BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4489 (448 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HDL1|B2HDL1_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 352 4e-95 tr|Q7U0V4|Q7U0V4_MYCBO Tax_Id=1765 SubName: Full=PROBABLE MEMBRA... 89 9e-16 tr|O05589|O05589_MYCTU Tax_Id=1773 SubName: Full=PROBABLE MEMBRA... 89 9e-16 tr|C6DVU9|C6DVU9_MYCTK Tax_Id=478434 SubName: Full=Membrane prot... 89 9e-16 tr|C1ALZ5|C1ALZ5_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 89 9e-16 tr|A5U147|A5U147_MYCTA Tax_Id=419947 SubName: Full=Putative memb... 89 9e-16 tr|A1KHE2|A1KHE2_MYCBP Tax_Id=410289 SubName: Full=Probable memb... 89 9e-16 tr|A5WL27|A5WL27_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 89 9e-16 tr|Q8VK97|Q8VK97_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 76 8e-12 tr|Q0A594|Q0A594_ALHEH Tax_Id=187272 SubName: Full=Diguanylate c... 36 8.8 tr|B1M4G3|B1M4G3_METRJ Tax_Id=426355 SubName: Full=Cysteine desu... 36 8.8 >tr|B2HDL1|B2HDL1_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium marinum] Length = 448 Score = 352 bits (904), Expect = 4e-95 Identities = 211/346 (60%), Positives = 211/346 (60%) Query: 1 MREGTFMRXXXXXXXXXXXXXXXXXXSPLTMSGPMHAPNQGTCTAGQQCDRLASVLIXXX 60 MREGTFMR SPLTMSGPMHAPNQGTCTAGQQCDRLASVLI Sbjct: 1 MREGTFMRVGVVGVAAAAMVGGTVAVSPLTMSGPMHAPNQGTCTAGQQCDRLASVLIPKP 60 Query: 61 XXXXXXXXXXXXITPAEAPQAMLPGLEQPPAVPAAARIXXXXXXXXXXXXXXXALTALXX 120 ITPAEAPQAMLPGLEQPPAVPAAARI ALTAL Sbjct: 61 PGEPAQPAGPAEITPAEAPQAMLPGLEQPPAVPAAARIPGGSGLPGGLDVGGSALTALPP 120 Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFPTIXXXXXXXXXXXXLGITGSVTSAVTSGAL 180 FPTI LGITGSVTSAVTSGAL Sbjct: 121 PAGVPDVGIPGVGIPGVGLPSVGVPTVGFPTIGVPSVPNVVGSVLGITGSVTSAVTSGAL 180 Query: 181 AVTYVMLAYNTLRSAGILPDLSVPISSVTNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240 AVTYVMLAYNTLRSAGILPDLSVPISSVTNM Sbjct: 181 AVTYVMLAYNTLRSAGILPDLSVPISSVTNMLLPSTATASSLLPTLAAPGLAALPGLTPA 240 Query: 241 XXVTLASMGGIPGLSLPALSGVSPATLLTEAANALPGLASVSTTDLLAVAVMGGAPQLAS 300 VTLASMGGIPGLSLPALSGVSPATLLTEAANALPGLASVSTTDLLAVAVMGGAPQLAS Sbjct: 241 GLVTLASMGGIPGLSLPALSGVSPATLLTEAANALPGLASVSTTDLLAVAVMGGAPQLAS 300 Query: 301 MLPMLQAALPGMSATDVMAMVTXXXXXXXXXXXXXXAILPGGDPTM 346 MLPMLQAALPGMSATDVMAMVT AILPGGDPTM Sbjct: 301 MLPMLQAALPGMSATDVMAMVTGGLPQLPGGLPNLQAILPGGDPTM 346 Score = 42.4 bits (98), Expect = 0.12 Identities = 17/17 (100%), Positives = 17/17 (100%) Query: 432 RLCTPTIGPIGSTCTPN 448 RLCTPTIGPIGSTCTPN Sbjct: 432 RLCTPTIGPIGSTCTPN 448 >tr|Q7U0V4|Q7U0V4_MYCBO Tax_Id=1765 SubName: Full=PROBABLE MEMBRANE PROTEIN;[Mycobacterium bovis] Length = 419 Score = 89.4 bits (220), Expect = 9e-16 Identities = 97/366 (26%), Positives = 129/366 (35%), Gaps = 37/366 (10%) Query: 1 MREGTFMRXXXXXXXXXXXXXXXXXXSPLTMSGPMHAPNQGTCTAGQQCDRLASVLIXXX 60 +REG MR +PLT+S P GTC+AGQQCDRLA+VL+ Sbjct: 7 VREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAG-GTCSAGQQCDRLAAVLMPDT 65 Query: 61 XXXXXXXXXXXXITPAEAPQA--MLPGLEQ--------------PPAVPAAARIXXXXXX 104 + P A + PGL PPAVP I Sbjct: 66 ATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIPGAAGP 125 Query: 105 XXXXXXXXXALTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPTIXXXXXXXXXXXX 164 L A P Sbjct: 126 ALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIGIPGVPD----PITGVNTAAAVVNGV 181 Query: 165 LGITGSVTSAVTSGALAVTYVMLAYNTLRSAGILPDLSVPISSVTNMXXXXXXXXXXXXX 224 LG+ G+ VT+ A+AVTY++LA N L S+GILP S+V ++ Sbjct: 182 LGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASL---LLPGAQSAAA 238 Query: 225 XXXXXXXXXXXXXXXXXXVTLASMGGIPGLSLPALSGVSPATLLTEAANA-----LPGLA 279 + +A+ G+PG+ P+L GVSP L+ AA A LPGLA Sbjct: 239 ALPAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLA 298 Query: 280 SVSTTDLLAVAVMGGAPQLASMLPMLQAALP-GMSATDVMAMVTXXXXXXXXXXXXXXAI 338 +S +L A+ V GG P LA+ A LP G++ D + Sbjct: 299 GMSPAELTAL-VAGGLPMLAA------AGLPAGLAGVDPATLAAALPALAAGGLPPGLPA 351 Query: 339 LPGGDP 344 LPG DP Sbjct: 352 LPGVDP 357 >tr|O05589|O05589_MYCTU Tax_Id=1773 SubName: Full=PROBABLE MEMBRANE PROTEIN;[Mycobacterium tuberculosis] Length = 419 Score = 89.4 bits (220), Expect = 9e-16 Identities = 97/366 (26%), Positives = 129/366 (35%), Gaps = 37/366 (10%) Query: 1 MREGTFMRXXXXXXXXXXXXXXXXXXSPLTMSGPMHAPNQGTCTAGQQCDRLASVLIXXX 60 +REG MR +PLT+S P GTC+AGQQCDRLA+VL+ Sbjct: 7 VREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAG-GTCSAGQQCDRLAAVLMPDT 65 Query: 61 XXXXXXXXXXXXITPAEAPQA--MLPGLEQ--------------PPAVPAAARIXXXXXX 104 + P A + PGL PPAVP I Sbjct: 66 ATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIPGAAGP 125 Query: 105 XXXXXXXXXALTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPTIXXXXXXXXXXXX 164 L A P Sbjct: 126 ALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIGIPGVPD----PITGVNTAAAVVNGV 181 Query: 165 LGITGSVTSAVTSGALAVTYVMLAYNTLRSAGILPDLSVPISSVTNMXXXXXXXXXXXXX 224 LG+ G+ VT+ A+AVTY++LA N L S+GILP S+V ++ Sbjct: 182 LGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASL---LLPGAQSAAA 238 Query: 225 XXXXXXXXXXXXXXXXXXVTLASMGGIPGLSLPALSGVSPATLLTEAANA-----LPGLA 279 + +A+ G+PG+ P+L GVSP L+ AA A LPGLA Sbjct: 239 ALPAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLA 298 Query: 280 SVSTTDLLAVAVMGGAPQLASMLPMLQAALP-GMSATDVMAMVTXXXXXXXXXXXXXXAI 338 +S +L A+ V GG P LA+ A LP G++ D + Sbjct: 299 GMSPAELTAL-VAGGLPMLAA------AGLPAGLAGVDPATLAAALPALAAGGLPPGLPA 351 Query: 339 LPGGDP 344 LPG DP Sbjct: 352 LPGVDP 357 >tr|C6DVU9|C6DVU9_MYCTK Tax_Id=478434 SubName: Full=Membrane protein;[Mycobacterium tuberculosis] Length = 432 Score = 89.4 bits (220), Expect = 9e-16 Identities = 97/366 (26%), Positives = 129/366 (35%), Gaps = 37/366 (10%) Query: 1 MREGTFMRXXXXXXXXXXXXXXXXXXSPLTMSGPMHAPNQGTCTAGQQCDRLASVLIXXX 60 +REG MR +PLT+S P GTC+AGQQCDRLA+VL+ Sbjct: 20 VREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAG-GTCSAGQQCDRLAAVLMPDT 78 Query: 61 XXXXXXXXXXXXITPAEAPQA--MLPGLEQ--------------PPAVPAAARIXXXXXX 104 + P A + PGL PPAVP I Sbjct: 79 ATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIPGAAGP 138 Query: 105 XXXXXXXXXALTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPTIXXXXXXXXXXXX 164 L A P Sbjct: 139 ALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIGIPGVPD----PITGVNTAAAVVNGV 194 Query: 165 LGITGSVTSAVTSGALAVTYVMLAYNTLRSAGILPDLSVPISSVTNMXXXXXXXXXXXXX 224 LG+ G+ VT+ A+AVTY++LA N L S+GILP S+V ++ Sbjct: 195 LGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASL---LLPGAQSAAA 251 Query: 225 XXXXXXXXXXXXXXXXXXVTLASMGGIPGLSLPALSGVSPATLLTEAANA-----LPGLA 279 + +A+ G+PG+ P+L GVSP L+ AA A LPGLA Sbjct: 252 ALPAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLA 311 Query: 280 SVSTTDLLAVAVMGGAPQLASMLPMLQAALP-GMSATDVMAMVTXXXXXXXXXXXXXXAI 338 +S +L A+ V GG P LA+ A LP G++ D + Sbjct: 312 GMSPAELTAL-VAGGLPMLAA------AGLPAGLAGVDPATLAAALPALAAGGLPPGLPA 364 Query: 339 LPGGDP 344 LPG DP Sbjct: 365 LPGVDP 370 >tr|C1ALZ5|C1ALZ5_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 419 Score = 89.4 bits (220), Expect = 9e-16 Identities = 97/366 (26%), Positives = 129/366 (35%), Gaps = 37/366 (10%) Query: 1 MREGTFMRXXXXXXXXXXXXXXXXXXSPLTMSGPMHAPNQGTCTAGQQCDRLASVLIXXX 60 +REG MR +PLT+S P GTC+AGQQCDRLA+VL+ Sbjct: 7 VREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAG-GTCSAGQQCDRLAAVLMPDT 65 Query: 61 XXXXXXXXXXXXITPAEAPQA--MLPGLEQ--------------PPAVPAAARIXXXXXX 104 + P A + PGL PPAVP I Sbjct: 66 ATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIPGAAGP 125 Query: 105 XXXXXXXXXALTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPTIXXXXXXXXXXXX 164 L A P Sbjct: 126 ALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIGIPGVPD----PITGVNTAAAVVNGV 181 Query: 165 LGITGSVTSAVTSGALAVTYVMLAYNTLRSAGILPDLSVPISSVTNMXXXXXXXXXXXXX 224 LG+ G+ VT+ A+AVTY++LA N L S+GILP S+V ++ Sbjct: 182 LGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASL---LLPGAQSAAA 238 Query: 225 XXXXXXXXXXXXXXXXXXVTLASMGGIPGLSLPALSGVSPATLLTEAANA-----LPGLA 279 + +A+ G+PG+ P+L GVSP L+ AA A LPGLA Sbjct: 239 ALPAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLA 298 Query: 280 SVSTTDLLAVAVMGGAPQLASMLPMLQAALP-GMSATDVMAMVTXXXXXXXXXXXXXXAI 338 +S +L A+ V GG P LA+ A LP G++ D + Sbjct: 299 GMSPAELTAL-VAGGLPMLAA------AGLPAGLAGVDPATLAAALPALAAGGLPPGLPA 351 Query: 339 LPGGDP 344 LPG DP Sbjct: 352 LPGVDP 357 >tr|A5U147|A5U147_MYCTA Tax_Id=419947 SubName: Full=Putative membrane protein;[Mycobacterium tuberculosis] Length = 432 Score = 89.4 bits (220), Expect = 9e-16 Identities = 97/366 (26%), Positives = 129/366 (35%), Gaps = 37/366 (10%) Query: 1 MREGTFMRXXXXXXXXXXXXXXXXXXSPLTMSGPMHAPNQGTCTAGQQCDRLASVLIXXX 60 +REG MR +PLT+S P GTC+AGQQCDRLA+VL+ Sbjct: 20 VREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAG-GTCSAGQQCDRLAAVLMPDT 78 Query: 61 XXXXXXXXXXXXITPAEAPQA--MLPGLEQ--------------PPAVPAAARIXXXXXX 104 + P A + PGL PPAVP I Sbjct: 79 ATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIPGAAGP 138 Query: 105 XXXXXXXXXALTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPTIXXXXXXXXXXXX 164 L A P Sbjct: 139 ALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIGIPGVPD----PITGVNTAAAVVNGV 194 Query: 165 LGITGSVTSAVTSGALAVTYVMLAYNTLRSAGILPDLSVPISSVTNMXXXXXXXXXXXXX 224 LG+ G+ VT+ A+AVTY++LA N L S+GILP S+V ++ Sbjct: 195 LGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASL---LLPGAQSAAA 251 Query: 225 XXXXXXXXXXXXXXXXXXVTLASMGGIPGLSLPALSGVSPATLLTEAANA-----LPGLA 279 + +A+ G+PG+ P+L GVSP L+ AA A LPGLA Sbjct: 252 ALPAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLA 311 Query: 280 SVSTTDLLAVAVMGGAPQLASMLPMLQAALP-GMSATDVMAMVTXXXXXXXXXXXXXXAI 338 +S +L A+ V GG P LA+ A LP G++ D + Sbjct: 312 GMSPAELTAL-VAGGLPMLAA------AGLPAGLAGVDPATLAAALPALAAGGLPPGLPA 364 Query: 339 LPGGDP 344 LPG DP Sbjct: 365 LPGVDP 370 >tr|A1KHE2|A1KHE2_MYCBP Tax_Id=410289 SubName: Full=Probable membrane protein;[Mycobacterium bovis] Length = 419 Score = 89.4 bits (220), Expect = 9e-16 Identities = 97/366 (26%), Positives = 129/366 (35%), Gaps = 37/366 (10%) Query: 1 MREGTFMRXXXXXXXXXXXXXXXXXXSPLTMSGPMHAPNQGTCTAGQQCDRLASVLIXXX 60 +REG MR +PLT+S P GTC+AGQQCDRLA+VL+ Sbjct: 7 VREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAG-GTCSAGQQCDRLAAVLMPDT 65 Query: 61 XXXXXXXXXXXXITPAEAPQA--MLPGLEQ--------------PPAVPAAARIXXXXXX 104 + P A + PGL PPAVP I Sbjct: 66 ATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIPGAAGP 125 Query: 105 XXXXXXXXXALTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPTIXXXXXXXXXXXX 164 L A P Sbjct: 126 ALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIGIPGVPD----PITGVNTAAAVVNGV 181 Query: 165 LGITGSVTSAVTSGALAVTYVMLAYNTLRSAGILPDLSVPISSVTNMXXXXXXXXXXXXX 224 LG+ G+ VT+ A+AVTY++LA N L S+GILP S+V ++ Sbjct: 182 LGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASL---LLPGAQSAAA 238 Query: 225 XXXXXXXXXXXXXXXXXXVTLASMGGIPGLSLPALSGVSPATLLTEAANA-----LPGLA 279 + +A+ G+PG+ P+L GVSP L+ AA A LPGLA Sbjct: 239 ALPAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLA 298 Query: 280 SVSTTDLLAVAVMGGAPQLASMLPMLQAALP-GMSATDVMAMVTXXXXXXXXXXXXXXAI 338 +S +L A+ V GG P LA+ A LP G++ D + Sbjct: 299 GMSPAELTAL-VAGGLPMLAA------AGLPAGLAGVDPATLAAALPALAAGGLPPGLPA 351 Query: 339 LPGGDP 344 LPG DP Sbjct: 352 LPGVDP 357 >tr|A5WL27|A5WL27_MYCTF Tax_Id=336982 SubName: Full=Hypothetical membrane protein;[Mycobacterium tuberculosis] Length = 432 Score = 89.4 bits (220), Expect = 9e-16 Identities = 97/366 (26%), Positives = 129/366 (35%), Gaps = 37/366 (10%) Query: 1 MREGTFMRXXXXXXXXXXXXXXXXXXSPLTMSGPMHAPNQGTCTAGQQCDRLASVLIXXX 60 +REG MR +PLT+S P GTC+AGQQCDRLA+VL+ Sbjct: 20 VREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAG-GTCSAGQQCDRLAAVLMPDT 78 Query: 61 XXXXXXXXXXXXITPAEAPQA--MLPGLEQ--------------PPAVPAAARIXXXXXX 104 + P A + PGL PPAVP I Sbjct: 79 ATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIPGAAGP 138 Query: 105 XXXXXXXXXALTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPTIXXXXXXXXXXXX 164 L A P Sbjct: 139 ALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIGIPGVPD----PITGVNTAAAVVNGV 194 Query: 165 LGITGSVTSAVTSGALAVTYVMLAYNTLRSAGILPDLSVPISSVTNMXXXXXXXXXXXXX 224 LG+ G+ VT+ A+AVTY++LA N L S+GILP S+V ++ Sbjct: 195 LGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASL---LLPGAQSAAA 251 Query: 225 XXXXXXXXXXXXXXXXXXVTLASMGGIPGLSLPALSGVSPATLLTEAANA-----LPGLA 279 + +A+ G+PG+ P+L GVSP L+ AA A LPGLA Sbjct: 252 ALPAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLA 311 Query: 280 SVSTTDLLAVAVMGGAPQLASMLPMLQAALP-GMSATDVMAMVTXXXXXXXXXXXXXXAI 338 +S +L A+ V GG P LA+ A LP G++ D + Sbjct: 312 GMSPAELTAL-VAGGLPMLAA------AGLPAGLAGVDPATLAAALPALAAGGLPPGLPA 364 Query: 339 LPGGDP 344 LPG DP Sbjct: 365 LPGVDP 370 >tr|Q8VK97|Q8VK97_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 437 Score = 76.3 bits (186), Expect = 8e-12 Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 16/186 (8%) Query: 165 LGITGSVTSAVTSGALAVTYVMLAYNTLRSAGILPDLSVPISSVTNMXXXXXXXXXXXXX 224 LG+ G+ VT+ A+AVTY++LA N L S+GILP S+V ++ Sbjct: 200 LGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASL---LLPGAQSAAA 256 Query: 225 XXXXXXXXXXXXXXXXXXVTLASMGGIPGLSLPALSGVSPATLLTEAANA-----LPGLA 279 + +A+ G+PG+ P+L GVSP L+ AA A LPGLA Sbjct: 257 ALPAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLA 316 Query: 280 SVSTTDLLAVAVMGGAPQLASMLPMLQAALP-GMSATDVMAMVTXXXXXXXXXXXXXXAI 338 +S +L A+ V GG P LA+ A LP G++ D + Sbjct: 317 GMSPAELTAL-VAGGLPMLAA------AGLPAGLAGVDPATLAAALPALAAGGLPPGLPA 369 Query: 339 LPGGDP 344 LPG DP Sbjct: 370 LPGVDP 375 Score = 47.8 bits (112), Expect = 0.003 Identities = 34/100 (34%), Positives = 43/100 (43%), Gaps = 3/100 (3%) Query: 1 MREGTFMRXXXXXXXXXXXXXXXXXXSPLTMSGPMHAPNQGTCTAGQQCDRLASVLIXXX 60 +REG MR +PLT+S P GTC+AGQQCD LA+VL+ Sbjct: 20 VREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAG-GTCSAGQQCDLLAAVLMPDT 78 Query: 61 XXXXXXXXXXXXITPAEAPQA--MLPGLEQPPAVPAAARI 98 + P A + PGL P VPAAA + Sbjct: 79 ATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVPAAAAV 118 >tr|Q0A594|Q0A594_ALHEH Tax_Id=187272 SubName: Full=Diguanylate cyclase;[Alkalilimnicola ehrlichei] Length = 397 Score = 36.2 bits (82), Expect = 8.8 Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 6/83 (7%) Query: 243 VTLASMGGIPGLSLPALSGVS--PATLLTEAANALPGLASVSTTDLLAVAVMGGAPQLAS 300 V+ A G L LSG++ P T L A ALP +A+ + T LL +MG + QL + Sbjct: 146 VSAAMAAGYAYLPFVMLSGLAVFPLTALEAAVFALPVVAAQALTGLLGQDLMGWSNQLGA 205 Query: 301 ----MLPMLQAALPGMSATDVMA 319 +L + AAL GMS MA Sbjct: 206 TWLLVLIAVVAALAGMSQLHFMA 228 >tr|B1M4G3|B1M4G3_METRJ Tax_Id=426355 SubName: Full=Cysteine desulfurase, SufS subfamily; Flags: Precursor;[Methylobacterium radiotolerans] Length = 664 Score = 36.2 bits (82), Expect = 8.8 Identities = 21/54 (38%), Positives = 29/54 (53%) Query: 250 GIPGLSLPALSGVSPATLLTEAANALPGLASVSTTDLLAVAVMGGAPQLASMLP 303 G+PGLS P L +PA+ A A+P + S +L + GAP LA+ LP Sbjct: 106 GLPGLSGPTLPNRAPASPAFPDAAAIPPVHPASPRPVLPDFSLAGAPALAAALP 159 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.317 0.130 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,545,859,510 Number of extensions: 36012757 Number of successful extensions: 131221 Number of sequences better than 10.0: 11 Number of HSP's gapped: 131945 Number of HSP's successfully gapped: 20 Length of query: 448 Length of database: 3,846,993,858 Length adjustment: 141 Effective length of query: 307 Effective length of database: 2,257,190,235 Effective search space: 692957402145 Effective search space used: 692957402145 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 82 (36.2 bits)