------PDGKHRTRGGFARRRDAEAYAETVEFSARR- 53 Query: 66 TTGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRT--YIFDTL 123 L ++G++ F + WL ++ LK T Y LR I Sbjct: 54 -----GLTFDPRSGDMLFRAAGQAWLQSRT------DLKIATRTNYTGQLRADGEIDRRF 102 Query: 124 GGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVT 183 GG + IT +A + V S + +V++ + ++R +L A+ + Sbjct: 103 GGYPLNKITREDLQAWVNEQVAGGS--------SSSSVRNKFFIVRMILSQAVVDRRLEF 154 Query: 184 NPTDRVDFSASRATGDHARFEHHP--------------------LTSEQVGRLAAAIRGD 223 +P D V A R G A LT+EQV L AA Sbjct: 155 SPADHVKLPAPRRKGKQASTASGQAASMVGSAPSVHGSTEDAAFLTAEQVEYLTAAT--- 211 Query: 224 IAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWIT 283 V A+TGLR+ E++GL++GD+ +V+V+RT G Sbjct: 212 ------PWPYNILVHMAAWTGLRSGELTGLQIGDIDLGRNS--TVSVQRTALVVPGTPAD 263 Query: 284 G------------TLKSKKSRRTVPLPPWLAERMADYLATD------------------- 312 G T K+++SRR VPL + DYLA Sbjct: 264 GDSPATAPRAVYDTPKTRRSRRRVPLTAATVAVLRDYLAPAPRLDGGDRRFNAAATPLAP 323 Query: 313 ---------------HPRANEPTAPLWPSRNNGGGH--------RAKGQRYAVP------ 343 HPRA +PTAPL+P G G R P Sbjct: 324 RIDAPSSATGAPTYVHPRAGDPTAPLFPKMRLVAGRPTGKRAPRHETGPRAGQPMTPEEQ 383 Query: 344 --------------LDWSQPLAMGTFYDTIVKPAL--EAVALPAS--RPATKDAPATRGV 385 LDW+ L T+Y + +PAL ++AL A RP + A A Sbjct: 384 AARRTVAEAQARLELDWNAVLLHKTYYKAVFQPALLRASLALVADGLRPIPEHATA---- 439 Query: 386 RLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGALNTLPEPPAP 445 H LRHT+A +SAG H Q+S + GH++ T+ Y + A+ L A Sbjct: 440 --HSLRHTYASFCVSAGLHPKQISSYCGHASVNTTMGIYAHLFEDDHTEAMAALGSVGAT 497 Query: 446 VRPTET 451 R T Sbjct: 498 RRDNVT 503 >tr|Q854V7|Q854V7_9CAUD Tax_Id=205872 (41)SubName: Full=Gp41;[Mycobacterium phage Che9c] Length = 400 Score = 90.1 bits (222), Expect = 5e-16 Identities = 119/432 (27%), Positives = 174/432 (40%), Gaps = 68/432 (15%) Query: 4 VRAHETKQKRNGKALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDELNAA 63 ++ E + + G+ + RYE++ + G+ G+ + + YPT + A RD L Sbjct: 11 IKRVELEARSGGRPVVRYELIV------DVGVVDGKRKRLRRRYPTEKEA---RDALAQI 61 Query: 64 RHTT--GTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFD 121 R GT QR E WL A K A + + TVD Y+ L T + + Sbjct: 62 RGQVAQGTYVHPTQRTVREA-----CDDWL---AGKRAANRAES-TVDGYEEKL-TVVIE 111 Query: 122 TLGGTAVAAITPAHCEALLTALVRQA--SRQGD-KKPLTPGTVKHVWDVLRRVLRYALHH 178 LG + +T H + L+TAL S G +KP +P +V ++ +L +L Sbjct: 112 QLGEIEIQKLTKRHLDDLVTALREGGLPSPNGKPRKPWSPRSVNYLLGLLVSILESEQKQ 171 Query: 179 GAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVE 238 G V N VD + T PLT +V L A I GD Sbjct: 172 GHTVRNVAALVDRIEANPTPPD------PLTESEVETLLAHIAGDRYAIAWE-------- 217 Query: 239 FMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLP 298 +A G R AE+SGL D+ +V V+ T+ ++ I T KS+ SRR +PLP Sbjct: 218 -LALAGFRLAEISGLRWCDVDLDAR---TVTVQNTRLQRGKKRIEKTPKSRASRRELPLP 273 Query: 299 PWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDT 358 + A + A +A + G + A G Y V + PL + Sbjct: 274 D---DLFAAFKAARKIQAAD-------QLRLGEAYEASG--YVVVNEAGTPLTPNAIENR 321 Query: 359 IVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFT 418 + L+A L R VRLHD RHT L G +S WLGH++ Sbjct: 322 WAR-VLKAAGL-------------RHVRLHDARHTCGTLMHLRGVPTALISAWLGHASKA 367 Query: 419 LTLDTYGDYIPE 430 TL TY + PE Sbjct: 368 FTLQTYVNPKPE 379 >tr|A1UHF4|A1UHF4_MYCSK Tax_Id=189918 SubName: Full=Phage integrase family protein;[Mycobacterium sp.] Length = 407 Score = 88.6 bits (218), Expect = 2e-15 Identities = 109/438 (24%), Positives = 167/438 (38%), Gaps = 81/438 (18%) Query: 12 KRNGKALKRYEVVWRESVRDEFG----LPTG------QTRARQESYPTREAAEARRDELN 61 KRN +A E W ++V D G LP+ + RAR RE A +++ Sbjct: 2 KRNRRA--SVEDRWTKTVHDSDGNAKTLPSANHGKGSRWRARYVDDQGREHARGFSRKVD 59 Query: 62 AARHTTG------TSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLL 115 A G T + + +G + FG A W+ +A + +TV Y LL Sbjct: 60 AQAWLNGQVSDQVTGTWTDPKLSG-VTFGVIAERWIQTKATRAP------KTVAGYRSLL 112 Query: 116 RTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYA 175 + + ++ + ++ L S + + + L+P V V+ +VLRYA Sbjct: 113 DVVVLPRWRDVPLRDVSFEDLQQWVSGLSVNGSTRFEGRGLSPSRVIQAHQVVSQVLRYA 172 Query: 176 LHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXX 235 + + NP D ++ E LT EQ+ RLA A Sbjct: 173 VKAKHLPANPADGIELPRK------PEVEQRYLTHEQLQRLAVA----------SGRFRT 216 Query: 236 XVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTV 295 V + Y GLR E + L VGD+ + + +RR+ G + S RTV Sbjct: 217 FVLVLGYCGLRFGEAAALRVGDVNLSSR---RIRIRRSVTAVTGQGLVEGPTKNHSARTV 273 Query: 296 PLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTF 355 P+P +LA L L+PSR GG+ +G+ Sbjct: 274 PVPKFLAP-----LIETEVGGRVDDELLFPSRR--GGYLTEGE----------------- 309 Query: 356 YDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHS 415 V+ +A A+ A G+ H+LRHT A L ++AG + + LGH Sbjct: 310 ----VRWVFDAAAV---------AVGVTGLTPHELRHTCASLAIAAGANVKVLQTLLGHK 356 Query: 416 TFTLTLDTYGDYIPEQDG 433 T LTLD YG P+ G Sbjct: 357 TAMLTLDRYGHLFPDDLG 374 >tr|C9RA80|C9RA80_AMMDK Tax_Id=429009 SubName: Full=Integrase family protein;[Ammonifex degensii] Length = 383 Score = 88.6 bits (218), Expect = 2e-15 Identities = 87/342 (25%), Positives = 134/342 (39%), Gaps = 48/342 (14%) Query: 102 KLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTV 161 KL RT + Y +L+ ++ LGG + ++P H E ++A++ +A R K ++P TV Sbjct: 83 KLSLRTWERYGQLIEHWLIPHLGGIPLRKLSPVHLEKFISAML-EADRLDGKGKISPTTV 141 Query: 162 KHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIR 221 +H VL + LR A+ I NP + VD AR E L ++ RL +A Sbjct: 142 RHAALVLNKALRDAVKKRLIPYNPMEAVDKPRK------ARKEPPALKEGELRRLMSAAE 195 Query: 222 GDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAW 281 G + YTG R E+ GL D+ F E C ++ K G Sbjct: 196 G--------TYLYAPITLAVYTGARLGEILGLRWRDVDF--EAGCIFILQALKRNLKGEL 245 Query: 282 ITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYA 341 K+ +SRR + + P + R + W + Sbjct: 246 YFDEPKTPRSRRRIEIGPACLAAL---------RKQKKLQAEWKLKAGSA---------- 286 Query: 342 VPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGV--RLHDLRHTFAVLQL 399 W + + T D + A A + + G+ H LRHT A + L Sbjct: 287 ----WQETGLVCTREDG------SPIDPHAFSSAFRKLASKLGIDANFHALRHTHATMLL 336 Query: 400 SAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGALNTLPE 441 AG H VS+ LGH++ +T D Y +P GGA + E Sbjct: 337 KAGVHLKIVSERLGHASVAITGDLYSHVLPGMQGGAAQLVEE 378 >tr|Q1B2F2|Q1B2F2_MYCSS Tax_Id=164756 SubName: Full=Phage integrase;[Mycobacterium sp.] Length = 433 Score = 88.2 bits (217), Expect = 2e-15 Identities = 106/393 (26%), Positives = 151/393 (38%), Gaps = 71/393 (18%) Query: 39 QTRARQESYPTREAAEARRDELNAARHTTGTSALAEQRKAGELPFGYFARGWLDAQALKV 98 Q + S+ + A+A DE+ A + T A KAG + G W+ Q+ Sbjct: 39 QGQENTRSFDRKVDAQAWLDEITAMQVTGAYVA----PKAGRVSVGELYAKWVGTQS--- 91 Query: 99 AQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTP 158 LK+ T Y+ AVA + A + ++ + Sbjct: 92 ---HLKKTTASTRRYTWPVYVEPRWSAVAVADVQTTDVRAWVQSMTSSGAGAA------- 141 Query: 159 GTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAA 218 TV++ +LR++L A+ I NP + + R LT QV +LA Sbjct: 142 -TVENAVGILRQILEMAVEDRRIARNPCTGIKLPRRK------RRPRGYLTHRQVEQLAV 194 Query: 219 AIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKN 278 + D V F+AYTGLR E++ L VGD A R V+VR + Sbjct: 195 EVGTDAT----------VVRFLAYTGLRWGEMAALRVGD---AKMLRRRVHVRESVTEVE 241 Query: 279 GAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQ 338 G + KS + +R VP P +LA+ +A + P AP GG R Sbjct: 242 GQLEWSSPKSYE-QRMVPFPAFLADELAVLMIGKKPDDLIFAAP------EGGVLRVSNW 294 Query: 339 RYAVPLDWSQPLAMGTFYDTIVKPALEAVA-LPASRPATKDAPATRGVRLHDLRHTFAVL 397 R V ++ VK LE A P P HDLRHT A L Sbjct: 295 RRRV-------------FNKAVKRLLEKDATFPVVTP-------------HDLRHTAASL 328 Query: 398 QLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPE 430 +SAG + V LGH++ LTLDTY D P+ Sbjct: 329 AISAGANVKAVQTMLGHASAVLTLDTYADLFPD 361 >tr|C0UD86|C0UD86_9ACTO Tax_Id=526225 SubName: Full=Site-specific recombinase XerD;[Geodermatophilus obscurus DSM 43160] Length = 365 Score = 87.4 bits (215), Expect = 4e-15 Identities = 117/414 (28%), Positives = 159/414 (38%), Gaps = 85/414 (20%) Query: 25 WRESVRDEFGLPTGQTRARQESYPTREAAEARRDELNAARHTTGTSALAEQRKAGELPFG 84 +R RD G R ++ + R A+ DE +A T +A + G + Sbjct: 17 YRSRYRDAGG------RQHEKRFQRRVDAQRWLDEQTSAIVTQTWTA----PERGRVTVE 66 Query: 85 YFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALV 144 +A WL AQ LK T+ Y LLR I G +A IT A A + LV Sbjct: 67 AWAEQWLAAQT------GLKPSTLYRYRSLLRAQILPRWGRHRLADITHADVAAWVAQLV 120 Query: 145 RQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFE 204 L P TV+ VL +L A+ G I NP V +R R + Sbjct: 121 AGG--------LAPPTVRQAHRVLALILTLAVRDGRIPRNPAAGVPLPRTR------RAD 166 Query: 205 HHPLTSEQVGRLAAAIR--GDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAP 262 LT E+V RLA A GD+ V +AYTGLR E++ L V + F Sbjct: 167 PRFLTREEVERLADAAGEYGDV------------VRLLAYTGLRFGEMAALRVRRVDFL- 213 Query: 263 EPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAP 322 R + V + G GT K+ + +RTVP+P L E + Sbjct: 214 --RRRLTVAESATEVGGTVEYGTPKTHQ-QRTVPIPAVLVEPL----------------- 253 Query: 323 LWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPAT 382 SR GG R + L G F PA +A L P Sbjct: 254 ---SRRCGGKGR---DDLVLTSPGGAVLRSGNFRRRFFDPAAKAAGLEDLSP-------- 299 Query: 383 RGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGAL 436 HDLRHT A L +++G + V + LGH++ +TLD Y + D GAL Sbjct: 300 -----HDLRHTAASLLVASGANVKAVQRMLGHASAAMTLDVYSGLF-DDDLGAL 347 >tr|Q1ATW8|Q1ATW8_RUBXD Tax_Id=266117 SubName: Full=Phage integrase;[Rubrobacter xylanophilus] Length = 378 Score = 86.3 bits (212), Expect = 8e-15 Identities = 104/422 (24%), Positives = 162/422 (38%), Gaps = 61/422 (14%) Query: 9 TKQKRNGK-ALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDELNAARHTT 67 TK++ NG+ ++ R+ VR P+G R E RD+L A Sbjct: 2 TKRRGNGEGSISRHPKRDLWMVRYTVETPSGTKRKTAYGKTRAEV----RDKLAKAMSDR 57 Query: 68 GTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTA 127 L + + + G + WL +G ++Q T D Y+ +R ++ LG Sbjct: 58 ADGLLYDDKN---MTVGEYLDRWLKGSV----RGSVRQSTFDRYEIAVRVHLKPALGRHK 110 Query: 128 VAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTD 187 + +TPAH AL + P +V + L + L A+ + N + Sbjct: 111 LRKLTPAHVAALYQDRLDAG--------YAPASVNKLHVTLHKALDQAVRWHMVPRNVAE 162 Query: 188 RVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRA 247 V A R T AR E L++ + RL A RGD TG+R Sbjct: 163 VV--KAPRPT---AREEMRTLSAGETRRLLEAARGD--------RLEALYVLAVTTGMRQ 209 Query: 248 AEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMAD 307 E+ L+ D+ +V+VRRT + G + G K+ K RRT+ L + + + Sbjct: 210 GELLALKWQDVDL---ENATVSVRRTITKSGGRLLLGEPKTSKGRRTIHLTGPAVQALRE 266 Query: 308 YLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAV 367 +L+ + ++ G +R +G + + + P L+ Sbjct: 267 HLSRQ----------MQEIQHLGDLYRDEG--FIFTSESGTLINPSNLRQRSFTPLLKKA 314 Query: 368 ALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDY 427 LP +R HDLRHT A L LS H V + LGHS +TLDTY Sbjct: 315 RLPQ-------------IRFHDLRHTCATLLLSRNVHPKYVQELLGHSNIAITLDTYSHV 361 Query: 428 IP 429 IP Sbjct: 362 IP 363 >tr|C0U2C7|C0U2C7_9ACTO Tax_Id=526225 SubName: Full=Site-specific recombinase XerD;[Geodermatophilus obscurus DSM 43160] Length = 319 Score = 86.3 bits (212), Expect = 8e-15 Identities = 92/330 (27%), Positives = 131/330 (39%), Gaps = 68/330 (20%) Query: 103 LKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVK 162 +K T+ Y LLRT++ T G +A +T A + L+ Q S GTV+ Sbjct: 1 MKPSTLYRYGNLLRTHVLPTWGKHQLADVTHADVAVWVAKLLGQGS--------AAGTVR 52 Query: 163 HVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRL--AAAI 220 V +L A+ G I NP +RV R RF LT ++V RL AA Sbjct: 53 QAHRVFSLLLGLAVRDGRIPRNPAERVPL--PRVIRSEPRF----LTHDEVERLADAAGA 106 Query: 221 RGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGA 280 GD+ + +AYTGLR E++ L V + F R + + G Sbjct: 107 EGDV------------IRLLAYTGLRFGEMAALRVRRVDFL---RRRLTIAEAVTEVGGR 151 Query: 281 WITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRY 340 GT K+ + +RTVPLP LAE +A R G +G Sbjct: 152 LEFGTPKTHQ-QRTVPLPATLAEPLA-------------------RRCEG----KQGDDL 187 Query: 341 AVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLS 400 V L + + + PA+ A L P HDLRHT A L +S Sbjct: 188 LVTTASGTVLRLRNWRRVVFDPAVRAAGLSDVTP-------------HDLRHTAASLAVS 234 Query: 401 AGTHFMQVSKWLGHSTFTLTLDTYGDYIPE 430 +G V + LGH++ +TLD Y + + Sbjct: 235 SGATVKAVQRMLGHASAAMTLDVYSGLVDD 264 >tr|A5FQU2|A5FQU2_DEHSB Tax_Id=216389 SubName: Full=Phage integrase family protein;[Dehalococcoides sp.] Length = 368 Score = 85.9 bits (211), Expect = 1e-14 Identities = 93/331 (28%), Positives = 135/331 (40%), Gaps = 52/331 (15%) Query: 103 LKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKK-PLTPGTV 161 L RT + Y+ ++R YI LG +A + P H + Q S GDK L+P TV Sbjct: 83 LAPRTAEGYEHIIRRYIIPGLGKIQLAQLKPEHIQKY---YANQLSIGGDKGIGLSPRTV 139 Query: 162 KHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIR 221 +H L L+ A+ ++ NP D +D + + E H LT E V ++ Sbjct: 140 RHHHMCLHSALKTAVKWELLIRNPLDAIDPPRCQ------KHEMHTLTEEAVHKVL---- 189 Query: 222 GDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLE--VGDLVFAPEPRCSVNVRRTKD-RKN 278 +IA F TGLR +E+ L+ DL+ C ++V R+ Sbjct: 190 -EIANETPYFTLFYLALF---TGLRRSELLALKWSAVDLIM-----CQLSVSRSLHVLSG 240 Query: 279 GAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQ 338 G IT K+ +S R+V L P + + D+ D +A + A G H Sbjct: 241 GEIITRQTKTARSTRSVALSPSTVQVLKDH--RDKQQAFKILA---------GSHLNNDD 289 Query: 339 RYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQ 398 +D +PL T +K + G+RLHD RHT A L Sbjct: 290 FIFTNID-GKPLLPNTITHNWIKLIRKT--------------GLNGIRLHDARHTHASLM 334 Query: 399 LSAGTHFMQVSKWLGHSTFTLTLDTYGDYIP 429 L G H V + LGHS+ +TLDTY P Sbjct: 335 LKQGVHPKIVQERLGHSSIQVTLDTYSHVTP 365 >tr|A8CPL1|A8CPL1_9CHLR Tax_Id=311424 SubName: Full=Phage integrase family protein;[Dehalococcoides sp. VS] Length = 385 Score = 84.7 bits (208), Expect = 2e-14 Identities = 97/360 (26%), Positives = 136/360 (37%), Gaps = 53/360 (14%) Query: 84 GYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTAL 143 G F WL+ A RT + Y +++R ++ LG + + P H +A + Sbjct: 67 GTFLESWLETYA----SCNTAPRTFERYSQIVRLHLTPNLGRIELTQLRPEHIQAYYSKA 122 Query: 144 VRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARF 203 + G L+ TVKH VL L +A+ G + N VD + Sbjct: 123 LSGGRVSGGG--LSAQTVKHHHRVLSEALNHAVKWGLLARNVAMAVDPPRPE------KR 174 Query: 204 EHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMA--YTGLRAAEVSGLEVGDLVFA 261 E H + E + L + A + FM +TG+R E+ L D+ A Sbjct: 175 EMHTIAPEDMSVLFE----EAAKMEKNSGLPYELIFMTALHTGMRRGEILALRWSDIDLA 230 Query: 262 PEP---RCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANE 318 RCS+ KNG I K+ SRR V + P L E++ H ++ Sbjct: 231 KSKIYVRCSLQCL-----KNGEIIIREPKTPGSRRLVSMTPSLLEKLII-----HKESSS 280 Query: 319 PTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKD 378 L G +G P+ T V PA +A A Sbjct: 281 ANMILQ-------GKTLQGDSLVFAHFDGTPINPNT-----VSPAFAKIAKRAGL----- 323 Query: 379 APATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGALNT 438 +RLHDLRH+ A L L+AG H VS+ LGHST TLDTY IP A T Sbjct: 324 -----NLRLHDLRHSHATLMLTAGVHPKIVSERLGHSTVAFTLDTYSHVIPGLQDAAAKT 378 >tr|C8XES3|C8XES3_NAKMY Tax_Id=479431 SubName: Full=Integrase family protein;[Nakamurella multipartita] Length = 368 Score = 84.3 bits (207), Expect = 3e-14 Identities = 106/382 (27%), Positives = 139/382 (36%), Gaps = 68/382 (17%) Query: 36 PTGQTRARQESYPTREAAEA-RRDELNAARHTTGTSALAEQRKAGELPFGYFARGWLDAQ 94 P Q ++ TRE AEA DE T + FG +A WL A+ Sbjct: 25 PDTQLHNAPSTFETREDAEAWLTDERRLIAAGTWAPPAHRTKTIEHRTFGDYATDWLTAR 84 Query: 95 ALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKK 154 +K RT Y LL I + + ITP A T L GD Sbjct: 85 PIK-------PRTRSHYAMLLDKLILPGFESSPLKTITPDQVRAWHTRL-------GDS- 129 Query: 155 PLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVG 214 TP H + +LR +L A+H G I NP R G+ R H + + Sbjct: 130 --TPTLRAHAYSLLRAILTDAVHDGIIPANPAH------IRGAGNAKRV--HKIKPASLA 179 Query: 215 RLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTK 274 L G + G A+ GLR E++ L D+ ++VRR Sbjct: 180 EL-----GVLVGAMPDAKYQLMTLLAAWCGLRFGELTELRRSDI---DAKNGVIHVRRGV 231 Query: 275 DRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHR 334 R +G I GT KS R V +PP L + DYL + N L+P+ +G H Sbjct: 232 VRTDGEVIVGTPKSAAGHRDVNIPPHLLPAVRDYLKAN---VNGRDGLLFPAA-DGVSHL 287 Query: 335 AKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTF 394 A Y V FY PA K A +R HDLRHT Sbjct: 288 APSSLYRV------------FY-----------------PARKKA-GRPDLRWHDLRHTG 317 Query: 395 AVLQLSAGTHFMQVSKWLGHST 416 AVL + G ++ LGHST Sbjct: 318 AVLAAATGASLAELMGRLGHST 339 >tr|D1BL69|D1BL69_9FIRM Tax_Id=479436 SubName: Full=Integrase family protein;[Veillonella parvula DSM 2008] Length = 403 Score = 82.4 bits (202), Expect = 1e-13 Identities = 84/350 (24%), Positives = 134/350 (38%), Gaps = 43/350 (12%) Query: 98 VAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLT 157 V + +K +T +YD LR YI LG +A+ITP + +L + ++ Sbjct: 84 VKKVSVKPKTFQKYDSTLRLYILPLLGEIKIASITPQQVQTVLNNWSNGTLKGKKGHIIS 143 Query: 158 PGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLA 217 T++ L + YA++ G ++ NP T E H L+ +++ +L Sbjct: 144 SSTIRCTRRYLSELFEYAVNIGLLLKNPIKLTKAPRLITT------EIHTLSLDEIHQLT 197 Query: 218 AAIRGDIAG------XXXXXXXXXXVEFMAYTGLRAAEVSGL--EVGDLVFAPEPRCSVN 269 + ++ ++ + TG+R EV GL + DL+ ++ Sbjct: 198 STMKQQVSNNISSPYRINYYSSYIATKIALGTGMRLGEVFGLCWDCVDLIHG-----HIS 252 Query: 270 VRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNN 329 VRRT I K+K SRR +P+ L + Y A E Sbjct: 253 VRRTIQTGTKGQIFQDTKTKTSRRCIPISQELQSELTTYKEFQSNYAKEL---------- 302 Query: 330 GGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHD 389 G + + + L+ F P L+ + L + HD Sbjct: 303 -GDKWTDSYGVVISGTFGKILSTSNFKSRYFIPILKQLNLD-------------HITFHD 348 Query: 390 LRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGALNTL 439 LRHT A L LS + V + LGHST TLTLDTY +P+ A+ L Sbjct: 349 LRHTHATLLLSQKINPKIVQERLGHSTITLTLDTYSHLVPDIQKEAVKAL 398 >tr|A0QET6|A0QET6_MYCA1 Tax_Id=243243 SubName: Full=TraSA:integrase fusion protein;[Mycobacterium avium] Length = 382 Score = 81.6 bits (200), Expect = 2e-13 Identities = 103/420 (24%), Positives = 162/420 (38%), Gaps = 85/420 (20%) Query: 13 RNGKALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDELNAARHTTGTSAL 72 R+G+ ++ WR + D+ Q+R S+ + A+ DE+ AA TG Sbjct: 22 RHGRGMR-----WRATYVDD------QSREHSRSFGRKVDAQRWLDEVTAAV-VTGQYV- 68 Query: 73 AEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAIT 132 KAG++ F +A W Q + + + +LR + + TLG + +I Sbjct: 69 --DPKAGQITFRDYAERWRKMQVQRPSSRA-------HIETMLRRHAYPTLGDRQLTSIL 119 Query: 133 PAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFS 192 P+ +A + L L P TV V ++ V++ A+ + NP D Sbjct: 120 PSDVQAWVKGL-----------QLAPATVGVVHGLVSTVMKSAIRDRRLAANPCDGTKLP 168 Query: 193 ASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSG 252 + R + PLT+EQV + A + ++ V A TGLR E G Sbjct: 169 KVQ------RPQIVPLTTEQVEAVRAELPAELQA---------LVTLAAGTGLRQGECFG 213 Query: 253 LEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATD 312 L V + F R R+ A G K++ S R +PLP +A+ +A +LA Sbjct: 214 LTVDRVRFL--ERVLTVDRQLVTVAGQAPTFGPPKTRASNRAIPLPKVVADALAAHLAA- 270 Query: 313 HPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPAS 372 +P+ +G +G +P+ TF Sbjct: 271 -----------FPAEPDGLVFTQQG----------KPITRSTFG-------------YRW 296 Query: 373 RPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQD 432 R A K+A G H LRH +A L + G V LGH++ TLDTY P+ D Sbjct: 297 RAAVKEAKLPHGTGFHALRHYYASLLIRHGESVKTVQARLGHASAVETLDTYSHLWPDSD 356 >tr|Q252J3|Q252J3_DESHY Tax_Id=138119 SubName: Full=Putative uncharacterized protein;[Desulfitobacterium hafniense] Length = 395 Score = 79.7 bits (195), Expect = 7e-13 Identities = 105/388 (27%), Positives = 154/388 (39%), Gaps = 72/388 (18%) Query: 44 QESYPTREAAEARRDELNAARHTTGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKL 103 QE REA E R+++ R+ ++ F + + WL +A+ Sbjct: 39 QEEKERREAEERAREQIEGKRNPQA-----------DVLFTDYLQKWLTQAKPTIAKTTF 87 Query: 104 K--QRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTV 161 K Q +D T + TLG +TP H + ++ + TP TV Sbjct: 88 KGYQTMLDGRISRYFTELNITLG-----EVTPQHIQDFHQSIFDEGH--------TPNTV 134 Query: 162 KHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIR 221 H VLRR L+ A+ I +NP DRVD + HA+F ++E++ L I Sbjct: 135 IHYHAVLRRALQNAVKKEIIDSNPADRVD--RPKKNVYHAQF----YSAEEMMALFDEIS 188 Query: 222 GDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVN---VRRTKDRKN 278 D V+ AY GLR +EV GL+ D + + S+ + T D K+ Sbjct: 189 DD--------PLEICVKLAAYYGLRRSEVLGLK-WDAINLEQKTISIKHKVIEDTVDGKS 239 Query: 279 GAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQ 338 A LK+K S RT+PL P + L E L+ R+ + Sbjct: 240 IAVGEDVLKTKSSFRTLPLLP-----SVEKLLLAEKEKQEMYRKLF--------KRSYCR 286 Query: 339 RYA--VPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAV 396 Y + LD + L + ALE L + +R HDLRH+ A Sbjct: 287 DYLDYICLDQAGKLMRPNYVTEHFSWALEKADL-------------KKIRFHDLRHSCAS 333 Query: 397 LQLSAGTHFMQVSKWLGHSTFTLTLDTY 424 L L+ G Q+ WLGHSTF+ T D Y Sbjct: 334 LLLANGISMKQIQIWLGHSTFSTTADIY 361 >tr|Q1B7V4|Q1B7V4_MYCSS Tax_Id=164756 SubName: Full=Phage integrase;[Mycobacterium sp.] Length = 379 Score = 79.0 bits (193), Expect = 1e-12 Identities = 92/354 (25%), Positives = 141/354 (39%), Gaps = 57/354 (16%) Query: 90 WLDA-QALKVAQGKLKQRTVDEYDRLLRTYIFDT-LGGTAVAAITPAHCEALLTALVRQA 147 WL +A +A K+ T Y L R ++ +G + + P+ E L+ L Sbjct: 73 WLKQWRASSLAASDRKETTKSLYATLSRKHLEGARIGDKRLDRLKPSDVELLIVQL---- 128 Query: 148 SRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHP 207 K L+ TV+ V+ VLR+ L A+ G + NP +V AR E Sbjct: 129 ----RGKNLSDSTVRQVYTVLRQALDVAVRDGLLAANPASKVKRPGV------ARKEAKY 178 Query: 208 LTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCS 267 L + V RL A +G V MA TGLR EV+GL D+ + Sbjct: 179 LPAADVARLLDAAKG--------LRYYLGVVLMATTGLRRGEVAGLLWSDVDL---EKGE 227 Query: 268 VNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSR 327 + VR T R +G + K+ +SRR VPL + ++ + T + W R Sbjct: 228 LTVRHTLSRVDGKLVLTEPKTDRSRRRVPLHAGVVAQLKMH-RTQQLQERLAAGDQW--R 284 Query: 328 NNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKP--ALEAVALPASRPATKDAPATRGV 385 + G + T + T++ P L V + A++ +D A Sbjct: 285 DTGA-------------------VLATEFGTLLDPRNLLRTVEIAAAKVGIEDVGA---- 321 Query: 386 RLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGALNTL 439 H +RH+ AV L +G H + LGHS+ +T D YG E A++ L Sbjct: 322 --HTMRHSAAVAWLESGVHIKAAADLLGHSSIAITGDLYGHTSDETARAAVDGL 373 >tr|A1UH53|A1UH53_MYCSK Tax_Id=189918 SubName: Full=Phage integrase family protein;[Mycobacterium sp.] Length = 379 Score = 79.0 bits (193), Expect = 1e-12 Identities = 92/354 (25%), Positives = 141/354 (39%), Gaps = 57/354 (16%) Query: 90 WLDA-QALKVAQGKLKQRTVDEYDRLLRTYIFDT-LGGTAVAAITPAHCEALLTALVRQA 147 WL +A +A K+ T Y L R ++ +G + + P+ E L+ L Sbjct: 73 WLKQWRASSLAASDRKETTKSLYATLSRKHLEGARIGDKRLDRLKPSDVELLIVQL---- 128 Query: 148 SRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHP 207 K L+ TV+ V+ VLR+ L A+ G + NP +V AR E Sbjct: 129 ----RGKNLSDSTVRQVYTVLRQALDVAVRDGLLAANPASKVKRPGV------ARKEAKY 178 Query: 208 LTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCS 267 L + V RL A +G V MA TGLR EV+GL D+ + Sbjct: 179 LPAADVARLLDAAKG--------LRYYLGVVLMATTGLRRGEVAGLLWSDVDL---EKGE 227 Query: 268 VNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSR 327 + VR T R +G + K+ +SRR VPL + ++ + T + W R Sbjct: 228 LTVRHTLSRVDGKLVLTEPKTDRSRRRVPLHAGVVAQLKMH-RTQQLQERLAAGDQW--R 284 Query: 328 NNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKP--ALEAVALPASRPATKDAPATRGV 385 + G + T + T++ P L V + A++ +D A Sbjct: 285 DTGA-------------------VLATEFGTLLDPRNLLRTVEIAAAKVGIEDVGA---- 321 Query: 386 RLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGALNTL 439 H +RH+ AV L +G H + LGHS+ +T D YG E A++ L Sbjct: 322 --HTMRHSAAVAWLESGVHIKAAADLLGHSSIAITGDLYGHTSDETARAAVDGL 373 >tr|C7MYH0|C7MYH0_SACVD Tax_Id=471857 SubName: Full=Site-specific recombinase XerD;[Saccharomonospora viridis] Length = 402 Score = 77.8 bits (190), Expect = 3e-12 Identities = 118/441 (26%), Positives = 172/441 (39%), Gaps = 72/441 (16%) Query: 9 TKQKRNGKALKRYEVVWRESVRDEFGLPTGQT-RARQESYPTREAAEARRDELNAARHTT 67 TK+ + +A+K+ + + R + QT + R E T+ AE RR EL AA Sbjct: 10 TKKAKYREAVKKAKSLGRRPPARWEVMYYDQTGKLRSEVAATKARAEQRRTELEAA---L 66 Query: 68 GTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTA 127 T + A ++ F A WL+++ L+ T +Y LL T++ G Sbjct: 67 STDTYVDPTTA-KVSFAEVADKWLESRH------DLRPSTWWKYRGLLDTHVNVRWGDVQ 119 Query: 128 VAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTD 187 + AI A L +L++ + G L P +H + VL VL + + ++ NP + Sbjct: 120 LRAIRSEDIAAWLGSLLKSRTEGGSG--LGPSQARHAFRVLSMVLDWCVP-AKLLRNPAE 176 Query: 188 RVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVE-----FMAY 242 V T EH L+ EQV RLA A GD+ V +AY Sbjct: 177 GVKLPVRPET------EHVYLSFEQVERLANAA-GDLRTKYGRPTASASVNRALILLLAY 229 Query: 243 TGLRAAEVSGLEVG--DLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPW 300 TGLR E + L VG DLV + + V T NG G KS K RTV +PP Sbjct: 230 TGLRWGEAAALRVGRVDLV-----KRRIRVVSTFYELNGVQHEGPPKSGK-HRTVAIPPS 283 Query: 301 LAERMADYLA--TDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDT 358 L + + DH L + G RA R Sbjct: 284 LVPELKQVIGGRGDH--------ELVFTTARGASLRANNWRVRE---------------- 319 Query: 359 IVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFT 418 PA++ L G+ H LRHT A L ++AG + LGH+ Sbjct: 320 -FNPAVKLAKLDG-----------LGLTPHKLRHTAASLAIAAGADVKVLQHMLGHADAA 367 Query: 419 LTLDTYGDYIPEQDGGALNTL 439 +TL+ YG P++ +TL Sbjct: 368 MTLNIYGHLFPDRLDEVADTL 388 >tr|A1HTM7|A1HTM7_9FIRM Tax_Id=401526 SubName: Full=Phage integrase family protein;[Thermosinus carboxydivorans Nor1] Length = 393 Score = 77.8 bits (190), Expect = 3e-12 Identities = 98/415 (23%), Positives = 159/415 (38%), Gaps = 61/415 (14%) Query: 10 KQKRNGKALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDELNAARHTTGT 69 + K G +R + +W ++ TG+ + T+ A+ +RD L A Sbjct: 5 RAKGEGSIYQRNDGLWVAAIVVGRNADTGKPVRKVVYARTKAEAKQKRDALAAQYEA--- 61 Query: 70 SALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVA 129 A A ++ G + WLD A + + T D Y+R+ R ++ +G ++ Sbjct: 62 ---AYYVDADKITVGDWLAKWLDVYA----RPAVAPSTYDWYERICRVHLIPAIGHLRLS 114 Query: 130 AITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRV 189 + + LL +LV + TV+ V VL LR A HG + T PTD V Sbjct: 115 RLQQMAVQQLLNSLVDAGK--------SARTVQAVHSVLAMALRVARKHGLLRTLPTDDV 166 Query: 190 DFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAE 249 R + + PLT ++ L A A VE+ TGLR E Sbjct: 167 AVPQVR------KQDKRPLTPDEWDALLTA-----AQTAPDIFAALVVEWA--TGLRRGE 213 Query: 250 VSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYL 309 + GL D+ F RC +NVRR + G + K++ ++R +P+P + + + + Sbjct: 214 LLGLMWDDIDF---DRCLINVRRAVQIRRGGCVLADPKTEATKRVLPVPKEVMQVLRAHR 270 Query: 310 ATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVAL 369 A + P W ++ G G P +WS+ A I K Sbjct: 271 AR-QMQCRLAAGPAW--QDCGLVFPTSGGTLYDPRNWSKRFA------RIAK-------- 313 Query: 370 PASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTY 424 A + +H LRH ++AG + LGH+T + LD Y Sbjct: 314 ----------AAGLDIGVHHLRHDLTSRIVAAGAPVKEAQYRLGHATVKMLLDVY 358 >tr|B2HGZ7|B2HGZ7_MYCMM Tax_Id=216594 SubName: Full=Prophage integrase;[Mycobacterium marinum] Length = 385 Score = 77.4 bits (189), Expect = 4e-12 Identities = 114/431 (26%), Positives = 164/431 (38%), Gaps = 81/431 (18%) Query: 10 KQKRNGKALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDELNAARHTTGT 69 +++ N RY+V R VRD P+G REA + D G Sbjct: 10 RKRTNSAGQARYQV--RYLVRDP-NSPSGWVETSSTFATMREARAFKADR-------DGE 59 Query: 70 SALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVA 129 +A+ +R L + W A K Q + +T Y + I G V Sbjct: 60 AAIGARRFDPRLGRASLSAIWTQYSASK--QPAVSPKTWSGYAQHWELRISPRFGHVPVD 117 Query: 130 AITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRV 189 I+ + + L + P +LR +L A G I NP V Sbjct: 118 EISRKDVQQFIGGLT-----------VGPWAKLATLRLLRSILDMAREDGRIHINPAQGV 166 Query: 190 DFSASRATGDHARFEHHPLTSEQVGRLAAAI--RGDIAGXXXXXXXXXXVEFMAYTGLRA 247 S+ R AR H L++ +V LA A +GDI V +A+TGLR Sbjct: 167 --SSGRIP---ARERHRYLSATEVAALAHACGDQGDI------------VTILAFTGLRW 209 Query: 248 AEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMAD 307 +E+ GL VGD+ + VR+ G I G K++ + RTVPLP + + + Sbjct: 210 SELVGLRVGDIDLKAR---RLYVRQAAPDVEGRIIVGPPKTRAAVRTVPLPRIVIDALKP 266 Query: 308 YLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAV 367 + + T+P NGG R+ R W++ AL+ Sbjct: 267 RIENRSTKEQAITSP------NGGFLRSNNWRRHT--HWNK--------------ALKKT 304 Query: 368 ALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGD- 426 L AP T +HDLRHT+A L +G V K +GHST T+T + Y D Sbjct: 305 GL---------APLT----IHDLRHTYASLARKSGADLRYVQKTMGHSTPTVTANIYSDL 351 Query: 427 YIPEQDGGALN 437 Y E D A N Sbjct: 352 YSDELDHVATN 362 >tr|Q9RX02|Q9RX02_DEIRA Tax_Id=1299 SubName: Full=Integrase, putative;[Deinococcus radiodurans] Length = 444 Score = 75.9 bits (185), Expect = 1e-11 Identities = 108/428 (25%), Positives = 160/428 (37%), Gaps = 74/428 (17%) Query: 36 PTGQTRARQESYPTREAAEARRDELNAARHTTGTSALAEQRKAGEL----PFGYFARGWL 91 P G+ R R + T A E R A T A+ E +A E P L Sbjct: 23 PAGRVRWRVMT--TTPAGERRHVTGTARNMTAAREAVREALRAAERDTLPPRERVTVEQL 80 Query: 92 DAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQG 151 + ++ LK RTV+ Y LLR I +LG +TP A A ++ + QG Sbjct: 81 VSAYIEHRAPSLKGRTVENYRALLRRNISPSLGQLKAQGVTPQRLRAFYDA--QREAGQG 138 Query: 152 DKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDR-----VDFSASRATGDHARFEHH 206 D + ++L L G + NP R V+ A+R Sbjct: 139 DS------VRRQTHNLLNAAYLLGLTDGVVTVNPAARARPVYVERGAARVKA-------- 184 Query: 207 PLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPR- 265 T ++ R AA R D G + FM TGLR E GL D+ Sbjct: 185 -FTPDEAARFYAAARADRWGWP--------LAFMLATGLRPGEALGLTWADVTMRGSAEG 235 Query: 266 ----CSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTA 321 V++ RT+ G T K+++ RR++ + A + D A A Sbjct: 236 GTLAAVVHIERTRSVSGGRVYEDTPKTERGRRSLTVTGDAARLLLDARAQAEREAGARL- 294 Query: 322 PLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFY--DTIVKPAL---EAVALPASRPAT 376 R+NG +++ G + GT Y D + +P +AV +P P Sbjct: 295 -----RHNGREYQSTGYVFVT--------RAGTPYRPDNLRRPMARLCQAVGVPVLTP-- 339 Query: 377 KDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGAL 436 H LRHT+A +Q +AG +S LGH+ + T DTY ++ E + +L Sbjct: 340 -----------HKLRHTWASVQAAAGVPVEVLSAELGHAAPSFTRDTY-RHVYESERASL 387 Query: 437 NTLPEPPA 444 P PA Sbjct: 388 TYDPLTPA 395 >tr|Q0REL9|Q0REL9_FRAAA Tax_Id=326424 (int)SubName: Full=Integrase (Recombinase);[Frankia alni] Length = 442 Score = 75.5 bits (184), Expect = 1e-11 Identities = 110/441 (24%), Positives = 158/441 (35%), Gaps = 88/441 (19%) Query: 25 WRESVRDEFGLPTGQTRARQESYPTR-EAAEA----RRDELNAARHTTGTSALAEQRKAG 79 WR +V + G G+ + + S TR E AE R + + + TG L + Sbjct: 40 WRATV--DLGWKDGKRQRKYLSGKTRTEVAEKLRTLHRQQEDGVKVVTGNKPLTVDQ--- 94 Query: 80 ELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEAL 139 + WLD +A K++ T+ Y +R I LGG + + P H E+ Sbjct: 95 ------WLTFWLDT----IASRKVRPSTLATYRGYVRNRIVPELGGYRLDRLEPEHLESF 144 Query: 140 LTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGD 199 A + L P TV + ++ R L+ A G + N VD + Sbjct: 145 YAAC--------ESDGLAPATVLQMHRIISRALKIAHRRGKVARNVATLVDAPTVQ---- 192 Query: 200 HARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGL--EVGD 257 R E PL++++ A A+ G + GLR E GL D Sbjct: 193 --RDEVSPLSAKE----ARAVLDTAKGGRNPARWSVALAL----GLRQGEALGLPWNAVD 242 Query: 258 LVFAP-------------------EPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLP 298 L P +P+ RR R G + KS+ RRT+ LP Sbjct: 243 LDSTPATLTVRQALQRRAWAHGCTDPKSCGLARRCPQRTGGGLVIVHPKSRAGRRTIVLP 302 Query: 299 PWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDT 358 LA + + + A E W RN G Q P+D P A + Sbjct: 303 AGLAADLRAHRSAQQQEAEEAGTG-W--RNEHG--LVFTQPTGHPID---PSADHRAWKN 354 Query: 359 IVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFT 418 ++K A R RLHD RHT A L L+ H V + +GHS + Sbjct: 355 LLKAA-----------------GVRAARLHDARHTMASLLLAQKVHPRVVMEIMGHSQIS 397 Query: 419 LTLDTYGDYIPEQDGGALNTL 439 LTL TY PE A N + Sbjct: 398 LTLGTYSHVAPELSTDAANQM 418 >tr|A1WV14|A1WV14_HALHL Tax_Id=349124 SubName: Full=Phage integrase family protein;[Halorhodospira halophila] Length = 384 Score = 75.1 bits (183), Expect = 2e-11 Identities = 92/369 (24%), Positives = 147/369 (39%), Gaps = 74/369 (20%) Query: 77 KAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHC 136 +A + FG +A W G K+ +L Y+ G + IT Sbjct: 80 RAPDQRFGPYAWQWYQLHL-----GDWKESYARRVCGVLEGYLIPHFGEWPLDQITERAV 134 Query: 137 EALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRA 196 A L+ + +G+++ L+ + + L V+R+A I +P ++ R Sbjct: 135 RAFRHELLELTNARGERR-LSNARINFILTPLAGVMRFAESELGI-EHPMRQI-----RP 187 Query: 197 TGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVG 256 D R + PLT+EQV AA+ D + YTGLR+ EV GL+V Sbjct: 188 LRDD-RDDPMPLTAEQVHAFLAAVDPDY---------YLYFKLRFYTGLRSCEVDGLKV- 236 Query: 257 DLVFAPEPRCSVNVRRTKDRKNGAWITG---TLKSKKSRRTVPLPPWLAERMADYLATDH 313 C V++ R + R A + G TLK +K+RR +PL P LA + ++ Sbjct: 237 ---------CYVDLERRQLRVREARVDGRQTTLKHRKTRRDIPLSPGLAAELDRHI---- 283 Query: 314 PRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASR 373 +G Y +PL + + KP L+A+ L Sbjct: 284 -------------------RGRQGDDYVFTRSDGRPLHPSWVAEQVWKPTLKALGL---- 320 Query: 374 PATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPE--- 430 AP R++ RHT AVL L+AG + + VS+ LGHS+ + + Y ++ Sbjct: 321 -----APR----RVYQTRHTAAVLHLAAGENPLFVSRLLGHSSTKMLFERYAPFVANALG 371 Query: 431 QDGGALNTL 439 DG A + Sbjct: 372 DDGSAFEAM 380 >tr|D1BBK2|D1BBK2_9MICO Tax_Id=446469 SubName: Full=Site-specific recombinase XerD;[Sanguibacter keddieii DSM 10542] Length = 370 Score = 75.1 bits (183), Expect = 2e-11 Identities = 107/406 (26%), Positives = 151/406 (37%), Gaps = 104/406 (25%) Query: 54 EARRDELNAARHTTGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEY-- 111 + RRD + T ++ E + +L G W+D +A + + +DEY Sbjct: 17 DGRRDVASKTFDTKRSAQAWEAEQKAKLSGG----AWVDPKAGRTPV----REVIDEYLA 68 Query: 112 -------------DRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTP 158 + LL + LG V+A+T E + T L QA L Sbjct: 69 TRPGIVSSKTLLTEHLLLGKVTPALGRLPVSAVTR---EDVQTDLGVQALG------LAT 119 Query: 159 GTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAA 218 +VK +L + Y++ TNP S A G H R E P T E++ +AA Sbjct: 120 SSVKRYRGILSALFTYSVARRLRETNPVSGTKLP-SGAEG-HERTEMAPYTLEELREVAA 177 Query: 219 AIR-----GDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRT 273 A GDI F+ TGLR E++ L V D++ P +R + Sbjct: 178 ACMEQSPDGDIT------------LFLGLTGLRWGEMAALRVKDVLEVPRRA----IRVS 221 Query: 274 KDRKNGAWITGTLKSKKSRRTVPLPP--W--LAERMADYLATDHPRANEPTAPLWPSRNN 329 + G I T K + R VPL W +A RM D N P+ +W Sbjct: 222 RSAPTGHAIRETTKGGRDR-FVPLVEDVWQIVARRMVGRAPDDLLFVN-PSGRIWG---- 275 Query: 330 GGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHD 389 G + + W+Q RG R+HD Sbjct: 276 -------GWNWKCGVSWAQH--------------------------------ARGRRVHD 296 Query: 390 LRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQDGGA 435 LRHT A L LS+G V WLGHST T+TLD Y Y+P + A Sbjct: 297 LRHTAATLWLSSGVPPKTVQAWLGHSTATMTLDLYAHYLPASEADA 342 >tr|A3Q3G1|A3Q3G1_MYCSJ Tax_Id=164757 SubName: Full=Phage integrase family protein;[Mycobacterium sp.] Length = 387 Score = 73.6 bits (179), Expect = 5e-11 Identities = 98/412 (23%), Positives = 154/412 (37%), Gaps = 87/412 (21%) Query: 27 ESVRDEFG----LPTGQTRARQ----------ESYPTREAA----EARRDELNAARHTTG 68 E R FG LP+G+ +A ++PT+ +A +A D ++ R G Sbjct: 11 ERTRRSFGRMRQLPSGRWQASYLHNGAVYKALATFPTKSSAGHWLQAEEDLIDLDRRRPG 70 Query: 69 T----SALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLG 124 + A +R+A +L +A+ WLD + KL +RT D Y L +I LG Sbjct: 71 EWTPPAERAARRQAEKLTLRTYAKTWLDNKT------KLARRTRDNYRGHLDNHILPVLG 124 Query: 125 GTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTN 184 +A ITP H L + + + + +L V A+ I N Sbjct: 125 DLGLAEITPEHVRTWFAGLGTEHDTRNAQ----------AYAILNGVFNTAVADDLIERN 174 Query: 185 PTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTG 244 P R+ +A HA+ L + Q+ LAAA+ D V + Sbjct: 175 PC-RIKGAAQVK---HAKRSVVLLDAAQLTELAAAMPDDAR---------LAVLLAGWCA 221 Query: 245 LRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAER 304 LR EV L D+ +V + R + G + G K+++SRR V +PP + Sbjct: 222 LRKGEVFALRRCDIA---ADGSTVRIERAVTYREGKFEVGPTKTRESRRVVSVPPHVRPA 278 Query: 305 MADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPAL 364 + D+LA +E PS + G + + T + A Sbjct: 279 VVDHLARHVGEGDEALVFTEPSTGSFAGEKR--------------------FRTAWEAAR 318 Query: 365 EAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHST 416 EA+ P + HDLRH V+ AG +V LGH++ Sbjct: 319 EAIGQPQ-------------LHFHDLRHAGGVMAAQAGATLREVMDRLGHTS 357 >tr|B9MQ70|B9MQ70_ANATD Tax_Id=521460 SubName: Full=Integrase family protein;[Anaerocellum thermophilum] Length = 325 Score = 73.2 bits (178), Expect = 7e-11 Identities = 88/348 (25%), Positives = 139/348 (39%), Gaps = 58/348 (16%) Query: 83 FGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTA 142 FG WLD + + KL+ T Y +L+ +I LG + ++P + + Sbjct: 9 FGLTFSQWLDIWMNQFMKIKLRPTTYSSYIQLINKHIKPKLGHIQLQNLSPLAIQECYNS 68 Query: 143 LVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHAR 202 L+ + L+P TVK++ ++ L+ A+ G I N ++ V A R Sbjct: 69 LLLE--------NLSPKTVKNIHVIIHSALKQAIKCGYINQNVSEAV------ALPKVER 114 Query: 203 FEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAP 262 E L+SEQV A + D YTGLR E+ GL+ D+ F Sbjct: 115 PEIKTLSSEQVTTFLQAAQTD--------SLYPAFLLELYTGLRRGELLGLKWDDIDF-- 164 Query: 263 EPRCSVNVRRTKDR------KNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRA 316 C+++V+R+ R K + K+K R +P+P ++ + + L +H R Sbjct: 165 -DNCTIHVKRSLVRVYDHNLKKTTLLLQPPKTKAGYRVIPIPDFVVAELKE-LYEEHQRI 222 Query: 317 NEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPAT 376 + + P + S N P+D ++ K L+ LP Sbjct: 223 -KLSQPNFNSLN-----LMFVTTQGTPIDPRN-------FERKFKQLLKKANLP------ 263 Query: 377 KDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTY 424 +RLHDLRHT A L L H V + LGH + TLD Y Sbjct: 264 -------NIRLHDLRHTVATLLLQQNVHPKIVQEILGHRDISTTLDIY 304 >tr|C1YHL2|C1YHL2_NOCDA Tax_Id=446468 SubName: Full=Site-specific recombinase XerD;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 422 Score = 73.2 bits (178), Expect = 7e-11 Identities = 112/452 (24%), Positives = 182/452 (40%), Gaps = 64/452 (14%) Query: 25 WRESVRDEFGLPTGQTRARQE-SYPTREAAEARRDELNAARHTTGTSALAEQRKAGELPF 83 W ++V+ LP G R + SY + AR + N + + E + + Sbjct: 7 WHKTVK----LPDGSARREKSASYGRGKRWAARYRDSNGQQKSPKFRTKPEAERHLKKVE 62 Query: 84 GYFARG-WLDAQALKV-----AQGKLKQRTVDE-----YDRLLRTYIFDTLGGTAVAAIT 132 G ARG ++D A +V A+ +K +V+E +R R +++ LGG+ + AI Sbjct: 63 GELARGLYVDPSAGQVTLKEFAEDVVKNASVEESSRHDLERRFRKHVYPFLGGSQLRAIR 122 Query: 133 PAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFS 192 P+ + + +++ GD+ TV+ V+D L V + A+ I NP Sbjct: 123 PSMIQEWIKG---RSAELGDQ------TVRTVFDNLSMVFQAAVDDELIARNPCRAGSVK 173 Query: 193 ASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSG 252 T R + P + E V + +A+ A GLR EV G Sbjct: 174 PPSVT----RRKVIPWSVELVSGIRSALPARYQALVVPG---------AGCGLRQGEVLG 220 Query: 253 LEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATD 312 L V DL + +++VRR G + K K R VPLP + +A Sbjct: 221 LAVDDLSASKH---TLHVRRQVKLMAGKPVFAPPKGGKERE-VPLPGHVLSALAA----- 271 Query: 313 HPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDT--IVKPALEAVALP 370 H P A P ++ GG K ++ + A+ Y + KPAL A + Sbjct: 272 HMERFPPVAVTLPWKHFGG----KPVTVSLIFTSRERKALNATYVNAYLWKPALVAAGVL 327 Query: 371 ASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPE 430 + PA + A H LRH +A + L +G ++ +LGH TL TY +P+ Sbjct: 328 PAPPAGERIQAAHDKGFHQLRHHYASVMLDSGVSVRALADFLGHHDPGFTLRTYAHMMPK 387 Query: 431 QD----------GGALNTLPEPPAP-VRPTET 451 + A++ L P AP VRP+++ Sbjct: 388 NEERAREAIDRAWSAVDGLRSPCAPDVRPSDS 419 >tr|B5GE73|B5GE73_9ACTO Tax_Id=465543 SubName: Full=TraSA:integrase fusion protein;[Streptomyces sp. SPB74] Length = 436 Score = 72.4 bits (176), Expect = 1e-10 Identities = 93/392 (23%), Positives = 148/392 (37%), Gaps = 68/392 (17%) Query: 44 QESYPTREAAEARRDELNAARHTTGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKL 103 +E++ R A++R ++ A G + + QR G F A W ++ + Sbjct: 82 KENFERRPQADSRAAKVKA--ELDGGTFVPRQR--GRETFREVAERWRESAIHR------ 131 Query: 104 KQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKH 163 +RT +R LR +++ T G + +I + + + P T Sbjct: 132 -ERTTSNVERALRLHVYPTFGARQIGSIQSSDARRWMKERAAV---------IAPSTFAT 181 Query: 164 VWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGD 223 W+ VL+ A G I +P D V+ E PL E + L AA Sbjct: 182 PWNCFTGVLKMAYQEGLITKHPCDGVE------PPKPVYPEVQPLHPEAMKALIAA---- 231 Query: 224 IAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWIT 283 V A +GLR E+ GLE + P V ++ G Sbjct: 232 -----SSKRYRLLVHLAAASGLRGGELFGLEEKHVT----PGAVVVEQQLIGPDKGVPYL 282 Query: 284 GTLKSKKSRRTVPLPPWLAERMADYLATDHPRA------NEPTAPLWPSR-----NNGGG 332 G K+ +S RTVPLP LA + Y A PR P P+W S + GG Sbjct: 283 GEPKTSQSYRTVPLPKSLAAEVEAYKAAFPPREVWIEDRTNPRKPVWRSARLLFTSQNGG 342 Query: 333 HRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRH 392 +G V W + + + ++ + AV +P++ LHD RH Sbjct: 343 QLRRGSWARV---WGRTVNRA---NRALERSGSAVRVPSA------------ATLHDARH 384 Query: 393 TFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTY 424 +A + +S G QV + LGH+ ++TL+ Y Sbjct: 385 FYASVLISKGATPKQVQRRLGHAKPSVTLNVY 416 >tr|C0W4G9|C0W4G9_9ACTO Tax_Id=525246 SubName: Full=Phage integrase family protein;[Actinomyces urogenitalis DSM 15434] Length = 437 Score = 72.0 bits (175), Expect = 2e-10 Identities = 106/452 (23%), Positives = 168/452 (37%), Gaps = 70/452 (15%) Query: 16 KALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDELNAARHTTGTSALAEQ 75 + LK +VVW R PT + +E + T AA + + G +A A + Sbjct: 32 RRLKSGQVVWDVQFR-----PTPGSSPTREVFDTLPAA---KQFVTLIDRVGGAAARAAR 83 Query: 76 RKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAH 135 A Q L + + T+ Y ++ T + TLG IT Sbjct: 84 DMATMSGTSVPTLNTAIDQHLDELRASVTAGTIRRYQQIANTRLRPTLGDLPCDLITRPV 143 Query: 136 CEALLTALVRQASRQGDKKPLTPG--TVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSA 193 L ++G K TP T++ +L VL + + G I TN + Sbjct: 144 VTQWLAKQRETPVQRGRTKGSTPSYKTLRGAQALLSSVLEHQVRAGTIPTNVARGLKLPR 203 Query: 194 SRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGL 253 D LT Q L + V + GLR E + L Sbjct: 204 DGIVRDKVF-----LTPTQFATLLDCV---------PDAHKPLVSTLYGLGLRFGEATAL 249 Query: 254 EVGDL-VFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATD 312 DL + A +P V + K+ K G+++ G+ K+++S RTV +PP L + + Sbjct: 250 TPADLDLDAAQPVVRVT-KAWKEGKKGSYL-GSPKTRRSIRTVTVPPSLIP-----ILRE 302 Query: 313 HPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPAS 372 R +P A L+P+ + + + G F+ + +PA+ A L Sbjct: 303 QARKKKPGALLFPNA------------------YGEQITSGAFHARVWQPAVAASGLDP- 343 Query: 373 RPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQD 432 AP R+HDLRH+ A ++AG + + LGH + T+D YG PE Sbjct: 344 ------AP-----RVHDLRHSHASALIAAGIPLPVIQRRLGHESIQTTVDVYGHLAPEAY 392 Query: 433 GGALN--------TLPEPPAPVRPTETVNNVV 456 GA + LP+ + P E V V+ Sbjct: 393 AGAASAIDLSLTQALPKVESEAAPDEIVGEVL 424 >tr|C0CRV3|C0CRV3_9FIRM Tax_Id=476272 SubName: Full=Putative uncharacterized protein;[Blautia hydrogenotrophica DSM 10507] Length = 356 Score = 72.0 bits (175), Expect = 2e-10 Identities = 78/330 (23%), Positives = 131/330 (39%), Gaps = 57/330 (17%) Query: 102 KLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTV 161 +L++ + + ++ T + G V+ ITPA+ AL+ A R KP + + Sbjct: 72 RLREHSFIQKQYIINTKLLPFFGKLPVSQITPAYVRKWQNALI--AYRDKKDKPYSETYL 129 Query: 162 KHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIR 221 + + + L ++ YA+ + + NP + S + D +F T+++ R I Sbjct: 130 RTINNQLSAIMNYAVRYYDLKENPCRKAG-SIGKGHADEMQF----WTTDEFKRFLEKIS 184 Query: 222 GDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAW 281 + YTGLR E+ LE GD+ F C++NV ++ NG Sbjct: 185 DKPPARAGFL-------ILYYTGLRIGELLALEYGDIDF---DGCTINVNKSYQHINGKD 234 Query: 282 ITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYA 341 + K+ KS R + +P +L + + Y T L+ G H+ Sbjct: 235 VVTPPKTPKSVRIISIPEFLRDEIKSY-----------TERLY------GLHKH------ 271 Query: 342 VPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSA 401 D P F I++ TKD R +RLHD+RH+ A L + Sbjct: 272 ---DRIFPCTKHFFEHEIMR-------------GTKDGEVKR-IRLHDIRHSHASLLIEM 314 Query: 402 GTHFMQVSKWLGHSTFTLTLDTYGDYIPEQ 431 G + V+ LGH TL+TY P + Sbjct: 315 GFSPLAVADRLGHEKVETTLNTYSHLFPHK 344 >tr|A8L4S3|A8L4S3_FRASN Tax_Id=298653 SubName: Full=Integrase family protein;[Frankia sp.] Length = 426 Score = 71.2 bits (173), Expect = 3e-10 Identities = 104/435 (23%), Positives = 155/435 (35%), Gaps = 94/435 (21%) Query: 25 WRESVRDEFGLPTGQTRARQESYPTR-EAAEA----RRDELNAARHTTGTSALAEQRKAG 79 WR +V + G G+ + + S TR E AE RR++ + TG L + Sbjct: 23 WRATV--DLGWKDGKRQRKYLSGKTRTEVAEKLRALRREQEDGVAVVTGVKLLTLEE--- 77 Query: 80 ELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEAL 139 + WLD +A K++ T+ Y +R I LG + +TP H EA Sbjct: 78 ------WLTFWLDT----IAARKVRPSTLATYRGYVRNRIVPALGAVRLDRLTPEHLEAF 127 Query: 140 LTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGD 199 + +K+ L TV + ++ R L+ A G + N VD + Sbjct: 128 Y--------HRCEKEGLAAATVLQMHRIVSRALKVAHRRGRVARNVATLVDPPSVD---- 175 Query: 200 HARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGL--EVGD 257 R E PLT+ + A +G GLR E GL + Sbjct: 176 --RDEIRPLTASDARAVLDAAKGQRNSARWSVALAL--------GLRQGEALGLAWDAVK 225 Query: 258 LVFAP-------------------EPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLP 298 L AP +P+ RR R G + KS+ RRT+ +P Sbjct: 226 LDAAPATLTVRQALQRRRWEHGCTDPKTCGTARRCPRRTGGGLVIVRPKSRAGRRTIVIP 285 Query: 299 PWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDT 358 LA + + + + +R A +W + Sbjct: 286 ENLAASLRAHRSAQ-----------------------RAERQAADGEWVNEHEL-----V 317 Query: 359 IVKPALEAVALPASRPATKDAPATRGVR---LHDLRHTFAVLQLSAGTHFMQVSKWLGHS 415 V+P + A A +D + GVR LHD RHT A L L+ H V + +GHS Sbjct: 318 FVQPNGRPLDPRADHRAWQDLLSQAGVRAARLHDARHTMASLLLAQKVHPRVVMEIMGHS 377 Query: 416 TFTLTLDTYGDYIPE 430 +LTL TY PE Sbjct: 378 QISLTLGTYSHVAPE 392 >tr|Q5Z1Y5|Q5Z1Y5_NOCFA Tax_Id=37329 SubName: Full=Putative phage integrase;[Nocardia farcinica] Length = 403 Score = 70.9 bits (172), Expect = 3e-10 Identities = 102/420 (24%), Positives = 157/420 (37%), Gaps = 85/420 (20%) Query: 7 HETKQKRNGKALKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDELNAARHT 66 H K +GK + WR D G R + + + A++ D AA Sbjct: 27 HRVPSKLHGKGKR-----WRARYVD------GTGRENTKRFARKVDAQSWLDAQTAAV-- 73 Query: 67 TGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGT 126 S + AG + A WLD ++ T Y ++ +I G Sbjct: 74 --VSGVHAPPSAGRVTVDVIATAWLDNHP------SWEESTRSRYRSVVDAHIRPRWGNV 125 Query: 127 AVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPT 186 VA + AH E + ++ Q S GTV+ VL ++ YA+ I NP Sbjct: 126 RVADL--AH-EEIQQWVIEQVSGGA-----AGGTVRKNLGVLSQICDYAVITRRIAVNPC 177 Query: 187 DRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLR 246 V+ R + L+ +V RLA G+ V +AY GLR Sbjct: 178 STVNRPKQRLA------KRRYLSGMEVERLAEQAGGN----------WLTVMVLAYCGLR 221 Query: 247 AAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMA 306 AE++GL+V + R + + RT +G +T K + RR+VP P +LAE + Sbjct: 222 FAELAGLQVSSVSL---QRRRLQIERTITEVDGVLVTKAPKDHQ-RRSVPFPAFLAEPLE 277 Query: 307 DYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEA 366 +LA P + T+ + G R + R A ++D K Sbjct: 278 RHLAGRRPDSEVFTS------STGAILRVRNMRRA-------------WWDGAAK----- 313 Query: 367 VALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGD 426 A G+ H++RHT A L +S G + + + LGH + TLD Y D Sbjct: 314 ------------AAGLEGLTPHEMRHTAASLAVSHGASVLALQRMLGHDKPSTTLDFYAD 361 >tr|C0ZMF9|C0ZMF9_RHOE4 Tax_Id=234621 SubName: Full=Putative integrase;[Rhodococcus erythropolis] Length = 374 Score = 70.5 bits (171), Expect = 4e-10 Identities = 95/372 (25%), Positives = 138/372 (37%), Gaps = 77/372 (20%) Query: 52 AAEARRDELNAARHTTGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEY 111 AAE RR E GT + QR L FG++A W G+ K RT D Sbjct: 56 AAERRRIE-------QGTWSPPGQRAVAALTFGHYAERWFTETT-----GRHKPRTRDLN 103 Query: 112 DRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRV 171 L I T + E L +VR D +P + + +LR + Sbjct: 104 RGYLDRVILPTFANLEL--------EGLNVQMVRTWFASLDARPTRNA---NAYSLLRTI 152 Query: 172 LRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXX 231 L AL I NP RA E L++ +V L+AA+ + Sbjct: 153 LNQALDDELIQVNPC-----RIKRAAVKVRVVEPIALSAGEVRALSAAMSIE-------- 199 Query: 232 XXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKS 291 V ++GLR E++ L D+V + CSV V R R+ G ++ G KS + Sbjct: 200 RWRALVLVAGFSGLRWGELAALRRSDVVLT-DSECSVTVARAVVRRTGEFVIGRPKSHAA 258 Query: 292 RRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVP--LDWSQP 349 RTVPLP L E + D+L + YA+P P Sbjct: 259 LRTVPLPSALREALEDHL----------------------------ELYALPGRNGLVFP 290 Query: 350 LAMGTF-YDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQV 408 GT ++ +V+P L+ A + R HDLRHT A + AG Sbjct: 291 SVGGTVAHENVVRPHLKKAAAKIGH---------QSFRFHDLRHTAATMFAQAGATLADH 341 Query: 409 SKWLGHSTFTLT 420 +GH++ ++ Sbjct: 342 MTLMGHTSAAMS 353 >tr|C0UDI1|C0UDI1_9ACTO Tax_Id=526225 SubName: Full=Site-specific recombinase XerD;[Geodermatophilus obscurus DSM 43160] Length = 326 Score = 69.3 bits (168), Expect = 1e-09 Identities = 84/357 (23%), Positives = 137/357 (38%), Gaps = 68/357 (19%) Query: 77 KAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHC 136 KAG++ F +A W Q + T ++ +LR +++ LG +A + P+ Sbjct: 10 KAGKVTFQDYAEEWRAGQVHRPT-------TAAHHETMLRRHVYPHLGHRPLADVRPSEV 62 Query: 137 EALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRA 196 +A + L + L P TV V ++ + + A+ + T+P + + Sbjct: 63 QAWVRRL---------SETLAPSTVGVVHRIVAGIFKAAVRDRRVATSPCEGTKLPKRQP 113 Query: 197 TGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVG 256 R E PL++E V L AA A TG+R EV GL V Sbjct: 114 K----RVE--PLSTEAVAALIAAA---------PDRYRTLFVLAAGTGMRQGEVFGLTVD 158 Query: 257 DLVFAPEPRCSVNVRRTKDRKNGAW-ITGTLKSKKSRRTVPLPPWLAERMADYLATDHPR 315 + F R V V R G K+ S RT+PLP + + +A +LA Sbjct: 159 RINFL---RRQVTVDRQLVLVPGREPFLAPPKTAASHRTIPLPQVVVDALAAHLAA---- 211 Query: 316 ANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPA 375 +P+ +G + + +P+ F + +PA A LP++ Sbjct: 212 --------FPAGPDG---------FVFTTEAGKPIRRTAFSAQVWQPAARAAGLPSAET- 253 Query: 376 TKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIPEQD 432 H LRH +A L + G V LGH++ + TLDTY P+ + Sbjct: 254 -----------FHGLRHHYASLLIRHGESVKTVQARLGHASASETLDTYSHLWPDSE 299 >tr|B5G9R4|B5G9R4_9ACTO Tax_Id=465543 SubName: Full=Phage integrase;[Streptomyces sp. SPB74] Length = 426 Score = 68.6 bits (166), Expect = 2e-09 Identities = 108/452 (23%), Positives = 163/452 (36%), Gaps = 72/452 (15%) Query: 5 RAHETKQKRNGKALKRYEVVWRESVRDEFGLPTGQTRARQESY-PTREAAEARRDELNAA 63 R T+ +G +R + W + + L G TR R Y TR+ A + E AA Sbjct: 10 RRSRTRANGDGTVYQRKDGRWEAA---GYVLAPGNTRKRVRVYGATRKGAMTKLTEKIAA 66 Query: 64 RHTTGTSALAEQRKAGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTL 123 + A A+ + L + WLD VA L++ T Y +R ++ + Sbjct: 67 SNRGLPVAAADSTVSAYLTY------WLDG----VAVHHLRENTHTRYAASIRLHLNPGI 116 Query: 124 GGTAVAAITPAHCEALLTAL-------------VRQ---ASRQGDKKPLTPGTVKHVWDV 167 G +A +T L L VR+ A Q K L+P TV +V V Sbjct: 117 GAKKLARLTTRDVRTFLDGLRTTCQCCARDRDSVRRSCCAIGQCCGKRLSPLTVTYVHAV 176 Query: 168 LRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLAAAIRGDIAGX 227 L+ L +A+ + N V + R RF+ PLT+ + RL A GD Sbjct: 177 LKSALEHAVREDELPRNVARNVKTTTPRPR----RFQ--PLTATEAQRLLHAANGD---- 226 Query: 228 XXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLK 287 E TGLR E+ GL DL S++ + R G + T K Sbjct: 227 ----RLHALYELALRTGLRKGELLGLHWEDLDL-DGGTASIHRSLQRTRSQGLTVLNT-K 280 Query: 288 SKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWS 347 + S R + LP + +A++ R + +R W+ Sbjct: 281 TLASERRIALPTECLSSL---------KAHQ--------------ERQQEERQTAGTSWT 317 Query: 348 QPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQ 407 G + T L+ L S R +R HDLRH+ A L L G + Sbjct: 318 DN---GLVFTTPKGKPLDPTNLTRSFRRLLHGAELRTIRFHDLRHSTATLLLEQGVDLVV 374 Query: 408 VSKWLGHSTFTLTLDTYGDYIPEQDGGALNTL 439 + + LGH+ +T Y A+ TL Sbjct: 375 IKELLGHAHIGVTAGVYAHVRLRLQRQAIETL 406 >tr|O86766|O86766_STRCO Tax_Id=1902 SubName: Full=TraSA:integrase fusion protein;[Streptomyces coelicolor] Length = 768 Score = 68.2 bits (165), Expect = 2e-09 Identities = 94/357 (26%), Positives = 137/357 (38%), Gaps = 46/357 (12%) Query: 77 KAGELPFGYFARGWLDAQALKVA-QGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAH 135 +A + F +A WL+ + A Q ++QR LR + F +G + + P H Sbjct: 436 RAARVTFKGYAVKWLETHGIDPASQVVVEQR--------LRLHAFRLIGSRPLDSFRPEH 487 Query: 136 CEALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASR 195 L++AL + G G ++++ +R VL A+ G + NP S Sbjct: 488 IRGLVSALENDPAVSG-------GYARNIYGDVRAVLSAAVDDGLLPRNPCSAK--SVRP 538 Query: 196 ATGDHARFEHHPLTSEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEV 255 + R P EQV + AA+ V+ A GLR E+ GL Sbjct: 539 PAVEQRRVV--PWLPEQVQAVRAAL---------PQRYRPMVDMGAGCGLRQGEIVGLAE 587 Query: 256 GDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPR 315 + FA V V R G + K K R VPLPP +A+ + H Sbjct: 588 DAVDFASG---IVRVLRQVKLIRGKAVFAPPKCNKER-DVPLPPSVADALPA-----HMD 638 Query: 316 ANEPTAPLWPSRNNGG---GHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPAS 372 A +P P R G R A L W + + KPAL A L + Sbjct: 639 AFKPVEITLPWRKPDGPKVSARLLFTNTASGLVWRSNFNVQEW-----KPALAAAGLISE 693 Query: 373 RPATKDAPATRGVRLHDLRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIP 429 A + R +H LRH +A + L AG VS++LGH+ LTL Y +P Sbjct: 694 AGADGKYESAREHGMHALRHFYASVLLDAGESIKAVSEYLGHADPGLTLRVYAHLMP 750 >tr|A6WXA0|A6WXA0_OCHA4 Tax_Id=439375 SubName: Full=Phage integrase family protein;[Ochrobactrum anthropi] Length = 414 Score = 67.8 bits (164), Expect = 3e-09 Identities = 103/428 (24%), Positives = 163/428 (38%), Gaps = 55/428 (12%) Query: 18 LKRYEVVWRESVRDEFGLPTGQTRARQESYPTREAAEARRDELNAARHTTGTSALAEQRK 77 LK VV + R + L T + +++ A E R A SA A ++ Sbjct: 15 LKTAWVVDYKDTRGKRRLKTFARKKEADAFAATAAVEVREGVHVA------DSASATVKQ 68 Query: 78 AGELPFGYFARGWLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCE 137 AGEL + RG Q L++ T+ +Y + L +I LG T ++ + Sbjct: 69 AGEL---WIKRG---------EQNGLERGTIVQYRQHLDLHITPFLGDTLLSRLNVPTVR 116 Query: 138 ALLTALVRQASRQGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRAT 197 A L+ + + V+ V L +L A G ++ N + S R Sbjct: 117 AFEDKLIDEGR--------SVSMVRKVLVSLGSLLSDAQERGLVIRNAVR--EKSRVRQK 166 Query: 198 GDHARFEHHPLTSEQVG---RLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLE 254 G R E ++G L A I+ + + TGLRA+E+ GL Sbjct: 167 GKERRLERRQKGKLKLGVDIPLPAEIKAIVGALQGKWRPVILTAIL--TGLRASELRGLR 224 Query: 255 VGDLVFAPEPRCSVNVRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHP 314 D+ F + + V + DR N G KS+ R+VP+PP +A + ++ Sbjct: 225 WADIDF---DKREIRVHQRADRFNAI---GRPKSEAGERSVPIPPLVANTLKEW------ 272 Query: 315 RANEPTAPLWPSRNNGGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPA-LEAVALPASR 373 R + P L NG + ++ A P + ++ P +EA A+ Sbjct: 273 RLSCPRPKLKDEAGNGIREEIRPEQLAFPNGQGKVESLSNIMHRGFLPVQVEAGISVATG 332 Query: 374 PATKDAP---ATRGVRLHDLRHTFAVLQLSA------GTHFMQVSKWLGHSTFTLTLDTY 424 KD A + H LRH +A ++ G V + LGHS+ LT+DTY Sbjct: 333 EKDKDGKPIMAAKYTGFHSLRHFYASWCINRREDGGLGLPPKMVQERLGHSSIMLTMDTY 392 Query: 425 GDYIPEQD 432 G P D Sbjct: 393 GHLFPRND 400 >tr|A0QCT7|A0QCT7_MYCA1 Tax_Id=243243 SubName: Full=Integrase;[Mycobacterium avium] Length = 368 Score = 67.8 bits (164), Expect = 3e-09 Identities = 86/384 (22%), Positives = 144/384 (37%), Gaps = 73/384 (19%) Query: 46 SYPTREAA----EARRDELNAARHTTGT----SALAEQRKAGELPFGYFARGWLDAQALK 97 ++PT+ +A +A D ++ R G + A +R+A +L +A+ WLD + Sbjct: 25 TFPTKSSAGHWLQAEEDLIDLDRRRPGEWTPPAERAARRQAEKLTLRTYAKTWLDNKT-- 82 Query: 98 VAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQGDKKPLT 157 KL +RT D Y L ++ LG +A ITP H L + + + Sbjct: 83 ----KLARRTRDNYQGHLDNHVLPALGDLGLADITPEHVRTWFAGLGNEHETRNAQ---- 134 Query: 158 PGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSEQVGRLA 217 + VL V A+ I NP R+ A HAR L + Q+ LA Sbjct: 135 ------AYAVLNGVFNTAVADDLIDRNPC-RI---RGAAQVKHARRSVVLLDATQLTALA 184 Query: 218 AAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVRRTKDRK 277 + D V + GLR EV L GD+ SV + R+ + Sbjct: 185 EKMPDDAR---------LGVLLAGWCGLRKGEVFALRRGDVA---ADGSSVRIERSVTYR 232 Query: 278 NGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNNGGGHRAKG 337 G + G K+++SRR V +PP + + ++L ++ + PS + G + Sbjct: 233 EGRFEVGPTKTRESRRVVSVPPHVRPAVLEHLQRHVADGDDALVFVEPSTGSFAGEKR-- 290 Query: 338 QRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDLRHTFAVL 397 + T + A A+ P + HDLRH V+ Sbjct: 291 ------------------FRTAWESARAAIGQP-------------DMHFHDLRHAAGVM 319 Query: 398 QLSAGTHFMQVSKWLGHSTFTLTL 421 G ++ LGH++ +++ Sbjct: 320 AAQTGATVRELMDRLGHTSPNMSM 343 >tr|D1C8V1|D1C8V1_9CHLR Tax_Id=479434 SubName: Full=Integrase family protein;[Sphaerobacter thermophilus DSM 20745] Length = 376 Score = 67.8 bits (164), Expect = 3e-09 Identities = 83/340 (24%), Positives = 127/340 (37%), Gaps = 56/340 (16%) Query: 90 WLDAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASR 149 WL+ VA+ L+ RT + Y ++ ++ LG T +A ++P V++ Sbjct: 76 WLE----DVARPSLRPRTYESYRGIITRHLTPALGRTRLARLSPDQ--------VQRYIN 123 Query: 150 QGDKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLT 209 Q L+P TV + VLR+ L A+ G + N + + ARF LT Sbjct: 124 QKQAAGLSPRTVTYHRAVLRKALNDAMRWGLVSRNAAALA--APPKQDRPPARF----LT 177 Query: 210 SEQVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVN 269 E+ + G GLR E GL D+ ++ Sbjct: 178 PEEARHFLDTVAGH--------RLEALFTVALAVGLRQGEALGLRWDDVDLEAG---TLT 226 Query: 270 VRRTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPLWPSRNN 329 VR R GA + K+++SRRTV LP + ++ Sbjct: 227 VRYALQRSGGALVLVEPKTQRSRRTVALPAVALRALREHRT------------------- 267 Query: 330 GGGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHD 389 R +R A P W G + + + A++A L + +R HD Sbjct: 268 ----RQLEERIAAPY-WDD---QGFVFTSTIGTAIDARNLTREFHRLRAEAGLPWLRFHD 319 Query: 390 LRHTFAVLQLSAGTHFMQVSKWLGHSTFTLTLDTYGDYIP 429 LRH A L ++ G + V + LGHS TLTL TY P Sbjct: 320 LRHGCASLLMAQGVNPRVVMEILGHSQITLTLGTYSHVAP 359 >tr|P71956|P71956_MYCTU Tax_Id=1773 SubName: Full=PROBABLE phiRv2 PROPHAGE INTEGRASE;[Mycobacterium tuberculosis] Length = 375 Score = 67.4 bits (163), Expect = 4e-09 Identities = 98/386 (25%), Positives = 145/386 (37%), Gaps = 76/386 (19%) Query: 36 PTGQTRARQESYPTREAAEA----RRDELNAARHTTGTSALAEQRKAGELPFGYFARGWL 91 P G+ +++ + AEA RR E++ R ++ E R PFG +A GWL Sbjct: 30 PDGRVYIAPKTFNAKIDAEAWLTDRRREID--RQLWSPASGQEDRPGA--PFGEYAEGWL 85 Query: 92 DAQALKVAQGKLKQRTVDEYDRLLRTYIFDTLGGTAVAAITPAHCEALLTALVRQASRQG 151 Q +K RT Y +LL +I T T + ITPA Sbjct: 86 K-------QRGIKDRTRAHYRKLLDNHILATFADTDLRDITPAAVRRWYATTAVG----- 133 Query: 152 DKKPLTPGTVKHVWDVLRRVLRYALHHGAIVTNPTDRVDFSASRATGDHARFEHHPLTSE 211 TP H + +LR +++ AL I +NP R+ AS A H + P T + Sbjct: 134 -----TPTMRAHSYSLLRAIMQTALADDLIDSNPC-RIS-GASTARRVH---KIRPATLD 183 Query: 212 QVGRLAAAIRGDIAGXXXXXXXXXXVEFMAYTGLRAAEVSGLEVGDLVFAPEPRCSVNVR 271 ++ + A+ V A+ +R E++ L D+ E VR Sbjct: 184 ELETITKAMPDPYQAF---------VLMAAWLAMRYGELTELRRKDIDLHGEV---ARVR 231 Query: 272 RTKDRKNGAWITGTLKSKKSRRTVPLPPWLAERMADYLATDHPRANEPTAPL-WPSRNNG 330 R R + T KS R + +PP L + D+L H N L +PS N+ Sbjct: 232 RAVVRVGEGFKVTTPKSDAGVRDISIPPHLIPAIEDHL---HKHVNPGRESLLFPSVNDP 288 Query: 331 GGHRAKGQRYAVPLDWSQPLAMGTFYDTIVKPALEAVALPASRPATKDAPATRGVRLHDL 390 H A Y + FY + A +R+HDL Sbjct: 289 NRHLAPSALYRM------------FYKA------------------RKAAGRPDLRVHDL 318 Query: 391 RHTFAVLQLSAGTHFMQVSKWLGHST 416 RH+ AVL S G ++ + LGHST Sbjct: 319 RHSGAVLAASTGATLAELMQRLGHST 344 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.132 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 3,507,853,740 Number of extensions: 145150069 Number of successful extensions: 379697 Number of sequences better than 10.0: 1916 Number of HSP's gapped: 381393 Number of HSP's successfully gapped: 2082 Length of query: 464 Length of database: 3,846,993,858 Length adjustment: 141 Effective length of query: 323 Effective length of database: 2,257,190,235 Effective search space: 729072445905 Effective search space used: 729072445905 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 82 (36.2 bits)