BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4455 (254 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HDH8|B2HDH8_MYCMM Tax_Id=216594 (trcR)SubName: Full=Two-com... 459 e-127 tr|A0PW48|A0PW48_MYCUA Tax_Id=362242 (trcR)SubName: Full=Two com... 459 e-127 tr|Q7U0T9|Q7U0T9_MYCBO Tax_Id=1765 (trcR)SubName: Full=TWO COMPO... 424 e-117 tr|Q50806|Q50806_MYCTU Tax_Id=1773 (trcR)SubName: Full=TWO COMPO... 424 e-117 tr|C6DVR8|C6DVR8_MYCTK Tax_Id=478434 SubName: Full=Two component... 424 e-117 tr|C1AM25|C1AM25_MYCBT Tax_Id=561275 (trcR)SubName: Full=Two com... 424 e-117 tr|A5U177|A5U177_MYCTA Tax_Id=419947 (trcR)SubName: Full=DNA-bin... 424 e-117 tr|A1KHH2|A1KHH2_MYCBP Tax_Id=410289 (trcR)SubName: Full=Two com... 424 e-117 tr|Q8VK91|Q8VK91_MYCTU Tax_Id=1773 (trcR)SubName: Full=DNA-bindi... 424 e-117 tr|A5WL55|A5WL55_MYCTF Tax_Id=336982 SubName: Full=Two component... 424 e-117 tr|A4KFX2|A4KFX2_MYCTU Tax_Id=395095 SubName: Full=Two component... 424 e-117 tr|A2VGW3|A2VGW3_MYCTU Tax_Id=348776 SubName: Full=Two component... 424 e-117 tr|Q741T5|Q741T5_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 410 e-113 tr|A0QBY6|A0QBY6_MYCA1 Tax_Id=243243 SubName: Full=Two component... 410 e-113 tr|A1T7G0|A1T7G0_MYCVP Tax_Id=350058 SubName: Full=Two component... 352 2e-95 tr|A0QWE7|A0QWE7_MYCS2 Tax_Id=246196 SubName: Full=DNA-binding r... 335 3e-90 tr|B0RD74|B0RD74_CLAMS Tax_Id=31964 SubName: Full=Putative two c... 277 9e-73 tr|A5CUR3|A5CUR3_CLAM3 Tax_Id=443906 SubName: Full=Putative two-... 276 1e-72 tr|A1SN10|A1SN10_NOCSJ Tax_Id=196162 SubName: Full=Response regu... 276 2e-72 tr|D1BDU4|D1BDU4_9MICO Tax_Id=446469 SubName: Full=Response regu... 271 5e-71 tr|A3TIR6|A3TIR6_9MICO Tax_Id=313589 SubName: Full=Putative two ... 271 7e-71 tr|A0R253|A0R253_MYCS2 Tax_Id=246196 SubName: Full=DNA-binding r... 270 1e-70 tr|A1TDF5|A1TDF5_MYCVP Tax_Id=350058 SubName: Full=Two component... 269 3e-70 tr|Q6AH14|Q6AH14_LEIXX Tax_Id=59736 SubName: Full=Two-component ... 267 7e-70 tr|C0W591|C0W591_9ACTO Tax_Id=525246 SubName: Full=Response regu... 267 1e-69 tr|A4AJ78|A4AJ78_9ACTN Tax_Id=312284 SubName: Full=Two-component... 266 1e-69 tr|A8M1H5|A8M1H5_SALAI Tax_Id=391037 SubName: Full=Two component... 266 2e-69 tr|B2HLI9|B2HLI9_MYCMM Tax_Id=216594 (tcrX)SubName: Full=Two-com... 265 4e-69 tr|A6WCG1|A6WCG1_KINRD Tax_Id=266940 SubName: Full=Two component... 265 4e-69 tr|A0PVL9|A0PVL9_MYCUA Tax_Id=362242 (tcrX)SubName: Full=Two com... 265 5e-69 tr|Q7WSY5|Q7WSY5_PROFR Tax_Id=1752 SubName: Full=Putative two-co... 265 5e-69 tr|C8X7W2|C8X7W2_NAKMY Tax_Id=479431 SubName: Full=Two component... 264 6e-69 tr|Q1B503|Q1B503_MYCSS Tax_Id=164756 SubName: Full=Two component... 263 1e-68 tr|A3Q3I9|A3Q3I9_MYCSJ Tax_Id=164757 SubName: Full=Two component... 263 1e-68 tr|A1UK34|A1UK34_MYCSK Tax_Id=189918 SubName: Full=Two component... 263 1e-68 tr|A9WLM7|A9WLM7_RENSM Tax_Id=288705 SubName: Full=Two-component... 263 1e-68 tr|A4X6T1|A4X6T1_SALTO Tax_Id=369723 SubName: Full=Response regu... 263 1e-68 tr|Q745Q7|Q745Q7_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 263 2e-68 tr|A0Q9K5|A0Q9K5_MYCA1 Tax_Id=243243 SubName: Full=DNA-binding r... 263 2e-68 tr|Q0RSU6|Q0RSU6_FRAAA Tax_Id=326424 SubName: Full=Putative two-... 262 2e-68 tr|B1MBP1|B1MBP1_MYCA9 Tax_Id=561007 SubName: Full=Putative two ... 262 2e-68 tr|Q6A657|Q6A657_PROAC Tax_Id=1747 SubName: Full=Putative two-co... 261 5e-68 tr|B5GWL4|B5GWL4_STRCL Tax_Id=443255 SubName: Full=Two-component... 261 5e-68 tr|A4T8P7|A4T8P7_MYCGI Tax_Id=350054 SubName: Full=Two component... 261 7e-68 tr|Q9ADN7|Q9ADN7_STRCO Tax_Id=1902 SubName: Full=Putative two co... 260 1e-67 tr|Q7TVQ9|Q7TVQ9_MYCBO Tax_Id=1765 SubName: Full=PUTATIVE TWO CO... 259 2e-67 tr|O69730|O69730_MYCTU Tax_Id=1773 SubName: Full=PROBABLE TWO CO... 259 2e-67 tr|C6DNK6|C6DNK6_MYCTK Tax_Id=478434 SubName: Full=Two component... 259 2e-67 tr|C1AIL7|C1AIL7_MYCBT Tax_Id=561275 SubName: Full=Putative two ... 259 2e-67 tr|A2VME4|A2VME4_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 259 2e-67 >tr|B2HDH8|B2HDH8_MYCMM Tax_Id=216594 (trcR)SubName: Full=Two-component transcriptional regulator TrcR;[Mycobacterium marinum] Length = 254 Score = 459 bits (1180), Expect = e-127 Identities = 235/254 (92%), Positives = 235/254 (92%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN Sbjct: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT Sbjct: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 AGADDYMTKPFS PPADESLKVGDLKLDAASREVTRGGTPIS Sbjct: 121 AGADDYMTKPFSLEELVARLRGLLRRSSHLAPPADESLKVGDLKLDAASREVTRGGTPIS 180 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI Sbjct: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRPAE Sbjct: 241 HTVRGIGYMLRPAE 254 >tr|A0PW48|A0PW48_MYCUA Tax_Id=362242 (trcR)SubName: Full=Two component transcriptional regulator TrcR;[Mycobacterium ulcerans] Length = 257 Score = 459 bits (1180), Expect = e-127 Identities = 235/254 (92%), Positives = 235/254 (92%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN Sbjct: 4 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 63 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT Sbjct: 64 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 123 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 AGADDYMTKPFS PPADESLKVGDLKLDAASREVTRGGTPIS Sbjct: 124 AGADDYMTKPFSLEELVARLRGLLRRSSHLAPPADESLKVGDLKLDAASREVTRGGTPIS 183 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI Sbjct: 184 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 243 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRPAE Sbjct: 244 HTVRGIGYMLRPAE 257 >tr|Q7U0T9|Q7U0T9_MYCBO Tax_Id=1765 (trcR)SubName: Full=TWO COMPONENT TRANSCRIPTIONAL REGULATOR TRCR;[Mycobacterium bovis] Length = 257 Score = 424 bits (1090), Expect = e-117 Identities = 213/254 (83%), Positives = 227/254 (89%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G TR+QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVE+AH+ Sbjct: 4 MSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEVAHD 63 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G+EAI+KFDK+ PDVLVLDIMLPDVDGL+IL+RVR+SD YTPTLFLTARDSVMDRVTGLT Sbjct: 64 GQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVYTPTLFLTARDSVMDRVTGLT 123 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 +GADDYMTKPFS PADE+L+VGDL LD ASREVTR GTPIS Sbjct: 124 SGADDYMTKPFSLEELVARLRGLLRRSSHLERPADEALRVGDLTLDGASREVTRDGTPIS 183 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+DREPMI Sbjct: 184 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREPMI 243 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRP E Sbjct: 244 HTVRGIGYMLRPPE 257 >tr|Q50806|Q50806_MYCTU Tax_Id=1773 (trcR)SubName: Full=TWO COMPONENT TRANSCRIPTIONAL REGULATOR TRCR; SubName: Full=Response regulator homolog TrcR;[Mycobacterium tuberculosis] Length = 257 Score = 424 bits (1090), Expect = e-117 Identities = 213/254 (83%), Positives = 227/254 (89%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G TR+QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVE+AH+ Sbjct: 4 MSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEVAHD 63 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G+EAI+KFDK+ PDVLVLDIMLPDVDGL+IL+RVR+SD YTPTLFLTARDSVMDRVTGLT Sbjct: 64 GQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVYTPTLFLTARDSVMDRVTGLT 123 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 +GADDYMTKPFS PADE+L+VGDL LD ASREVTR GTPIS Sbjct: 124 SGADDYMTKPFSLEELVARLRGLLRRSSHLERPADEALRVGDLTLDGASREVTRDGTPIS 183 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+DREPMI Sbjct: 184 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREPMI 243 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRP E Sbjct: 244 HTVRGIGYMLRPPE 257 >tr|C6DVR8|C6DVR8_MYCTK Tax_Id=478434 SubName: Full=Two component system transcriptional regulator trcR;[Mycobacterium tuberculosis] Length = 257 Score = 424 bits (1090), Expect = e-117 Identities = 213/254 (83%), Positives = 227/254 (89%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G TR+QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVE+AH+ Sbjct: 4 MSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEVAHD 63 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G+EAI+KFDK+ PDVLVLDIMLPDVDGL+IL+RVR+SD YTPTLFLTARDSVMDRVTGLT Sbjct: 64 GQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVYTPTLFLTARDSVMDRVTGLT 123 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 +GADDYMTKPFS PADE+L+VGDL LD ASREVTR GTPIS Sbjct: 124 SGADDYMTKPFSLEELVARLRGLLRRSSHLERPADEALRVGDLTLDGASREVTRDGTPIS 183 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+DREPMI Sbjct: 184 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREPMI 243 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRP E Sbjct: 244 HTVRGIGYMLRPPE 257 >tr|C1AM25|C1AM25_MYCBT Tax_Id=561275 (trcR)SubName: Full=Two component transcriptional regulator;[Mycobacterium bovis] Length = 257 Score = 424 bits (1090), Expect = e-117 Identities = 213/254 (83%), Positives = 227/254 (89%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G TR+QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVE+AH+ Sbjct: 4 MSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEVAHD 63 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G+EAI+KFDK+ PDVLVLDIMLPDVDGL+IL+RVR+SD YTPTLFLTARDSVMDRVTGLT Sbjct: 64 GQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVYTPTLFLTARDSVMDRVTGLT 123 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 +GADDYMTKPFS PADE+L+VGDL LD ASREVTR GTPIS Sbjct: 124 SGADDYMTKPFSLEELVARLRGLLRRSSHLERPADEALRVGDLTLDGASREVTRDGTPIS 183 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+DREPMI Sbjct: 184 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREPMI 243 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRP E Sbjct: 244 HTVRGIGYMLRPPE 257 >tr|A5U177|A5U177_MYCTA Tax_Id=419947 (trcR)SubName: Full=DNA-binding response regulator TrcR;[Mycobacterium tuberculosis] Length = 257 Score = 424 bits (1090), Expect = e-117 Identities = 213/254 (83%), Positives = 227/254 (89%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G TR+QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVE+AH+ Sbjct: 4 MSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEVAHD 63 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G+EAI+KFDK+ PDVLVLDIMLPDVDGL+IL+RVR+SD YTPTLFLTARDSVMDRVTGLT Sbjct: 64 GQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVYTPTLFLTARDSVMDRVTGLT 123 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 +GADDYMTKPFS PADE+L+VGDL LD ASREVTR GTPIS Sbjct: 124 SGADDYMTKPFSLEELVARLRGLLRRSSHLERPADEALRVGDLTLDGASREVTRDGTPIS 183 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+DREPMI Sbjct: 184 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREPMI 243 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRP E Sbjct: 244 HTVRGIGYMLRPPE 257 >tr|A1KHH2|A1KHH2_MYCBP Tax_Id=410289 (trcR)SubName: Full=Two component transcriptional regulator trcR;[Mycobacterium bovis] Length = 257 Score = 424 bits (1090), Expect = e-117 Identities = 213/254 (83%), Positives = 227/254 (89%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G TR+QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVE+AH+ Sbjct: 4 MSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEVAHD 63 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G+EAI+KFDK+ PDVLVLDIMLPDVDGL+IL+RVR+SD YTPTLFLTARDSVMDRVTGLT Sbjct: 64 GQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVYTPTLFLTARDSVMDRVTGLT 123 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 +GADDYMTKPFS PADE+L+VGDL LD ASREVTR GTPIS Sbjct: 124 SGADDYMTKPFSLEELVARLRGLLRRSSHLERPADEALRVGDLTLDGASREVTRDGTPIS 183 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+DREPMI Sbjct: 184 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREPMI 243 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRP E Sbjct: 244 HTVRGIGYMLRPPE 257 >tr|Q8VK91|Q8VK91_MYCTU Tax_Id=1773 (trcR)SubName: Full=DNA-binding response regulator TrcR;[Mycobacterium tuberculosis] Length = 276 Score = 424 bits (1090), Expect = e-117 Identities = 213/254 (83%), Positives = 227/254 (89%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G TR+QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVE+AH+ Sbjct: 23 MSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEVAHD 82 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G+EAI+KFDK+ PDVLVLDIMLPDVDGL+IL+RVR+SD YTPTLFLTARDSVMDRVTGLT Sbjct: 83 GQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVYTPTLFLTARDSVMDRVTGLT 142 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 +GADDYMTKPFS PADE+L+VGDL LD ASREVTR GTPIS Sbjct: 143 SGADDYMTKPFSLEELVARLRGLLRRSSHLERPADEALRVGDLTLDGASREVTRDGTPIS 202 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+DREPMI Sbjct: 203 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREPMI 262 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRP E Sbjct: 263 HTVRGIGYMLRPPE 276 >tr|A5WL55|A5WL55_MYCTF Tax_Id=336982 SubName: Full=Two component system transcriptional regulator trcR;[Mycobacterium tuberculosis] Length = 257 Score = 424 bits (1090), Expect = e-117 Identities = 213/254 (83%), Positives = 227/254 (89%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G TR+QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVE+AH+ Sbjct: 4 MSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEVAHD 63 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G+EAI+KFDK+ PDVLVLDIMLPDVDGL+IL+RVR+SD YTPTLFLTARDSVMDRVTGLT Sbjct: 64 GQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVYTPTLFLTARDSVMDRVTGLT 123 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 +GADDYMTKPFS PADE+L+VGDL LD ASREVTR GTPIS Sbjct: 124 SGADDYMTKPFSLEELVARLRGLLRRSSHLERPADEALRVGDLTLDGASREVTRDGTPIS 183 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+DREPMI Sbjct: 184 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREPMI 243 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRP E Sbjct: 244 HTVRGIGYMLRPPE 257 >tr|A4KFX2|A4KFX2_MYCTU Tax_Id=395095 SubName: Full=Two component transcriptional regulator trcR;[Mycobacterium tuberculosis str. Haarlem] Length = 257 Score = 424 bits (1090), Expect = e-117 Identities = 213/254 (83%), Positives = 227/254 (89%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G TR+QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVE+AH+ Sbjct: 4 MSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEVAHD 63 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G+EAI+KFDK+ PDVLVLDIMLPDVDGL+IL+RVR+SD YTPTLFLTARDSVMDRVTGLT Sbjct: 64 GQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVYTPTLFLTARDSVMDRVTGLT 123 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 +GADDYMTKPFS PADE+L+VGDL LD ASREVTR GTPIS Sbjct: 124 SGADDYMTKPFSLEELVARLRGLLRRSSHLERPADEALRVGDLTLDGASREVTRDGTPIS 183 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+DREPMI Sbjct: 184 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREPMI 243 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRP E Sbjct: 244 HTVRGIGYMLRPPE 257 >tr|A2VGW3|A2VGW3_MYCTU Tax_Id=348776 SubName: Full=Two component transcriptional regulator trcR;[Mycobacterium tuberculosis C] Length = 276 Score = 424 bits (1090), Expect = e-117 Identities = 213/254 (83%), Positives = 227/254 (89%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G TR+QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVE+AH+ Sbjct: 23 MSGYTRSQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEVAHD 82 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G+EAI+KFDK+ PDVLVLDIMLPDVDGL+IL+RVR+SD YTPTLFLTARDSVMDRVTGLT Sbjct: 83 GQEAIAKFDKVGPDVLVLDIMLPDVDGLEILRRVRESDVYTPTLFLTARDSVMDRVTGLT 142 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 +GADDYMTKPFS PADE+L+VGDL LD ASREVTR GTPIS Sbjct: 143 SGADDYMTKPFSLEELVARLRGLLRRSSHLERPADEALRVGDLTLDGASREVTRDGTPIS 202 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+DREPMI Sbjct: 203 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSDREPMI 262 Query: 241 HTVRGIGYMLRPAE 254 HTVRGIGYMLRP E Sbjct: 263 HTVRGIGYMLRPPE 276 >tr|Q741T5|Q741T5_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 257 Score = 410 bits (1053), Expect = e-113 Identities = 207/254 (81%), Positives = 222/254 (87%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G + QRPRQAILGQLPRI+RADGSPIRVLLVDDEPALTNLVKMALHYEGW V+IAHN Sbjct: 4 MSGQSAAQRPRQAILGQLPRIYRADGSPIRVLLVDDEPALTNLVKMALHYEGWVVDIAHN 63 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 GREA++KFD+ +PDVLVLDIMLPDVDGL+IL+RVR SDAYTPTLFLTARDSVMDRVTGLT Sbjct: 64 GREAMAKFDRAAPDVLVLDIMLPDVDGLRILERVRQSDAYTPTLFLTARDSVMDRVTGLT 123 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 AGADDYMTKPFS P E+LKVGDL +D ASREVTRG TP+S Sbjct: 124 AGADDYMTKPFSLEELVARLRGLLRRASQQPAPTAETLKVGDLVVDTASREVTRGDTPVS 183 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+ REPMI Sbjct: 184 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSGREPMI 243 Query: 241 HTVRGIGYMLRPAE 254 HTVRG+GYMLRPAE Sbjct: 244 HTVRGVGYMLRPAE 257 >tr|A0QBY6|A0QBY6_MYCA1 Tax_Id=243243 SubName: Full=Two component transcriptional regulator trcr;[Mycobacterium avium] Length = 254 Score = 410 bits (1053), Expect = e-113 Identities = 207/254 (81%), Positives = 222/254 (87%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 M+G + QRPRQAILGQLPRI+RADGSPIRVLLVDDEPALTNLVKMALHYEGW V+IAHN Sbjct: 1 MSGQSAAQRPRQAILGQLPRIYRADGSPIRVLLVDDEPALTNLVKMALHYEGWVVDIAHN 60 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 GREA++KFD+ +PDVLVLDIMLPDVDGL+IL+RVR SDAYTPTLFLTARDSVMDRVTGLT Sbjct: 61 GREAMAKFDRAAPDVLVLDIMLPDVDGLRILERVRQSDAYTPTLFLTARDSVMDRVTGLT 120 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 AGADDYMTKPFS P E+LKVGDL +D ASREVTRG TP+S Sbjct: 121 AGADDYMTKPFSLEELVARLRGLLRRASQQPAPTAETLKVGDLVVDTASREVTRGDTPVS 180 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKID+ REPMI Sbjct: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDSGREPMI 240 Query: 241 HTVRGIGYMLRPAE 254 HTVRG+GYMLRPAE Sbjct: 241 HTVRGVGYMLRPAE 254 >tr|A1T7G0|A1T7G0_MYCVP Tax_Id=350058 SubName: Full=Two component transcriptional regulator, winged helix family; Flags: Precursor;[Mycobacterium vanbaalenii] Length = 255 Score = 352 bits (904), Expect = 2e-95 Identities = 176/246 (71%), Positives = 202/246 (82%) Query: 8 QRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISK 67 Q PR+AILG+LPR++RADGSPIRVLLVDDE ALTNLVKMAL YEGW++++AH+ EA+ K Sbjct: 9 QGPRRAILGRLPRMYRADGSPIRVLLVDDERALTNLVKMALQYEGWEIDVAHDAAEAVDK 68 Query: 68 FDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYM 127 + +PD+LVLDIMLPD+DGL +L R+R+S AYTPTLFLTARDSV DRVTGLTAG DDYM Sbjct: 69 YRANTPDLLVLDIMLPDMDGLGVLARLRESGAYTPTLFLTARDSVADRVTGLTAGGDDYM 128 Query: 128 TKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFE 187 TKPFS P DESL VGDL LDAASREVTR G P+SL+STEFE Sbjct: 129 TKPFSLEELVARLRGLLRRSAYLAPADDESLSVGDLTLDAASREVTRAGEPVSLTSTEFE 188 Query: 188 LLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIG 247 LLR LMRN R+ALSRT+IL +VW+YDF GRTSIVDLY+SYLRKKIDA R+PMIHTVRG+G Sbjct: 189 LLRLLMRNQRKALSRTDILRKVWDYDFGGRTSIVDLYVSYLRKKIDAGRDPMIHTVRGVG 248 Query: 248 YMLRPA 253 YMLRPA Sbjct: 249 YMLRPA 254 >tr|A0QWE7|A0QWE7_MYCS2 Tax_Id=246196 SubName: Full=DNA-binding response regulator, PhoP family protein;[Mycobacterium smegmatis] Length = 255 Score = 335 bits (859), Expect = 3e-90 Identities = 166/249 (66%), Positives = 196/249 (78%) Query: 6 RTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAI 65 + RPR+AILGQLPR++R DGSPIRVLLVDDE ALTNLV+MAL YEGW +++AH+ +A+ Sbjct: 7 KNPRPRRAILGQLPRMYRPDGSPIRVLLVDDERALTNLVQMALQYEGWVIDVAHDAAQAV 66 Query: 66 SKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADD 125 K+ PD+LVLDIMLPD DGL +L+++R YTPTLFLTARDSV DRV GLTAG DD Sbjct: 67 EKYRANLPDLLVLDIMLPDTDGLGVLEQIRSFGTYTPTLFLTARDSVADRVEGLTAGGDD 126 Query: 126 YMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTE 185 YMTKPFS P ADE+L+VGDL LDA+S VTRG TPI+L+STE Sbjct: 127 YMTKPFSLEELVARLRGLLRRTAYLTPAADETLRVGDLTLDASSHTVTRGDTPIALTSTE 186 Query: 186 FELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRG 245 F+LLR LMR+PR+ALSR +IL +VW YDF GRTSIVDLY+SYLRKKID REPMIHTVRG Sbjct: 187 FQLLRVLMRHPRKALSRDDILRQVWEYDFGGRTSIVDLYVSYLRKKIDTGREPMIHTVRG 246 Query: 246 IGYMLRPAE 254 +GYMLRPA+ Sbjct: 247 VGYMLRPAD 255 >tr|B0RD74|B0RD74_CLAMS Tax_Id=31964 SubName: Full=Putative two component response regulator;[Clavibacter michiganensis subsp. sepedonicus] Length = 269 Score = 277 bits (708), Expect = 9e-73 Identities = 141/252 (55%), Positives = 176/252 (69%), Gaps = 1/252 (0%) Query: 4 STRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGRE 63 +T T Q PR+ RADGSPIRVL+VDDE +LT+L++MAL YEGW + A NG + Sbjct: 18 TTATPSGFQPAAAPQPRLTRADGSPIRVLVVDDEASLTDLLQMALRYEGWQIRTAENGHQ 77 Query: 64 AISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGA 123 A++ + PD +VLDIMLPD+DGLQ+L R+R P LFLTA+DS+ DR+ GLTAG Sbjct: 78 ALAAAREFKPDAVVLDIMLPDLDGLQVLSRLRADAEDIPVLFLTAKDSLDDRLAGLTAGG 137 Query: 124 DDYMTKPFS-XXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLS 182 DDY+TKPFS D ++VGDL LD S EV R G PI L+ Sbjct: 138 DDYVTKPFSLEEVVARLRGLIRRSTLVVSDTVDPVIRVGDLTLDEDSHEVARAGDPIELT 197 Query: 183 STEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHT 242 +TEFELLR+LMRNPRR LS+ +ILDRVW+YDF G++S+V++YISYLR+KIDA R PMIHT Sbjct: 198 ATEFELLRYLMRNPRRVLSKLQILDRVWSYDFGGKSSVVEIYISYLRRKIDAGRNPMIHT 257 Query: 243 VRGIGYMLRPAE 254 VRG GYML+ AE Sbjct: 258 VRGSGYMLKAAE 269 >tr|A5CUR3|A5CUR3_CLAM3 Tax_Id=443906 SubName: Full=Putative two-component system, response regulator;[Clavibacter michiganensis subsp. michiganensis] Length = 257 Score = 276 bits (707), Expect = 1e-72 Identities = 138/237 (58%), Positives = 173/237 (72%), Gaps = 1/237 (0%) Query: 19 PRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVL 78 PR+ RADGSPIRVL+VDDE +LT+L++MAL YEGW + A NG +A++ + PD +VL Sbjct: 21 PRLTRADGSPIRVLVVDDEASLTDLLQMALRYEGWQIRTAENGHQALAAAREFKPDAVVL 80 Query: 79 DIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXX 138 DIMLPD+DGLQ+L R+R P LFLTA+DS+ DR+ GLTAG DDY+TKPFS Sbjct: 81 DIMLPDLDGLQVLSRLRADAEDIPVLFLTAKDSLDDRLAGLTAGGDDYVTKPFSLEEVVA 140 Query: 139 XXXXXXXXXXXXXPPA-DESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPR 197 + D ++VGDL LD S EV R G PI L++TEFELLR+LMRNPR Sbjct: 141 RLRGLIRRSTLVVSDSVDPVIRVGDLTLDEDSHEVARAGDPIELTATEFELLRYLMRNPR 200 Query: 198 RALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPAE 254 R LS+ +ILDRVW+YDF G++S+V++YISYLR+KIDA R PMIHTVRG GYML+ AE Sbjct: 201 RVLSKLQILDRVWSYDFGGKSSVVEIYISYLRRKIDAGRNPMIHTVRGSGYMLKAAE 257 >tr|A1SN10|A1SN10_NOCSJ Tax_Id=196162 SubName: Full=Response regulator receiver; Flags: Precursor;[Nocardioides sp.] Length = 236 Score = 276 bits (706), Expect = 2e-72 Identities = 134/231 (58%), Positives = 167/231 (72%) Query: 23 RADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIML 82 R DG+P+RVL+VDDE + L+ MAL YEGW V AH G +A++ + PD +VLDIML Sbjct: 5 RPDGTPLRVLVVDDEANIAELISMALRYEGWQVRAAHTGSKAVAAAKEFRPDAVVLDIML 64 Query: 83 PDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXX 142 PD DGL++L+R+R +D P +FLTARD+V DRV GLTAG DDY+TKPFS Sbjct: 65 PDFDGLEVLRRIRSTDPSVPVVFLTARDAVEDRVAGLTAGGDDYVTKPFSLEELVARLRG 124 Query: 143 XXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALSR 202 A +L VGDL+LD SREV R G ++L++TEFELLRFLMRNPRR LS+ Sbjct: 125 LMRRAGAQQATASSTLVVGDLELDEDSREVFRAGREVTLTATEFELLRFLMRNPRRVLSK 184 Query: 203 TEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 +ILDRVWNYDF G+ ++V+LYISYLRKKIDA EPMIHT+RG GY+L+PA Sbjct: 185 AQILDRVWNYDFGGQANVVELYISYLRKKIDAGHEPMIHTMRGAGYVLKPA 235 >tr|D1BDU4|D1BDU4_9MICO Tax_Id=446469 SubName: Full=Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain;[Sanguibacter keddieii DSM 10542] Length = 271 Score = 271 bits (693), Expect = 5e-71 Identities = 137/236 (58%), Positives = 168/236 (71%) Query: 18 LPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLV 77 LPR+ RADGSP+RVL+VDDEP L L+ AL YEGWDV A +G+ A+ + PDV+V Sbjct: 12 LPRLTRADGSPLRVLVVDDEPNLAELLTSALRYEGWDVSTALDGQTAVRLARETVPDVIV 71 Query: 78 LDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXX 137 LDIML D+DGL++L+R+R P LFLTARDSV DRV GLTAG DDY+TKPFS Sbjct: 72 LDIMLGDIDGLEVLRRIRQQQEGVPVLFLTARDSVEDRVAGLTAGGDDYVTKPFSLEEVV 131 Query: 138 XXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPR 197 + L VGDL LD S EV R G I L++TEFELLR+LMRN R Sbjct: 132 ARLRGLLRRAGASAARDEARLVVGDLTLDEDSHEVDRAGQEIHLTATEFELLRYLMRNAR 191 Query: 198 RALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 R +S+++ILDRVW YDF G+ +IV+LYISYLR+KIDA REPMIHT+RG+GY+L+PA Sbjct: 192 RVMSKSQILDRVWQYDFGGQANIVELYISYLRRKIDAGREPMIHTLRGVGYVLKPA 247 >tr|A3TIR6|A3TIR6_9MICO Tax_Id=313589 SubName: Full=Putative two component system response regulator;[Janibacter sp. HTCC2649] Length = 244 Score = 271 bits (692), Expect = 7e-71 Identities = 131/235 (55%), Positives = 168/235 (71%) Query: 20 RIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLD 79 ++ R DGSP+RVL+VDDE LT L+ MAL YEGW+V A G +A+ + PD +VLD Sbjct: 10 KLQRPDGSPVRVLVVDDESNLTELLSMALRYEGWEVRAAATGLKAVKAAREFQPDAVVLD 69 Query: 80 IMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXX 139 +MLPD DG+++L+R+R + P LFLTA+D+V DRV GLTAG DDY+TKPFS Sbjct: 70 MMLPDFDGMEVLRRMRADNDAVPVLFLTAKDAVEDRVAGLTAGGDDYVTKPFSLEEVVAR 129 Query: 140 XXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRA 199 + + VGDL +D S EVTRGG I L++TEFELLR+LMRNP+R Sbjct: 130 LRALMRRTTVVADESSSIIAVGDLTMDEDSHEVTRGGVEIHLTATEFELLRYLMRNPKRV 189 Query: 200 LSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPAE 254 LS+ +ILDRVWNYDF G+ ++V+LYISYLRKKIDA R PMIHT+RG+GY+L+PAE Sbjct: 190 LSKAQILDRVWNYDFGGQANVVELYISYLRKKIDAGRTPMIHTMRGVGYVLKPAE 244 >tr|A0R253|A0R253_MYCS2 Tax_Id=246196 SubName: Full=DNA-binding response regulator;[Mycobacterium smegmatis] Length = 249 Score = 270 bits (690), Expect = 1e-70 Identities = 133/232 (57%), Positives = 167/232 (71%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADG+PIRVL+VDDEP L LV MAL YEGWD+ A +G AI+ + PDV+VLD+ Sbjct: 16 MRRADGNPIRVLVVDDEPVLAELVSMALRYEGWDITTAGDGASAIAAARETPPDVVVLDV 75 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL +L+++R+ P L LTA+DSV DR+ GLTAG DDY+TKPFS Sbjct: 76 MLPDMSGLDVLRKLREQIPGLPLLLLTAKDSVEDRIAGLTAGGDDYVTKPFSLEEVVLRL 135 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 + VGDL LD S EVTRGG PI+L++TEFELLRF+MRN +R L Sbjct: 136 RALLRRTGVTSEDGGAKIVVGDLVLDEDSHEVTRGGDPIALTATEFELLRFMMRNAKRVL 195 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRP 252 S+ +ILDRVW+YDF GR++IV+LY+SYLRKKID+ REPMIHT+RG GY+LRP Sbjct: 196 SKAQILDRVWSYDFGGRSNIVELYVSYLRKKIDSGREPMIHTLRGAGYVLRP 247 >tr|A1TDF5|A1TDF5_MYCVP Tax_Id=350058 SubName: Full=Two component transcriptional regulator, winged helix family;[Mycobacterium vanbaalenii] Length = 250 Score = 269 bits (687), Expect = 3e-70 Identities = 133/233 (57%), Positives = 169/233 (72%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADGSPI VL+VDDEP L LV MAL YEGW++ A +G AI+ PDV+VLD+ Sbjct: 17 MRRADGSPIHVLVVDDEPVLAELVSMALRYEGWEISTAGDGATAIAIARDNPPDVVVLDV 76 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL++L+++R+ P L LTA+DSV DR+ GLTAG DDY+TKPFS Sbjct: 77 MLPDMSGLEVLRKLREQIPGLPLLLLTAKDSVEDRIAGLTAGGDDYVTKPFSIEEVVLRL 136 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 + + VGDL LD S EVTRGG PI+L++TEFELLRF+MRN +R L Sbjct: 137 RALLRRTGVSTDTSGAKIVVGDLVLDEDSHEVTRGGDPITLTATEFELLRFMMRNAKRVL 196 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+T+ILDRVW+YDF GR++IV+LY+SYLRKKID+ REPMIHT+RG GY+L+PA Sbjct: 197 SKTQILDRVWSYDFGGRSNIVELYVSYLRKKIDSGREPMIHTLRGAGYVLKPA 249 >tr|Q6AH14|Q6AH14_LEIXX Tax_Id=59736 SubName: Full=Two-component system, regulatory protein;[Leifsonia xyli subsp. xyli] Length = 271 Score = 267 bits (683), Expect = 7e-70 Identities = 137/235 (58%), Positives = 168/235 (71%), Gaps = 1/235 (0%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADGS IRVL+VDDE LT+L+ MALHYE W+V+ A NG++A+ + PDV+VLDI Sbjct: 37 LRRADGSSIRVLVVDDEHTLTDLLAMALHYEDWEVKTASNGQQALQFSREFRPDVVVLDI 96 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+DGLQ+L R+R P LFLTA+D++ DR+ GLTAG DDY+TKPFS Sbjct: 97 MLPDIDGLQVLSRMRADGNEAPVLFLTAKDALDDRIAGLTAGGDDYVTKPFSLEELVARL 156 Query: 141 XXXXXXXXXXXPPADES-LKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRA 199 D+ L VGDL LD S EV R G PI L++TEFELLRFLMRNPRR Sbjct: 157 RGLLRRSRAAVADQDDPVLVVGDLVLDEDSYEVHRDGEPIQLTATEFELLRFLMRNPRRV 216 Query: 200 LSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPAE 254 LS+ +ILDRVW+YDF G +S+V+LYISYLRKKIDA R PMIHTVRG GYM++ + Sbjct: 217 LSKAQILDRVWSYDFGGSSSVVELYISYLRKKIDAGRTPMIHTVRGAGYMVKAVQ 271 >tr|C0W591|C0W591_9ACTO Tax_Id=525246 SubName: Full=Response regulator;[Actinomyces urogenitalis DSM 15434] Length = 252 Score = 267 bits (682), Expect = 1e-69 Identities = 132/230 (57%), Positives = 166/230 (72%) Query: 25 DGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIMLPD 84 DGSP+RVL+VDDE L +L+ AL YEGWDV A G +A+ +I PDV+VLDIMLPD Sbjct: 17 DGSPVRVLVVDDEQMLADLLASALRYEGWDVTTAATGVKAVQAAQEIEPDVVVLDIMLPD 76 Query: 85 VDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXXXX 144 DGL++++R+R P LFLTA+D+V DRV+GLTAG DDY+TKPFS Sbjct: 77 FDGLEVMRRIRGRQPSVPVLFLTAKDAVEDRVSGLTAGGDDYVTKPFSLEEVVARLRALL 136 Query: 145 XXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALSRTE 204 D L+VGDL++D S EV RG T I L++TEFELL +LMRNPRR LS+ + Sbjct: 137 RRSGAHAEQDDHVLEVGDLRMDEDSHEVWRGDTEIHLTATEFELLCYLMRNPRRVLSKPQ 196 Query: 205 ILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPAE 254 ILDRVWNYDF G+ +IV+LYISYLR+KID REPMIHT+RG+GY+L+PA+ Sbjct: 197 ILDRVWNYDFGGQDNIVELYISYLRRKIDKGREPMIHTMRGVGYVLKPAD 246 >tr|A4AJ78|A4AJ78_9ACTN Tax_Id=312284 SubName: Full=Two-component system, regulatory protein;[marine actinobacterium PHSC20C1] Length = 250 Score = 266 bits (681), Expect = 1e-69 Identities = 133/237 (56%), Positives = 171/237 (72%), Gaps = 1/237 (0%) Query: 19 PRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVL 78 PR+ RADG+ IR ++VDDE +LT+L+ MAL YEGWDV +A +G +A++ + PDV+VL Sbjct: 14 PRLSRADGTAIRAVVVDDEDSLTDLLSMALRYEGWDVRLASDGPQALATIREFRPDVVVL 73 Query: 79 DIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXX 138 DIM+P +DGL +L R+R TP LFLTA+DSV DR+ GLT G DDY+TKPFS Sbjct: 74 DIMMPGLDGLAVLTRLRADGIQTPILFLTAKDSVDDRIAGLTVGGDDYVTKPFSLEELVA 133 Query: 139 XXXXXXXXXXXXXP-PADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPR 197 ++ ++VGDL LD ++ EV RGGT + L++TEFELLR+LMRNPR Sbjct: 134 RLRALLRRSSITIAGDSNPVIEVGDLTLDESTYEVARGGTRVELTATEFELLRYLMRNPR 193 Query: 198 RALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPAE 254 R LSR +ILDRVW+YDF GR S+V++YISYLRKKID PMIHTVRG+GYML+ AE Sbjct: 194 RVLSRAQILDRVWSYDFGGRASVVEIYISYLRKKIDVLGPPMIHTVRGVGYMLKVAE 250 >tr|A8M1H5|A8M1H5_SALAI Tax_Id=391037 SubName: Full=Two component transcriptional regulator, winged helix family;[Salinispora arenicola] Length = 248 Score = 266 bits (679), Expect = 2e-69 Identities = 133/235 (56%), Positives = 165/235 (70%), Gaps = 1/235 (0%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + R DG P+RVL+VDDEP LT+L+ MAL YEGW V A NG A+S + PD +VLD+ Sbjct: 14 LRRPDGQPVRVLVVDDEPTLTDLLSMALRYEGWQVRTAGNGMAALSTARQFQPDAVVLDV 73 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+DG +L+R+R+ P LFLTARD+V DRV GLT G DDY+TKPFS Sbjct: 74 MLPDLDGFAVLRRLREVAPTVPVLFLTARDAVEDRVAGLTVGGDDYVTKPFSLEEVIARL 133 Query: 141 XXXXXXXXXXXPPADES-LKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRA 199 E+ L VGDL LD S EV+R G I+L++TEFELLR+LMRNPRR Sbjct: 134 RALLRRSGFAIAARHEAVLTVGDLSLDEDSHEVSRDGQLINLTATEFELLRYLMRNPRRV 193 Query: 200 LSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPAE 254 LS+ +ILDRVWNYDF G+ ++V+LYISYLRKKIDA R PMIHT+RG GY+L+P + Sbjct: 194 LSKAQILDRVWNYDFGGQANVVELYISYLRKKIDAGRAPMIHTLRGAGYVLKPVD 248 >tr|B2HLI9|B2HLI9_MYCMM Tax_Id=216594 (tcrX)SubName: Full=Two-component transcriptional regulatory protein TcrX;[Mycobacterium marinum] Length = 235 Score = 265 bits (677), Expect = 4e-69 Identities = 132/231 (57%), Positives = 163/231 (70%) Query: 23 RADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIML 82 RADG P+ VL+VDDEP L +V MAL YEGW++ A +G AI+ PDV+VLD+ML Sbjct: 4 RADGQPVSVLVVDDEPVLAEMVSMALRYEGWNIATASDGASAIASARAERPDVVVLDVML 63 Query: 83 PDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXX 142 PD+ GL++L R+R + P L LTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 64 PDMSGLEVLHRLRKENPALPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRA 123 Query: 143 XXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALSR 202 + L VGDL LD S EVTR G PISL+STEFELLRF+MRN +R LS+ Sbjct: 124 LLRRTGVTTVDSGAQLVVGDLVLDEDSHEVTRAGEPISLTSTEFELLRFMMRNSKRVLSK 183 Query: 203 TEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 +ILDRVW+YDF GR++IV+LYISYLRKKID REPMIHT+RG GY+L+PA Sbjct: 184 AQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPA 234 >tr|A6WCG1|A6WCG1_KINRD Tax_Id=266940 SubName: Full=Two component transcriptional regulator, winged helix family;[Kineococcus radiotolerans] Length = 273 Score = 265 bits (677), Expect = 4e-69 Identities = 135/254 (53%), Positives = 170/254 (66%), Gaps = 9/254 (3%) Query: 1 MTGSTRTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHN 60 MT ST +R + R DG+ +RVL+VDDE L+ L+ M L YEGW+V+ A N Sbjct: 22 MTASTTNRRSE---------LTRPDGTALRVLVVDDESTLSELLSMTLRYEGWEVQTAGN 72 Query: 61 GREAISKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLT 120 G +A+ PD ++LDIMLPD+DGL++L+R+R P LFLTA+D+V DRV GLT Sbjct: 73 GLDAVRAARSFRPDAVILDIMLPDIDGLEVLRRLRADATDVPVLFLTAKDAVEDRVAGLT 132 Query: 121 AGADDYMTKPFSXXXXXXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPIS 180 AG DDY+TKPFS + L VGDL LD S EVTR G I Sbjct: 133 AGGDDYVTKPFSLEEVVARLRSLLRRSGLVAAKQEPVLAVGDLVLDEDSHEVTRAGQEIR 192 Query: 181 LSSTEFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMI 240 L++TEFELLR+LMRNPRR LS+ +ILDRVWNYDF G+ +IV+LY+SYLR+KIDA R PMI Sbjct: 193 LTATEFELLRYLMRNPRRVLSKAQILDRVWNYDFGGQANIVELYVSYLRRKIDAGRNPMI 252 Query: 241 HTVRGIGYMLRPAE 254 HTVRG GY+L+PA+ Sbjct: 253 HTVRGAGYVLKPAD 266 >tr|A0PVL9|A0PVL9_MYCUA Tax_Id=362242 (tcrX)SubName: Full=Two component transcriptional regulatory protein TcrX;[Mycobacterium ulcerans] Length = 234 Score = 265 bits (676), Expect = 5e-69 Identities = 132/231 (57%), Positives = 163/231 (70%) Query: 23 RADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIML 82 RADG P+ VL+VDDEP L ++V MAL YEGW++ A +G AI+ PDV+VLD+ML Sbjct: 3 RADGQPVSVLVVDDEPVLADMVSMALRYEGWNIATASDGASAIASARAERPDVVVLDVML 62 Query: 83 PDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXX 142 PD+ GL++L R+R + P L LTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 63 PDMSGLEVLHRLRKENPRLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEIVLRLRA 122 Query: 143 XXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALSR 202 + L VGDL LD S EVTR G PISL+STEFELLRF+MRN +R LS Sbjct: 123 LLRRTGVTTVDSGAQLVVGDLVLDEDSHEVTRAGEPISLTSTEFELLRFMMRNSKRVLSN 182 Query: 203 TEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 +ILDRVW+YDF GR++IV+LYISYLRKKID REPMIHT+RG GY+L+PA Sbjct: 183 AQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPA 233 >tr|Q7WSY5|Q7WSY5_PROFR Tax_Id=1752 SubName: Full=Putative two-component system regulatory protein;[Propionibacterium freudenreichii subsp. shermanii] Length = 242 Score = 265 bits (676), Expect = 5e-69 Identities = 130/231 (56%), Positives = 164/231 (70%) Query: 23 RADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIML 82 R DG+PIRVL VDDE +LT L+ MA+ YEGW+ A G +A+ +PD +VLD+ML Sbjct: 12 RPDGTPIRVLAVDDENSLTELLSMAMRYEGWEPTTAATGSDAVRAARDTNPDAIVLDMML 71 Query: 83 PDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXX 142 PD DGL++++RVR P +FLTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 72 PDFDGLEVMRRVRAEQPDVPVIFLTAKDAVNDRIVGLTAGGDDYVTKPFSVEELMARLRS 131 Query: 143 XXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALSR 202 ++ L VGDL LD S EVTRGG I L++TEFELLR+LMRNP+R LS+ Sbjct: 132 LLRRSGATSKRSESELIVGDLVLDEDSHEVTRGGDEIHLTATEFELLRYLMRNPKRVLSK 191 Query: 203 TEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 +ILDRVWNYDF G+ ++V+LYISYLRKKIDA REPMIHT+RG GY+L+PA Sbjct: 192 AQILDRVWNYDFGGQANVVELYISYLRKKIDAGREPMIHTMRGAGYVLKPA 242 >tr|C8X7W2|C8X7W2_NAKMY Tax_Id=479431 SubName: Full=Two component transcriptional regulator, winged helix family;[Nakamurella multipartita] Length = 252 Score = 264 bits (675), Expect = 6e-69 Identities = 132/229 (57%), Positives = 164/229 (71%) Query: 25 DGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIMLPD 84 DG PIRVL+VDDE +L+ LV +AL YEGW+V A +G AI+ PD++VLD+MLPD Sbjct: 23 DGRPIRVLVVDDEQSLSELVSLALRYEGWEVRSAPDGLSAIAAARDFRPDLVVLDVMLPD 82 Query: 85 VDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXXXX 144 +DGL++L+R+R P LFLTA+D V DR+ GLTAG DDY+TKPFS Sbjct: 83 IDGLEVLRRLRADIERMPVLFLTAKDDVSDRIAGLTAGGDDYVTKPFSIEELVLRLRALL 142 Query: 145 XXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALSRTE 204 ++ VGDL LD SREV RG ISL++TEFELLRFLMRNP+R +S+ + Sbjct: 143 RRSHLALTTDSSTIVVGDLVLDEDSREVRRGDDLISLTATEFELLRFLMRNPKRVMSKAQ 202 Query: 205 ILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 ILDRVWNYDF G+ +IV+LYISYLRKKIDA REPMIHT+RG GY+L+PA Sbjct: 203 ILDRVWNYDFGGQANIVELYISYLRKKIDAGREPMIHTMRGFGYVLKPA 251 >tr|Q1B503|Q1B503_MYCSS Tax_Id=164756 SubName: Full=Two component transcriptional regulator, winged helix family;[Mycobacterium sp.] Length = 254 Score = 263 bits (673), Expect = 1e-68 Identities = 132/233 (56%), Positives = 167/233 (71%), Gaps = 1/233 (0%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADG+P+RVL+VDDEP L LV MAL YEGWD+ A +G AI+ + PDV+VLD+ Sbjct: 21 MRRADGNPVRVLVVDDEPVLAELVSMALRYEGWDIATAGDGATAIALARENPPDVVVLDV 80 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL +L ++R+ P L LTA+DSV DR+ GLTAG DDY+TKPFS Sbjct: 81 MLPDMSGLDVLAKLREQIPGLPLLLLTAKDSVEDRIAGLTAGGDDYVTKPFSLEEVVLRL 140 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 + VGDL LD S EVTRGG PI+L++TEFELLRF+MRN +R L Sbjct: 141 RALLRRTGVSES-GGAKIVVGDLVLDEDSHEVTRGGDPITLTATEFELLRFMMRNSKRVL 199 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+ +ILDRVW+YDF GR++IV+LY+SYLRKKID+ REPMIHT+RG GY+L+PA Sbjct: 200 SKAQILDRVWSYDFGGRSNIVELYVSYLRKKIDSGREPMIHTLRGAGYVLKPA 252 >tr|A3Q3I9|A3Q3I9_MYCSJ Tax_Id=164757 SubName: Full=Two component transcriptional regulator, winged helix family;[Mycobacterium sp.] Length = 254 Score = 263 bits (673), Expect = 1e-68 Identities = 132/233 (56%), Positives = 167/233 (71%), Gaps = 1/233 (0%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADG+P+RVL+VDDEP L LV MAL YEGWD+ A +G AI+ + PDV+VLD+ Sbjct: 21 MRRADGNPVRVLVVDDEPVLAELVSMALRYEGWDIATAGDGATAIALARENPPDVVVLDV 80 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL +L ++R+ P L LTA+DSV DR+ GLTAG DDY+TKPFS Sbjct: 81 MLPDMSGLDVLAKLREQIPGLPLLLLTAKDSVEDRIAGLTAGGDDYVTKPFSLEEVVLRL 140 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 + VGDL LD S EVTRGG PI+L++TEFELLRF+MRN +R L Sbjct: 141 RALLRRTGVSES-GGAKIVVGDLVLDEDSHEVTRGGDPITLTATEFELLRFMMRNSKRVL 199 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+ +ILDRVW+YDF GR++IV+LY+SYLRKKID+ REPMIHT+RG GY+L+PA Sbjct: 200 SKAQILDRVWSYDFGGRSNIVELYVSYLRKKIDSGREPMIHTLRGAGYVLKPA 252 >tr|A1UK34|A1UK34_MYCSK Tax_Id=189918 SubName: Full=Two component transcriptional regulator, winged helix family;[Mycobacterium sp.] Length = 254 Score = 263 bits (673), Expect = 1e-68 Identities = 132/233 (56%), Positives = 167/233 (71%), Gaps = 1/233 (0%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADG+P+RVL+VDDEP L LV MAL YEGWD+ A +G AI+ + PDV+VLD+ Sbjct: 21 MRRADGNPVRVLVVDDEPVLAELVSMALRYEGWDIATAGDGATAIALARENPPDVVVLDV 80 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL +L ++R+ P L LTA+DSV DR+ GLTAG DDY+TKPFS Sbjct: 81 MLPDMSGLDVLAKLREQIPGLPLLLLTAKDSVEDRIAGLTAGGDDYVTKPFSLEEVVLRL 140 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 + VGDL LD S EVTRGG PI+L++TEFELLRF+MRN +R L Sbjct: 141 RALLRRTGVSES-GGAKIVVGDLVLDEDSHEVTRGGDPITLTATEFELLRFMMRNSKRVL 199 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+ +ILDRVW+YDF GR++IV+LY+SYLRKKID+ REPMIHT+RG GY+L+PA Sbjct: 200 SKAQILDRVWSYDFGGRSNIVELYVSYLRKKIDSGREPMIHTLRGAGYVLKPA 252 >tr|A9WLM7|A9WLM7_RENSM Tax_Id=288705 SubName: Full=Two-component response regulator;[Renibacterium salmoninarum] Length = 247 Score = 263 bits (672), Expect = 1e-68 Identities = 130/237 (54%), Positives = 171/237 (72%), Gaps = 1/237 (0%) Query: 18 LPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLV 77 LPR++ DGSPIR L+VDDEP+L L+ M L GWDV++AH+G EA+ + PDVLV Sbjct: 11 LPRLNHPDGSPIRALVVDDEPSLAELMSMGLQMAGWDVQVAHDGNEALKIAREYRPDVLV 70 Query: 78 LDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXX 137 LDIMLP DG+++L ++R P LFLTA+D+V DRV GLTAG DDY+TKPFS Sbjct: 71 LDIMLPGFDGVELLGKIRLFAPNIPALFLTAKDAVQDRVAGLTAGGDDYVTKPFSMEEVL 130 Query: 138 XXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPR 197 + E ++VGDL L+ +R+VTRG ++L++TEFELLR+LM NP+ Sbjct: 131 LRLHRIVQRAGVIAEDSAE-VRVGDLVLNHDTRQVTRGADDVTLTATEFELLRYLMENPK 189 Query: 198 RALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPAE 254 R +S+T+ILDRVWNYDF G+ +IV+LYISYLRKKI+A+ PMIHTVRG GY+L+PA+ Sbjct: 190 RVISKTQILDRVWNYDFGGQVNIVELYISYLRKKIEANHPPMIHTVRGAGYILKPAD 246 >tr|A4X6T1|A4X6T1_SALTO Tax_Id=369723 SubName: Full=Response regulator receiver;[Salinispora tropica] Length = 252 Score = 263 bits (672), Expect = 1e-68 Identities = 134/250 (53%), Positives = 167/250 (66%), Gaps = 1/250 (0%) Query: 6 RTQRPRQAILGQLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAI 65 RT + + + R DG P+RVL+VDDE L +L+ MAL YEGW V A NG A+ Sbjct: 3 RTMMTNEQVAPARVDLRRPDGQPVRVLVVDDESTLADLLSMALRYEGWQVRTAGNGMAAL 62 Query: 66 SKFDKISPDVLVLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADD 125 S + PD +VLD+MLPD+DG +L+R+R+ P LFLTARD+V DRV GLT G DD Sbjct: 63 SAARQFQPDAVVLDVMLPDLDGFAVLRRLREVAPTVPVLFLTARDAVEDRVAGLTVGGDD 122 Query: 126 YMTKPFSXXXXXXXXXXXXXXXXXXXPPADES-LKVGDLKLDAASREVTRGGTPISLSST 184 Y+TKPFS E+ L VGDL LD S EV+R G I+L++T Sbjct: 123 YVTKPFSLEEVIARLRALLRRSGFAVTARQEAVLTVGDLSLDEDSHEVSRDGQLINLTAT 182 Query: 185 EFELLRFLMRNPRRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVR 244 EFELLR+LMRNPRR LS+ +ILDRVWNYDF G+ ++V+LYISYLRKKID R PMIHT+R Sbjct: 183 EFELLRYLMRNPRRVLSKAQILDRVWNYDFGGQANVVELYISYLRKKIDVGRAPMIHTLR 242 Query: 245 GIGYMLRPAE 254 G GY+L+PAE Sbjct: 243 GAGYVLKPAE 252 >tr|Q745Q7|Q745Q7_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 246 Score = 263 bits (671), Expect = 2e-68 Identities = 131/231 (56%), Positives = 163/231 (70%) Query: 23 RADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIML 82 RADG+PI VL+VDDE L +V MAL YEGW++ A +G AI+ PDV+VLD+ML Sbjct: 15 RADGNPINVLVVDDEAVLAEMVSMALRYEGWNIATASDGASAIAAARNQRPDVVVLDVML 74 Query: 83 PDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXX 142 PD+ GL +L ++R+ + P L LTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 75 PDMSGLDVLHKLREENPQLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRA 134 Query: 143 XXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALSR 202 + L VGDL LD S EVTR G PISL+STEFELLRF+MRN +R LS+ Sbjct: 135 LLRRTGVTTVDSGAQLVVGDLVLDEDSHEVTRAGEPISLTSTEFELLRFMMRNSKRVLSK 194 Query: 203 TEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 +ILDRVW+YDF GR++IV+LYISYLRKKID REPMIHT+RG GY+L+PA Sbjct: 195 AQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPA 245 >tr|A0Q9K5|A0Q9K5_MYCA1 Tax_Id=243243 SubName: Full=DNA-binding response regulator;[Mycobacterium avium] Length = 246 Score = 263 bits (671), Expect = 2e-68 Identities = 131/231 (56%), Positives = 163/231 (70%) Query: 23 RADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIML 82 RADG+PI VL+VDDE L +V MAL YEGW++ A +G AI+ PDV+VLD+ML Sbjct: 15 RADGNPINVLVVDDEAVLAEMVSMALRYEGWNIATASDGASAIAAARNQRPDVVVLDVML 74 Query: 83 PDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXX 142 PD+ GL +L ++R+ + P L LTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 75 PDMSGLDVLHKLREENPQLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRA 134 Query: 143 XXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALSR 202 + L VGDL LD S EVTR G PISL+STEFELLRF+MRN +R LS+ Sbjct: 135 LLRRTGVTTVDSGAQLVVGDLVLDEDSHEVTRAGEPISLTSTEFELLRFMMRNSKRVLSK 194 Query: 203 TEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 +ILDRVW+YDF GR++IV+LYISYLRKKID REPMIHT+RG GY+L+PA Sbjct: 195 AQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPA 245 >tr|Q0RSU6|Q0RSU6_FRAAA Tax_Id=326424 SubName: Full=Putative two-component system response regulator (Partial match);[Frankia alni] Length = 358 Score = 262 bits (670), Expect = 2e-68 Identities = 132/228 (57%), Positives = 161/228 (70%), Gaps = 1/228 (0%) Query: 28 PIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIMLPDVDG 87 P+RVL+VDDE L L+ MAL YEGW+V A +GR A+ + PD +VLDIMLPD+DG Sbjct: 18 PVRVLVVDDETTLAELLSMALRYEGWEVRSAGDGRGALRLAREFRPDAVVLDIMLPDMDG 77 Query: 88 LQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXXXXXXX 147 L++L+R+R P LFLTARD+V DRV GLTAG DDY+TKPFS Sbjct: 78 LEVLRRLRAESPDVPVLFLTARDAVEDRVAGLTAGGDDYVTKPFSLEELVARLRGLMRRA 137 Query: 148 XXXXPPADES-LKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALSRTEIL 206 + L VGDL +D SREV RGG P+ L++TEFELLRF MRNPRR LS+ +IL Sbjct: 138 ARTTEALQGARLVVGDLTMDEESREVARGGVPVHLTATEFELLRFFMRNPRRVLSKAQIL 197 Query: 207 DRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPAE 254 DRVWNYDF G+ ++V+LY+SYLRKKIDA R PMIHT+RG GY+LRPAE Sbjct: 198 DRVWNYDFGGQANVVELYVSYLRKKIDAGRPPMIHTMRGAGYVLRPAE 245 >tr|B1MBP1|B1MBP1_MYCA9 Tax_Id=561007 SubName: Full=Putative two component transcriptional regulatory protein;[Mycobacterium abscessus] Length = 249 Score = 262 bits (670), Expect = 2e-68 Identities = 128/233 (54%), Positives = 167/233 (71%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + R DGSP+RVL+VDDE +L L+ MAL YEGW++ +A +G A+ ++ PD++VLD+ Sbjct: 16 LRRPDGSPVRVLVVDDERSLAELISMALRYEGWEIHVAGDGMSAVKLARQVHPDIVVLDV 75 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPDV GL++L+++RD P L LTA+DS+ DR+ GLTAG DDY+TKPFS Sbjct: 76 MLPDVSGLEVLRQLRDLYPGLPLLLLTAKDSLEDRIAGLTAGGDDYVTKPFSLEEVVLRL 135 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 D L VGDL LD S EVTR G I+L++TEFELLRF+MRN +R L Sbjct: 136 RALLRRTGIAGDSGDARLIVGDLVLDEDSHEVTRDGELINLTATEFELLRFMMRNNKRVL 195 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+ +ILDRVW+YDF GR+++V+LYISYLRKKID REPMIHT+RG GY+L+PA Sbjct: 196 SKHQILDRVWSYDFGGRSNVVELYISYLRKKIDTGREPMIHTLRGAGYVLKPA 248 >tr|Q6A657|Q6A657_PROAC Tax_Id=1747 SubName: Full=Putative two-component system response regulator;[Propionibacterium acnes] Length = 243 Score = 261 bits (667), Expect = 5e-68 Identities = 128/238 (53%), Positives = 165/238 (69%) Query: 17 QLPRIHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVL 76 Q R RADGSPIRVL+V+DEP+LT L+ MA+ YEGWDV A++G A+ + PDV+ Sbjct: 6 QPSRFTRADGSPIRVLVVEDEPSLTGLLSMAMRYEGWDVTTANSGAHAVHEAQATRPDVI 65 Query: 77 VLDIMLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXX 136 VLD+ L D DGL++++++R + +FLTA+D+ R+ GLTAG DDY+TKPFS Sbjct: 66 VLDMRLSDFDGLEVMRQIRINQPTVRAVFLTAKDAASGRIAGLTAGGDDYVTKPFSLEEV 125 Query: 137 XXXXXXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNP 196 P D L VGDL LD SREV R G I L++TEFELLR+ MRNP Sbjct: 126 IARLRALLRRSGATEPKPDSMLTVGDLTLDENSREVRRAGEEIHLTTTEFELLRYFMRNP 185 Query: 197 RRALSRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPAE 254 +R LS+ +ILDRVWNYDF G+ ++V+LYISYLRKKID +PMIHT+RG GY+L+PAE Sbjct: 186 KRVLSKAQILDRVWNYDFRGQANVVELYISYLRKKIDRGHKPMIHTMRGAGYVLKPAE 243 >tr|B5GWL4|B5GWL4_STRCL Tax_Id=443255 SubName: Full=Two-component system response regulator;[Streptomyces clavuligerus ATCC 27064] Length = 279 Score = 261 bits (667), Expect = 5e-68 Identities = 132/233 (56%), Positives = 164/233 (70%), Gaps = 1/233 (0%) Query: 23 RADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIML 82 R DG+P+RVL+VDDE AL+ L+ MAL YEGW V A +G A+S+ + PD +VLD+ L Sbjct: 47 RPDGTPVRVLVVDDETALSELLSMALRYEGWQVRSAGDGAGAVSEAREFQPDAVVLDVAL 106 Query: 83 PDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXX 142 PD+DGL +L R+R P LFLTARD+V DR+ GLTAG DDY+TKPFS Sbjct: 107 PDMDGLTLLARLRRERPEVPVLFLTARDAVEDRIAGLTAGGDDYVTKPFSLEEVVARLRG 166 Query: 143 XXXXXXXXXPPADESL-KVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALS 201 ESL VGDL LD SREV+RGG I L++TEFELLR+LMRNPRR LS Sbjct: 167 LIRRSGAASAARGESLLAVGDLTLDEDSREVSRGGQAIHLTATEFELLRYLMRNPRRVLS 226 Query: 202 RTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPAE 254 + +ILDRVW+YDF G+ ++V+LY+SYLRKKIDA R PMIHT RG GY+++P E Sbjct: 227 KAQILDRVWSYDFGGQANVVELYVSYLRKKIDAGRAPMIHTRRGAGYLIKPGE 279 >tr|A4T8P7|A4T8P7_MYCGI Tax_Id=350054 SubName: Full=Two component transcriptional regulator, winged helix family;[Mycobacterium gilvum] Length = 249 Score = 261 bits (666), Expect = 7e-68 Identities = 132/233 (56%), Positives = 165/233 (70%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADGSPIRVL+VDDE L L+ MAL YEGWD+ A +G AI+ + PDV+VLD+ Sbjct: 16 MRRADGSPIRVLVVDDEAVLAELMSMALRYEGWDISTAGDGATAIALARQNPPDVVVLDV 75 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL++L+ +R+ P L LTA+DSV DR+ GLTAG DDY+TKPFS Sbjct: 76 MLPDMSGLEVLRTLREQIPGLPLLLLTAKDSVEDRIAGLTAGGDDYVTKPFSIEEVVLRL 135 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 L VGDL LD S EVTRGG I+L++TEFELLRF+MRN R L Sbjct: 136 RALLRRTGVATATGGAKLVVGDLVLDEDSHEVTRGGDLITLTATEFELLRFMMRNARCVL 195 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+ +ILDRVW+YDF GR++IV+LY+SYLRKKID+ REPMIHT+RG GY+L+PA Sbjct: 196 SKAQILDRVWSYDFGGRSNIVELYVSYLRKKIDSGREPMIHTLRGAGYVLKPA 248 >tr|Q9ADN7|Q9ADN7_STRCO Tax_Id=1902 SubName: Full=Putative two component system response regulator;[Streptomyces coelicolor] Length = 271 Score = 260 bits (664), Expect = 1e-67 Identities = 130/231 (56%), Positives = 161/231 (69%) Query: 23 RADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDIML 82 R DGSP+RVL+VDDE ++T L+ MAL YEGW + A +G A+ PD +VLD+ML Sbjct: 39 RPDGSPVRVLVVDDEQSITELLSMALRYEGWQIRSAGDGHGAVQTARDFRPDAVVLDMML 98 Query: 83 PDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXXXX 142 PD+DGL +L R+R P LFLTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 99 PDMDGLSVLGRLRRDLPDVPVLFLTAKDAVEDRIAGLTAGGDDYVTKPFSLEEVVARLRG 158 Query: 143 XXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRALSR 202 +D L VGDL LD S EVTR G I L++TEFELLRFLMRNPRR LS+ Sbjct: 159 LIRRSGAADRRSDSVLVVGDLTLDEDSHEVTRSGDGIHLTATEFELLRFLMRNPRRVLSK 218 Query: 203 TEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 +ILDRVW+YDF G+ ++V+LYISYLR+KIDA REPMIHT RG GY+++PA Sbjct: 219 AQILDRVWSYDFGGQANVVELYISYLRRKIDAGREPMIHTRRGAGYLIKPA 269 >tr|Q7TVQ9|Q7TVQ9_MYCBO Tax_Id=1765 SubName: Full=PUTATIVE TWO COMPONENT TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis] Length = 234 Score = 259 bits (662), Expect = 2e-67 Identities = 128/233 (54%), Positives = 162/233 (69%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADG P+ VL+VDDEP L +V MAL YEGW++ A +G AI+ + PDV+VLD+ Sbjct: 1 MRRADGQPVTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDV 60 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL +L ++R + P L LTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 61 MLPDMSGLDVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRL 120 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 + L VGDL LD S EV R G P+SL+STEFELLRF+M N +R L Sbjct: 121 RALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVL 180 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+ +ILDRVW+YDF GR++IV+LYISYLRKKID REPMIHT+RG GY+L+PA Sbjct: 181 SKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPA 233 >tr|O69730|O69730_MYCTU Tax_Id=1773 SubName: Full=PROBABLE TWO COMPONENT TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium tuberculosis] Length = 234 Score = 259 bits (662), Expect = 2e-67 Identities = 128/233 (54%), Positives = 162/233 (69%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADG P+ VL+VDDEP L +V MAL YEGW++ A +G AI+ + PDV+VLD+ Sbjct: 1 MRRADGQPVTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDV 60 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL +L ++R + P L LTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 61 MLPDMSGLDVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRL 120 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 + L VGDL LD S EV R G P+SL+STEFELLRF+M N +R L Sbjct: 121 RALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVL 180 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+ +ILDRVW+YDF GR++IV+LYISYLRKKID REPMIHT+RG GY+L+PA Sbjct: 181 SKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPA 233 >tr|C6DNK6|C6DNK6_MYCTK Tax_Id=478434 SubName: Full=Two component system transcriptional regulator;[Mycobacterium tuberculosis] Length = 286 Score = 259 bits (662), Expect = 2e-67 Identities = 128/233 (54%), Positives = 162/233 (69%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADG P+ VL+VDDEP L +V MAL YEGW++ A +G AI+ + PDV+VLD+ Sbjct: 53 MRRADGQPVTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDV 112 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL +L ++R + P L LTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 113 MLPDMSGLDVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRL 172 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 + L VGDL LD S EV R G P+SL+STEFELLRF+M N +R L Sbjct: 173 RALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVL 232 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+ +ILDRVW+YDF GR++IV+LYISYLRKKID REPMIHT+RG GY+L+PA Sbjct: 233 SKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPA 285 >tr|C1AIL7|C1AIL7_MYCBT Tax_Id=561275 SubName: Full=Putative two component transcriptional regulatory protein;[Mycobacterium bovis] Length = 234 Score = 259 bits (662), Expect = 2e-67 Identities = 128/233 (54%), Positives = 162/233 (69%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADG P+ VL+VDDEP L +V MAL YEGW++ A +G AI+ + PDV+VLD+ Sbjct: 1 MRRADGQPVTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDV 60 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL +L ++R + P L LTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 61 MLPDMSGLDVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRL 120 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 + L VGDL LD S EV R G P+SL+STEFELLRF+M N +R L Sbjct: 121 RALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVL 180 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+ +ILDRVW+YDF GR++IV+LYISYLRKKID REPMIHT+RG GY+L+PA Sbjct: 181 SKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPA 233 >tr|A2VME4|A2VME4_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 286 Score = 259 bits (662), Expect = 2e-67 Identities = 128/233 (54%), Positives = 162/233 (69%) Query: 21 IHRADGSPIRVLLVDDEPALTNLVKMALHYEGWDVEIAHNGREAISKFDKISPDVLVLDI 80 + RADG P+ VL+VDDEP L +V MAL YEGW++ A +G AI+ + PDV+VLD+ Sbjct: 53 MRRADGQPVTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDV 112 Query: 81 MLPDVDGLQILQRVRDSDAYTPTLFLTARDSVMDRVTGLTAGADDYMTKPFSXXXXXXXX 140 MLPD+ GL +L ++R + P L LTA+D+V DR+ GLTAG DDY+TKPFS Sbjct: 113 MLPDMSGLDVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRL 172 Query: 141 XXXXXXXXXXXPPADESLKVGDLKLDAASREVTRGGTPISLSSTEFELLRFLMRNPRRAL 200 + L VGDL LD S EV R G P+SL+STEFELLRF+M N +R L Sbjct: 173 RALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVL 232 Query: 201 SRTEILDRVWNYDFAGRTSIVDLYISYLRKKIDADREPMIHTVRGIGYMLRPA 253 S+ +ILDRVW+YDF GR++IV+LYISYLRKKID REPMIHT+RG GY+L+PA Sbjct: 233 SKAQILDRVWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPA 285 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.321 0.138 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,716,964,413 Number of extensions: 64561025 Number of successful extensions: 253557 Number of sequences better than 10.0: 56766 Number of HSP's gapped: 203450 Number of HSP's successfully gapped: 58977 Length of query: 254 Length of database: 3,846,993,858 Length adjustment: 134 Effective length of query: 120 Effective length of database: 2,336,116,656 Effective search space: 280333998720 Effective search space used: 280333998720 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 79 (35.0 bits)