BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4573 (770 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HEF3|B2HEF3_MYCMM Tax_Id=216594 SubName: Full=ATP dependent... 1479 0.0 tr|A0PVP8|A0PVP8_MYCUA Tax_Id=362242 SubName: Full=ATP dependent... 1469 0.0 tr|A0QBM3|A0QBM3_MYCA1 Tax_Id=243243 SubName: Full=DNA ligase;[M... 1217 0.0 tr|Q742F5|Q742F5_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 1216 0.0 sp|P59971|Y963_MYCBO Tax_Id=1765 RecName: Full=Putative DNA liga... 1213 0.0 tr|C6DWF2|C6DWF2_MYCTK Tax_Id=478434 SubName: Full=ATP dependent... 1213 0.0 tr|C1ALS4|C1ALS4_MYCBT Tax_Id=561275 SubName: Full=Putative ATP ... 1213 0.0 tr|A1KH72|A1KH72_MYCBP Tax_Id=410289 SubName: Full=Possible ATP ... 1213 0.0 tr|A2VGN5|A2VGN5_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 1213 0.0 tr|A5WKW0|A5WKW0_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 1212 0.0 sp|P71571|Y938_MYCTU Tax_Id=1773 RecName: Full=Putative DNA liga... 1210 0.0 tr|A5U0X8|A5U0X8_MYCTA Tax_Id=419947 SubName: Full=ATP dependant... 1210 0.0 tr|A4KFP0|A4KFP0_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 1210 0.0 tr|Q1B3S7|Q1B3S7_MYCSS Tax_Id=164756 SubName: Full=ATP dependent... 1080 0.0 tr|A1ULC1|A1ULC1_MYCSK Tax_Id=189918 SubName: Full=ATP dependent... 1080 0.0 tr|A3Q5S0|A3Q5S0_MYCSJ Tax_Id=164757 SubName: Full=ATP dependent... 1079 0.0 tr|A1TET8|A1TET8_MYCVP Tax_Id=350058 SubName: Full=ATP dependent... 1077 0.0 tr|A4T6Z6|A4T6Z6_MYCGI Tax_Id=350054 SubName: Full=ATP dependent... 1071 0.0 tr|A0R3R7|A0R3R7_MYCS2 Tax_Id=246196 SubName: Full=DNA ligase;[M... 1037 0.0 tr|B1MJG7|B1MJG7_MYCA9 Tax_Id=561007 SubName: Full=Putative ATP-... 978 0.0 tr|C3JDN2|C3JDN2_RHOER Tax_Id=596309 SubName: Full=ATP dependent... 853 0.0 tr|C1ATU5|C1ATU5_RHOOB Tax_Id=632772 (ligD)SubName: Full=ATP-dep... 843 0.0 tr|C0ZMH2|C0ZMH2_RHOE4 Tax_Id=234621 (ligD)SubName: Full=ATP-dep... 843 0.0 tr|Q0S6K7|Q0S6K7_RHOSR Tax_Id=101510 SubName: Full=DNA ligase (A... 841 0.0 tr|Q5Z219|Q5Z219_NOCFA Tax_Id=37329 SubName: Full=Putative ATP-d... 741 0.0 tr|C2AIA4|C2AIA4_TSUPA Tax_Id=521096 SubName: Full=DNA ligase D/... 737 0.0 tr|C8XIX5|C8XIX5_NAKMY Tax_Id=479431 SubName: Full=DNA polymeras... 722 0.0 tr|D0L6V5|D0L6V5_GORB4 Tax_Id=526226 SubName: Full=DNA polymeras... 695 0.0 tr|C5BY21|C5BY21_BEUC1 Tax_Id=471853 SubName: Full=DNA polymeras... 669 0.0 tr|A5CSR6|A5CSR6_CLAM3 Tax_Id=443906 SubName: Full=Putative unch... 657 0.0 tr|D1BEG9|D1BEG9_9MICO Tax_Id=446469 SubName: Full=DNA ligase D/... 627 e-177 tr|D1BV12|D1BV12_9MICO Tax_Id=446471 SubName: Full=DNA polymeras... 606 e-171 tr|B8HAQ8|B8HAQ8_ARTCA Tax_Id=452863 SubName: Full=DNA polymeras... 600 e-169 tr|A0JRM5|A0JRM5_ARTS2 Tax_Id=290399 SubName: Full=DNA ligase (A... 599 e-169 tr|A1R1J1|A1R1J1_ARTAT Tax_Id=290340 SubName: Full=ATP-dependent... 597 e-168 tr|C7M9M4|C7M9M4_BRAFD Tax_Id=446465 SubName: Full=DNA ligase D/... 595 e-168 tr|C7NKD9|C7NKD9_KYTSD Tax_Id=478801 SubName: Full=DNA ligase D/... 573 e-161 tr|C7Q6S2|C7Q6S2_CATAD Tax_Id=479433 SubName: Full=DNA polymeras... 367 4e-99 tr|C7MQ31|C7MQ31_SACVD Tax_Id=471857 SubName: Full=DNA ligase D/... 361 2e-97 tr|Q0RHK2|Q0RHK2_FRAAA Tax_Id=326424 SubName: Full=Putative unch... 348 2e-93 tr|Q09E36|Q09E36_STIAU Tax_Id=378806 (ligD)SubName: Full=DNA lig... 292 1e-76 tr|A9BWY5|A9BWY5_DELAS Tax_Id=398578 SubName: Full=DNA ligase D;... 284 3e-74 tr|Q7WIK6|Q7WIK6_BORBR Tax_Id=518 SubName: Full=Putative ATP-dep... 283 5e-74 tr|A1SG16|A1SG16_NOCSJ Tax_Id=196162 SubName: Full=ATP dependent... 271 3e-70 tr|A0LY41|A0LY41_GRAFK Tax_Id=411154 SubName: Full=ATP-dependent... 268 2e-69 tr|C0UAZ9|C0UAZ9_9ACTO Tax_Id=526225 SubName: Full=DNA polymeras... 266 1e-68 tr|C4RAY3|C4RAY3_9ACTO Tax_Id=219305 SubName: Full=ATP-dependent... 265 2e-68 tr|A1W8V8|A1W8V8_ACISJ Tax_Id=232721 SubName: Full=DNA ligase (A... 262 1e-67 tr|Q87ZG5|Q87ZG5_PSESM Tax_Id=323 SubName: Full=DNA ligase, ATP-... 261 3e-67 tr|Q46SV9|Q46SV9_RALEJ Tax_Id=264198 SubName: Full=ATP dependent... 254 3e-65 >tr|B2HEF3|B2HEF3_MYCMM Tax_Id=216594 SubName: Full=ATP dependent DNA ligase;[Mycobacterium marinum] Length = 770 Score = 1479 bits (3828), Expect = 0.0 Identities = 735/770 (95%), Positives = 735/770 (95%) Query: 1 MGSAQAWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRK 60 MGSAQAWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRK Sbjct: 1 MGSAQAWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRK 60 Query: 61 RWPNGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHV 120 RWPNGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHV Sbjct: 61 RWPNGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHV 120 Query: 121 PQWRFVAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPL 180 PQWRFVAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPL Sbjct: 121 PQWRFVAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPL 180 Query: 181 TSGSKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQ 240 TSGSKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQ Sbjct: 181 TSGSKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQ 240 Query: 241 NSGSKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXX 300 NSGSKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLT Sbjct: 241 NSGSKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTRDGDLIAALDAD 300 Query: 301 XXXXXXXXKYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVS 360 KYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVS Sbjct: 301 LPGDDRLLKYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVS 360 Query: 361 WAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDD 420 WAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDD Sbjct: 361 WAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDD 420 Query: 421 SRNGSEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVA 480 SRNGSEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVA Sbjct: 421 SRNGSEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVA 480 Query: 481 GLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDG 540 GLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDG Sbjct: 481 GLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDG 540 Query: 541 ELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGN 600 ELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFLDG ETLGSAGN Sbjct: 541 ELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGRSLLRARYRDRRKLLETLGSAGN 600 Query: 601 LIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGW 660 LIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGW Sbjct: 601 LIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGW 660 Query: 661 RVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAAL 720 RVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAAL Sbjct: 661 RVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAAL 720 Query: 721 PAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 PAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE Sbjct: 721 PAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 >tr|A0PVP8|A0PVP8_MYCUA Tax_Id=362242 SubName: Full=ATP dependent DNA ligase;[Mycobacterium ulcerans] Length = 770 Score = 1469 bits (3803), Expect = 0.0 Identities = 730/770 (94%), Positives = 731/770 (94%) Query: 1 MGSAQAWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRK 60 MGSAQAWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRK Sbjct: 1 MGSAQAWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRK 60 Query: 61 RWPNGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHV 120 RWPNGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHV Sbjct: 61 RWPNGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHV 120 Query: 121 PQWRFVAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPL 180 PQWRFVAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPL Sbjct: 121 PQWRFVAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPL 180 Query: 181 TSGSKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQ 240 TSGSKGLH YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQ Sbjct: 181 TSGSKGLHFYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQ 240 Query: 241 NSGSKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXX 300 NSGSKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLT Sbjct: 241 NSGSKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTRDGDLIAALDAD 300 Query: 301 XXXXXXXXKYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVS 360 KYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLH DFRLERDGVLVS Sbjct: 301 LPGDDRLLKYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHDDFRLERDGVLVS 360 Query: 361 WAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDD 420 WAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDD Sbjct: 361 WAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDD 420 Query: 421 SRNGSEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVA 480 SRNG+EKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVA Sbjct: 421 SRNGAEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVA 480 Query: 481 GLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDG 540 GLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVT EYPQLRSLAADLADHHVVLDG Sbjct: 481 GLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTTEYPQLRSLAADLADHHVVLDG 540 Query: 541 ELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGN 600 ELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFLDG ETLGSAGN Sbjct: 541 ELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGRSLLRARYRDRRKLLETLGSAGN 600 Query: 601 LIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGW 660 LIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGW Sbjct: 601 LIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGW 660 Query: 661 RVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAAL 720 RVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAAL Sbjct: 661 RVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAAL 720 Query: 721 PAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 PAREAKGVTFV PTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE Sbjct: 721 PAREAKGVTFVVPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 >tr|A0QBM3|A0QBM3_MYCA1 Tax_Id=243243 SubName: Full=DNA ligase;[Mycobacterium avium] Length = 766 Score = 1217 bits (3148), Expect = 0.0 Identities = 602/774 (77%), Positives = 648/774 (83%), Gaps = 12/774 (1%) Query: 1 MGSAQAWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRK 60 M + +AWP P+V LTNADKVLYPATGTTK+DVF YYT IA+VMIPHIAGRP TRK Sbjct: 1 MNAPRAWPAEPTATPRVKLTNADKVLYPATGTTKADVFDYYTRIADVMIPHIAGRPVTRK 60 Query: 61 RWPNGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHV 120 RWPNGVDQ SFFEKQLASSAPDWLPRASV HRSGTTTYPIIDSATGLAWIAQQAALEVHV Sbjct: 61 RWPNGVDQESFFEKQLASSAPDWLPRASVTHRSGTTTYPIIDSATGLAWIAQQAALEVHV 120 Query: 121 PQWRFVAEWT-SKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLP 179 PQWRFVAEWT S+ E L PGPATRLVFDLDPGEGVTMAQLA+VARAVRDL+ IGL T P Sbjct: 121 PQWRFVAEWTRSRAEELKPGPATRLVFDLDPGEGVTMAQLAEVARAVRDLIDGIGLQTFP 180 Query: 180 LTSGSKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWS 239 LTSGSKGLHLYTPL EPVSSKGATVLAKRVAQQLE MP LVT+TMTKSLRAGK+F+DWS Sbjct: 181 LTSGSKGLHLYTPLTEPVSSKGATVLAKRVAQQLEKTMPKLVTSTMTKSLRAGKIFVDWS 240 Query: 240 QNSGSKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXX 299 QN+GSKTTIAPYSLRGR+ PTVAAPR+W+ELDDP LR L YDEVL R+ Sbjct: 241 QNNGSKTTIAPYSLRGRDHPTVAAPRTWDELDDPALRHLRYDEVLTRVARDGDLLAELDA 300 Query: 300 XXXXXXXXX---KYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDG 356 KYRSMR+ASKTPEPVP A+P G+GNTFVIQEHHARRLHYDFRLERDG Sbjct: 301 SDNQTPVPDRLTKYRSMRDASKTPEPVPAAKPAAGRGNTFVIQEHHARRLHYDFRLERDG 360 Query: 357 VLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEK 416 VLVSWAVPKNLP+T +VNHLAVHTEDHPLEY FEG IPKGEYGAG+V+IWDSGTYD EK Sbjct: 361 VLVSWAVPKNLPDTPAVNHLAVHTEDHPLEYGGFEGVIPKGEYGAGRVVIWDSGTYDAEK 420 Query: 417 FRDDSRNGSEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSH 476 F+DD EVIVNLHG +ISGRYALIQT GDQWLAHRMKDQ FDFDT+APML +H Sbjct: 421 FQDD--------EVIVNLHGRKISGRYALIQTEGDQWLAHRMKDQNVFDFDTIAPMLATH 472 Query: 477 GSVAGLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHV 536 GSV+ L++ QWAFEGKWDGYRLLVEADHG LR+RSR GR+VT EY +LRSLA L +HH Sbjct: 473 GSVSALKASQWAFEGKWDGYRLLVEADHGTLRVRSRRGREVTGEYRELRSLAKALEEHHA 532 Query: 537 VLDGELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLG 596 VLDGE V LD GVP+F+EMQNR ++ R+EFWAFDLL+LDG E L Sbjct: 533 VLDGEAVVLDKRGVPNFHEMQNRGKSARVEFWAFDLLYLDGRSLLRARYRDRRKLLEMLA 592 Query: 597 SAGNLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVV 656 S G+L VPELLPGDG +AL S +RGWEGVIAKRRDS YQPGRRSS+WIKDKHWNTQEVV Sbjct: 593 SGGDLTVPELLPGDGDQALRQSAERGWEGVIAKRRDSTYQPGRRSSSWIKDKHWNTQEVV 652 Query: 657 IGGWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPF 716 IGGW+ GEGGRSSGIGSLLMGIPGP GLHFAGRVGTGFTERDLANLKKTLAPL TD+SPF Sbjct: 653 IGGWKAGEGGRSSGIGSLLMGIPGPGGLHFAGRVGTGFTERDLANLKKTLAPLRTDQSPF 712 Query: 717 DAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 DA LP EAKGVTFV P LVGEVRYSEWTPDDRLRQSSWRGLRPDK SEVVRE Sbjct: 713 DAPLPRSEAKGVTFVEPVLVGEVRYSEWTPDDRLRQSSWRGLRPDKEASEVVRE 766 >tr|Q742F5|Q742F5_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 764 Score = 1216 bits (3146), Expect = 0.0 Identities = 602/772 (77%), Positives = 647/772 (83%), Gaps = 10/772 (1%) Query: 1 MGSAQAWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRK 60 M + +AWP P+V LTNADKVLYPATGTTK+DVF YYT IA+VMIPHIAGRP TRK Sbjct: 1 MNAPRAWPAEPTATPRVKLTNADKVLYPATGTTKADVFDYYTRIADVMIPHIAGRPVTRK 60 Query: 61 RWPNGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHV 120 RWPNGVDQ SFFEKQLASSAPDWLPRASV HRSGTTTYPIIDSATGLAWIAQQAALEVHV Sbjct: 61 RWPNGVDQESFFEKQLASSAPDWLPRASVTHRSGTTTYPIIDSATGLAWIAQQAALEVHV 120 Query: 121 PQWRFVAEWT-SKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLP 179 PQWRFVAEWT S+ E L PGPATRLVFDLDPGEGVTMAQLA+VARAVRDL+ IGL T P Sbjct: 121 PQWRFVAEWTRSRAEELKPGPATRLVFDLDPGEGVTMAQLAEVARAVRDLIDGIGLQTFP 180 Query: 180 LTSGSKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWS 239 LTSGSKGLHLYTPL EPVSSKGATVLAKRVAQQLE MP LVT+TMTKSLRAGK+F+DWS Sbjct: 181 LTSGSKGLHLYTPLTEPVSSKGATVLAKRVAQQLEKTMPKLVTSTMTKSLRAGKIFVDWS 240 Query: 240 QNSGSKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXX 299 QN+GSKTTIAPYSLRGR+ PTVAAPR+W+ELDDP LR L YDEVL R+ Sbjct: 241 QNNGSKTTIAPYSLRGRDHPTVAAPRTWDELDDPALRHLRYDEVLTRVARDGDLLAELDD 300 Query: 300 XXXXXXXXX-KYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVL 358 KYRSMR+ASKTPEPVP A+P GQGNTFVIQEHHARRLHYDFRLERDGVL Sbjct: 301 NQTPVPDRLTKYRSMRDASKTPEPVPDAKPAAGQGNTFVIQEHHARRLHYDFRLERDGVL 360 Query: 359 VSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFR 418 VSWAVPKNLP+T +VNHLAVHTEDHPLEY FEG IPKGEYGAG+V+IWDSGTYD EKF+ Sbjct: 361 VSWAVPKNLPDTPAVNHLAVHTEDHPLEYGGFEGVIPKGEYGAGRVVIWDSGTYDAEKFQ 420 Query: 419 DDSRNGSEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGS 478 DD EVIVNLHG +ISGRYALIQT GDQWLAHRMKDQ F+FDT+APML +HGS Sbjct: 421 DD--------EVIVNLHGRKISGRYALIQTQGDQWLAHRMKDQNVFEFDTIAPMLATHGS 472 Query: 479 VAGLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVL 538 V+ L++ QWAFEGKWDGYRLLVEADHG LR+RSR GR+VT EY +LRSLA L +HH VL Sbjct: 473 VSALKASQWAFEGKWDGYRLLVEADHGTLRVRSRRGREVTGEYRELRSLAKALEEHHAVL 532 Query: 539 DGELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSA 598 DGE V LD GVP+F+EMQNR ++ R+EFWAFDLL+LDG E L S Sbjct: 533 DGEAVVLDKRGVPNFHEMQNRGKSARVEFWAFDLLYLDGRSLLRARYRDRRKLLEMLASG 592 Query: 599 GNLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIG 658 G L VPELLPGDG +AL S +RGWEGVIAKRRDS YQPGRRSS+WIKDKHWNTQEVVIG Sbjct: 593 GALTVPELLPGDGDQALRQSAERGWEGVIAKRRDSTYQPGRRSSSWIKDKHWNTQEVVIG 652 Query: 659 GWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDA 718 GW+ GEGGRSSGIGSLLMGIPGP GLHFAGRVGTGFTERDLANLKKTLAPL TD+SPFDA Sbjct: 653 GWKAGEGGRSSGIGSLLMGIPGPGGLHFAGRVGTGFTERDLANLKKTLAPLRTDQSPFDA 712 Query: 719 ALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 LP EAKGVTFV P LVGEVRYSEWTPDDRLRQSSWRGLRPDK SEVVRE Sbjct: 713 PLPRSEAKGVTFVEPVLVGEVRYSEWTPDDRLRQSSWRGLRPDKEASEVVRE 764 >sp|P59971|Y963_MYCBO Tax_Id=1765 RecName: Full=Putative DNA ligase-like protein Mb0963;[Mycobacterium bovis] Length = 759 Score = 1213 bits (3139), Expect = 0.0 Identities = 600/764 (78%), Positives = 650/764 (85%), Gaps = 9/764 (1%) Query: 10 GQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQA 69 G A+ +VTLTNADKVLYPATGTTKSD+F YY G+AEVM+ HIAGRPATRKRWPNGVDQ Sbjct: 2 GSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQP 61 Query: 70 SFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW 129 +FFEKQLA SAP WL RA+V HRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE Sbjct: 62 AFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE- 120 Query: 130 TSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHL 189 GE L PGPATRLVFDLDPGEGV MAQLA+VARAVRDLLADIGL T P+TSGSKGLHL Sbjct: 121 PGSGE-LNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHL 179 Query: 190 YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIA 249 YTPLDEPVSS+GATVLAKRVAQ+LE MPALVT+TMTKSLRAGKVF+DWSQNSGSKTTIA Sbjct: 180 YTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIA 239 Query: 250 PYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXK 309 PYSLRGR PTVAAPR+W ELDDP LRQL+YDEVL R+ + Sbjct: 240 PYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTR 299 Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 YR MR+ASKTPEP+P A+PV G GNTFVIQEHHARR HYDFRLERDGVLVSWAVPKNLP+ Sbjct: 300 YRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLERDGVLVSWAVPKNLPD 359 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 TSVNHLA+HTEDHPLEYATFEG IP GEYGAGKVIIWDSGTYDTEKF DD G E Sbjct: 360 NTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTG----E 415 Query: 430 VIVNLHGSRISGRYALIQTNGDQWLAHRMK---DQTAFDFDTLAPMLTSHGSVAGLESGQ 486 VIVNLHG RISGRYALI+TNGD+WLAHR+K DQ F+FD LAPML +HG+VAGL++ Q Sbjct: 416 VIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQ 475 Query: 487 WAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALD 546 WAFEGKWDGYRLLVEADHGA+RLRSRSGRDVTAEYPQLR+LA DLADHHVVLDGE V LD Sbjct: 476 WAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRALAEDLADHHVVLDGEAVVLD 535 Query: 547 SSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPEL 606 SSGVPSF++MQNR R TR+EFWAFDLL+LDG ETL +A +L VPEL Sbjct: 536 SSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPEL 595 Query: 607 LPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGG 666 LPGDGA+A A S K GWEGVIAKRRDS YQPGRR ++W+KDKHWNTQEVVIGGWR GEGG Sbjct: 596 LPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGG 655 Query: 667 RSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAK 726 RSSG+GSLLMGIPGP GL FAGRVGTG +ER+LANLK+ LAPLHTDESPFD LPAR+AK Sbjct: 656 RSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAK 715 Query: 727 GVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 G+T+V P LV EVRYSEWTP+ RLRQSSWRGLRPDK PSEVVRE Sbjct: 716 GITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE 759 >tr|C6DWF2|C6DWF2_MYCTK Tax_Id=478434 SubName: Full=ATP dependent DNA ligase;[Mycobacterium tuberculosis] Length = 759 Score = 1213 bits (3139), Expect = 0.0 Identities = 600/764 (78%), Positives = 650/764 (85%), Gaps = 9/764 (1%) Query: 10 GQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQA 69 G A+ +VTLTNADKVLYPATGTTKSD+F YY G+AEVM+ HIAGRPATRKRWPNGVDQ Sbjct: 2 GSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQP 61 Query: 70 SFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW 129 +FFEKQLA SAP WL RA+V HRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE Sbjct: 62 AFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE- 120 Query: 130 TSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHL 189 GE L PGPATRLVFDLDPGEGV MAQLA+VARAVRDLLADIGL T P+TSGSKGLHL Sbjct: 121 PGSGE-LNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHL 179 Query: 190 YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIA 249 YTPLDEPVSS+GATVLAKRVAQ+LE MPALVT+TMTKSLRAGKVF+DWSQNSGSKTTIA Sbjct: 180 YTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIA 239 Query: 250 PYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXK 309 PYSLRGR PTVAAPR+W ELDDP LRQL+YDEVL R+ + Sbjct: 240 PYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTR 299 Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 YR MR+ASKTPEP+P A+PV G GNTFVIQEHHARR HYDFRLERDGVLVSWAVPKNLP+ Sbjct: 300 YRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLERDGVLVSWAVPKNLPD 359 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 TSVNHLA+HTEDHPLEYATFEG IP GEYGAGKVIIWDSGTYDTEKF DD G E Sbjct: 360 NTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTG----E 415 Query: 430 VIVNLHGSRISGRYALIQTNGDQWLAHRMK---DQTAFDFDTLAPMLTSHGSVAGLESGQ 486 VIVNLHG RISGRYALI+TNGD+WLAHR+K DQ F+FD LAPML +HG+VAGL++ Q Sbjct: 416 VIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQ 475 Query: 487 WAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALD 546 WAFEGKWDGYRLLVEADHGA+RLRSRSGRDVTAEYPQLR+LA DLADHHVVLDGE V LD Sbjct: 476 WAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRALAEDLADHHVVLDGEAVVLD 535 Query: 547 SSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPEL 606 SSGVPSF++MQNR R TR+EFWAFDLL+LDG ETL +A +L VPEL Sbjct: 536 SSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPEL 595 Query: 607 LPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGG 666 LPGDGA+A A S K GWEGVIAKRRDS YQPGRR ++W+KDKHWNTQEVVIGGWR GEGG Sbjct: 596 LPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGG 655 Query: 667 RSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAK 726 RSSG+GSLLMGIPGP GL FAGRVGTG +ER+LANLK+ LAPLHTDESPFD LPAR+AK Sbjct: 656 RSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAK 715 Query: 727 GVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 G+T+V P LV EVRYSEWTP+ RLRQSSWRGLRPDK PSEVVRE Sbjct: 716 GITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE 759 >tr|C1ALS4|C1ALS4_MYCBT Tax_Id=561275 SubName: Full=Putative ATP dependant DNA ligase; EC=6.5.1.1;[Mycobacterium bovis] Length = 759 Score = 1213 bits (3139), Expect = 0.0 Identities = 600/764 (78%), Positives = 650/764 (85%), Gaps = 9/764 (1%) Query: 10 GQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQA 69 G A+ +VTLTNADKVLYPATGTTKSD+F YY G+AEVM+ HIAGRPATRKRWPNGVDQ Sbjct: 2 GSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQP 61 Query: 70 SFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW 129 +FFEKQLA SAP WL RA+V HRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE Sbjct: 62 AFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE- 120 Query: 130 TSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHL 189 GE L PGPATRLVFDLDPGEGV MAQLA+VARAVRDLLADIGL T P+TSGSKGLHL Sbjct: 121 PGSGE-LNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHL 179 Query: 190 YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIA 249 YTPLDEPVSS+GATVLAKRVAQ+LE MPALVT+TMTKSLRAGKVF+DWSQNSGSKTTIA Sbjct: 180 YTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIA 239 Query: 250 PYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXK 309 PYSLRGR PTVAAPR+W ELDDP LRQL+YDEVL R+ + Sbjct: 240 PYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTR 299 Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 YR MR+ASKTPEP+P A+PV G GNTFVIQEHHARR HYDFRLERDGVLVSWAVPKNLP+ Sbjct: 300 YRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLERDGVLVSWAVPKNLPD 359 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 TSVNHLA+HTEDHPLEYATFEG IP GEYGAGKVIIWDSGTYDTEKF DD G E Sbjct: 360 NTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTG----E 415 Query: 430 VIVNLHGSRISGRYALIQTNGDQWLAHRMK---DQTAFDFDTLAPMLTSHGSVAGLESGQ 486 VIVNLHG RISGRYALI+TNGD+WLAHR+K DQ F+FD LAPML +HG+VAGL++ Q Sbjct: 416 VIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQ 475 Query: 487 WAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALD 546 WAFEGKWDGYRLLVEADHGA+RLRSRSGRDVTAEYPQLR+LA DLADHHVVLDGE V LD Sbjct: 476 WAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRALAEDLADHHVVLDGEAVVLD 535 Query: 547 SSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPEL 606 SSGVPSF++MQNR R TR+EFWAFDLL+LDG ETL +A +L VPEL Sbjct: 536 SSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPEL 595 Query: 607 LPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGG 666 LPGDGA+A A S K GWEGVIAKRRDS YQPGRR ++W+KDKHWNTQEVVIGGWR GEGG Sbjct: 596 LPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGG 655 Query: 667 RSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAK 726 RSSG+GSLLMGIPGP GL FAGRVGTG +ER+LANLK+ LAPLHTDESPFD LPAR+AK Sbjct: 656 RSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAK 715 Query: 727 GVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 G+T+V P LV EVRYSEWTP+ RLRQSSWRGLRPDK PSEVVRE Sbjct: 716 GITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE 759 >tr|A1KH72|A1KH72_MYCBP Tax_Id=410289 SubName: Full=Possible ATP dependant DNA ligase; EC=6.5.1.1;[Mycobacterium bovis] Length = 759 Score = 1213 bits (3139), Expect = 0.0 Identities = 600/764 (78%), Positives = 650/764 (85%), Gaps = 9/764 (1%) Query: 10 GQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQA 69 G A+ +VTLTNADKVLYPATGTTKSD+F YY G+AEVM+ HIAGRPATRKRWPNGVDQ Sbjct: 2 GSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQP 61 Query: 70 SFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW 129 +FFEKQLA SAP WL RA+V HRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE Sbjct: 62 AFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE- 120 Query: 130 TSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHL 189 GE L PGPATRLVFDLDPGEGV MAQLA+VARAVRDLLADIGL T P+TSGSKGLHL Sbjct: 121 PGSGE-LNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHL 179 Query: 190 YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIA 249 YTPLDEPVSS+GATVLAKRVAQ+LE MPALVT+TMTKSLRAGKVF+DWSQNSGSKTTIA Sbjct: 180 YTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIA 239 Query: 250 PYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXK 309 PYSLRGR PTVAAPR+W ELDDP LRQL+YDEVL R+ + Sbjct: 240 PYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTR 299 Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 YR MR+ASKTPEP+P A+PV G GNTFVIQEHHARR HYDFRLERDGVLVSWAVPKNLP+ Sbjct: 300 YRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLERDGVLVSWAVPKNLPD 359 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 TSVNHLA+HTEDHPLEYATFEG IP GEYGAGKVIIWDSGTYDTEKF DD G E Sbjct: 360 NTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTG----E 415 Query: 430 VIVNLHGSRISGRYALIQTNGDQWLAHRMK---DQTAFDFDTLAPMLTSHGSVAGLESGQ 486 VIVNLHG RISGRYALI+TNGD+WLAHR+K DQ F+FD LAPML +HG+VAGL++ Q Sbjct: 416 VIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQ 475 Query: 487 WAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALD 546 WAFEGKWDGYRLLVEADHGA+RLRSRSGRDVTAEYPQLR+LA DLADHHVVLDGE V LD Sbjct: 476 WAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRALAEDLADHHVVLDGEAVVLD 535 Query: 547 SSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPEL 606 SSGVPSF++MQNR R TR+EFWAFDLL+LDG ETL +A +L VPEL Sbjct: 536 SSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPEL 595 Query: 607 LPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGG 666 LPGDGA+A A S K GWEGVIAKRRDS YQPGRR ++W+KDKHWNTQEVVIGGWR GEGG Sbjct: 596 LPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGG 655 Query: 667 RSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAK 726 RSSG+GSLLMGIPGP GL FAGRVGTG +ER+LANLK+ LAPLHTDESPFD LPAR+AK Sbjct: 656 RSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAK 715 Query: 727 GVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 G+T+V P LV EVRYSEWTP+ RLRQSSWRGLRPDK PSEVVRE Sbjct: 716 GITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE 759 >tr|A2VGN5|A2VGN5_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 759 Score = 1213 bits (3139), Expect = 0.0 Identities = 600/764 (78%), Positives = 650/764 (85%), Gaps = 9/764 (1%) Query: 10 GQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQA 69 G A+ +VTLTNADKVLYPATGTTKSD+F YY G+AEVM+ HIAGRPATRKRWPNGVDQ Sbjct: 2 GSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQP 61 Query: 70 SFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW 129 +FFEKQLA SAP WL RA+V HRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE Sbjct: 62 AFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE- 120 Query: 130 TSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHL 189 GE L PGPATRLVFDLDPGEGV MAQLA+VARAVRDLLADIGL T P+TSGSKGLHL Sbjct: 121 PGSGE-LNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHL 179 Query: 190 YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIA 249 YTPLDEPVSS+GATVLAKRVAQ+LE MPALVT+TMTKSLRAGKVF+DWSQNSGSKTTIA Sbjct: 180 YTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIA 239 Query: 250 PYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXK 309 PYSLRGR PTVAAPR+W ELDDP LRQL+YDEVL R+ + Sbjct: 240 PYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTR 299 Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 YR MR+ASKTPEP+P A+PV G GNTFVIQEHHARR HYDFRLERDGVLVSWAVPKNLP+ Sbjct: 300 YRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLERDGVLVSWAVPKNLPD 359 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 TSVNHLA+HTEDHPLEYATFEG IP GEYGAGKVIIWDSGTYDTEKF DD G E Sbjct: 360 NTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTG----E 415 Query: 430 VIVNLHGSRISGRYALIQTNGDQWLAHRMK---DQTAFDFDTLAPMLTSHGSVAGLESGQ 486 VIVNLHG RISGRYALI+TNGD+WLAHR+K DQ F+FD LAPML +HG+VAGL++ Q Sbjct: 416 VIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQ 475 Query: 487 WAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALD 546 WAFEGKWDGYRLLVEADHGA+RLRSRSGRDVTAEYPQLR+LA DLADHHVVLDGE V LD Sbjct: 476 WAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRALAEDLADHHVVLDGEAVVLD 535 Query: 547 SSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPEL 606 SSGVPSF++MQNR R TR+EFWAFDLL+LDG ETL +A +L VPEL Sbjct: 536 SSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPEL 595 Query: 607 LPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGG 666 LPGDGA+A A S K GWEGVIAKRRDS YQPGRR ++W+KDKHWNTQEVVIGGWR GEGG Sbjct: 596 LPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGG 655 Query: 667 RSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAK 726 RSSG+GSLLMGIPGP GL FAGRVGTG +ER+LANLK+ LAPLHTDESPFD LPAR+AK Sbjct: 656 RSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAK 715 Query: 727 GVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 G+T+V P LV EVRYSEWTP+ RLRQSSWRGLRPDK PSEVVRE Sbjct: 716 GITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE 759 >tr|A5WKW0|A5WKW0_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ATP dependent DNA ligase;[Mycobacterium tuberculosis] Length = 759 Score = 1212 bits (3135), Expect = 0.0 Identities = 599/764 (78%), Positives = 649/764 (84%), Gaps = 9/764 (1%) Query: 10 GQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQA 69 G A+ +VTLTNADKVLYPATGTTKSD+F YY G+AEVM+ HIAGRPATRKRWPNGVDQ Sbjct: 2 GSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQP 61 Query: 70 SFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW 129 +FFEKQLA SAP WL RA+V HRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE Sbjct: 62 AFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE- 120 Query: 130 TSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHL 189 GE L PGPATRLVFDLDPGEGV MAQLA+VARAVRDLLADIGL T P+TSGSKGLHL Sbjct: 121 PGSGE-LNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHL 179 Query: 190 YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIA 249 YTPLDEPVSS+GATVLAKRVAQ+LE MPALVT+TMTKSLRAGKVF+DWSQNSGSKTTIA Sbjct: 180 YTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIA 239 Query: 250 PYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXK 309 PYSLRGR PTVAAPR+W ELDDP LRQL+YDEVL R+ + Sbjct: 240 PYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTR 299 Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 YR MR+ASKTPEP+P A+PV G GNTFVIQEHHARR HYDFRLERDGVLVSWAVPKNLP+ Sbjct: 300 YRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLERDGVLVSWAVPKNLPD 359 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 TSVNHLA+HTEDHPLEYATFEG IP GEYGAGKVIIWDSGTYDTEKF DD G E Sbjct: 360 NTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTG----E 415 Query: 430 VIVNLHGSRISGRYALIQTNGDQWLAHRMK---DQTAFDFDTLAPMLTSHGSVAGLESGQ 486 VIVNLHG RISGRYALI+TNGD+WLAHR+K DQ F+FD LAPML +HG+VAGL++ Q Sbjct: 416 VIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQ 475 Query: 487 WAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALD 546 WAFEGKWDGYRLLVEADHGA+RLRSRSGRDVTAEYPQLR+ A DLADHHVVLDGE V LD Sbjct: 476 WAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRAFAEDLADHHVVLDGEAVVLD 535 Query: 547 SSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPEL 606 SSGVPSF++MQNR R TR+EFWAFDLL+LDG ETL +A +L VPEL Sbjct: 536 SSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPEL 595 Query: 607 LPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGG 666 LPGDGA+A A S K GWEGVIAKRRDS YQPGRR ++W+KDKHWNTQEVVIGGWR GEGG Sbjct: 596 LPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGG 655 Query: 667 RSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAK 726 RSSG+GSLLMGIPGP GL FAGRVGTG +ER+LANLK+ LAPLHTDESPFD LPAR+AK Sbjct: 656 RSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAK 715 Query: 727 GVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 G+T+V P LV EVRYSEWTP+ RLRQSSWRGLRPDK PSEVVRE Sbjct: 716 GITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE 759 >sp|P71571|Y938_MYCTU Tax_Id=1773 RecName: Full=Putative DNA ligase-like protein Rv0938/MT0965;[Mycobacterium tuberculosis] Length = 759 Score = 1210 bits (3131), Expect = 0.0 Identities = 599/764 (78%), Positives = 649/764 (84%), Gaps = 9/764 (1%) Query: 10 GQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQA 69 G A+ +VTLTNADKVLYPATGTTKSD+F YY G+AEVM+ HIAGRPATRKRWPNGVDQ Sbjct: 2 GSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQP 61 Query: 70 SFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW 129 +FFEKQLA SAP WL RA+V HRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE Sbjct: 62 AFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE- 120 Query: 130 TSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHL 189 GE L PGPATRLVFDLDPGEGV MAQLA+VARAVRDLLADIGL T P+TSGSKGLHL Sbjct: 121 PGSGE-LNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHL 179 Query: 190 YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIA 249 YTPLDEPVSS+GATVLAKRVAQ+LE MPALVT+TMTKSLRAGKVF+DWSQNSGSKTTIA Sbjct: 180 YTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIA 239 Query: 250 PYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXK 309 PYSLRGR PTVAAPR+W ELDDP LRQL+YDEVL R+ + Sbjct: 240 PYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTR 299 Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 YR MR+ASKTPEP+P A+PV G GNTFVIQEHHARR HYDFRLE DGVLVSWAVPKNLP+ Sbjct: 300 YRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLECDGVLVSWAVPKNLPD 359 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 TSVNHLA+HTEDHPLEYATFEG IP GEYGAGKVIIWDSGTYDTEKF DD G E Sbjct: 360 NTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTG----E 415 Query: 430 VIVNLHGSRISGRYALIQTNGDQWLAHRMK---DQTAFDFDTLAPMLTSHGSVAGLESGQ 486 VIVNLHG RISGRYALI+TNGD+WLAHR+K DQ F+FD LAPML +HG+VAGL++ Q Sbjct: 416 VIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQ 475 Query: 487 WAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALD 546 WAFEGKWDGYRLLVEADHGA+RLRSRSGRDVTAEYPQLR+LA DLADHHVVLDGE V LD Sbjct: 476 WAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRALAEDLADHHVVLDGEAVVLD 535 Query: 547 SSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPEL 606 SSGVPSF++MQNR R TR+EFWAFDLL+LDG ETL +A +L VPEL Sbjct: 536 SSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPEL 595 Query: 607 LPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGG 666 LPGDGA+A A S K GWEGVIAKRRDS YQPGRR ++W+KDKHWNTQEVVIGGWR GEGG Sbjct: 596 LPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGG 655 Query: 667 RSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAK 726 RSSG+GSLLMGIPGP GL FAGRVGTG +ER+LANLK+ LAPLHTDESPFD LPAR+AK Sbjct: 656 RSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAK 715 Query: 727 GVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 G+T+V P LV EVRYSEWTP+ RLRQSSWRGLRPDK PSEVVRE Sbjct: 716 GITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE 759 >tr|A5U0X8|A5U0X8_MYCTA Tax_Id=419947 SubName: Full=ATP dependant DNA ligase;[Mycobacterium tuberculosis] Length = 759 Score = 1210 bits (3131), Expect = 0.0 Identities = 599/764 (78%), Positives = 649/764 (84%), Gaps = 9/764 (1%) Query: 10 GQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQA 69 G A+ +VTLTNADKVLYPATGTTKSD+F YY G+AEVM+ HIAGRPATRKRWPNGVDQ Sbjct: 2 GSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQP 61 Query: 70 SFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW 129 +FFEKQLA SAP WL RA+V HRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE Sbjct: 62 AFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE- 120 Query: 130 TSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHL 189 GE L PGPATRLVFDLDPGEGV MAQLA+VARAVRDLLADIGL T P+TSGSKGLHL Sbjct: 121 PGSGE-LNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHL 179 Query: 190 YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIA 249 YTPLDEPVSS+GATVLAKRVAQ+LE MPALVT+TMTKSLRAGKVF+DWSQNSGSKTTIA Sbjct: 180 YTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIA 239 Query: 250 PYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXK 309 PYSLRGR PTVAAPR+W ELDDP LRQL+YDEVL R+ + Sbjct: 240 PYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTR 299 Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 YR MR+ASKTPEP+P A+PV G GNTFVIQEHHARR HYDFRLE DGVLVSWAVPKNLP+ Sbjct: 300 YRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLECDGVLVSWAVPKNLPD 359 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 TSVNHLA+HTEDHPLEYATFEG IP GEYGAGKVIIWDSGTYDTEKF DD G E Sbjct: 360 NTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTG----E 415 Query: 430 VIVNLHGSRISGRYALIQTNGDQWLAHRMK---DQTAFDFDTLAPMLTSHGSVAGLESGQ 486 VIVNLHG RISGRYALI+TNGD+WLAHR+K DQ F+FD LAPML +HG+VAGL++ Q Sbjct: 416 VIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQ 475 Query: 487 WAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALD 546 WAFEGKWDGYRLLVEADHGA+RLRSRSGRDVTAEYPQLR+LA DLADHHVVLDGE V LD Sbjct: 476 WAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRALAEDLADHHVVLDGEAVVLD 535 Query: 547 SSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPEL 606 SSGVPSF++MQNR R TR+EFWAFDLL+LDG ETL +A +L VPEL Sbjct: 536 SSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPEL 595 Query: 607 LPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGG 666 LPGDGA+A A S K GWEGVIAKRRDS YQPGRR ++W+KDKHWNTQEVVIGGWR GEGG Sbjct: 596 LPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGG 655 Query: 667 RSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAK 726 RSSG+GSLLMGIPGP GL FAGRVGTG +ER+LANLK+ LAPLHTDESPFD LPAR+AK Sbjct: 656 RSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAK 715 Query: 727 GVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 G+T+V P LV EVRYSEWTP+ RLRQSSWRGLRPDK PSEVVRE Sbjct: 716 GITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE 759 >tr|A4KFP0|A4KFP0_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ATP dependent DNA ligase;[Mycobacterium tuberculosis str. Haarlem] Length = 759 Score = 1210 bits (3131), Expect = 0.0 Identities = 599/764 (78%), Positives = 649/764 (84%), Gaps = 9/764 (1%) Query: 10 GQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQA 69 G A+ +VTLTNADKVLYPATGTTKSD+F YY G+AEVM+ HIAGRPATRKRWPNGVDQ Sbjct: 2 GSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQP 61 Query: 70 SFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW 129 +FFEKQLA SAP WL RA+V HRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE Sbjct: 62 AFFEKQLALSAPPWLSRATVAHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE- 120 Query: 130 TSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHL 189 GE L PGPATRLVFDLDPGEGV MAQLA+VARAVRDLLADIGL T P+TSGSKGLHL Sbjct: 121 PGSGE-LNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHL 179 Query: 190 YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIA 249 YTPLDEPVSS+GATVLAKRVAQ+LE M ALVT+TMTKSLRAGKVF+DWSQNSGSKTTIA Sbjct: 180 YTPLDEPVSSRGATVLAKRVAQRLEQAMSALVTSTMTKSLRAGKVFVDWSQNSGSKTTIA 239 Query: 250 PYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXK 309 PYSLRGR PTVAAPR+W ELDDP LRQL+YDEVL R+ + Sbjct: 240 PYSLRGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTR 299 Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 YR MR+ASKTPEP+P A+PV G GNTFVIQEHHARR HYDFRLERDGVLVSWAVPKNLP+ Sbjct: 300 YRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLERDGVLVSWAVPKNLPD 359 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 TSVNHLA+HTEDHPLEYATFEG IP GEYGAGKVIIWDSGTYDTEKF DD G E Sbjct: 360 NTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTG----E 415 Query: 430 VIVNLHGSRISGRYALIQTNGDQWLAHRMK---DQTAFDFDTLAPMLTSHGSVAGLESGQ 486 VIVNLHG RISGRYALI+TNGD+WLAHR+K DQ F+FD LAPML +HG+VAGL++ Q Sbjct: 416 VIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQ 475 Query: 487 WAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALD 546 WAFEGKWDGYRLLVEADHGA+RLRSRSGRDVTAEYPQLR+LA DLADHHVVLDGE V LD Sbjct: 476 WAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRALAEDLADHHVVLDGEAVVLD 535 Query: 547 SSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPEL 606 SSGVPSF++MQNR R TR+EFWAFDLL+LDG ETL +A +L VPEL Sbjct: 536 SSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPEL 595 Query: 607 LPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGG 666 LPGDGA+A A S K GWEGVIAKRRDS YQPGRR ++W+KDKHWNTQEVVIGGWR GEGG Sbjct: 596 LPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGG 655 Query: 667 RSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAK 726 RSSG+GSLLMGIPGP GL FAGRVGTG +ER+LANLK+ LAPLHTDESPFD LPAR+AK Sbjct: 656 RSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAK 715 Query: 727 GVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 G+T+V P LV EVRYSEWTP+ RLRQSSWRGLRPDK PSEVVRE Sbjct: 716 GITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE 759 >tr|Q1B3S7|Q1B3S7_MYCSS Tax_Id=164756 SubName: Full=ATP dependent DNA ligase;[Mycobacterium sp.] Length = 758 Score = 1080 bits (2792), Expect = 0.0 Identities = 535/756 (70%), Positives = 595/756 (78%), Gaps = 5/756 (0%) Query: 16 QVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFFEKQ 75 +V LTN DKVLYPATGTTK++VF YY +AE M+PHIAGR TRKRWPNGV + FFEKQ Sbjct: 7 RVRLTNPDKVLYPATGTTKAEVFEYYVDVAEAMVPHIAGRAVTRKRWPNGVGELEFFEKQ 66 Query: 76 LASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSKGEI 135 LASSAPDWL R ++VH+SGTTTYPIID+ GLAWIAQQAALEVHVPQWRFV G Sbjct: 67 LASSAPDWLARGTIVHKSGTTTYPIIDTREGLAWIAQQAALEVHVPQWRFVGS----GGD 122 Query: 136 LTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTPLDE 195 LTPGPATR+VFDLDPGEGVT QL +VA VRDL+ DIGL+ PLTSGSKGLHLY PL E Sbjct: 123 LTPGPATRIVFDLDPGEGVTFRQLCEVAHEVRDLITDIGLTAYPLTSGSKGLHLYVPLKE 182 Query: 196 PVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYSLRG 255 P+SS+GA+VLAKRVAQQLE MP VTATMTKSLR GKVFLDWSQN+G+KTTIAPYSLRG Sbjct: 183 PISSQGASVLAKRVAQQLEKAMPKQVTATMTKSLREGKVFLDWSQNNGNKTTIAPYSLRG 242 Query: 256 REQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXKYRSMRN 315 RE PTVAAPR+WEE++DP LR L +DEVL R+ KYRSMR+ Sbjct: 243 REHPTVAAPRTWEEIEDPDLRHLRFDEVLERIEEFGDLLADLDEYVPVEDRLTKYRSMRD 302 Query: 316 ASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNH 375 S+TPEPVP P G + FVIQEHHARRLHYD RLERDGVLVSWAVPKNLP+ S NH Sbjct: 303 PSRTPEPVPPLPPKAGNNDRFVIQEHHARRLHYDLRLERDGVLVSWAVPKNLPDRPSENH 362 Query: 376 LAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKG-EVIVNL 434 LAVHTEDHP+EY TF G IPKGEYG G +I+WD+GTY+TEKF D + +G KG EVI+ L Sbjct: 363 LAVHTEDHPMEYLTFHGTIPKGEYGGGDMIVWDTGTYETEKFNDHAPDGPAKGGEVIITL 422 Query: 435 HGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVAGLESGQWAFEGKWD 494 HG+RI GRYALIQT+G WLAHRMKDQ F+ APML +HGSV + QWAFEGKWD Sbjct: 423 HGNRIDGRYALIQTDGKNWLAHRMKDQGNPTFEDFAPMLATHGSVEKFTAKQWAFEGKWD 482 Query: 495 GYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFN 554 GYRLLV+ADHG L L+SRSGRDVTAEYPQLR+LAADLADHHVVLDGE+VALD GVPSF Sbjct: 483 GYRLLVDADHGKLCLKSRSGRDVTAEYPQLRALAADLADHHVVLDGEVVALDDKGVPSFG 542 Query: 555 EMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPELLPGDGAEA 614 MQNR R+TR+EFWAFD+L LDG ETL S G LIV LL GDG EA Sbjct: 543 HMQNRARSTRVEFWAFDILRLDGRWLLKAKYRDRRKLLETLASGGGLIVQPLLDGDGLEA 602 Query: 615 LAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSL 674 L + KR WEGV+AK+ DS YQPGRRSSAWIKDK WNTQEVVIGGWR G GGRSSGIG+L Sbjct: 603 LEDARKRRWEGVVAKKWDSTYQPGRRSSAWIKDKLWNTQEVVIGGWREGNGGRSSGIGAL 662 Query: 675 LMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPT 734 ++GIPGP GL F GRVGTGFTE++L +LKKTLAPLHT ESPF LP ++AKGVTFV P Sbjct: 663 VLGIPGPDGLQFVGRVGTGFTEKELGSLKKTLAPLHTYESPFATRLPTQDAKGVTFVRPE 722 Query: 735 LVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 LVGEVRYSE T D RLRQ SWRGLRPDK P +VV E Sbjct: 723 LVGEVRYSERTGDGRLRQPSWRGLRPDKTPDDVVWE 758 >tr|A1ULC1|A1ULC1_MYCSK Tax_Id=189918 SubName: Full=ATP dependent DNA ligase;[Mycobacterium sp.] Length = 758 Score = 1080 bits (2792), Expect = 0.0 Identities = 535/756 (70%), Positives = 595/756 (78%), Gaps = 5/756 (0%) Query: 16 QVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFFEKQ 75 +V LTN DKVLYPATGTTK++VF YY +AE M+PHIAGR TRKRWPNGV + FFEKQ Sbjct: 7 RVRLTNPDKVLYPATGTTKAEVFEYYVDVAEAMVPHIAGRAVTRKRWPNGVGELEFFEKQ 66 Query: 76 LASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSKGEI 135 LASSAPDWL R ++VH+SGTTTYPIID+ GLAWIAQQAALEVHVPQWRFV G Sbjct: 67 LASSAPDWLARGTIVHKSGTTTYPIIDTREGLAWIAQQAALEVHVPQWRFVGS----GGD 122 Query: 136 LTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTPLDE 195 LTPGPATR+VFDLDPGEGVT QL +VA VRDL+ DIGL+ PLTSGSKGLHLY PL E Sbjct: 123 LTPGPATRIVFDLDPGEGVTFRQLCEVAHEVRDLITDIGLTAYPLTSGSKGLHLYVPLKE 182 Query: 196 PVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYSLRG 255 P+SS+GA+VLAKRVAQQLE MP VTATMTKSLR GKVFLDWSQN+G+KTTIAPYSLRG Sbjct: 183 PISSQGASVLAKRVAQQLEKAMPKQVTATMTKSLREGKVFLDWSQNNGNKTTIAPYSLRG 242 Query: 256 REQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXKYRSMRN 315 RE PTVAAPR+WEE++DP LR L +DEVL R+ KYRSMR+ Sbjct: 243 REHPTVAAPRTWEEIEDPDLRHLRFDEVLERIEEFGDLLADLDEYVPVEDRLTKYRSMRD 302 Query: 316 ASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNH 375 S+TPEPVP P G + FVIQEHHARRLHYD RLERDGVLVSWAVPKNLP+ S NH Sbjct: 303 PSRTPEPVPPLPPKAGNNDRFVIQEHHARRLHYDLRLERDGVLVSWAVPKNLPDRPSENH 362 Query: 376 LAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKG-EVIVNL 434 LAVHTEDHP+EY TF G IPKGEYG G +I+WD+GTY+TEKF D + +G KG EVI+ L Sbjct: 363 LAVHTEDHPMEYLTFHGTIPKGEYGGGDMIVWDTGTYETEKFNDHAPDGPAKGGEVIITL 422 Query: 435 HGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVAGLESGQWAFEGKWD 494 HG+RI GRYALIQT+G WLAHRMKDQ F+ APML +HGSV + QWAFEGKWD Sbjct: 423 HGNRIDGRYALIQTDGKNWLAHRMKDQGNPTFEDFAPMLATHGSVEKFTAKQWAFEGKWD 482 Query: 495 GYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFN 554 GYRLLV+ADHG L L+SRSGRDVTAEYPQLR+LAADLADHHVVLDGE+VALD GVPSF Sbjct: 483 GYRLLVDADHGKLCLKSRSGRDVTAEYPQLRALAADLADHHVVLDGEVVALDDKGVPSFG 542 Query: 555 EMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPELLPGDGAEA 614 MQNR R+TR+EFWAFD+L LDG ETL S G LIV LL GDG EA Sbjct: 543 HMQNRARSTRVEFWAFDILRLDGRWLLKAKYRDRRKLLETLASGGGLIVQPLLDGDGLEA 602 Query: 615 LAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSL 674 L + KR WEGV+AK+ DS YQPGRRSSAWIKDK WNTQEVVIGGWR G GGRSSGIG+L Sbjct: 603 LEDARKRRWEGVVAKKWDSTYQPGRRSSAWIKDKLWNTQEVVIGGWREGNGGRSSGIGAL 662 Query: 675 LMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPT 734 ++GIPGP GL F GRVGTGFTE++L +LKKTLAPLHT ESPF LP ++AKGVTFV P Sbjct: 663 VLGIPGPDGLQFVGRVGTGFTEKELGSLKKTLAPLHTYESPFATRLPTQDAKGVTFVRPE 722 Query: 735 LVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 LVGEVRYSE T D RLRQ SWRGLRPDK P +VV E Sbjct: 723 LVGEVRYSERTGDGRLRQPSWRGLRPDKTPDDVVWE 758 >tr|A3Q5S0|A3Q5S0_MYCSJ Tax_Id=164757 SubName: Full=ATP dependent DNA ligase;[Mycobacterium sp.] Length = 758 Score = 1079 bits (2790), Expect = 0.0 Identities = 534/756 (70%), Positives = 594/756 (78%), Gaps = 5/756 (0%) Query: 16 QVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFFEKQ 75 +V LTN DKVLYPATGTTK++VF YY +AE M+PHIAGR TRKRWPNGV + FFEKQ Sbjct: 7 RVRLTNPDKVLYPATGTTKAEVFEYYVDVAEAMVPHIAGRAVTRKRWPNGVGELEFFEKQ 66 Query: 76 LASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSKGEI 135 LASSAPDWL R ++VH+SGTTTYPIID+ GLAWIAQQAALEVHVPQWRFV G Sbjct: 67 LASSAPDWLARGTIVHKSGTTTYPIIDTREGLAWIAQQAALEVHVPQWRFVGS----GGD 122 Query: 136 LTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTPLDE 195 LTPGPATR+VFDLDPGEGVT QL +VA VRDL+ IGL+ PLTSGSKGLHLY PL E Sbjct: 123 LTPGPATRIVFDLDPGEGVTFRQLCEVAHEVRDLITGIGLTAYPLTSGSKGLHLYVPLQE 182 Query: 196 PVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYSLRG 255 P+SS+GA+VLAKRVAQQLE MP VTATMTKSLR GKVFLDWSQN+G+KTTIAPYSLRG Sbjct: 183 PISSQGASVLAKRVAQQLEKAMPKQVTATMTKSLREGKVFLDWSQNNGNKTTIAPYSLRG 242 Query: 256 REQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXKYRSMRN 315 RE PTVAAPR+WEE++DP LR L +DEVL R+ KYRSMR+ Sbjct: 243 REHPTVAAPRTWEEIEDPDLRHLRFDEVLERIEEFGDLLADLDEYVPVEDRLTKYRSMRD 302 Query: 316 ASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNH 375 S+TPEPVP P G + FVIQEHHARRLHYD RLERDGVLVSWAVPKNLP+ S NH Sbjct: 303 PSRTPEPVPPRPPKAGNNDRFVIQEHHARRLHYDLRLERDGVLVSWAVPKNLPDRPSENH 362 Query: 376 LAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKG-EVIVNL 434 LAVHTEDHP+EY TF G IPKGEYG G +I+WD+GTY+TEKF D + +G KG EVI+ L Sbjct: 363 LAVHTEDHPMEYLTFHGTIPKGEYGGGDMIVWDTGTYETEKFNDHAPDGPAKGGEVIITL 422 Query: 435 HGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVAGLESGQWAFEGKWD 494 HG+RI GRYALIQT+G WLAHRMKDQ F+ APML +HGSV L + QWAFEGKWD Sbjct: 423 HGNRIDGRYALIQTDGKNWLAHRMKDQGTPTFEDFAPMLATHGSVEKLTAKQWAFEGKWD 482 Query: 495 GYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFN 554 GYRLLV+ADHG L L+SRSGRDVT+EYPQLR+LAADLADHHVVLDGE+VALD GVPSF Sbjct: 483 GYRLLVDADHGKLCLKSRSGRDVTSEYPQLRALAADLADHHVVLDGEVVALDDKGVPSFG 542 Query: 555 EMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPELLPGDGAEA 614 MQNR R+TR+EFWAFD+L LDG ETL S G LIV LL GDG EA Sbjct: 543 HMQNRARSTRVEFWAFDILRLDGRWLLKAKYRDRRKLLETLASGGGLIVQPLLDGDGLEA 602 Query: 615 LAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSL 674 L + KR WEGV+AK+ DS YQPGRRSSAWIKDK WNTQEVVIGGWR G GGRSSGIG+L Sbjct: 603 LEDARKRRWEGVVAKKWDSTYQPGRRSSAWIKDKLWNTQEVVIGGWREGNGGRSSGIGAL 662 Query: 675 LMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPT 734 ++GIPGP GL F GRVGTGFTE+ L +LKKTLAPLHTDESPF LP ++A GVTFV P Sbjct: 663 VLGIPGPDGLQFVGRVGTGFTEKQLGSLKKTLAPLHTDESPFATRLPTQDATGVTFVRPE 722 Query: 735 LVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 LVGEVRYSE T D RLRQ SWRGLRPDK P +VV E Sbjct: 723 LVGEVRYSERTGDGRLRQPSWRGLRPDKTPDDVVWE 758 >tr|A1TET8|A1TET8_MYCVP Tax_Id=350058 SubName: Full=ATP dependent DNA ligase;[Mycobacterium vanbaalenii] Length = 763 Score = 1077 bits (2785), Expect = 0.0 Identities = 539/765 (70%), Positives = 603/765 (78%), Gaps = 18/765 (2%) Query: 16 QVTLTNADKVLYPATG-----TTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQAS 70 +V LTN DKVLYPATG TK++VF YY +A M+PHIAGR TRKRWPNGV + S Sbjct: 7 RVKLTNPDKVLYPATGDRRRAVTKAEVFDYYVNVAAAMLPHIAGRAVTRKRWPNGVTEES 66 Query: 71 FFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWT 130 FFEKQLASSAPDWL R ++VH+SGTTTYP+ID+ GLAWIAQQAALEVHVPQWRFV Sbjct: 67 FFEKQLASSAPDWLGRGTIVHKSGTTTYPVIDTVEGLAWIAQQAALEVHVPQWRFV---- 122 Query: 131 SKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLY 190 G + GPATR+VFDLDPGEGVT QL +VA VRDLLADIGL T PLTSGSKGLHLY Sbjct: 123 -DGSV---GPATRIVFDLDPGEGVTFRQLCEVANEVRDLLADIGLRTFPLTSGSKGLHLY 178 Query: 191 TPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAP 250 PLDEP+SS+GA+VLAKRVAQQLE MP VTATMTKSLR GKVF+DWSQN+ +KTTIAP Sbjct: 179 VPLDEPISSRGASVLAKRVAQQLEQAMPMQVTATMTKSLRTGKVFVDWSQNNANKTTIAP 238 Query: 251 YSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXKY 310 YSLRGRE PTVAAPR+WEE+ DP LRQLT+DEVL RL +Y Sbjct: 239 YSLRGREHPTVAAPRTWEEISDPDLRQLTFDEVLDRLDRDGDLLAGLDPPVPVPDRLTRY 298 Query: 311 RSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPET 370 RSMR+ +KTPEP+P P G + FVIQEHHARRLHYDFRLERDGVLVSWAVPKNLP+T Sbjct: 299 RSMRDTAKTPEPIPGDAPTTGNNDKFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPDT 358 Query: 371 TSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKG-E 429 SVNHLAVHTEDHP+EY TF G IP+GEYG G+V IWD+GTY+TEKFRD+ +G ++G E Sbjct: 359 PSVNHLAVHTEDHPMEYLTFAGEIPRGEYGGGEVYIWDTGTYETEKFRDNPPDGPDRGGE 418 Query: 430 VIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVAGLESGQWAF 489 VIV LHG +I GRYALIQT+G WLAHRMKDQ LAPMLT+HGSV L GQWAF Sbjct: 419 VIVTLHGEKIDGRYALIQTDGKNWLAHRMKDQQRPTAADLAPMLTTHGSVQRLTKGQWAF 478 Query: 490 EGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSG 549 EGKWDGYRLLVEADHG L LRSR+GRDVTAEYPQL++LAADLADHHV+LDGE VALD SG Sbjct: 479 EGKWDGYRLLVEADHGRLALRSRNGRDVTAEYPQLQALAADLADHHVILDGEAVALDESG 538 Query: 550 VPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPELLPG 609 VPSF EMQNR R+TR+EFWAFD+LFLDG E L G LIVP L+ Sbjct: 539 VPSFREMQNRARSTRVEFWAFDILFLDGRSLLRAKYTDRRRVLEALADGGGLIVPPLIGA 598 Query: 610 D-GAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRS 668 D GAEAL + KRGWEGV+AK+RDS YQPGRRSS+WIKDK WNTQEVVIGGWR GEGGR+ Sbjct: 599 DTGAEALETARKRGWEGVVAKKRDSTYQPGRRSSSWIKDKLWNTQEVVIGGWRQGEGGRT 658 Query: 669 SGIGSLLMGIPG---PSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREA 725 SGIG+L++GIP GL F GRVGTGFTE++LA+LK+TLAPLHTDESPF LP ++A Sbjct: 659 SGIGALMLGIPAGGVAGGLQFVGRVGTGFTEKELASLKETLAPLHTDESPFATELPKQDA 718 Query: 726 KGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 KGVTFV P LVGEVRYSE T D+RLRQ SWRGLR DK P EVV E Sbjct: 719 KGVTFVRPELVGEVRYSERTSDNRLRQPSWRGLRTDKTPDEVVWE 763 >tr|A4T6Z6|A4T6Z6_MYCGI Tax_Id=350054 SubName: Full=ATP dependent DNA ligase;[Mycobacterium gilvum] Length = 766 Score = 1071 bits (2770), Expect = 0.0 Identities = 529/756 (69%), Positives = 597/756 (78%), Gaps = 4/756 (0%) Query: 16 QVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFFEKQ 75 +V LTN DKVLYPA+GTTK+ VF YY +AE M+PHIAGR TRKRWPNGV+++SFFEKQ Sbjct: 7 RVKLTNPDKVLYPASGTTKAQVFEYYVNVAEGMLPHIAGRAVTRKRWPNGVEESSFFEKQ 66 Query: 76 LASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTS---K 132 LASSAPDWL R ++ H+SGTTTYP+ID+ GLAWIAQQAALEVHVPQWRF S Sbjct: 67 LASSAPDWLDRGTIAHKSGTTTYPVIDTVEGLAWIAQQAALEVHVPQWRFTRGGQSGAAD 126 Query: 133 GEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTP 192 G PGPATR+VFDLDPGEGVT QL +VA VR+L+ DIGL+T PLTSGSKGLHLY P Sbjct: 127 GGDGKPGPATRIVFDLDPGEGVTFRQLCEVAHEVRELITDIGLTTFPLTSGSKGLHLYVP 186 Query: 193 LDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYS 252 L++P+SS+GA+VLAKRVAQQLE MP VTATMTKSLR GKVFLDWSQN+G+KTTIAPYS Sbjct: 187 LEDPISSRGASVLAKRVAQQLEQSMPKRVTATMTKSLRDGKVFLDWSQNNGNKTTIAPYS 246 Query: 253 LRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXKYRS 312 LRGRE+PTVAAPR+W+E++DP LR LT+DEVL RL +YRS Sbjct: 247 LRGRERPTVAAPRTWDEIEDPDLRHLTFDEVLDRLERDGDLLADLDPPLPATDKLTRYRS 306 Query: 313 MRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTS 372 MR+ +KTPEPVP P G + FVIQEHHARRLHYDFRLERDGVLVSWAVPKNLP+T S Sbjct: 307 MRDRTKTPEPVPAEPPETGANDKFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPDTPS 366 Query: 373 VNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKG-EVI 431 VNHLAVHTEDHP++Y F G IPKGEYG G+V IWD+GTY+TEKFRD+ +G KG EVI Sbjct: 367 VNHLAVHTEDHPMDYIDFAGEIPKGEYGGGEVHIWDTGTYETEKFRDNPPDGPAKGGEVI 426 Query: 432 VNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVAGLESGQWAFEG 491 V LHG +I GRYALIQT+G WLAHRMKDQ LAPMLT+ GSV L GQWAFEG Sbjct: 427 VTLHGQKIEGRYALIQTDGKNWLAHRMKDQQKPTAADLAPMLTTEGSVERLTRGQWAFEG 486 Query: 492 KWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVP 551 KWDGYRLLV+ADHG L LRSR GRDVTAEYPQL++LAADLADHHV+LDGE VALD GVP Sbjct: 487 KWDGYRLLVDADHGKLTLRSRRGRDVTAEYPQLKALAADLADHHVILDGEAVALDEDGVP 546 Query: 552 SFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPELLPGDG 611 SF EMQNR R+TR+EFWAFD+LFLDG E L G LIVP L GDG Sbjct: 547 SFGEMQNRARSTRVEFWAFDILFLDGRLLTKATYTDRRKLLEALAEGGGLIVPPALEGDG 606 Query: 612 AEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGI 671 EAL Y+ + WEGVIAK+RDS YQPGRRSSAWIKDK WNTQEVVIGGWR GEGGR+SGI Sbjct: 607 PEALEYARSQRWEGVIAKKRDSTYQPGRRSSAWIKDKIWNTQEVVIGGWRQGEGGRTSGI 666 Query: 672 GSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFV 731 G+L++G+P GLHF GRVGTGFT++ LA+LKKTL PL TDESPF A LP ++AKGVTFV Sbjct: 667 GALVLGVPDDDGLHFVGRVGTGFTDKQLASLKKTLEPLRTDESPFAAELPKQDAKGVTFV 726 Query: 732 APTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEV 767 P LVGEVRYSE T D RLRQ+SWRGLR DK P +V Sbjct: 727 RPELVGEVRYSERTSDGRLRQASWRGLRDDKVPEDV 762 >tr|A0R3R7|A0R3R7_MYCS2 Tax_Id=246196 SubName: Full=DNA ligase;[Mycobacterium smegmatis] Length = 755 Score = 1037 bits (2681), Expect = 0.0 Identities = 512/763 (67%), Positives = 592/763 (77%), Gaps = 21/763 (2%) Query: 16 QVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFFEKQ 75 +V LTN DKVLYPATGTTK++VF YY IA+VM+PHIAGRP TRKRWPNGV + +FFEKQ Sbjct: 6 RVRLTNPDKVLYPATGTTKAEVFDYYLSIAQVMVPHIAGRPVTRKRWPNGVAEEAFFEKQ 65 Query: 76 LASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSKGEI 135 LASSAP WL R S+ H+SGTTTYPII++ GLAW+AQQA+LEVHVPQWRF E Sbjct: 66 LASSAPSWLERGSITHKSGTTTYPIINTREGLAWVAQQASLEVHVPQWRF--------ED 117 Query: 136 LTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTPLDE 195 GPATR+VFDLDPGEGVTM QL ++A VR L+ D+ L T PLTSGSKGLHLY PL E Sbjct: 118 GDQGPATRIVFDLDPGEGVTMTQLCEIAHEVRALMTDLDLETYPLTSGSKGLHLYVPLAE 177 Query: 196 PVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYSLRG 255 P+SS+GA+VLA+RVAQQLE MP LVTATMTKSLRAGKVFLDWSQN+ +KTTIAPYSLRG Sbjct: 178 PISSRGASVLARRVAQQLEQAMPKLVTATMTKSLRAGKVFLDWSQNNAAKTTIAPYSLRG 237 Query: 256 REQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXKYRSMRN 315 R+ PTVAAPR+W+E+ DP LR L +DEVL RL YRSMR+ Sbjct: 238 RDHPTVAAPRTWDEIADPELRHLRFDEVLDRLDEYGDLLAPLDADAPIADKLTTYRSMRD 297 Query: 316 ASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNH 375 ASKTPEPVP+ P G + FVIQEHHARRLHYD RLERDGVLVS+AVPKNLPETT+ N Sbjct: 298 ASKTPEPVPKEIPKTGNNDKFVIQEHHARRLHYDLRLERDGVLVSFAVPKNLPETTAENR 357 Query: 376 LAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFR--------DDSRNGSEK 427 LAVHTEDHP+EY F G+IPKGEYGAG ++IWDSG+Y+TEKFR DDS Sbjct: 358 LAVHTEDHPIEYLAFHGSIPKGEYGAGDMVIWDSGSYETEKFRVPEELDNPDDSH----- 412 Query: 428 GEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVAGLESGQW 487 GE+IV LHG ++ GRYALIQT G WLAHRMKDQ + APML + GSVA ++ QW Sbjct: 413 GEIIVTLHGEKVDGRYALIQTKGKNWLAHRMKDQKNARPEDFAPMLATEGSVAKYKAKQW 472 Query: 488 AFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDS 547 AFEGKWDGYR++++ADHG L++RSR+GR+VT EYPQ ++LAADLA+HHVVLDGE VALD Sbjct: 473 AFEGKWDGYRVIIDADHGQLQIRSRTGREVTGEYPQFKALAADLAEHHVVLDGEAVALDE 532 Query: 548 SGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPELL 607 SGVPSF +MQNR R+TR+EFWAFD+L+LDG E L G LIVP+ L Sbjct: 533 SGVPSFGQMQNRARSTRVEFWAFDILWLDGRSLLRAKYSDRRKILEALADGGGLIVPDQL 592 Query: 608 PGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGR 667 PGDG EA+ + K+ +EGV+AK+ DS YQPGRRSS+WIKDK WNTQEVVIGGWR GEGGR Sbjct: 593 PGDGPEAMEHVRKKRFEGVVAKKWDSTYQPGRRSSSWIKDKIWNTQEVVIGGWRQGEGGR 652 Query: 668 SSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKG 727 SSGIG+L++GIPGP GL F GRVGTGFTE++L+ LK L PLHTDESPF+A LP +A+G Sbjct: 653 SSGIGALVLGIPGPEGLQFVGRVGTGFTEKELSKLKDMLKPLHTDESPFNAPLPKVDARG 712 Query: 728 VTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 VTFV P LVGEVRYSE T D RLRQ SWRGLRPDK P EVV E Sbjct: 713 VTFVRPELVGEVRYSERTSDGRLRQPSWRGLRPDKTPDEVVWE 755 >tr|B1MJG7|B1MJG7_MYCA9 Tax_Id=561007 SubName: Full=Putative ATP-dependent DNA ligase;[Mycobacterium abscessus] Length = 750 Score = 978 bits (2527), Expect = 0.0 Identities = 501/754 (66%), Positives = 566/754 (75%), Gaps = 20/754 (2%) Query: 25 VLYPAT----GTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFFEKQLASSA 80 +LYPAT TTK+DVFGYYT IA M+PHIAGRP TRKRWPNG+DQ SFFEK LASSA Sbjct: 1 MLYPATDTSPATTKADVFGYYTAIAPFMLPHIAGRPVTRKRWPNGIDQPSFFEKDLASSA 60 Query: 81 PDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSKGEILTPGP 140 PDWLPR + H+S +YP+ID++ LAWIAQQAALEVHVPQWRF E PGP Sbjct: 61 PDWLPRRRIEHKSRYVSYPLIDTSVALAWIAQQAALEVHVPQWRFAGE--------NPGP 112 Query: 141 ATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTPLDEPVSSK 200 ATRLVFDLDPGEGV MAQLA+VARA+RD+LADIGL+T P+TSGSKGLHLY PL +P SS Sbjct: 113 ATRLVFDLDPGEGVGMAQLAEVARAIRDVLADIGLTTFPVTSGSKGLHLYVPLAQPASSS 172 Query: 201 GATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYSLRGREQPT 260 GA +AK+VA QLE VMP LVTATMT+ LRAGKVF+DWSQNSGSKTT+APYSLRGR PT Sbjct: 173 GAVAVAKKVAVQLEQVMPDLVTATMTRQLRAGKVFVDWSQNSGSKTTVAPYSLRGRAVPT 232 Query: 261 VAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXKYRSMRNASKTP 320 VAAPR+WEELDDPGLRQL YDEVL R YRSMR+ ++TP Sbjct: 233 VAAPRTWEELDDPGLRQLRYDEVLTRAQRDGDLLAGLDDVEIAEDRLSTYRSMRDPTRTP 292 Query: 321 EPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHT 380 EPVP +P GQ N+FVIQEHHA LHYDFRLERDGVLVSWAVPKNLP SVNHLAVHT Sbjct: 293 EPVPAVKPEAGQDNSFVIQEHHATALHYDFRLERDGVLVSWAVPKNLPLEPSVNHLAVHT 352 Query: 381 EDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKF---RDDS-RNGSEKGEVIVNLHG 436 EDHPLEY +FEG IPKGEYGAG+V IWDSGTYDTEKF RDDS +G +KGEVIV LHG Sbjct: 353 EDHPLEYGSFEGTIPKGEYGAGEVTIWDSGTYDTEKFIDPRDDSGADGGQKGEVIVTLHG 412 Query: 437 SRISGRYALIQTNGDQWLAHRMKDQTAFDFDT--LAPMLTSHGSVAGLESGQWAFEGKWD 494 RI+GRYALI+TNG QWL HRMKDQ LAPML + GSVAGL + +WAFEGKWD Sbjct: 413 KRITGRYALIRTNGKQWLVHRMKDQRPAGSMPVGLAPMLPTTGSVAGLTAEEWAFEGKWD 472 Query: 495 GYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFN 554 GYRL++E D G LR +RSGRDVTAE+P L+ LA +L+DH VVLDGE+V D G+PSF Sbjct: 473 GYRLILECDRGQLRALARSGRDVTAEFPALQRLAHELSDHRVVLDGEVVVPDRKGLPSFA 532 Query: 555 EMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETL-GSAGNLIVPELLPGDGAE 613 +QNR I FWAFDLL+LDG E L ++ VP+ L GDGA Sbjct: 533 LLQNRTPGADIRFWAFDLLYLDGKSLLRTKYRDRRRLLEVLVTGTESMTVPQQLSGDGAA 592 Query: 614 ALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGS 673 ALAYS +GWEGV+AKR DS Y PGR S WIK K+W++QEVVIGGWR G+GGRSSGIGS Sbjct: 593 ALAYSQDQGWEGVVAKRLDSTYVPGRTQS-WIKAKNWSSQEVVIGGWRKGQGGRSSGIGS 651 Query: 674 LLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAP 733 LLMGIP GL +AGRVGTGFTER+L++LK+ L PLH ESPFDA L EAK V FV P Sbjct: 652 LLMGIPVEGGLRYAGRVGTGFTERELSSLKERLEPLHRAESPFDAPLSTVEAKDVQFVEP 711 Query: 734 TLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEV 767 LV EVRY + TP L+ SSWRGLR DK+ +V Sbjct: 712 VLVAEVRYGDRTPGGILKHSSWRGLRTDKSVRDV 745 >tr|C3JDN2|C3JDN2_RHOER Tax_Id=596309 SubName: Full=ATP dependent DNA ligase C region family protein;[Rhodococcus erythropolis SK121] Length = 760 Score = 853 bits (2204), Expect = 0.0 Identities = 435/766 (56%), Positives = 523/766 (68%), Gaps = 28/766 (3%) Query: 13 NGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFF 72 +G V++TN K+LYP +GTTK++V YYT IA VM+PH+ GRP TRKRWPNGVD SFF Sbjct: 12 DGTTVSVTNLGKILYPESGTTKAEVIDYYTRIAAVMLPHVVGRPGTRKRWPNGVDGQSFF 71 Query: 73 EKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSK 132 EK LASSAP WL RAS+ H TYP+ DS LAW+ QQAALE+HVPQWRF Sbjct: 72 EKNLASSAPQWLTRASLQHSDRVVTYPVFDSVASLAWLGQQAALELHVPQWRFDGS---- 127 Query: 133 GEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTP 192 GPATRLVFDLDPGEGV + + A+VAR++RDL+A +G + P+TSGSKG+HLY P Sbjct: 128 ----ERGPATRLVFDLDPGEGVGLTECAEVARSIRDLVATLGWTAYPVTSGSKGIHLYVP 183 Query: 193 LDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYS 252 LD + GA+ +AK++A LE + P LVTATM +++RAGK+F+DWSQN+ +KTTIAPYS Sbjct: 184 LDRALDGSGASTVAKQIATGLEKLHPDLVTATMARNVRAGKIFVDWSQNNAAKTTIAPYS 243 Query: 253 LRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXX--KY 310 +RGR+QP VAAPRSW+ELDDP LR L +DEVL R+ Y Sbjct: 244 MRGRDQPYVAAPRSWDELDDPKLRHLLFDEVLERVESDGDLLGDLDPPVSAAVADTLTHY 303 Query: 311 RSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPET 370 R+ R+A +TPEP+P A GNTFVIQEHHARRLHYD RLERDGVLVSWAVPK +P + Sbjct: 304 RNKRSADRTPEPIPAAVTKETAGNTFVIQEHHARRLHYDVRLERDGVLVSWAVPKGVPTS 363 Query: 371 TSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGEV 430 N LAVHTEDHPLEYATF G IPKGEYG G + IWDSGTY+TEK+R+D EV Sbjct: 364 AGENRLAVHTEDHPLEYATFSGTIPKGEYGGGSMTIWDSGTYETEKWRED--------EV 415 Query: 431 IVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDT-----LAPMLTSHGSVAGLESG 485 IV L G R+ GR+ALI+T GDQWL H MKDQ A F T L PML + G++ GL+S Sbjct: 416 IVRLSGKRVQGRFALIRTKGDQWLMHLMKDQNA-SFGTEFPKNLEPMLATAGTLEGLDSQ 474 Query: 486 QWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVAL 545 +WAFEGKWDG R+++E G + LRSR+G D T +YP L LA L H VVLDGE+VA Sbjct: 475 EWAFEGKWDGIRVILEYHSGTMSLRSRAGNDKTGDYPSLAGLAEVLDGHDVVLDGEVVAY 534 Query: 546 DSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETL-GSAGNLIVP 604 + +GV F +Q R F AFDLL+LDG L G G L VP Sbjct: 535 NDAGVTDFGLLQ---RGGEPVFLAFDLLYLDGVSLLRKSYSDRRTVLNALAGKVGELEVP 591 Query: 605 ELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGE 664 + G AL S GWEG++AKRR S Y PGRR S+WIK K+W TQEVVIGGWR G+ Sbjct: 592 PQIEGTAENALEVSTDAGWEGIVAKRRASVYLPGRRGSSWIKVKNWRTQEVVIGGWRTGQ 651 Query: 665 GGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPARE 724 G R+ GIG+LLMGIPG GL + GRVGTGF++RDL +L TL PL ESPF LPA + Sbjct: 652 GNRAQGIGALLMGIPGEDGLTYVGRVGTGFSDRDLESLLATLEPLRQKESPFGEELPADD 711 Query: 725 AKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 KG +V P LVGEVR+ +WT +RLR SWRGLR DK P +VVRE Sbjct: 712 RKGAVWVRPELVGEVRFMDWTKTERLRHPSWRGLREDKKPGDVVRE 757 >tr|C1ATU5|C1ATU5_RHOOB Tax_Id=632772 (ligD)SubName: Full=ATP-dependent DNA ligase LigD; EC=6.5.1.1;[Rhodococcus opacus] Length = 758 Score = 843 bits (2178), Expect = 0.0 Identities = 429/763 (56%), Positives = 523/763 (68%), Gaps = 29/763 (3%) Query: 13 NGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFF 72 +G +++LTN KVLYP +GT K +V YY+ IA M+PH+ RPATRKRWPNGVD FF Sbjct: 12 DGHRLSLTNLGKVLYPESGTVKGEVIDYYSRIAPAMLPHVVDRPATRKRWPNGVDSEPFF 71 Query: 73 EKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSK 132 EK LA+SAP WL R ++ H + YP+++S L W QQAALE+HVPQWRF Sbjct: 72 EKNLAASAPGWLERRALEHSDRSVHYPLLNSVAALVWAGQQAALELHVPQWRFDGSHR-- 129 Query: 133 GEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTP 192 GPATR+VFDLDPG GV + + A+VARAVRDL+A++G + P+TSGSKG+HLY P Sbjct: 130 ------GPATRIVFDLDPGPGVGLVECAEVARAVRDLVANLGWTAYPVTSGSKGIHLYVP 183 Query: 193 LDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYS 252 LD + GA+ +AK+VA LE + P LVTATM KS+RAGKVF+DWSQN+ SKTTIAPYS Sbjct: 184 LDRKLDGSGASTVAKQVATGLEKLRPELVTATMAKSVRAGKVFVDWSQNNPSKTTIAPYS 243 Query: 253 LRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXKYRS 312 LRGR +P VAAPRSW+ELDDPGLRQL ++EVL R +YR Sbjct: 244 LRGRSEPYVAAPRSWDELDDPGLRQLRFEEVLERWESDGDLLAGLDPPIEDDTALAEYRR 303 Query: 313 MRNASKTPEPVPRA-RPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETT 371 R+ +TPEP+P +P G GN+FVIQEHHARRLHYD RLERDGVLVSWAVPKN+P TT Sbjct: 304 KRDPGRTPEPMPHTVQP--GAGNSFVIQEHHARRLHYDLRLERDGVLVSWAVPKNVPTTT 361 Query: 372 SVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGEVI 431 N LAVHTEDHPLEY TF G+IPKGEYG G++ IWD+GTYDTEK+RDD EVI Sbjct: 362 GENRLAVHTEDHPLEYLTFSGSIPKGEYGGGQMTIWDTGTYDTEKWRDD--------EVI 413 Query: 432 VNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDT------LAPMLTSHGSVAGLESG 485 V LHG ++ GR+ALI+T GDQWL H MKDQ+ + L+PML S G++ GL + Sbjct: 414 VQLHGEQVEGRFALIRTKGDQWLMHLMKDQSPGGSRSSELPRGLSPMLASPGTLDGLGAD 473 Query: 486 QWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVAL 545 +WAFEGKWDG R++ E G L++ SR+G D T +Y QL LA L DH VVLDGE+VA Sbjct: 474 EWAFEGKWDGIRVIAEISGGELKMTSRAGNDKTRDYAQLGWLADSLEDHEVVLDGEVVAF 533 Query: 546 DSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGS-AGNLIVP 604 D GV +F +Q + F AFD+L+LDG E L + +L+VP Sbjct: 534 DERGVANFGLLQ---QGNEPHFLAFDVLYLDGVSLLRKKYTDRRRVLEALAAKVDDLVVP 590 Query: 605 ELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGE 664 L G EAL S ++GWEGV+AKRR+S Y PG+R S+WIK K+W TQE VIGGWR G+ Sbjct: 591 PQLHGSAQEALDESRRKGWEGVVAKRRESVYLPGKRGSSWIKVKNWRTQEAVIGGWRRGQ 650 Query: 665 GGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPARE 724 GGRSSGIGS+L+G+P GL + GRVGTGFTERDL L TL PL TD SPF LP + Sbjct: 651 GGRSSGIGSVLLGVPEDEGLRYIGRVGTGFTERDLQELAATLGPLETDTSPFVEDLPTAD 710 Query: 725 AKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEV 767 KG +V PTLV EVR+ +WT RLR SWRGLR DK P +V Sbjct: 711 RKGAVWVTPTLVAEVRFMDWTGSRRLRHPSWRGLRNDKAPEDV 753 >tr|C0ZMH2|C0ZMH2_RHOE4 Tax_Id=234621 (ligD)SubName: Full=ATP-dependent DNA ligase LigD; EC=6.5.1.1;[Rhodococcus erythropolis] Length = 758 Score = 843 bits (2177), Expect = 0.0 Identities = 431/763 (56%), Positives = 518/763 (67%), Gaps = 28/763 (3%) Query: 13 NGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFF 72 +G V++TN K+ YP +GTTK++V YYT IA VM+PH+ GRP TRKRWPNGVD SFF Sbjct: 12 DGTTVSVTNLGKIFYPESGTTKAEVIDYYTRIAAVMLPHVVGRPGTRKRWPNGVDGQSFF 71 Query: 73 EKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSK 132 EK LASSAP WL RAS+ H TYPI DS LAW+ QQAALE+HVPQWRF Sbjct: 72 EKNLASSAPQWLTRASLQHSDRVVTYPIFDSVASLAWLGQQAALELHVPQWRFDGS---- 127 Query: 133 GEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTP 192 GPATRLVFDLDPGEGV +A+ A+VAR++RDL+A +G + P+TSGSKG+HLY P Sbjct: 128 ----ERGPATRLVFDLDPGEGVGLAECAEVARSIRDLVATLGWTAYPVTSGSKGIHLYVP 183 Query: 193 LDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYS 252 LD + GA+ +AK++A LE + P LVTATM +++RAGK+F+DWSQN+ +KTTIAPYS Sbjct: 184 LDRALDGSGASTVAKQIATGLEKLHPDLVTATMARNVRAGKIFVDWSQNNAAKTTIAPYS 243 Query: 253 LRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXX--KY 310 +RGR+QP VAAPRSW+ELDDP LR L +DEVL R+ Y Sbjct: 244 MRGRDQPYVAAPRSWDELDDPKLRHLLFDEVLERVESDGDLLGDLDPPVSAAVADTLAHY 303 Query: 311 RSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPET 370 R+ R+A +TPEP+P A GNTFVIQEHHARRLHYD RLERDGVLVSWAVPK +P + Sbjct: 304 RNKRSADRTPEPIPAAVANETAGNTFVIQEHHARRLHYDVRLERDGVLVSWAVPKGVPTS 363 Query: 371 TSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGEV 430 N LAVHTEDHPLEYATF G IPKGEYG G + IWDSGTY+TEK+R+D EV Sbjct: 364 AGENRLAVHTEDHPLEYATFAGTIPKGEYGGGSMTIWDSGTYETEKWRED--------EV 415 Query: 431 IVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDT-----LAPMLTSHGSVAGLESG 485 IV L G R+ GR+ALI+T GDQWL H MKDQ A F T L PML + G++ GL+ Sbjct: 416 IVRLSGERVQGRFALIRTKGDQWLMHLMKDQNA-SFGTEFPKNLEPMLATAGTLEGLDPQ 474 Query: 486 QWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVAL 545 +WAFEGKWDG R+++E G + LRSR+G D T +YP L LAA L H VVLDGE+VA Sbjct: 475 EWAFEGKWDGIRVILEYRSGTMSLRSRAGNDKTRDYPALAGLAAVLDGHDVVLDGEVVAY 534 Query: 546 DSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETL-GSAGNLIVP 604 + +GV F +Q R F AFDLL+LDG L G G L VP Sbjct: 535 NDAGVTDFGLLQ---RGGEPVFLAFDLLYLDGVSLLRKSYSDRRTVLNALAGKVGELEVP 591 Query: 605 ELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGE 664 + G AL S GWEG++AKRR S Y PGRR S+WIK K+W TQEVVIGGWR G+ Sbjct: 592 PQIEGTAENALEVSTDAGWEGIVAKRRASVYLPGRRGSSWIKVKNWRTQEVVIGGWRTGQ 651 Query: 665 GGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPARE 724 G R+ GIG+LLMGIPG GL + GRVGTGF++RDL +L L PL ESPF+ LPA + Sbjct: 652 GNRAQGIGALLMGIPGEDGLTYVGRVGTGFSDRDLESLLAVLEPLRQKESPFEEELPADD 711 Query: 725 AKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEV 767 KG +V P LVGE R+ +WT RLR SWRGLR DK P +V Sbjct: 712 RKGAVWVRPELVGEARFMDWTATGRLRHPSWRGLREDKKPGDV 754 >tr|Q0S6K7|Q0S6K7_RHOSR Tax_Id=101510 SubName: Full=DNA ligase (ATP); EC=6.5.1.1;[Rhodococcus sp.] Length = 766 Score = 841 bits (2173), Expect = 0.0 Identities = 429/763 (56%), Positives = 523/763 (68%), Gaps = 29/763 (3%) Query: 13 NGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFF 72 +G +++LTN KVLYP + TTK +V YYT IA M+PH+ RPATRKRWPNGVD FF Sbjct: 20 DGHRLSLTNLGKVLYPESETTKGEVIDYYTRIAPAMLPHVVDRPATRKRWPNGVDSEPFF 79 Query: 73 EKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSK 132 EK LA+SAP WL R ++ H + YP+++S LAW QQAALE+HVPQWRF Sbjct: 80 EKNLAASAPAWLERRALEHSDRSVHYPLLNSVAALAWAGQQAALELHVPQWRFDGPHR-- 137 Query: 133 GEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTP 192 GPATR+VFDLDPG GV + + A+VARAVRDL+A++G + P+TSGSKG+HLY P Sbjct: 138 ------GPATRIVFDLDPGPGVGLVECAEVARAVRDLVANLGWTAYPVTSGSKGIHLYVP 191 Query: 193 LDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYS 252 LD + GA+ +AK+VA LE + P LVTATM K++RAGKVF+DWSQN+ SKTTIAPYS Sbjct: 192 LDRKLDGSGASTVAKQVATGLEKLRPELVTATMAKAVRAGKVFVDWSQNNPSKTTIAPYS 251 Query: 253 LRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXKYRS 312 LRGR QP VAAPRSW+ELDDP LRQL ++EVL R +YR Sbjct: 252 LRGRAQPYVAAPRSWDELDDPDLRQLRFEEVLERWESDGDLLAGLDPPIENDATLAEYRR 311 Query: 313 MRNASKTPEPVP-RARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETT 371 R+ +TPEP+P +P G+GN+FVIQEHHARRLHYD RLER+GVLVSWAVPKN+P TT Sbjct: 312 KRDPGRTPEPMPDTVQP--GEGNSFVIQEHHARRLHYDLRLEREGVLVSWAVPKNVPTTT 369 Query: 372 SVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGEVI 431 N LAVHTEDHPLEY TF G IPKGEYG G++ IWD+GTYDTEK+RDD EVI Sbjct: 370 GENRLAVHTEDHPLEYLTFSGTIPKGEYGGGEMAIWDTGTYDTEKWRDD--------EVI 421 Query: 432 VNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDFDT------LAPMLTSHGSVAGLESG 485 V LHG ++ GR+ALI+T GDQWL H MKDQT T L+PML S G++ GL++ Sbjct: 422 VQLHGEQVEGRFALIRTKGDQWLMHLMKDQTPGGSHTSELPRGLSPMLASPGTLDGLDAD 481 Query: 486 QWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVAL 545 +WAFEGKWDG R++ E G L+L SR+G D T +Y +L LA L DH VVLDGE+VA Sbjct: 482 EWAFEGKWDGIRVIAEISGGELKLTSRAGNDKTRDYARLGWLADALGDHEVVLDGEVVAF 541 Query: 546 DSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGS-AGNLIVP 604 D GV +F +Q + F AFD+L+LDG E L + +L+VP Sbjct: 542 DERGVANFGLLQ---QGNEPHFLAFDVLYLDGVSLLRKKYTDRRRVLEALAAKVDDLVVP 598 Query: 605 ELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGE 664 L G +AL S +GWEGV+AKRR+S Y PG+R S+WIK K+W TQE VIGGWR G+ Sbjct: 599 PQLHGSAQDALDESRGKGWEGVVAKRRESVYLPGKRGSSWIKVKNWRTQEAVIGGWRRGQ 658 Query: 665 GGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPARE 724 GGRS+GIGS+L+G+P GL + GRVGTGFTERDL L TL PL TD SPF LP + Sbjct: 659 GGRSTGIGSVLLGVPEDGGLRYIGRVGTGFTERDLQELASTLGPLETDTSPFVEDLPTAD 718 Query: 725 AKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEV 767 KG +V PTLV EVR+ +WT RLR SWRGLR DK P +V Sbjct: 719 RKGAVWVTPTLVAEVRFMDWTGSKRLRHPSWRGLRDDKAPEDV 761 >tr|Q5Z219|Q5Z219_NOCFA Tax_Id=37329 SubName: Full=Putative ATP-dependent DNA ligase;[Nocardia farcinica] Length = 808 Score = 741 bits (1913), Expect = 0.0 Identities = 414/826 (50%), Positives = 496/826 (60%), Gaps = 90/826 (10%) Query: 1 MGSAQAWPPGQANGP-QVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATR 59 M S +A+ G P +V L+N DKVLYPATGTTK +V YYT IAE M+PHIAGRP TR Sbjct: 1 MASRRAFDGGAGRPPVEVELSNLDKVLYPATGTTKGEVIAYYTAIAEAMLPHIAGRPVTR 60 Query: 60 KRWPNGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVH 119 KRWPNGV+ SFFEK LA AP WL R + H YP+IDS GLAWI QQA+LEVH Sbjct: 61 KRWPNGVEAPSFFEKNLAEHAPPWLERRVLEHSDRRVAYPLIDSEAGLAWIGQQASLEVH 120 Query: 120 VPQWRFVAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLP 179 VPQWRF + GPATR+VFDLDPG GV + + A+VA AVRD++ DIG+ P Sbjct: 121 VPQWRF--------DGAAMGPATRIVFDLDPGPGVGLPECAEVALAVRDMIEDIGMHAFP 172 Query: 180 LTSGSKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWS 239 +TSGSKG+HLY PLD +S GA+ +AK+VA LE + P LVTATM K++R GKVFLDWS Sbjct: 173 VTSGSKGIHLYVPLDRVLSPGGASTVAKQVATNLEKLRPDLVTATMAKAVRRGKVFLDWS 232 Query: 240 QNSGSKTTIAPYSLRGREQPTVAAPRSWEELDDPG-LRQLTYDEVLARL---------TX 289 QN+ +KTTIAPYSLRGR +P AAPR+W E++D LR L +DEVLAR Sbjct: 233 QNNPAKTTIAPYSLRGRAEPNAAAPRTWAEIEDAATLRHLRFDEVLARWRDDGDLLADLD 292 Query: 290 XXXXXXXXXXXXXXXXXXXKYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYD 349 KYRSMR+ ++TPEPVP P G N FV+QEHHARRLH+D Sbjct: 293 PPLSRRGADALPGGADALAKYRSMRDPARTPEPVPAEPPSRGADNRFVVQEHHARRLHWD 352 Query: 350 FRLERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDS 409 RLERDGVL SWAVPK P T N LAVHTEDHPLEY F G IPKGEYGAG++ IWD+ Sbjct: 353 VRLERDGVLASWAVPKGPPTTPKQNRLAVHTEDHPLEYLHFHGVIPKGEYGAGEMTIWDT 412 Query: 410 GTYDTEKFRDDSRNGSEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRM----------- 458 GTY+TEK+RDD EVIV HGS+++GRYALIQTNG+QWL H M Sbjct: 413 GTYETEKWRDD--------EVIVRFHGSKLTGRYALIQTNGNQWLMHLMREQPADAETPV 464 Query: 459 --------------------KDQTAFDFDT-------------------------LAPML 473 +D+TA D D L+PML Sbjct: 465 GAETPVGAEDSGGPAVDAEIRDETAGDADAAGGRRSRTTAGAEVGRRGATPVPRGLSPML 524 Query: 474 TSHGSVAGLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRS-LAADLA 532 G V L+ QW FE KWDG+RL+ E D GA+ LRSR+G VT YP++ + LA +LA Sbjct: 525 AVSGEVGPLDGEQWCFETKWDGFRLIAEIDAGAVTLRSRAGNVVTDRYPRIAAVLAEELA 584 Query: 533 DHHVVLDGELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXX 592 H VLDGE V D V +Q R EF AFD+L+LDG Sbjct: 585 GHRAVLDGEAVVFDEHNVAQVALLQ--ADPARAEFVAFDVLYLDGTSLLRKRFADRRRVL 642 Query: 593 ETLGSAG-NLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWN 651 E LG+A +L VP L G GAEAL YS + G EGVIAKR DS Y PG+R +W+K ++W Sbjct: 643 EALGAAAPSLRVPPALDGPGAEALRYSEEHGLEGVIAKRWDSVYLPGKRGHSWVKQRNWR 702 Query: 652 TQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHT 711 Q VV+GG+R G R SLL+GIP L + GRVGTGF E+D+ L + L L Sbjct: 703 IQPVVVGGYR-RSGARD--FKSLLVGIPHDGELIYVGRVGTGFGEQDMTALARRLRGLER 759 Query: 712 DESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRG 757 SPF AL A E K +V PT+ G VR+ WT RL +W G Sbjct: 760 KTSPFANALTAEERKEAVWVRPTITGRVRFMNWTDTGRLWHPAWLG 805 >tr|C2AIA4|C2AIA4_TSUPA Tax_Id=521096 SubName: Full=DNA ligase D/DNA polymerase LigD;[Tsukamurella paurometabola DSM 20162] Length = 778 Score = 737 bits (1902), Expect = 0.0 Identities = 394/781 (50%), Positives = 497/781 (63%), Gaps = 28/781 (3%) Query: 4 AQAWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWP 63 AQ + +G V LTN DKVLYPATGTTK++V YY IA V +PH+ RP TRKRWP Sbjct: 2 AQTRENREVDGVHVQLTNLDKVLYPATGTTKAEVIDYYQAIAPVAVPHLRDRPLTRKRWP 61 Query: 64 NGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQW 123 NGVD+ +FFEK+L S AP W+ R + H G + YP++++ + W+ QQAALE+HVPQW Sbjct: 62 NGVDKTAFFEKRLPSHAPAWIRRGAQHHSDGESLYPVVENTADMVWLGQQAALELHVPQW 121 Query: 124 RFVAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSG 183 F+A+ GE PGP RLV DLDPG G T+ A +A +RDLLA +GL P+TSG Sbjct: 122 TFIAD----GENEEPGPPDRLVLDLDPGPGSTLDDCAALALRIRDLLAAMGLDGHPVTSG 177 Query: 184 SKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSG 243 SKG+H+Y+ L +SS GA +A +A QLE P LVTA+M+K R G++F+DWSQNSG Sbjct: 178 SKGMHIYSTLPGGLSSPGARKVAHAIASQLEAESPELVTASMSKDQRGGRIFVDWSQNSG 237 Query: 244 SKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLT---XXXXXXXXXXXX 300 SKTTI+PYSLRGRE P VAAPRSW+EL PGL+QL + +VLAR+ Sbjct: 238 SKTTISPYSLRGREHPWVAAPRSWDELSRPGLQQLEFHDVLARVRTSGDLLAPLLSGTPA 297 Query: 301 XXXXXXXXKYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVS 360 +YR+ R+A+KTPEP A FVIQEHHARRLHYDFRLE DGVL S Sbjct: 298 PPEPVDLDEYRAKRDAAKTPEPFGGAAST--GDPIFVIQEHHARRLHYDFRLEHDGVLAS 355 Query: 361 WAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDD 420 WAVPKNLP+ +VNHLAV TEDHP++YA FEG+IPKGEYG G V IWD GTY+ EK+R D Sbjct: 356 WAVPKNLPDDPAVNHLAVRTEDHPMDYAAFEGSIPKGEYGGGDVSIWDHGTYELEKWRKD 415 Query: 421 SRNGSEKGEVIVNLHGSRISG-RYALIQTNGDQWLAHRMKDQTAFDFDTLA----PMLTS 475 EVIV LHG+R+ G RYALI+T WLAH KD+TA A PML S Sbjct: 416 --------EVIVTLHGARLRGLRYALIRTGEKNWLAHLTKDKTAPAKAAAAQAPDPMLPS 467 Query: 476 HGSVAGLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHH 535 ++ L WAFEGKWDGYR++ GAL LR+RSGR VT E+P+ SLA DL Sbjct: 468 ESTIDRLSGEDWAFEGKWDGYRIMATVRGGALSLRTRSGRVVTGEFPEFESLARDLDGMD 527 Query: 536 VVLDGELVALDSSGVPSFNEMQ-NRVRATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXET 594 VVLDGE V LD +GVPSF+ M R + + FD+L L+G E+ Sbjct: 528 VVLDGEAVVLDDAGVPSFHLMAGGESRTGAVRLYLFDVLELNGVDLTKRPWSVRREVLES 587 Query: 595 LG----SAGNLIVPELLPGD-GAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKH 649 L S ++ VP L+ G A S +RGWEG++AKRRDS Y PG+R AW+K K+ Sbjct: 588 LAPLLDSDDSIGVPALVEASTGLVAATLSAERGWEGIVAKRRDSPYLPGQRVRAWLKHKN 647 Query: 650 WNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPL 709 W +V IGGW+ G+G R++ IGS+L+G+P +GL + G VG+G +RDL L + L PL Sbjct: 648 WRDLQVAIGGWKPGKGSRANRIGSVLVGLPAETGLVYLGSVGSGLRDRDLDALAQRLEPL 707 Query: 710 HTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVR 769 SPF A++ +A+ +V P +VG+VRYS LRQ SWRG R D P ++ Sbjct: 708 RMKRSPFTASIDDPDARDAVWVLPQVVGDVRYSSLRRGGHLRQPSWRGFRDDLLPGDLPG 767 Query: 770 E 770 E Sbjct: 768 E 768 >tr|C8XIX5|C8XIX5_NAKMY Tax_Id=479431 SubName: Full=DNA polymerase LigD, polymerase domain protein;[Nakamurella multipartita] Length = 831 Score = 722 bits (1864), Expect = 0.0 Identities = 401/826 (48%), Positives = 493/826 (59%), Gaps = 79/826 (9%) Query: 11 QANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQAS 70 + +G ++ LT+ KVLYPA+GTTKS+V Y+ +A MIPH+A RP TRKRWP+GV A Sbjct: 9 EVDGHRIALTHLRKVLYPASGTTKSEVIAYFAEVAHAMIPHLADRPVTRKRWPDGVTTAP 68 Query: 71 FFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWT 130 FF K L P W+PR ++ H G YP++DS LAW+ Q AALE+HVPQW F + Sbjct: 69 FFHKDLPKGTPSWVPRRTIRHSDGPKDYPLVDSPATLAWLGQIAALELHVPQWTFGSAAA 128 Query: 131 S----KGEI----LTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTS 182 S GEI RLVFDLDPG GV + A VARAVR+ + G + +P+TS Sbjct: 129 SVAGGDGEITEAVFDAVHPNRLVFDLDPGPGVELVDCAHVARAVRERMG--GAALVPVTS 186 Query: 183 GSKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNS 242 GSKG+HLY LD ++S A+ A+ +A+ +E MP LV + M KSLR GKVF+DWSQN+ Sbjct: 187 GSKGIHLYAWLDGSLTSDDASAYAREIAEAIEQDMPDLVVSRMAKSLRRGKVFIDWSQNN 246 Query: 243 GSKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLT-------------- 288 GSKTTIAPYSLRGRE PTVAAPR+WEEL DP LR L Y EVL L Sbjct: 247 GSKTTIAPYSLRGREHPTVAAPRTWEELADPELRHLEYTEVLELLAAAPDPMQGLEDGDN 306 Query: 289 -XXXXXXXXXXXXXXXXXXXXKYRSMRNASKTPEPVPRARPV-VGQGNTFVIQEHHARRL 346 YRSMR+A KTPEPVP + G +TFVIQEHHARRL Sbjct: 307 DGAETRGGSRRRGRGPDTKLDTYRSMRSADKTPEPVPEPGLLPQGDDDTFVIQEHHARRL 366 Query: 347 HYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVII 406 HYDFRLERDGVLVSWAVPK +PE+T NHLAVHTEDHP++YA F G IP GEYG G V I Sbjct: 367 HYDFRLERDGVLVSWAVPKGVPESTGRNHLAVHTEDHPMDYADFAGEIPHGEYGGGTVSI 426 Query: 407 WDSGTYDTEKFRDDSRNGSEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQT--AF 464 WD GTY TEK+R+D EVI+ LHG + GRYALI+T G WL HRMKDQ+ Sbjct: 427 WDRGTYATEKWRED--------EVIIVLHGGKARGRYALIRTGGKNWLMHRMKDQSPQPK 478 Query: 465 DFD---------------------------TLAPMLTSHGSVAGL-ESGQWAFEGKWDGY 496 +D L PML + GSV + + +W FEGKWDG Sbjct: 479 QYDDHRPATPTAPVTARPAPARSTRPEPPKDLRPMLATAGSVEDVADERRWRFEGKWDGI 538 Query: 497 RLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFNEM 556 R + L LRSR G DVT YP+L LA L H VLDGE+VAL G SF+EM Sbjct: 539 RAIATVGPSGLTLRSRLGNDVTPTYPELAVLAELLDGHSAVLDGEIVAL-QDGRTSFHEM 597 Query: 557 QNRVRATR------------IEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNL-IV 603 Q R+ R ++FW FD+L LDG E L G + +V Sbjct: 598 QKRMNVQRARDVARVMRDVPVQFWIFDVLNLDGISLLDKRYDDRRRILEALPLTGGVCLV 657 Query: 604 PELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVG 663 P L G +AL S R WEG++AK DS YQPGRRS +W+K K++ EVV+ GW G Sbjct: 658 PPQLAGPARDALRGSADRQWEGIVAKLGDSTYQPGRRSHSWLKIKNFLDLEVVVVGWSPG 717 Query: 664 EGGRSSGIGSLLMGIP-GPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPA 722 G R +G+LL+ +P G GL +AG+VGTGFT+ L L + LAPL D S +P Sbjct: 718 TGRREGTVGALLLAVPDGAGGLRYAGKVGTGFTDAILDQLMQALAPLRADRSAVADTIPR 777 Query: 723 REAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVV 768 +A G +V P LVGEV+Y +WTP+ RLR +SWRGLRPDK ++++ Sbjct: 778 ADAAGAIWVRPELVGEVKYGQWTPERRLRATSWRGLRPDKTVADLI 823 >tr|D0L6V5|D0L6V5_GORB4 Tax_Id=526226 SubName: Full=DNA polymerase LigD, polymerase domain protein;[Gordonia bronchialis] Length = 797 Score = 695 bits (1794), Expect = 0.0 Identities = 377/801 (47%), Positives = 479/801 (59%), Gaps = 61/801 (7%) Query: 13 NGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFF 72 +G ++++TN KVLYP TGT K +V YY+ IA+V++PH+ GR TRKRWPNGV+ FF Sbjct: 12 DGHRISITNLTKVLYPQTGTRKFEVIDYYSRIADVLLPHLRGRLVTRKRWPNGVESTPFF 71 Query: 73 EKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSK 132 EK + SAP W+ R + H Y ++DS L W+AQ AALE+H QWR Sbjct: 72 EKDMPESAPAWITRHGIEHSQRVINYAVVDSRATLVWLAQMAALELHAHQWRLPV----- 126 Query: 133 GEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTP 192 I A R+V DLDPG GV + + A VAR +RDLLAD G+ T P+TSG KG+H+Y Sbjct: 127 --IDDALRANRMVLDLDPGPGVPLTECAAVARLIRDLLADAGMDTYPVTSGGKGIHVYAR 184 Query: 193 LDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYS 252 L PVS A LAK +A +L P +TATM K+ R ++F+DWSQNSGSKTT++PYS Sbjct: 185 LPRPVSPDAARTLAKEIATRLSREHPDTITATMAKTHREQRIFIDWSQNSGSKTTLSPYS 244 Query: 253 LRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARL------------------------- 287 LRGREQP VAAPR+W+ELDDPGL QL Y +VL R+ Sbjct: 245 LRGREQPWVAAPRTWDELDDPGLDQLLYTDVLDRVDERGDLLDGLDDDYPASGPPSEQTE 304 Query: 288 --TXXXXXXXXXXXXXXXXXXXXKYRSMRNASKTPEPVP-------RARPVVGQGNT-FV 337 T +YR R+A+KTPEP A+ G+ FV Sbjct: 305 VHTPRPPTEDSTGTDDRQVINLREYRRKRDAAKTPEPFGDESHQSRTAQTAAPSGDPIFV 364 Query: 338 IQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKG 397 IQEHHARRLHYDFRLE DGVLVSWAVPKNLP N LAV TEDHP++YA FEG+IP G Sbjct: 365 IQEHHARRLHYDFRLEHDGVLVSWAVPKNLPTDPDQNRLAVRTEDHPMDYADFEGDIPAG 424 Query: 398 EYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGEVIVNLHGSRISGRYALIQTNGDQWLAHR 457 EYG G V IWD GT+ TEK+R+ E+IV L G R+ GRYALI+T WLAH Sbjct: 425 EYGGGHVSIWDRGTFTTEKWREK--------EIIVRLAGERVQGRYALIKTGDKNWLAHL 476 Query: 458 MKDQTA-FDFDTLA---PMLTSHGSVAGLESGQWAFEGKWDGYRLLVEADHGALRLRSRS 513 M D+ D+L+ PML + + GL +WAFEGKWDGYR+L+ G LRL SRS Sbjct: 477 MSDEPRPIVPDSLSDPRPMLATDEDIEGLSESEWAFEGKWDGYRILLRYIGGELRLTSRS 536 Query: 514 GRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFNEMQNRVRATR---IEFWAF 570 G D+T ++P++ + L VVLDGE+VALDS+G +F + +R + + F Sbjct: 537 GIDMTRDFPEIAEITEHLGLLDVVLDGEVVALDSTGRTNFTLLTSRNHTDEPYTLRLYLF 596 Query: 571 DLLFLDGXXXXXXXXXXXXXXXETLGSAGN----LIVPELLPGDGAEALAYSHKRGWEGV 626 D+L+L+G E L A + VP LLPG G A +S + EGV Sbjct: 597 DILYLNGASLLRKTWTQRRELLEELAPAFRHSRYVEVPPLLPGPGQVAADHSREHNMEGV 656 Query: 627 IAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSGLHF 686 +AKRR S YQ GRRS++W+K K+W+ EVVIGGWR G G R + IGSLL+G+P +GL + Sbjct: 657 VAKRRSSIYQQGRRSASWLKHKNWSDIEVVIGGWRPGRGSRENTIGSLLLGLPEETGLRY 716 Query: 687 AGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTP 746 GRVGTGFT+ LA+L + L PL SPF L A +V P +VGEVR+ +WT Sbjct: 717 VGRVGTGFTDAALASLAQELEPLRISRSPFLEKLDRPVASTAIWVLPKIVGEVRFMDWTT 776 Query: 747 DDRLRQSSWRGLRPDKNPSEV 767 LR SWRG+R DK P ++ Sbjct: 777 TGHLRHPSWRGIRRDKLPGDL 797 >tr|C5BY21|C5BY21_BEUC1 Tax_Id=471853 SubName: Full=DNA polymerase LigD, polymerase domain protein;[Beutenbergia cavernae] Length = 816 Score = 669 bits (1725), Expect = 0.0 Identities = 378/822 (45%), Positives = 477/822 (58%), Gaps = 82/822 (9%) Query: 11 QANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQAS 70 + +G ++LTN DKVL+PATGTTK+++ YY IA VMIPH+AGR TRKRWPNGV+ Sbjct: 11 RVDGRVLSLTNLDKVLFPATGTTKAELIDYYRRIAPVMIPHLAGRAVTRKRWPNGVETEP 70 Query: 71 FFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWT 130 FF K L S PDW+PR +VH T+TYP+++ L W+AQ A++E+HVPQWRF Sbjct: 71 FFTKNLDSGTPDWVPRRGIVHHERTSTYPLVEDTATLVWLAQMASIELHVPQWRFP---P 127 Query: 131 SKGEILTPGPAT---RLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGL 187 + G AT R V DLDPG GV +AQ A+VA A + L D+GL+ +P+TSGSKGL Sbjct: 128 GDSPFVLDGSATRPDRFVLDLDPGPGVGLAQCAEVALAAKGYLDDVGLAAIPVTSGSKGL 187 Query: 188 HLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTT 247 HLY + VSS+ A+ AK +A L +P LV M +SLR GKVF+D+SQN+ +KTT Sbjct: 188 HLYATI-HGVSSEQASAFAKELAGHLAEDLPQLVVTQMKRSLRDGKVFVDYSQNNAAKTT 246 Query: 248 IAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXX 307 ++PYS+RGR+QP VAAPR+W EL +PGL L EVL R Sbjct: 247 VSPYSVRGRDQPWVAAPRTWGELGEPGLAHLELGEVLERAA-----DGDLLAPLLPPDPL 301 Query: 308 XKYRSMRNASKTPEPVPRARPVVGQGN--TFVIQEHHARRLHYDFRLERDGVLVSWAVPK 365 YR+ R++++TPEPVP A PV FVIQEHHARRLH+D RLE DGVL SWAVP+ Sbjct: 302 STYRAKRDSARTPEPVPFAAPVAAPAGDPRFVIQEHHARRLHWDLRLEHDGVLASWAVPR 361 Query: 366 NLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGS 425 +P TT N LAVHTEDHP+EY TF G+IPKGEYG G++ +WD+GTY EKFRDD Sbjct: 362 GVPTTTGHNRLAVHTEDHPMEYLTFHGSIPKGEYGGGEMTVWDTGTYTPEKFRDD----- 416 Query: 426 EKGEVIVNLHGSRISGRYALIQTN------GDQWLAHRMKDQTAFDFD------------ 467 EVI LHG R+ GR+ALI+T+ +QWL H MKDQ+ Sbjct: 417 ---EVIFVLHGQRVQGRFALIRTDPGRGGGKEQWLLHLMKDQSGVATSPEKRAHAVVDAP 473 Query: 468 -----------------------TLAPMLTSHGSV--AGLESGQWAFEGKWDGYRLLVEA 502 L PML + G V + +WAFE KWDGYR LV Sbjct: 474 DAAADDGAHISLSDAVEPRRIAPDLRPMLATAGQVGDGDYPAREWAFEPKWDGYRALVRF 533 Query: 503 DHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFNEMQNRVRA 562 + L+SRSGRD T E+ +L + +LA H VLD E+VALD++G PSF+ +Q R Sbjct: 534 SARGVALQSRSGRDFTQEFAELAVVPEELAAHAGVLDAEIVALDAAGRPSFHALQERGTG 593 Query: 563 TR--IEFWAFDLLFLDGXXXXXXXXXXXXXXXETL--------------GSAGNLIVPEL 606 R + FD+L LDG L G Sbjct: 594 ARPAMRLLVFDVLHLDGTSLVNKRYSDRRQVLLALPLPAADPDHLGREERDVGGWRRSVT 653 Query: 607 LPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGG 666 + AL S + EGVIAKR D+ Y PGRR AW+K KH EVVIGGWR G+G Sbjct: 654 IGTSVRAALRASAEARLEGVIAKRLDARYLPGRRGHAWVKLKHSLDAEVVIGGWRPGQGR 713 Query: 667 RSSGIGSLLMGIP-GPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREA 725 R+ GIGSLL+G+P GL + G+VGTGFT+ L L TL P SPF +P EA Sbjct: 714 RAGGIGSLLLGVPDDDGGLRYVGKVGTGFTDAALDALLATLEPRERTTSPFTTEVPRVEA 773 Query: 726 KGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEV 767 K +V P +VGEV + WT D LR + WRGLRPDK P+++ Sbjct: 774 KVAHWVRPDVVGEVTFDSWTDDGVLRAARWRGLRPDKAPADL 815 >tr|A5CSR6|A5CSR6_CLAM3 Tax_Id=443906 SubName: Full=Putative uncharacterized protein;[Clavibacter michiganensis subsp. michiganensis] Length = 832 Score = 657 bits (1695), Expect = 0.0 Identities = 377/845 (44%), Positives = 474/845 (56%), Gaps = 100/845 (11%) Query: 11 QANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGV--DQ 68 + +G ++ LTN DKVLYPATGTTK DV YY IA M+PH+ RP TRKRW +GV D+ Sbjct: 2 EVDGHRIALTNLDKVLYPATGTTKGDVIAYYAAIAPHMLPHLRDRPVTRKRWVDGVGTDE 61 Query: 69 AS---FFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRF 125 A FF+K L + P+W+ R ++ HR YP++ L W+ Q AALE+HVPQWRF Sbjct: 62 APGKMFFQKDLDAHTPEWVQRRAIQHRDHANDYPLVGDVATLTWLGQIAALELHVPQWRF 121 Query: 126 VAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSK 185 G RLV DLDPG G + + +VA+A R +L D+GL P+TSGSK Sbjct: 122 -------GRTGDERRPDRLVLDLDPGPGAGLPECVEVAKAARAILRDMGLEPYPVTSGSK 174 Query: 186 GLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSK 245 G+HLY LD + + +A +A+ LE P LV + M K+LR GKV +DWSQN+ +K Sbjct: 175 GIHLYAALDGSHDASRVSEVAHELARALEADHPDLVVSDMKKALREGKVLVDWSQNNPNK 234 Query: 246 TTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXX 305 TT+APYSLRGR +PTVA PR+W EL P L L DEV+AR+ Sbjct: 235 TTVAPYSLRGRSRPTVAVPRTWRELSSPTLLHLELDEVIARMRRRADPLAPVEEGHRESL 294 Query: 306 XXXK------------------------YRSMRNASKTPEPVPRARPVVGQGNTFVIQEH 341 + YRS R+A+KT EPVP P +G+TFVIQEH Sbjct: 295 EPTRERLAGFARKEPAADADGADDRLATYRSKRDAAKTSEPVPAESPAPSEGSTFVIQEH 354 Query: 342 HARRLHYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGA 401 HAR LH+DFRLE DGVLVSWA+PK +P NHLAV TEDHPLEY +FEG IP GEYG Sbjct: 355 HARALHWDFRLEHDGVLVSWALPKGVPTEHGTNHLAVQTEDHPLEYGSFEGTIPAGEYGG 414 Query: 402 GKVIIWDSGTYDTEKFRDDSRNGSEKGEVIVNLH----GSRISG--RYALIQTNGD---- 451 G+V IWD+GT++ EK+RD EVI LH G+ I G RYALI T G Sbjct: 415 GEVTIWDAGTFELEKWRDGE-------EVIATLHGRGDGTGIDGPRRYALIHTGGHGKVD 467 Query: 452 -QWLAHRMKDQTA-----------------------------FDFDTLAPMLTSHGSVAG 481 WL H M+ A APML + + AG Sbjct: 468 ANWLIHLMEPADAPATARAKPTRPASLEKAGGRTRVGARRKGGAASAPAPMLATAATAAG 527 Query: 482 LESG-QWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDG 540 L++ +WA E KWDGYR + G + SR+G D+T +P+L L L VLDG Sbjct: 528 LDADEEWAVEMKWDGYRAIAVVADGRATITSRNGVDLTPAFPELADLPDSLDVDAAVLDG 587 Query: 541 ELVALDSSGVPSFNEMQNRV------------RATRIEFWAFDLLFL-DGXXXXXXXXXX 587 E+V L G P F +Q R+ +A + FD L + D Sbjct: 588 EIVVLGDGGHPDFGLLQTRLGLTGEKEIARARKAAPVHLMLFDALAIGDRVLVEEPYRDR 647 Query: 588 XXXXXETLGS--AGNLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWI 645 + + S G + VP GD ALA S + G EGV+AKR D+ Y+ GRRSSAWI Sbjct: 648 RAALLDAVRSPGRGRIQVPPAFDGDLGGALATSRELGLEGVVAKRVDAPYESGRRSSAWI 707 Query: 646 KDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKT 705 K KH QEVV+GGWR G G R+SGIGSLL+G+PGP GL +AGRVGTGFTERDLA+ + Sbjct: 708 KIKHHRAQEVVVGGWRPGSGSRASGIGSLLVGVPGPDGLEYAGRVGTGFTERDLADALRR 767 Query: 706 LAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPS 765 PL SPF A +PA +A+ ++ P LVGEV ++EWT RLRQ+SWRG R DK+ Sbjct: 768 FGPLARKTSPF-ADVPAADARDAHWITPRLVGEVEFAEWTSTGRLRQASWRGWRHDKSSD 826 Query: 766 EVVRE 770 EVVRE Sbjct: 827 EVVRE 831 >tr|D1BEG9|D1BEG9_9MICO Tax_Id=446469 SubName: Full=DNA ligase D/DNA polymerase LigD;[Sanguibacter keddieii DSM 10542] Length = 852 Score = 627 bits (1618), Expect = e-177 Identities = 376/846 (44%), Positives = 463/846 (54%), Gaps = 104/846 (12%) Query: 13 NGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFF 72 +G +VTLTN KV+YP TGTTK+DV Y +A+ + H+ GRPATRKRW +G FF Sbjct: 21 DGHRVTLTNLSKVIYPETGTTKADVLAYLAAVAQPFVAHVTGRPATRKRWVHGTGGPVFF 80 Query: 73 EKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSK 132 +K L SAP W+ R + H TYP++D L W+ Q AALE+HVPQWRF Sbjct: 81 QKNLEDSAPTWVHRRDIQHSDHVNTYPLVDDLATLTWLGQVAALEIHVPQWRF------- 133 Query: 133 GEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTP 192 G RLV DLDPG G + + QVA R++L + L P+TSGSKG+HLY Sbjct: 134 GRTGVEHRPDRLVLDLDPGPGTGLDECVQVALWAREILTGMDLEPFPVTSGSKGIHLYAA 193 Query: 193 LDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYS 252 LD S + +A +A+ L+ P LV + M KSLR GKV +DWSQN+ +KTTI+PYS Sbjct: 194 LDGAHDSDAVSAVAHELARALQADHPDLVVSDMKKSLREGKVLVDWSQNNRNKTTISPYS 253 Query: 253 LRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXXK--- 309 LRGR++P VAAPRSW EL+ GL L DEV+ARL Sbjct: 254 LRGRDRPYVAAPRSWAELEAGGLTHLEADEVVARLERDGDLLAPLLTGGHAALEPTTARM 313 Query: 310 -----------YRSMRNASKTPEPVPRARPV---VGQG---------NTFVIQEHHARRL 346 YRS R+ASKTPEPVP A P G G TFVIQEHHAR L Sbjct: 314 AGFERTDRLEVYRSKRDASKTPEPVPEASPTEASPGDGPAGSADPAAPTFVIQEHHARAL 373 Query: 347 HYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVII 406 HYDFRLE DGVLVSWA+PK P T+ N L V TEDHPLEY +FEG IP+GEYGAG V I Sbjct: 374 HYDFRLEHDGVLVSWALPKGEPVDTTHNRLGVQTEDHPLEYGSFEGTIPRGEYGAGTVSI 433 Query: 407 WDSGTYDTEKFRDDSRNGSEKGEVIVNLHG------SRISGRYALIQT----NGDQWLAH 456 WD GTYD K+R E EVIV LH R S R ALI T G WL H Sbjct: 434 WDRGTYDLHKWR-------EGEEVIVTLHSDGSGGTDRGSRRIALIHTAHTGGGTSWLVH 486 Query: 457 RMKD--------------------------------QTAFDFDTLAPMLTSHGSVAGLES 484 RMKD + L PML + G+V L+ Sbjct: 487 RMKDDGHSGGGAAGASGEEDDKAEVAGSAPGEGSASSSGSRDRPLTPMLATPGTVDDLDE 546 Query: 485 GQWAFEGKWDGYRLL--VEADH----GALRLRSRSGRDVTAEYPQLRSLAADLADHHVVL 538 WAFE KWDG R + V AD G++RL SR+G D+TA YP+L +L+ +A+ VVL Sbjct: 547 DDWAFEMKWDGIRAVATVVADRDGSPGSVRLTSRNGNDLTASYPELAALSGCVAE-DVVL 605 Query: 539 DGELVALDSSGVPSFNEMQNRV------------RATRIEFWAFDLLFLDGXXXXXXXXX 586 DGE+VALD G PSF +Q+R+ +A + + AFDL+ G Sbjct: 606 DGEIVALDQGGRPSFGRLQSRMNLTARRDVAAAQKAQGVVYMAFDLVERSGRRTTRVGYD 665 Query: 587 XXXXXXETL-GSAGNLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWI 645 E L +G + VP D A ALA S + G EG++AKRR S Y+PGR + W+ Sbjct: 666 GRRAALEELVTESGPVHVPPAFTSDAASALAASKELGLEGIVAKRRSSTYRPGRPAHTWV 725 Query: 646 KDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSG-LHFAGRVGTGFTERDLANLKK 704 K KH TQEVV+ GWR G G R+ +GSLL+ +P +G L +AGRVGTGFT+ L L Sbjct: 726 KVKHVQTQEVVVVGWRTGNGARAQTLGSLLVAVPDATGTLRYAGRVGTGFTDATLERLAT 785 Query: 705 TLAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNP 764 LA P D +PA +A +V VGEV ++ WT RLR WRG R DK P Sbjct: 786 ELARNPRQTPPVD-DVPAADAGDAHWVRADRVGEVAHAGWTDQGRLRHPVWRGWRSDKAP 844 Query: 765 SEVVRE 770 +VVRE Sbjct: 845 GDVVRE 850 >tr|D1BV12|D1BV12_9MICO Tax_Id=446471 SubName: Full=DNA polymerase LigD, polymerase domain protein;[Xylanimonas cellulosilytica DSM 15894] Length = 858 Score = 606 bits (1563), Expect = e-171 Identities = 374/865 (43%), Positives = 470/865 (54%), Gaps = 124/865 (14%) Query: 13 NGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFF 72 +G ++ LTN DKVLYPATGTTK +V Y IA V++PH RPATRKRWP+GV+ FF Sbjct: 10 DGHRLQLTNLDKVLYPATGTTKGEVIDYLARIAPVLLPHARRRPATRKRWPDGVEGQVFF 69 Query: 73 EKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSK 132 +K S P W+ + H++ Y ++D L W+ Q A+LE+HVPQW+ Sbjct: 70 QKNADRSTPSWVRTHRIQHKTSANDYVLVDDVATLTWLGQTASLELHVPQWQV------- 122 Query: 133 GEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTP 192 G T P RLV DLDPGEG + + A+VAR R +L +GL LP+TSGSKG+HLY Sbjct: 123 GRTGTHLPPDRLVLDLDPGEGAGLPECAEVARLARAILQGMGLEPLPVTSGSKGIHLYAA 182 Query: 193 LDEPVSSKGA--------TVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGS 244 L S +GA T +A +A+ LE P LV + M KSLR GKV +DWSQN+G+ Sbjct: 183 LSAGSSPEGAKPSSAEQITDVAHELARYLEAEHPDLVVSDMKKSLRGGKVLVDWSQNNGA 242 Query: 245 KTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXX 304 KTTIAPYSLRGR +PTVAAPR+W ELDDP LRQL+Y+EVL R+ Sbjct: 243 KTTIAPYSLRGRTRPTVAAPRTWAELDDPDLRQLSYEEVLDRVARDGDLLAGLTAGHLSQ 302 Query: 305 XXXXK-----------YRSMRNASKTPEPVPRARPV------------------------ 329 Y + R+ ++TPEP A P Sbjct: 303 LEPTPAHLARFERLATYNAKRDPARTPEPFDTAPPAPVVEPVETTPPVGGVSTGSTTGVG 362 Query: 330 --VGQGNT-------FVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHT 380 +G G+T FVIQEHHARRLH+DFRLERDGVLVSWA+PK P NHLAV T Sbjct: 363 STIGVGSTTGVGAPTFVIQEHHARRLHWDFRLERDGVLVSWALPKGEPTDPGTNHLAVQT 422 Query: 381 EDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGEVIVNLHGSRI- 439 EDHPL Y FEG IP GEYGAG+V IWDSGTY+TEK+RD EVI LH R Sbjct: 423 EDHPLAYGGFEGTIPNGEYGAGEVTIWDSGTYETEKWRDGK-------EVIAVLHSERRG 475 Query: 440 SGRYALIQTN---GD-QWLAHRMKDQTAFDFDT-----------------------LAPM 472 + R ALI+T GD QWL HR K Q A D + L PM Sbjct: 476 TRRLALIRTGRAEGDNQWLIHRTKAQPAEDVASPAPVVEPVETTTPTRSTAEVAVRLEPM 535 Query: 473 LTSHGSVAGL-------ESGQ--WAFEGKWDGYRLLVEADHG-----ALRLRSRSGRDVT 518 L S A + ESG W FE KWDGYR L + G A+RL SR+G+D T Sbjct: 536 LASAAQPAEVRALEADGESGSHDWVFEMKWDGYRTLAVVEPGPDGTRAIRLTSRTGQDFT 595 Query: 519 AEYPQLRSLAADLADH-HVVLDGELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFL-D 576 YP+L LAA + VVLD E+VALD++G P F +Q A +E FD+L + D Sbjct: 596 RTYPELAPLAAQVTGELPVVLDAEIVALDAAGRPDFRRLQQH--AGNVELMVFDVLQVGD 653 Query: 577 GXXXXXXXXXXXXXXXETLGSAGNLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQ 636 + L + + +P GD AL S + EGV+AKRR+S YQ Sbjct: 654 RSLLHTPYDERRTVLADVLDARRPVHLPAAFDGDLTAALETSRRLRLEGVMAKRRESTYQ 713 Query: 637 PGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSG----IGSLLMGIPGPSG-LHFAGRVG 691 PGRR+ W+K KH QEVV+ GWR G + G LL+ +P G L + GRVG Sbjct: 714 PGRRTRQWLKLKHTAVQEVVVVGWRPLRAGETDEDPRYAGGLLLAVPADDGALRYVGRVG 773 Query: 692 TGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWT------ 745 TGF++ + ++ LA + P D +P +A +V P LVGEV ++EWT Sbjct: 774 TGFSDAERRDVATRLAAVERKTPPLD-GVPRPDAAHTRWVTPRLVGEVEFAEWTGDPTDD 832 Query: 746 PDDRLRQSSWRGLRPDKNPSEVVRE 770 P+ RLR + WRG RPDK P++VV E Sbjct: 833 PEARLRAARWRGWRPDKEPADVVVE 857 >tr|B8HAQ8|B8HAQ8_ARTCA Tax_Id=452863 SubName: Full=DNA polymerase LigD, ligase domain protein; EC=6.5.1.1;[Arthrobacter chlorophenolicus] Length = 828 Score = 600 bits (1546), Expect = e-169 Identities = 360/847 (42%), Positives = 460/847 (54%), Gaps = 112/847 (13%) Query: 14 GPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQAS--- 70 G ++TLTN DK++YP TGTTK+DV YY +A V+IP A RPATRKRW NGV A Sbjct: 3 GRELTLTNLDKIIYPETGTTKADVLAYYAAVAHVLIPAAANRPATRKRWVNGVGTAEKPG 62 Query: 71 --FFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE 128 FF+K L SAPDWLPRA++ H+ T YP+++ L W Q +LE+HVPQWR Sbjct: 63 EVFFQKNLEDSAPDWLPRAAITHKDRTIHYPMVNDPAVLTWFGQINSLEIHVPQWRV--- 119 Query: 129 WTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLH 188 S+G L P RLV DLDPGEG +A +VA R +L D+GL+ +P+TSGSKG+H Sbjct: 120 -DSQGTQLNPD---RLVLDLDPGEGAGLADCREVALLARAILQDVGLAPVPVTSGSKGIH 175 Query: 189 LYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTI 248 LY PLD +S + A+ +A+ LE+ P L + M K+LR GKV +DWSQN+ +KTTI Sbjct: 176 LYAPLDGTQTSDQISEFARELARALESDHPDLAVSDMKKTLRKGKVLVDWSQNNAAKTTI 235 Query: 249 APYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARL------------------TXX 290 PYSLRGR P VAAPR+W E+ P L+ L Y EVL R+ Sbjct: 236 VPYSLRGRPTPMVAAPRTWREISSPRLKHLDYQEVLRRVQDGKDPFAAVVRAAGTLDDGD 295 Query: 291 XXXXXXXXXXXXXXXXXXKYRSMRNASKTPEP---VPRARPVVGQGNTFVIQEHHARRLH 347 KYR+MR+ TPEP PR G+ FVIQEHHA RLH Sbjct: 296 GGTGTAQDGTHDGHPRLAKYRAMRDPKATPEPFSGAPRG------GDAFVIQEHHASRLH 349 Query: 348 YDFRLERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIW 407 +D RLE +GVL SWA+PK +PE+ NHLAV TEDHP++Y TF G IPKGEYGAG + IW Sbjct: 350 WDLRLEHEGVLASWALPKGVPESGGKNHLAVQTEDHPMDYLTFHGTIPKGEYGAGDMTIW 409 Query: 408 DSGTYDTEKFRDDSRNGSEKGEVIVNLHGSRISG-----RYALIQTN-------GDQWLA 455 D+GTY+ K+ NG EVIV L GS G + ALI T QWL Sbjct: 410 DTGTYELHKW----INGK---EVIVTLTGSEGGGLGGTRKVALIHTGRGQGSDAEKQWLI 462 Query: 456 HRM--KDQTA------------------------------------FDFDTLAPMLTSHG 477 H M +DQ A D + PM+ + G Sbjct: 463 HLMDKEDQGARRRHAPSSAEPAGSAEDVGSAGKSGDASNEQAGAKQVSPDDVRPMMATAG 522 Query: 478 SVAGLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVV 537 + L W E KWDG R ++ AD ++R+ SR+G DVT YP+L + V Sbjct: 523 VPSDLLGSDWQVELKWDGVRAILVADESSVRIFSRNGNDVTRTYPELTDRRC-WPEQPFV 581 Query: 538 LDGELVALDSSGVPSFNEMQNRVRATR------------IEFWAFDLLFLDGXXXXXXXX 585 DGE++A+ SG P F +Q R++ TR + FDLL G Sbjct: 582 ADGEIIAVGPSGRPDFGLLQGRMKLTRAADVVKAQKALPVRLMLFDLLHDGGTDLRRLPL 641 Query: 586 XXXXXXXETLGSAGNLIVP-ELLPGDGAEALAYSHKR-GWEGVIAKRRDSGYQPGRRSSA 643 E + V ++ D E + S + G EGV+AKR DS Y G+R+ Sbjct: 642 RARRQRLEQFFQPSDCPVELSMVLEDPVEHIMDSARELGLEGVMAKRTDSRYVSGQRTRT 701 Query: 644 WIKDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLK 703 WIK K TQEVV+GGWR G+GGR +GSLL+GIP + L + GRVG+GF+ R+LA L+ Sbjct: 702 WIKLKTERTQEVVVGGWRPGKGGRQETVGSLLVGIPDGNKLQYVGRVGSGFSGRELAELR 761 Query: 704 KTLAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKN 763 +T+ L SPF +P ++ +V P LVGEV Y EWT RLR WRG R DK+ Sbjct: 762 QTVEQLARKTSPFH-EVPRPDSADAHWVTPQLVGEVTYGEWTGPGRLRHPRWRGWRLDKD 820 Query: 764 PSEVVRE 770 PSEVVRE Sbjct: 821 PSEVVRE 827 >tr|A0JRM5|A0JRM5_ARTS2 Tax_Id=290399 SubName: Full=DNA ligase (ATP); EC=6.5.1.1;[Arthrobacter sp.] Length = 845 Score = 599 bits (1544), Expect = e-169 Identities = 355/845 (42%), Positives = 457/845 (54%), Gaps = 101/845 (11%) Query: 14 GPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQAS--- 70 G ++ +TN DKV+YP TGTTK+DV YYT +A V++P RPATRKRW NGV A Sbjct: 12 GRELVVTNLDKVMYPETGTTKADVLAYYTAVAPVLVPAAVNRPATRKRWVNGVGTAEAPG 71 Query: 71 --FFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE 128 FF+K L S P W+PRAS+ H+ T YP+++ A L W+AQ +LE+HVPQWR Sbjct: 72 EMFFQKNLEDSTPGWIPRASIRHKERTNQYPLVNDAATLIWLAQMGSLEIHVPQWRV--- 128 Query: 129 WTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLH 188 G + P RLV DLDPGEG +A+ A+VAR R +L D+GL +P+TSGSKG+H Sbjct: 129 -DPHGNPMNPD---RLVLDLDPGEGAGLAECAEVARLARAILRDVGLDPIPVTSGSKGVH 184 Query: 189 LYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTI 248 LY LD SS + A +A+ LE+ P L + M K+LR GKV +DWSQN+ +KTTI Sbjct: 185 LYAGLDGTQSSDQISEFAHELARALESDHPDLAVSDMKKTLRTGKVLVDWSQNNAAKTTI 244 Query: 249 APYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARL--------------------- 287 PYSLRGR +PTVAAPR+W EL P L+QL Y EV+ R+ Sbjct: 245 VPYSLRGRLRPTVAAPRTWRELASPKLKQLDYREVMRRVKDGKDPFAPVSAGGSHVRGHP 304 Query: 288 ----TXXXXXXXXXXXXXXXXXXXXKYRSMRNASKTPEPVPRAR----PVVGQ-GNTFVI 338 + KYRSMR+ TPEP R P G FVI Sbjct: 305 GGGGSAAGPRDSTTADGGSTDPRLEKYRSMRDPEGTPEPFSADRHGADPNAGTIRERFVI 364 Query: 339 QEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGE 398 QEHHA RLHYDFRLERDGVLVSWA+PK +P + + NHLAV TEDHP++Y FEG IPKG+ Sbjct: 365 QEHHASRLHYDFRLERDGVLVSWALPKGVPTSGTQNHLAVQTEDHPMDYLDFEGTIPKGQ 424 Query: 399 YGAGKVIIWDSGTYDTEKFRDDSRNGSEKGEVIVNLHGSRISG--RYALIQTNGD----- 451 YGAG V IWD G Y+ +K+ G E + G + G ++ALI+T+ D Sbjct: 425 YGAGNVTIWDHGYYECDKWIA----GKEVIATLTGADGGGLGGTRKFALIRTSRDSDTSK 480 Query: 452 -----QWLAHRM------------------------KDQTAFDFDT---LAPMLTSHGSV 479 QWL H M +D+ D PM+ S G+ Sbjct: 481 SPEQAQWLIHLMDRKGHAPAATGTPPATGGPAEAAKQDEPPPDLSPAPDFLPMMASAGTP 540 Query: 480 AGLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLD 539 A L W FE KWDG R L+ D +RL SR+G D+TA YP+L + + D Sbjct: 541 ADLRGLDWQFELKWDGIRALIIGDADRIRLISRNGNDMTASYPELTDRSC-WPEQSFTAD 599 Query: 540 GELVALDSSGVPSFNEMQNRVR------------ATRIEFWAFDLLFLDGXXXXXXXXXX 587 GE+VA+ SG P F +Q R++ AT + FDLL G Sbjct: 600 GEIVAVGPSGRPDFGLLQTRMKLTKAADVAKARAATPVRLMVFDLLSDAGEDLRRMPLRR 659 Query: 588 XXXXXETLGSAGNLIV--PELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWI 645 E L V E+L + L + + G EG++AKR D Y G RS +W+ Sbjct: 660 RRARLEQLDWPDGCPVHLSEVLDHEVEHILESARELGLEGIMAKRLDGRYVSGERSRSWL 719 Query: 646 KDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKT 705 K K TQEVV+GGWR G+G R +GSLL+GIP + L + GRVG+GF++R+L L+ Sbjct: 720 KLKFERTQEVVVGGWRPGKGSRQGSVGSLLVGIPDGAKLRYVGRVGSGFSDRELKELRLQ 779 Query: 706 LAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPS 765 + L SPF +PA +A +VAP LVGEV + EWT +LR WRG R DKN Sbjct: 780 VDTLSRKTSPF-TEVPAADASDAHWVAPGLVGEVTFGEWTGGGKLRHPVWRGWRLDKNAD 838 Query: 766 EVVRE 770 +VV E Sbjct: 839 DVVAE 843 >tr|A1R1J1|A1R1J1_ARTAT Tax_Id=290340 SubName: Full=ATP-dependent DNA ligase domain protein;[Arthrobacter aurescens] Length = 851 Score = 597 bits (1539), Expect = e-168 Identities = 352/851 (41%), Positives = 449/851 (52%), Gaps = 114/851 (13%) Query: 14 GPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQAS--- 70 G ++TLTN +K++YP TGTTK++V YY +A +IP A RP TRKRW NGV A Sbjct: 13 GHELTLTNLNKIIYPETGTTKAEVLEYYAAVAPFLIPAAANRPVTRKRWVNGVGTAENPG 72 Query: 71 --FFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE 128 FF+K L SAP W+PRA++ H T YP++++ L W+AQ A+LE+HVPQW+ Sbjct: 73 QVFFQKNLEDSAPKWIPRAAIQHSDHTNVYPMVNNLATLTWMAQIASLEIHVPQWQV--- 129 Query: 129 WTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLH 188 G+ L P R V DLDPG G + + +VA+ R +L D+G+ +P+TSGSKG+H Sbjct: 130 -DPSGKPLRPD---RFVLDLDPGPGAGLPECVEVAKLARSILQDMGMDPVPVTSGSKGIH 185 Query: 189 LYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTI 248 LYT LD + S+ + AK +A+ LE+ P LV + M KSLR GKV +DWSQNSG+KTTI Sbjct: 186 LYTGLDGTLKSEQVSAFAKELARALESDHPELVVSDMKKSLRHGKVLVDWSQNSGNKTTI 245 Query: 249 APYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTXXXXXXXXXXXXXXXXXXXX 308 PYSLRG+ PTVAAPR+W EL P L L Y V+ R+ Sbjct: 246 VPYSLRGKAHPTVAAPRTWRELSSPSLEHLDYVAVMKRVKTGKDHFAPISERHLPPHGED 305 Query: 309 -----------------------------KYRSMRNASKTPEPVPRARPVVGQ------- 332 KY MR+ KTPEP P + V Sbjct: 306 ENDDDGTAGSSSGTGRSRERVVTVENRLAKYVGMRDPGKTPEPFPSSSAVSASPQSAGSS 365 Query: 333 ------------GNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHT 380 G FVIQEHHARR H D RLE GVL SWA+P+ +PET N+LAVHT Sbjct: 366 SDQPKPGDPPPPGGIFVIQEHHARRYHLDLRLEHHGVLASWALPRGIPETPDRNNLAVHT 425 Query: 381 EDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGEVIVNLHGSRIS 440 EDHP+EYA F G IPKGEYGAG + IWD G Y EK+RD EVI L G Sbjct: 426 EDHPMEYANFAGVIPKGEYGAGTMTIWDRGEYTCEKWRDGK-------EVIATLTGEPGG 478 Query: 441 G-----RYALIQTNGDQWLAHRMKDQTAFDFDT-----------------------LAPM 472 G R+ALI T G WL H MK+Q T +PM Sbjct: 479 GLGGTKRFALINT-GQNWLIHLMKEQPGGRRGTQPAANAAAPKSAPAQPQPQPMPNYSPM 537 Query: 473 LTSHGSVAGLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLA 532 L + G+ A L W +E KWDG R ++ +RL SR+G D+TA YP+L A Sbjct: 538 LATSGTTADLRGDDWLYELKWDGIRAIITGTESRIRLMSRNGNDLTAAYPELTDRAC-WP 596 Query: 533 DHHVVLDGELVALDSSGVPSFNEMQ-----------NRVRAT-RIEFWAFDLLFLDGXXX 580 D V DGE+VAL P F +Q R RAT ++ FDLL+ DG Sbjct: 597 DGDFVADGEIVALGKGSRPDFGRLQLRMNLVKAADIERARATVPVQLMLFDLLYDDGTDL 656 Query: 581 XXXXXXXXXXXXETLGSAGNLIVP----ELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQ 636 + P +L D + + + + G EGV+AK+ DS Y Sbjct: 657 SGLPFHERRERLSGFAERWRVGCPLHLSAVLDHDVEDLMTSAAELGLEGVMAKKADSRYV 716 Query: 637 PGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTE 696 GRRS +WIK K +QEVV+GGWR G G R+ G+LL+GIP LH+ GRVG+GF + Sbjct: 717 IGRRSRSWIKLKLEQSQEVVVGGWRPGAGARAGTFGALLLGIPDGDKLHYVGRVGSGFKD 776 Query: 697 RDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWR 756 L ++ + L PL ESPF A +P +A G T+V+P LV EV + EWT RLR WR Sbjct: 777 WQLRDIMEKLEPLAIVESPF-ADIPREDAAGATWVSPELVAEVTFGEWTGPGRLRHPVWR 835 Query: 757 GLRPDKNPSEV 767 G RPDK+ EV Sbjct: 836 GWRPDKSAGEV 846 >tr|C7M9M4|C7M9M4_BRAFD Tax_Id=446465 SubName: Full=DNA ligase D/DNA polymerase LigD;[Brachybacterium faecium] Length = 847 Score = 595 bits (1535), Expect = e-168 Identities = 355/850 (41%), Positives = 459/850 (54%), Gaps = 108/850 (12%) Query: 11 QANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQAS 70 + +G ++ L+N DKVLYP TGT K +V YY IA V++P RPATRKRW +GV A Sbjct: 9 EIDGRRLKLSNLDKVLYPQTGTIKGEVIDYYHRIAPVLVPQATRRPATRKRWVDGVGTAQ 68 Query: 71 -----FFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRF 125 FF K L S AP W+PRA + H GT+TYP++D L W+AQ AALEVH PQWRF Sbjct: 69 SPGKVFFRKDLESHAPQWVPRADIQHSDGTSTYPLVDEPAVLVWLAQLAALEVHTPQWRF 128 Query: 126 VAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSK 185 + L P P RLV DLDPGEG + + A+VA R++L D+GL + P+TSGSK Sbjct: 129 -------DDALAPAPPDRLVLDLDPGEGAGLPECARVAAWCREILTDMGLESYPVTSGSK 181 Query: 186 GLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSK 245 G+HLY PLD S+ +A +A+ LET P V +T T++ RAGKV +DWSQN+GSK Sbjct: 182 GIHLYAPLDGSADSEEVDAVAHELARALETDHPEEVISTQTRAKRAGKVLVDWSQNNGSK 241 Query: 246 TTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARL-------------TXXXX 292 TT+ PYSLRGR +PTVAAPR+WEE++DP L QL DEVLAR+ Sbjct: 242 TTVCPYSLRGRLRPTVAAPRTWEEVEDPALAQLELDEVLARVEDGVDPLAPLGLAAEGDA 301 Query: 293 XXXXXXXXXXXXXXXXKYRSMRNASKTPEPVPRA--------RPVVGQGNTFVIQEHHAR 344 YR+ R+ +TPEPVP A + + FVIQEHHA Sbjct: 302 EETGPSSAGRARDRLEAYRAKRDPERTPEPVPEAGIGSDAAQEALEDEEPMFVIQEHHAS 361 Query: 345 RLHYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKV 404 LH+DFRL+ GVLVSWAVPK P V LAV TEDHPLEY TFEG IP+ EYG G V Sbjct: 362 SLHWDFRLQHAGVLVSWAVPKGPPLEVDVKRLAVQTEDHPLEYGTFEGTIPEDEYGGGDV 421 Query: 405 IIWDSGTYDTEKFRDDSRNGSEKGEVIVNLHGSRISG------RYALIQTNG-------- 450 +WD+G+ + EK+R+D EVIV HG G R+ + T G Sbjct: 422 TLWDAGSIEIEKWREDR-------EVIVVCHGRPDGGLGGVPRRFVFLHTGGMRGGRRTA 474 Query: 451 -------DQWLAHRMKDQTAFDF--------------------------DTLAPMLTSHG 477 WL H MKDQ D + LAPML + G Sbjct: 475 AAKEKAEANWLLHLMKDQPEPDASRSDDAAPAPEDDAAAPEDAPVAELGEPLAPMLATLG 534 Query: 478 SVAGL-ESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSL-----AADL 531 + + WA+E KWDG R++ +RL SR G+D+TA +P+L L A Sbjct: 535 RREDIRDEDDWAYEMKWDGVRVIATVRGTTVRLTSRGGKDMTAAFPELAELLDAVEPALR 594 Query: 532 ADHHVVLDGELVALDSSGVPSFNEMQNRVRATR------------IEFWAFDLLFLDG-X 578 VLDGE+VALD PSF+ +Q R+ TR FDLL G Sbjct: 595 EAGETVLDGEIVALDRHDRPSFSRLQQRLGLTRQRDVDRARQQVEAHVMLFDLLVRGGDS 654 Query: 579 XXXXXXXXXXXXXXETLGSAGNLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPG 638 + + ++ +P G+ EA+A S + EGV+AK+ YQPG Sbjct: 655 LLRTPYRERREQLFAAVHATEHVQLPHADHGEVEEAIALSKRLQLEGVMAKKESGVYQPG 714 Query: 639 RRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSG-LHFAGRVGTGFTER 697 +R+ WIK K+ QEVV+ GWR G+G RS +GSLL+ +P G L +AGRVGTGFT+R Sbjct: 715 KRTRTWIKLKNARHQEVVVIGWRHGKGERSGSLGSLLLAVPDSEGELRYAGRVGTGFTDR 774 Query: 698 DLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRG 757 DL + L P D +PA + + +V LVGEV+++E T D RLR WRG Sbjct: 775 DLEEIAARLRSRSRKTPPVD-DVPAADRRDAEWVRADLVGEVQHTERTADGRLRHPVWRG 833 Query: 758 LRPDKNPSEV 767 RP+KN +++ Sbjct: 834 WRPEKNVADL 843 >tr|C7NKD9|C7NKD9_KYTSD Tax_Id=478801 SubName: Full=DNA ligase D/DNA polymerase LigD;[Kytococcus sedentarius] Length = 878 Score = 573 bits (1476), Expect = e-161 Identities = 372/874 (42%), Positives = 461/874 (52%), Gaps = 138/874 (15%) Query: 17 VTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQAS-----F 71 +++++ DKVLYP GTTK+DV YY +AEV++P +AGRP TRKRW +GV F Sbjct: 16 LSVSSLDKVLYPEAGTTKADVVHYYLSVAEVLLPQLAGRPVTRKRWVDGVGTEGDPGEVF 75 Query: 72 FEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTS 131 F K L SAPDW+P +VH + +YP+ A LAW AQ AALE+H PQWRF Sbjct: 76 FRKDLEDSAPDWIPTGRIVHANRANSYPLATEAAVLAWFAQVAALELHTPQWRF------ 129 Query: 132 KGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYT 191 G P RLV DLDPGEGV + + AQVAR R++L + L P+TSGSKG+HLY Sbjct: 130 -GPDGQPRRPDRLVLDLDPGEGVGLTECAQVARWCREVLDGMALEAFPVTSGSKGIHLYA 188 Query: 192 PLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPY 251 LD ++ + +A +A+ LE P LV +TM ++ RAGKVFLDWSQN+ SKTT+APY Sbjct: 189 ALDGTHDAEAVSAVAHELARALEADHPDLVVSTMKRARRAGKVFLDWSQNNASKTTVAPY 248 Query: 252 SLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLAR----------LTXXXXXXXXXXXXX 301 SLRGR +PTVAAPR+WEELDDPGL QL DEVL R L Sbjct: 249 SLRGRARPTVAAPRTWEELDDPGLAQLELDEVLDRVADGIDPVASLGAGTGPGGAGEVSS 308 Query: 302 XXXXXXXKYRSMRNASKTPEPVPRARPVV-----GQGNTFVIQEHHARRLHYDFRLERDG 356 YRSMR+ +T EPVP P G+ +FVIQEHHA LH+DFRLE G Sbjct: 309 PAPDRLRTYRSMRDPDRTAEPVPADPPREREAPDGELPSFVIQEHHASSLHWDFRLEHSG 368 Query: 357 VLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEK 416 VLVSWAVPK P N LAV TEDHPLEY TFEG I GEYGAG+V IWD+GTY+ +K Sbjct: 369 VLVSWAVPKGPPLEHDTNRLAVMTEDHPLEYGTFEGTIAAGEYGAGEVTIWDAGTYERKK 428 Query: 417 FRDDSRNGSEKGEVIVNLHGSRISG------RYALIQTNG----DQWL------------ 454 +R E EVI LHG G R+ALIQ G WL Sbjct: 429 WR-------EGKEVIAVLHGRPDGGLGGVPRRFALIQATGMGSERNWLLRLTDEQPGAGH 481 Query: 455 -------------------AHRMKDQTA------------FDFDTLAPMLTSHGSVAGLE 483 A R +TA D A M + G+ +E Sbjct: 482 PQDGSPEEVTAAPSPSRSRADRSDSRTARRALRRRPAPGFTVADLPAAMAATAGTPEQVE 541 Query: 484 SG-----QWAFEGKWDGYRLL--------------VEADHGALR-----LRSRSGRDVTA 519 +WAFE KWDGYR++ +AD GA R L SR+G+D+T Sbjct: 542 RAVAGGQEWAFEMKWDGYRVVAGVRTAGQGPADADADADAGAEREGAVVLASRNGKDLTD 601 Query: 520 EYPQ----LRSLAADLADH-HVVLDGELVALDSSGVPSFNEMQNRV----------RATR 564 +P R L + A+ VLDGELVALD G P F +Q + Sbjct: 602 TFPAAVELTRLLRGEAAERGGAVLDGELVALDDRGRPDFGLLQAALGDGPGVNAAGDPIE 661 Query: 565 IEFWAFDLLFLDG---------XXXXXXXXXXXXXXXETLGSAGNLI-VPELLPGDGAEA 614 + + FDLL L E LG+ G+ + VP G A+A Sbjct: 662 LRYLVFDLLQLGAPGDPEDRQRSLLRIPWGERRELLREVLGTGGDAVSVPPAHTGTLAQA 721 Query: 615 LAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSL 674 S G EGV+AKR D+ Y PG+R SAW+K K QEVV+ G R G GGRS GIGSL Sbjct: 722 QRASRGLGLEGVVAKRVDAVYLPGQRGSAWVKLKTQRHQEVVVIGVRQGRGGRSGGIGSL 781 Query: 675 LMGIPGPSG-LHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAP 733 L+ + G L +AGRVGTGF+ LA+++KTL + P D +PA + +V P Sbjct: 782 LVAVGDDEGELRYAGRVGTGFSAAQLADIEKTLRRIERKTPPVD-DVPAADRTDAWWVTP 840 Query: 734 TLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEV 767 LVGEV + T D R+RQ+ WRG RPDK EV Sbjct: 841 RLVGEVSLAGRTRDQRVRQAVWRGWRPDKEAGEV 874 >tr|C7Q6S2|C7Q6S2_CATAD Tax_Id=479433 SubName: Full=DNA polymerase LigD, ligase domain protein;[Catenulispora acidiphila] Length = 495 Score = 367 bits (941), Expect = 4e-99 Identities = 218/497 (43%), Positives = 278/497 (55%), Gaps = 47/497 (9%) Query: 310 YRSMRNASKTPEPVPRARPVV----------GQGNTFVIQEHHARRLHYDFRLERDGVLV 359 YR+ R+A++TPEPVP A P G+ FV+QEH A LH+DFRLERDGVLV Sbjct: 9 YRAKRDAARTPEPVPEAAPETAPEAKPRTRRGRKPIFVVQEHRATALHWDFRLERDGVLV 68 Query: 360 SWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRD 419 SWA+PK +P NH AVHTEDHP+EYA F G IP GEYGAG V +D GTY EK+ D Sbjct: 69 SWALPKGVPTDPKRNHRAVHTEDHPVEYADFTGRIPAGEYGAGTVATYDRGTYVVEKWTD 128 Query: 420 DSRNGSEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDF----DTLAPMLTS 475 D EV V L G R+SG Y L +T G W+ HR K Q DF D L PML Sbjct: 129 D--------EVKVELTGERLSGHYTLFRTGGSDWMIHREKGQDP-DFAAVPDDLRPMLAI 179 Query: 476 HGSVAGLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHH 535 G+ WA E KWDG R L + G RLRSR+G D++ YP+L++LA ++ Sbjct: 180 PGTAPA--GAGWACEFKWDGIRALCRVEGGRARLRSRNGNDLSETYPELKALAKTVSSAQ 237 Query: 536 VVLDGELVALDSSGVPSFNEMQNRV-----------RATRIEFWAFDLLFLDGXXXXXXX 584 ++LDGE++ALD G SF +Q R R + FDLL LDG Sbjct: 238 LLLDGEIIALDEDGKVSFGALQTRFGTSGSEAARLSRTNPASYLVFDLLHLDGRSTLDLP 297 Query: 585 XXXXXXXXETLGSAG-NLIVPELLPGDG-AEALAYSHKRGWEGVIAKRRDSGYQPGRRSS 642 E+L +G + P P A+ L + G EGV+AKR DS YQPG RS Sbjct: 298 YKDRRELLESLELSGPHWQTPPSFPDTPVADVLEAARAAGLEGVVAKRLDSTYQPGTRSP 357 Query: 643 AWIKDKHWNTQEVVIGGW--------RVGEGGRSSGIGSLLMGIPGPSG-LHFAGRVGTG 693 AW K K +Q VIGG+ G R S IG+LL+G+P +G L + G+VG+G Sbjct: 358 AWRKVKLTESQSAVIGGFTPLKSQGAATGRAARGSQIGALLLGVPDEAGRLRYVGKVGSG 417 Query: 694 FTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQS 753 FTE+D L + L+ L ESPF A+ A +A+ T+V P +V EV + EWT RLR Sbjct: 418 FTEQDRRVLLEALSELAVAESPFATAVDAVDARVATWVEPVVVAEVTFGEWTSKGRLRHP 477 Query: 754 SWRGLRPDKNPSEVVRE 770 ++G+R DK+ +EVVRE Sbjct: 478 VFKGIRTDKDAAEVVRE 494 >tr|C7MQ31|C7MQ31_SACVD Tax_Id=471857 SubName: Full=DNA ligase D/DNA polymerase LigD;[Saccharomonospora viridis] Length = 477 Score = 361 bits (926), Expect = 2e-97 Identities = 208/480 (43%), Positives = 257/480 (53%), Gaps = 28/480 (5%) Query: 309 KYRSMRNASKTPEPVPRAR--PVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKN 366 +YR+ R TPEP+P G G+TFV+ EHHAR LH+D RLERDG L+S+AVPK Sbjct: 7 QYRNKRRKGHTPEPIPSVTLASTEGHGDTFVVHEHHARNLHWDVRLERDGRLISFAVPKG 66 Query: 367 LPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSE 426 LP LAV TEDHPLEY+TF G IPKGEYG G + IWD GTY+T K+ + Sbjct: 67 LPTEPGTVRLAVRTEDHPLEYSTFSGEIPKGEYGGGHMSIWDRGTYETLKWGES------ 120 Query: 427 KGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQTAFDF----DTLAPMLTSHGSVAGL 482 +V + LHG R+ G+Y +T W R ++ L PML GS+ Sbjct: 121 --KVSIVLHGERVHGKYVFFRTRESDWSVVRSDPPDDPEWTPIPSLLKPMLAVTGSLPDP 178 Query: 483 ES-GQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGE 541 E WA+E KWDG R L + G + L SR G D+T YP+LR+L DL LDGE Sbjct: 179 EEDSDWAYEFKWDGVRALARVEGGRVTLFSRRGDDITGIYPELRALGEDLGSTQAWLDGE 238 Query: 542 LVALDSSGVPSFNEMQNRVRA-----------TRIEFWAFDLLFLDGXXXXXXXXXXXXX 590 +VA G P F +Q R+ A + + + FDLL LDG Sbjct: 239 IVAF-RDGRPHFATLQGRINAGAQKARRLSQRSPVTYLVFDLLHLDGHSCMGLPYWQRRN 297 Query: 591 XXETLGSAG-NLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKH 649 E L G + P PG G + ++ EGV+AKR DS Y+PG RS W K Sbjct: 298 LLEQLDITGEHWRTPPSFPGAGRAVTEAAAEQRLEGVVAKRLDSPYRPGERSVDWRKITE 357 Query: 650 WNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPL 709 T EVVIGGWR G G RS GSLL+GIP L + G+VGTGF E L L L L Sbjct: 358 LRTLEVVIGGWRQGRGRRSDTFGSLLLGIPNDGRLQYIGQVGTGFDEDALHALTSRLHRL 417 Query: 710 HTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVR 769 SPF ALP G +V+P LVGEV + WT D RLR +WRGLRPD++P E+ R Sbjct: 418 ERRTSPFSEALPKDRTSGAHWVSPRLVGEVAFKSWTDDGRLRAPTWRGLRPDRDPEELAR 477 >tr|Q0RHK2|Q0RHK2_FRAAA Tax_Id=326424 SubName: Full=Putative uncharacterized protein;[Frankia alni] Length = 581 Score = 348 bits (893), Expect = 2e-93 Identities = 219/569 (38%), Positives = 276/569 (48%), Gaps = 117/569 (20%) Query: 309 KYRSMRNASKTPEP---------------VPRA--RPVV--------------GQGNTFV 337 +YRS R++ +TPEP PR+ RP G+G+ FV Sbjct: 18 EYRSRRHSGRTPEPDVSPLADAGDDGGRRTPRSQERPTSPAPPPPDHTGDDQNGRGDRFV 77 Query: 338 IQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKG 397 I EHHARRLH+D RLERDGVLVSWAVP+ LP + NHLAV TEDHPL YA F G IPKG Sbjct: 78 IHEHHARRLHWDVRLERDGVLVSWAVPRGLPTDSRRNHLAVRTEDHPLAYADFAGTIPKG 137 Query: 398 EYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGEVIVNLHGSRISGRYALIQT--------- 448 EYGAG+V +WD G Y E + + +V V L G R+ GRYA T Sbjct: 138 EYGAGEVSVWDRGRYRLESWSAE--------KVKVTLLGERVQGRYAFFATGRAHGGGTG 189 Query: 449 ------NGDQ-WLAHRMKDQTAFDFDTLAPMLTSHGSVAGL------------------- 482 GD+ W+ HRM + D P T AG Sbjct: 190 SDQRSDRGDRNWMVHRMDPRGDTDPGGTDPDGTGQPRRAGRPARTDPARSPDLPGGTESR 249 Query: 483 ------------------------------ESGQWAFEGKWDGYRLLVEADHGALRLRSR 512 E WA+E KWDG R L D G RLRSR Sbjct: 250 DSMDPPGDPERTPMPGRMAPMLAVPAAAPPEGDDWAYEVKWDGVRALAFVDGGRPRLRSR 309 Query: 513 SGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFNEMQNRVRATR-------- 564 SG DVT +P+L +L V+LDGE+VA +G P F + +RV Sbjct: 310 SGHDVTDVFPELHTLGPAFGATQVILDGEIVAFGPAGTPDFELLSHRVHIATPAIARRAA 369 Query: 565 ----IEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPELLPGDGAEALAYSHK 620 + + FDLLFLDG L G L + E L G G E +A S Sbjct: 370 ATIPVRYLVFDLLFLDGHSLLAWPYSGRRALLADLADRGRLRISEELVGTGDEVVAASAA 429 Query: 621 RGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIPG 680 G EGV+AKRR S YQPGRRS W+K +H Q V++GGW G G R+ IG+LL+G+ Sbjct: 430 AGLEGVVAKRRSSPYQPGRRSVDWVKVRHVRRQSVLVGGWEPGTGRRADRIGALLVGVAT 489 Query: 681 PSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVR 740 P+G +AG+VGTGF+E L L LAPL + P +PA A+G +V P L+ EV Sbjct: 490 PAGPRYAGQVGTGFSEATLDRLAALLAPLRRSDPPL-RDVPAEVARGAVWVDPELIAEVE 548 Query: 741 YSEWTPDDRLRQSSWRGLRPDKNPSEVVR 769 ++ WT D RLR S++GLR D +P++ R Sbjct: 549 FTSWTTDGRLRHPSFQGLRIDISPADTAR 577 >tr|Q09E36|Q09E36_STIAU Tax_Id=378806 (ligD)SubName: Full=DNA ligase D;[Stigmatella aurantiaca DW4/3-1] Length = 836 Score = 292 bits (748), Expect = 1e-76 Identities = 194/509 (38%), Positives = 251/509 (49%), Gaps = 54/509 (10%) Query: 310 YRSMRNASKTPEPVPRARPVVGQGNT--FVIQEHHARRLHYDFRLERDGVLVSWAVPKNL 367 YR+ R+ KT EP P A+ +G FV+ +H A RLHYD RLE DG L SWA+PK Sbjct: 10 YRAKRDFQKTSEPAPEAKAPRRRGAPPLFVVHKHDATRLHYDLRLEIDGALASWALPKGP 69 Query: 368 PETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEK 427 LAV TEDHPL YA FEG IP+GEYG G ++WD GTY+T ++ +K Sbjct: 70 SFDPKTKRLAVETEDHPLAYAGFEGRIPEGEYGGGDSLLWDRGTYETVP-PGEAPEQRKK 128 Query: 428 GEVIVNLHGSRISGRYALIQTNGD----QWLAHRMKDQTA-FDFDTLA------------ 470 G + V LHG ++ GR+ LI+T QWL + D A D+D A Sbjct: 129 GHLTVQLHGEKLKGRWHLIRTKSRGKKAQWLCFKAMDGEADADYDVTADRPESVKSGRSA 188 Query: 471 --------------------------PMLTSHGSVAGLESGQWAFEGKWDGYRLLVEADH 504 PML + +E K+DG+R L Sbjct: 189 TRGPVRKGALKSRPLPAEQLLERVWPPMLAQLSVPTEADDATHLYEVKYDGFRALAALSS 248 Query: 505 GALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFNEMQNRVRATR 564 GAL L SR+G D++ +PQL L VLDGE++ALD G F +Q A + Sbjct: 249 GALTLHSRNGHDLSGRFPQLAEALRQLRVTEAVLDGEIIALDPQGRSRFQLLQKGSDAEQ 308 Query: 565 IEFWAFDLLFLDGXXXXXXXXXXXXXXXETL--GSAGNLIVPELLPGDGAEALAYSHKRG 622 F AFDLL+LDG E L G L + E L G EALA + +G Sbjct: 309 -RFVAFDLLWLDGEDLRPRPLEARRELLEQLLSGVKPPLQLSERLDLPGDEALAKARSQG 367 Query: 623 WEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRS-SGIGSLLMGIPGP 681 WEG+IAKRR + Y G RS W+K K QE VI G+ + R+ IG+LL+G+ GP Sbjct: 368 WEGLIAKRRGAPY-VGSRSRDWLKLKVQAAQETVILGYLPIQNARAREEIGALLVGVHGP 426 Query: 682 SGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRY 741 G H G+VGTGF+ L+ A L A+ A+ G +V P V +V + Sbjct: 427 DGYHDVGKVGTGFSSETRRELR---ALLDRQRVRAPVAVDAKPRPGAVWVKPKYVAQVHF 483 Query: 742 SEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 +EWT D RLR ++GLR DK P EVVRE Sbjct: 484 TEWTHDGRLRHPVFQGLRTDKKPQEVVRE 512 Score = 170 bits (430), Expect = 8e-40 Identities = 98/262 (37%), Positives = 142/262 (54%), Gaps = 13/262 (4%) Query: 9 PGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQ 68 P +A G + LT+ D+VLYP TK DVF YY A +++P +A RP ++WP G+ Sbjct: 552 PAEAEG-RARLTHGDRVLYPQERLTKQDVFAYYREAAPLLLPVLANRPLAVQQWPAGIQA 610 Query: 69 ASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAE 128 FF +L S P WLP V H + T + + S L W+A Q+AL +H+ Sbjct: 611 PGFFRHEL-SGMPAWLPTLRVKHEAKTLAHVNVQSLEALLWLANQSALTLHI-------- 661 Query: 129 WTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLH 188 W+S L +VFDLDPG+G + VA+A+R+ L +GL +LP TSG +GLH Sbjct: 662 WSSHAPKL--AQPDWVVFDLDPGKG-PWEDVITVAQALREKLEALGLESLPKTSGKRGLH 718 Query: 189 LYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTI 248 + PL + A+++A +LET + +L T T R G+++LD QN KT + Sbjct: 719 VLIPLAPGHTYAQTQRFAEKIAAELETELGSLATTERTIQKRRGRLYLDVGQNGRGKTVV 778 Query: 249 APYSLRGREQPTVAAPRSWEEL 270 APYSLR +AP +W E+ Sbjct: 779 APYSLRAIPGAPFSAPLAWSEV 800 >tr|A9BWY5|A9BWY5_DELAS Tax_Id=398578 SubName: Full=DNA ligase D;[Delftia acidovorans] Length = 871 Score = 284 bits (727), Expect = 3e-74 Identities = 191/518 (36%), Positives = 265/518 (51%), Gaps = 64/518 (12%) Query: 310 YRSMRNASKTPEPV--PRARPVVGQGNT----FVIQEHHARRLHYDFRLERDGVLVSWAV 363 YR R+ ++TPEP P + + GQ FVIQ+H A LHYDFRLE DG + SWAV Sbjct: 33 YRQKRDFTRTPEPSAEPSSETIAGQPGAGALQFVIQKHWASHLHYDFRLELDGSMKSWAV 92 Query: 364 PKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRN 423 PK + +AV EDHP+ Y FEG IP G+YGAGKVIIWD GT+ E D+ Sbjct: 93 PKGPSYDPADKRMAVQVEDHPMAYNRFEGQIPPGQYGAGKVIIWDCGTWLPE---GDAAE 149 Query: 424 GSEKGEVIVNLHGSRISGRYALIQTNGDQ------WLA---HRMKDQTAFDFD------- 467 G KG++ L G ++ GR+ L++ G WL H ++ A +F+ Sbjct: 150 GYRKGKLKFELRGHKLQGRWTLVRMRGKDDAKKPAWLLIKEHDGLERAASEFNVVEDMPD 209 Query: 468 ----------------------------TLAPMLTSHGSVAGLESGQWAFEGKWDGYRLL 499 ++AP L + A ++GQW FE K+DGYRLL Sbjct: 210 SVAGLPLPTATAPVTTPVATPVTAPMPQSIAPQLATLVDHAPADAGQWIFESKFDGYRLL 269 Query: 500 VEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFNEMQNR 559 + GA+RL +R+G+D T + P L A L +DGE++ LDS P F +QN Sbjct: 270 ARIEDGAVRLFTRNGKDWTTKMPALAHTFAALPLQSGWVDGEVLMLDSDSRPDFQALQNA 329 Query: 560 V---RATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETL---GSAGNLIVPELLPGDGAE 613 R + F+AFDLL+ DG + L + L E A+ Sbjct: 330 FDGERTDHLVFFAFDLLWHDGQDLRPQPVEQRRQQLQALLHKAPSDRLRFSEAFDAPPAD 389 Query: 614 ALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGS 673 +A + + G EGVI KRR S Y RRS+ WIK K QE VI G+ +G R +G+G+ Sbjct: 390 LVAAACQLGLEGVIGKRRGSAY-ASRRSADWIKLKCGLRQEFVIAGYTDPQGTR-TGLGA 447 Query: 674 LLMGIPGPSG-LHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVA 732 L++ + G G L AG+VGTGF R LA+L++ L L T SP A GV +V Sbjct: 448 LVLAVHGEDGQLRAAGKVGTGFNRRTLADLRQRLERLATGTSPL--ADSRGLGSGVHWVR 505 Query: 733 PTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 PTL+ EV +++WT D ++R + ++GLR DK +V+E Sbjct: 506 PTLLAEVSFAQWTEDGQVRHAVFQGLRADKPARSIVKE 543 Score = 124 bits (311), Expect = 5e-26 Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 10/255 (3%) Query: 17 VTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFFEKQL 76 +T+T+ ++V+ P+TG TK D+ YY +A MI H+ RP R P+G++ FF+K L Sbjct: 580 MTITHPERVIDPSTGITKMDLARYYATVAPFMITHLKSRPVAMVRAPDGIEGELFFQKHL 639 Query: 77 ASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSKGEIL 136 + + + G + GL AQ +E H W ++ + + Sbjct: 640 DQAPLQGIAALTPELDPGHAPLMEVSRREGLVAAAQMNTIEWHT--------WNARKDRI 691 Query: 137 TPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTPLDEP 196 R+ FDLDPGEGV Q+ + A + LL ++ L TSG KGLH+ P+ Sbjct: 692 DR--PDRMTFDLDPGEGVPWQQVQEAASLLHVLLQELELPAFLKTSGGKGLHVVVPIKRL 749 Query: 197 VSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYSLRGR 256 + ++ V Q L +P A R GK+F+D+ +N TT ++ R R Sbjct: 750 LDWDTVKAFSQAVVQHLAHAVPQRFVAKSGPRNRVGKIFVDYLRNGFGATTACAWTARAR 809 Query: 257 EQPTVAAPRSWEELD 271 ++ P +W ELD Sbjct: 810 PGMGISVPVAWNELD 824 >tr|Q7WIK6|Q7WIK6_BORBR Tax_Id=518 SubName: Full=Putative ATP-dependent DNA-ligase;[Bordetella bronchiseptica] Length = 820 Score = 283 bits (725), Expect = 5e-74 Identities = 198/506 (39%), Positives = 252/506 (49%), Gaps = 52/506 (10%) Query: 309 KYRSMRNASKTPEPV-----PRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAV 363 +YR R+ T EP PRA +G +FVIQ H ARRLHYDFRLE DGVLVSWAV Sbjct: 7 QYREKRDFRATAEPAGAARRPRAAARASEGLSFVIQRHQARRLHYDFRLEIDGVLVSWAV 66 Query: 364 PKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRN 423 PK SV LAVH EDHPLEY F G+IPKG+YGAG V IWDSG + R D R Sbjct: 67 PKGPSRDPSVKRLAVHVEDHPLEYGGFSGDIPKGQYGAGHVDIWDSGVWIP---RGDPRQ 123 Query: 424 GSEKGEVIVNLHGSRISGRYALIQTNG--DQWLAHRMKDQTAFDFDTL------------ 469 G +G++ L G R++G + L++ +G DQWL + D+ A D Sbjct: 124 GLRRGKLHFALRGRRLAGDWVLVRMSGEQDQWLLRKEDDEAAVPGDDAERAPATPPPAPE 183 Query: 470 -APMLTSHGSVAGL----------------ESGQWAFEGKWDGYRLLVEADHGALRLRSR 512 AP T G A + W++E K+DGYR+L G +RL SR Sbjct: 184 HAPAATPRGRRAAMPHTLAPQLATLVDSPPHGPGWSYEVKYDGYRILAACSAGGVRLVSR 243 Query: 513 SGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFNEMQNRV--RATRIEFWAF 570 D A L L LDGE+V LD GV F +QN + +A + F AF Sbjct: 244 GNEDWQARMAPLARALGALKLGRGWLDGEVVVLDERGVADFQLLQNALDGQAEGLVFVAF 303 Query: 571 DLLFLDGXXXXXXXXXXXXXXXETL----GSAGNLIVPELLP----GDGAEALAYSHKRG 622 DL F +G E L L++ + LP +G A + + Sbjct: 304 DLPFWNGEDLRALPLQARQERLEDLLREVPEDAPLMLTQRLPVADDTEGKAAWNEACRLS 363 Query: 623 WEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPS 682 EG+I KR D+ Y+ G RS W+K K QE VIGG+ G R +G+LL+G+ Sbjct: 364 LEGLICKRLDAPYRSG-RSQGWLKLKCRPRQEFVIGGYTEPAGARRH-LGALLVGLRQGR 421 Query: 683 GLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALP-AREAKGVTFVAPTLVGEVRY 741 L +AGRVGTGF L L + LA L D PF +P R + +V+P LV EV Y Sbjct: 422 QLRYAGRVGTGFGAATLRTLGQRLAALRQDAKPFSGDVPRGRGDAAIHWVSPELVAEVNY 481 Query: 742 SEWTPDDRLRQSSWRGLRPDKNPSEV 767 + T D LRQ+S+ GLR DK SEV Sbjct: 482 AGITRDGLLRQASFAGLRADKPASEV 507 Score = 129 bits (323), Expect = 2e-27 Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 18/262 (6%) Query: 10 GQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQA 69 G+A V +++ D++ Y TK + YY I ++PH+ R R P+G Sbjct: 530 GRAEVAGVRISHPDRLAYREPDYTKLQLAEYYAAIGPHILPHLRQRRVALLRCPDGAGTT 589 Query: 70 SFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW 129 FF+K L+ S P + V R G + +I+S GL + Q A+E H Sbjct: 590 CFFQKHLSQSLP------AGVRRDGG--HLVIESLPGLIALVQYGAIEFH---------- 631 Query: 130 TSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHL 189 T + P R+ DLDPG GV + + A+ R L+ ++GL T+G KGLHL Sbjct: 632 TWGADTRHPDTPDRITLDLDPGPGVAWPAIVEGAQMARLLMQEVGLEPFLKTTGGKGLHL 691 Query: 190 YTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIA 249 PL A+ +A+QL +P TA M K+ R ++F+D+ +N T +A Sbjct: 692 VAPLRPTQPWDTVKDFARALARQLAVALPDRFTANMAKARRERRIFVDYLRNGNGATAVA 751 Query: 250 PYSLRGREQPTVAAPRSWEELD 271 +S R R+ V+ P SW+ LD Sbjct: 752 AFSARARDGAPVSMPLSWDALD 773 >tr|A1SG16|A1SG16_NOCSJ Tax_Id=196162 SubName: Full=ATP dependent DNA ligase;[Nocardioides sp.] Length = 304 Score = 271 bits (692), Expect = 3e-70 Identities = 146/289 (50%), Positives = 186/289 (64%), Gaps = 19/289 (6%) Query: 11 QANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQAS 70 Q +G +T++N KVLYP TGTTK +V YY +A ++PH+AGR TR RWP+GV + S Sbjct: 12 QVDGRTLTISNLYKVLYPRTGTTKGEVLNYYAQVAPTLLPHLAGRCVTRIRWPHGVHEGS 71 Query: 71 FFEKQLASSAPDWLPRASVV-------HRSGTTTYPIIDSATGLAWIAQQAALEVHVPQW 123 FFEK + P W+ A V S T +PII+ L W+ AALE+HV QW Sbjct: 72 FFEKNAPAGTPSWVRTAEVPTTGSRAQSSSDTLVFPIIEDLATLTWLVNLAALELHVHQW 131 Query: 124 RFVAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSG 183 +G A R+V DLDPGE + + +VA VRD LA+ GL+ P+TSG Sbjct: 132 TVDRSGRPRG-------ADRVVVDLDPGEPAGLHECCRVALMVRDRLAERGLAAKPVTSG 184 Query: 184 SKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSG 243 SKGLHLY L E V S+ ++ LAK VA++L+ PALVTATMTK+ RAGKVFLDWSQN+G Sbjct: 185 SKGLHLYADLPERVPSEDSSALAKAVAEELQGEHPALVTATMTKARRAGKVFLDWSQNAG 244 Query: 244 SKTTIAPYSLRGREQPTVAAPRSWEELD----DP-GLRQLTYDEVLARL 287 SKTT++PYSLRGRE PTVA P +W E++ DP LRQ +DEVL R+ Sbjct: 245 SKTTVSPYSLRGRELPTVATPLAWAEVEAGAQDPMALRQFRFDEVLERV 293 >tr|A0LY41|A0LY41_GRAFK Tax_Id=411154 SubName: Full=ATP-dependent DNA ligase family protein;[Gramella forsetii] Length = 802 Score = 268 bits (686), Expect = 2e-69 Identities = 170/491 (34%), Positives = 243/491 (49%), Gaps = 44/491 (8%) Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 Y R+ TPEP A+ FV+Q H A RLHYD RLE DGVL SWAVPK Sbjct: 6 YIRKRDFRNTPEP--EAKISKANKQRFVVQRHQASRLHYDLRLEIDGVLKSWAVPKGPSM 63 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 LA+HTEDHP++Y F G IPKG YGAG++ IWDSG +++ D S G Sbjct: 64 NPRDKRLAIHTEDHPIKYLEFHGTIPKGNYGAGEMKIWDSGIFESASSMDLLEQLS-SGN 122 Query: 430 VIVNLHGSRISGRYALIQTN----GDQWLAHRMKDQTAFDF------------------- 466 + + G ++ G +AL++TN +QWL + D + D Sbjct: 123 LKIRFSGKKLKGEFALVRTNRGEERNQWLLIKKSDNYSTDLNYDAEDLIERSDPKPGKLI 182 Query: 467 -----DTLAPMLTSHGSVAGLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEY 521 D + PML + + W +E KWDGYRL+ + G + L SR+G +++ Sbjct: 183 ELNFKDPVKPMLAT-STKEIFNDPDWIYELKWDGYRLIAHVNDGKVNLHSRNGISYNSKF 241 Query: 522 PQLRSLAADL--ADHHVVLDGELVALDSSGVPSFNEMQNRVRATR--IEFWAFDLLFLDG 577 P+ L DL H +LDGE+V +D G+PSF ++QN T ++F+ FD+L+L+G Sbjct: 242 PE---LVKDLKTISHEAILDGEVVVVDEDGLPSFEKLQNYDTKTEGALKFYVFDMLYLNG 298 Query: 578 -XXXXXXXXXXXXXXXETLGSAGNLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQ 636 E L I + + G G + G EGVIAK+ DS Y Sbjct: 299 HSTLNLKLLERKSFIPEILEETQLAIFCDHIEGMGTAFYQKAISTGMEGVIAKKADSTYS 358 Query: 637 PGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTE 696 PG R+ W+K K + E +I G+ EG GSL++GI L + G GTGF+ Sbjct: 359 PGYRTEQWLKVKAEESLETLICGYTDSEGAL---FGSLILGIIKDGTLSYIGNCGTGFSN 415 Query: 697 RDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWR 756 + A L + + D +PF+ P + + +V P LV EV +SEWT R+R ++ Sbjct: 416 KTQAELLRKMEEREIDTNPFEKK-PNLKGRKANWVRPELVCEVTFSEWTKAGRMRHPVFK 474 Query: 757 GLRPDKNPSEV 767 GLR DK+ ++ Sbjct: 475 GLREDKSSGDL 485 Score = 125 bits (314), Expect = 2e-26 Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 15/281 (5%) Query: 11 QANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQAS 70 + +G +V TN DK+ +P +G K D+ YY ++E ++P++ RP R PNG+ + Sbjct: 506 EIDGKEVKFTNLDKIYWPESGLRKYDLIDYYLQVSEYILPYLRDRPQNLHRHPNGIHKKG 565 Query: 71 FFEKQLASSAPDWLPRASVVHRSGTTT--YPIIDSATGLAWIAQQAALEVHVPQWRFVAE 128 F++K DW+ + +S Y + L ++A +E++ Sbjct: 566 FYQKDNEGLIEDWVETTRIYSKSTNRDIEYLLCQDEATLLYMANLGCIEIN--------P 617 Query: 129 WTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLH 188 W S+ + L T V DLDP + + ++ +VA R++LA ++ TSGS GLH Sbjct: 618 WNSRIDHLDRPDYT--VIDLDPSDKNSFDEVIEVALIAREILASAKINAYLKTSGSSGLH 675 Query: 189 LYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTI 248 +Y P++ S A K + ++ L + R K++LD+ QN +T Sbjct: 676 IYLPINAEYSYDEARDFTKLLCYFIQEKTSGLTSMDRAVKNRKDKIYLDYLQNRRGQTLA 735 Query: 249 APYSLRGREQPTVAAPRSWEELDDPGLRQLTYD--EVLARL 287 + Y +R +E V+AP WEEL GL+ ++ +LARL Sbjct: 736 SAYCVRPKEGAPVSAPLEWEEL-KKGLKITDFNIKNMLARL 775 >tr|C0UAZ9|C0UAZ9_9ACTO Tax_Id=526225 SubName: Full=DNA polymerase LigD-like ligase domain-containing protein;[Geodermatophilus obscurus DSM 43160] Length = 436 Score = 266 bits (679), Expect = 1e-68 Identities = 177/458 (38%), Positives = 228/458 (49%), Gaps = 45/458 (9%) Query: 327 RPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLE 386 RP G FV+ EH + + RLER+GV W +P+ P AV T Sbjct: 9 RPTPPAGEPFVVTEHPSSGA--ELRLERNGVPCCWDLPEGPPAARGRALPAVPT------ 60 Query: 387 YATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGEVIVNLHGSRISGRYALI 446 G G G + WD+G Y E++ DD V+V L G R+ GR+ L Sbjct: 61 ---------MGGDGGG-LPTWDAGRYAVEQWTDD--------RVVVVLAGRRLRGRHVLF 102 Query: 447 QTNGDQWLAHRMKDQTAFDFDTLAPMLTSHGSVA-GLESGQWAFEGKWDGYRLLVEADHG 505 ++ W R D A + L PML + G + + W +E KWDG R L + G Sbjct: 103 RSPDGGWSV-RALDAPA-EGAPLVPMLATAGELPPSAQDHDWGYEFKWDGVRALAVVEAG 160 Query: 506 ALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFNEMQNRVR---- 561 L L +RSG D+T YP+L SL L H V+DGE+VALD+ G P F +Q R+ Sbjct: 161 GLALWARSGTDITVRYPEL-SLPTALTGHDAVVDGEVVALDARGRPDFGALQGRMHRTGP 219 Query: 562 -------ATRIEFWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIVPE-LLPGDGAE 613 T + + FDLL +G E LG AG VP G GA Sbjct: 220 EVRRMAATTPVTYLVFDLLAWEGESLLALPYAQRRERLEALGVAGERWVPTPWFRGGGAA 279 Query: 614 ALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSGIGS 673 LA S G EG++AKR DS Y+PG R W K K+ TQ VV+GGWR G+G R+ G+GS Sbjct: 280 VLAASRDNGLEGIVAKRLDSPYRPGLRGPDWRKVKNVRTQAVVVGGWRPGQGRRAGGVGS 339 Query: 674 LLMGIPGPSG-LHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVTFVA 732 LL+G+ +G L +AG VGTGFT LA L+ P H PF ALP + +VA Sbjct: 340 LLVGVHDDAGRLVYAGHVGTGFTAAALAELQPLFTPAH--RPPFADALPREVTRDARWVA 397 Query: 733 PTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 P LVGEV ++ WT D R+R SWRGLR D P +VV E Sbjct: 398 PELVGEVAFAAWTADGRMRHPSWRGLRDDLAPEDVVEE 435 >tr|C4RAY3|C4RAY3_9ACTO Tax_Id=219305 SubName: Full=ATP-dependent DNA ligase;[Micromonospora sp. ATCC 39149] Length = 349 Score = 265 bits (676), Expect = 2e-68 Identities = 154/355 (43%), Positives = 196/355 (55%), Gaps = 35/355 (9%) Query: 309 KYRSMRNASKTPEPVPRARPVVGQGN----TFVIQEHHARRLHYDFRLERDGVLVSWAVP 364 +YR R+A +TPEPVP+ P G+G+ FVIQ+HHARRLH+D RLE +GVL SWAVP Sbjct: 7 EYRRRRDAKRTPEPVPQRPPRRGRGDGRGARFVIQQHHARRLHWDLRLEHEGVLASWAVP 66 Query: 365 KNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNG 424 + LP NHLAVHTEDHP+EY F G IP GEYG GK+II D+GTY EK+RDD Sbjct: 67 RGLPREPGRNHLAVHTEDHPMEYLDFHGEIPAGEYGGGKMIIHDAGTYRCEKWRDD---- 122 Query: 425 SEKGEVIVNLHGSRISGRYALIQTNGDQWLAHRMKDQT---AFDFDTLAPMLTSHGSVAG 481 EV+V L G R +GRY L T G W+ R + + + PM + + Sbjct: 123 ----EVVVVLDGRRTAGRYVLFATGGRDWMVRRTDPAPPGWSSMPELVRPMRPTRAAGLP 178 Query: 482 LESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGE 541 ++ W +E +WDG R + G LRL + SG DVT YP LR LA +LA VLDG Sbjct: 179 RDAADWGYEPRWDGLRAVAYVSGGRLRLLADSGEDVTGAYPWLRELAEELAPTEAVLDGV 238 Query: 542 LVALDSSGVPSFNEMQNRVRATRI----------EFWAFDLLFLDGXXXXXXXXXXXXXX 591 LV +D G RVR R ++ DLL+L+G Sbjct: 239 LVDIDRRG---------RVRPARPGGGRRSDPVGQYLLVDLLWLEGAPSTDLPYARRREL 289 Query: 592 XETLGSAG-NLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWI 645 + L AG + P PG GAEAL + ++G GV+AKR DS Y+PGRRS W+ Sbjct: 290 LDGLALAGPHWQTPPWFPGTGAEALRAAREQGLPGVVAKRLDSVYEPGRRSRRWL 344 >tr|A1W8V8|A1W8V8_ACISJ Tax_Id=232721 SubName: Full=DNA ligase (ATP); EC=6.5.1.1;[Acidovorax sp.] Length = 837 Score = 262 bits (670), Expect = 1e-67 Identities = 187/528 (35%), Positives = 257/528 (48%), Gaps = 77/528 (14%) Query: 310 YRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPE 369 Y+ RN + TPEP Q +VIQ+H A RLHYD RLE DG + SWAVPK Sbjct: 10 YKQKRNFAVTPEPADGGAQ--SQALQYVIQKHWASRLHYDLRLELDGTMKSWAVPKGPSY 67 Query: 370 TTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEKGE 429 + +AV EDHP+ Y FEG IP +YGAG+VIIWD G + + + R KG+ Sbjct: 68 DPADKRMAVQVEDHPISYNQFEGQIPPRQYGAGRVIIWDRGYWVPQ---GNPREDYRKGK 124 Query: 430 VIVNLHGSRISGRYALIQTNG------DQWL-----------------AHRMKDQTAFDF 466 + +HG ++ G + L++ +G WL M D A D Sbjct: 125 LKFEIHGHKLHGHWTLVRMHGRDDDKQPPWLLIKECDGLERAAEEFNVVDEMPDSVA-DQ 183 Query: 467 DTLAPMLTSHGSVAG-------------------------------LESGQWAFEGKW-- 493 +AP + AG L G A +W Sbjct: 184 PPVAPPARAFAQRAGPAQIQPTAAAVPWTSAPTAPLPDQLSPQLATLVDGPPADLTQWLW 243 Query: 494 ----DGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSG 549 DGYR+L G RL +R+G D TA P L A L +DGE++ LD+ G Sbjct: 244 ELKFDGYRMLARVQRGKARLYTRNGNDWTARMPALAQALAALPLSSAWIDGEVLVLDAQG 303 Query: 550 VPSFNEMQNRV--RAT-RIEFWAFDLLFLDGXXXXXXXXXXXXXXXETL---GSAGNLIV 603 VP F +QN R+T + F+AFDL + G ++ S+ + Sbjct: 304 VPDFQALQNAFDGRSTDALVFYAFDLPYAHGRDLRQMPLAERRALLRSVLQPASSDRVRF 363 Query: 604 PELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVG 663 E A+ +A + + G+EGVI KR+DS Y RRS+ WIK K + QE VIGG+ Sbjct: 364 SEAFEARPADLVASACRLGFEGVIGKRKDSVY-ASRRSTDWIKLKCSHRQEFVIGGYTDP 422 Query: 664 EGGRSSGIGSLLMGIPGPSG-LHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPA 722 +G R +GIGSLL+G+ G L +AG VGTGF+ER LA+L + L L T +SPF A P Sbjct: 423 QGSR-TGIGSLLLGVHDEGGALRYAGNVGTGFSERVLADLARRLGALRTQDSPF--AQPR 479 Query: 723 REAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 + V +V PTLV EV ++EWT + ++R + +RGLR DK + +V E Sbjct: 480 SIPRKVHWVRPTLVAEVSFAEWTKEGKVRHAVFRGLRDDKPAAAIVHE 527 Score = 135 bits (339), Expect = 3e-29 Identities = 88/267 (32%), Positives = 130/267 (48%), Gaps = 12/267 (4%) Query: 6 AWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNG 65 A P A + +T+ +V+ P+TG TK D+ YY +A +M+PH+ GRP + R P G Sbjct: 535 AAPSRAARVGGLQVTSPARVVDPSTGFTKLDLVRYYATVAPLMLPHLQGRPVSLLRAPQG 594 Query: 66 VDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRF 125 ++ FF+K L + A D + S G + +A GL AQ +E H Sbjct: 595 LEGELFFQKHLDTGALDGVSALSPDLDPGHPPLLEVATAQGLLSAAQMNTVEFHT----- 649 Query: 126 VAEWTS-KGEILTPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGS 184 W + K I P R+ FDLDPGEGV A + + A VR +L ++GL + TSG Sbjct: 650 ---WNARKDRIERPN---RITFDLDPGEGVPWAHVQEGAALVRLMLTELGLPSFLKTSGG 703 Query: 185 KGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGS 244 KGLH+ P+ ++ V Q L +P A R GK+F+D+ +N Sbjct: 704 KGLHVVVPIKRLHGWDAVKDFSQAVVQHLARTLPQRFVAKSGPRNRVGKIFVDYLRNGFG 763 Query: 245 KTTIAPYSLRGREQPTVAAPRSWEELD 271 TT ++ R R V+ P +W+ELD Sbjct: 764 ATTACAWTARARPGMGVSVPVAWQELD 790 >tr|Q87ZG5|Q87ZG5_PSESM Tax_Id=323 SubName: Full=DNA ligase, ATP-dependent, putative;[Pseudomonas syringae pv. tomato] Length = 851 Score = 261 bits (667), Expect = 3e-67 Identities = 188/526 (35%), Positives = 256/526 (48%), Gaps = 68/526 (12%) Query: 309 KYRSMRNASKTPEPVPRARPVVGQGN--TFVIQEHHARRLHYDFRLERDGVLVSWAVPKN 366 +Y RN T EP+ R + +FVIQ+H AR LHYDFRLE DG L SWAVPK Sbjct: 7 EYTRKRNFDVTSEPLESKRKGKARSGALSFVIQKHDARNLHYDFRLELDGTLKSWAVPKG 66 Query: 367 LPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSG----------TYDTEK 416 LAVH EDHPL+YA FEG+IPKG+YG G VI+WD G TY+ K Sbjct: 67 PSLDPKQKRLAVHVEDHPLDYAAFEGSIPKGQYGGGDVIVWDRGIWQPHGDPRKTYEDGK 126 Query: 417 FRDDSRNGSEKGE---VIVNLHGSRISGRYALIQT----------------------NGD 451 + GE V L GS ++ LI+ +G Sbjct: 127 LKFTLIGEKLSGEWALVRTRLKGSGSKEQWLLIKEKDDIARPAAEYDITEAQPQSVISGA 186 Query: 452 QWLAHRM--------------------KDQTAFDFDTLAPMLTSHGSVAGLESGQWAFEG 491 A R K A DT AP L + V +G W +E Sbjct: 187 HVGAGRSAPAKPKAKAVEAKPARKPAPKKAKAVFPDTFAPQLAT--LVDAPPAGDWLYEI 244 Query: 492 KWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVP 551 K+DGYR+L + +RL +R+G D T + P+L L DGE+V LD G+P Sbjct: 245 KFDGYRMLTRIQNDEVRLFTRNGNDWTDQLPELTKALKGLKLQDSWFDGEVVVLDEQGLP 304 Query: 552 SFNEMQNRV---RATRIEFWAFDLLFLDGXXXXXXXXXXXXXXX-ETLGSAGNLIV--PE 605 F +QN + I ++ FD+ FL G + LGS + ++ + Sbjct: 305 DFQGLQNAFDEGHSKNIFYYLFDMPFLSGEDLREVPLEQRRDALKQVLGSQRSRLLRYSD 364 Query: 606 LLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEG 665 + +A + G EGVI KR S Y G+R++ WIK K QE VI G+ +G Sbjct: 365 AFQAGHQDIVASAAAMGLEGVIGKRAGSAYV-GKRNADWIKLKCRLRQEFVIVGYTAPQG 423 Query: 666 GRSSGIGSLLMGIPGPS-GLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPARE 724 RS+ G+LL+ + + GL +AGRVGTGFTE L ++ K L PLH +ESP L + + Sbjct: 424 SRSA-FGALLLAVNDDAQGLVYAGRVGTGFTEATLKHVHKQLKPLHREESPLAKKLTSAQ 482 Query: 725 AKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 A+GV +V PTLV E +++WT + +RQ+++ GLR DK +VVRE Sbjct: 483 ARGVQWVEPTLVCEAEFAQWTREGIVRQAAFFGLRGDKPAGDVVRE 528 Score = 117 bits (292), Expect = 8e-24 Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 12/253 (4%) Query: 19 LTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFFEKQLAS 78 +++ +V+ TGT K ++ +Y IA+ ++P++ RP R P G+D FF+K Sbjct: 562 ISHPQRVIDSTTGTKKIELAQFYESIADWILPYLNKRPVALLRCPEGIDGEQFFQKHAEH 621 Query: 79 SAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEW-TSKGEILT 137 A + + G IDS L AQ A+E+H W ++ I T Sbjct: 622 LAIPHIRQLDRALDPGHAALMEIDSVQALVGAAQMGAIELHT--------WGATRDRIET 673 Query: 138 PGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTPLDEPV 197 P V DLDP + + + + V +L ++GL TSG KG+H+ PL Sbjct: 674 PD---HFVLDLDPDPALPWRSMIEATQMVLAVLEELGLEAFLKTSGGKGMHIIVPLARQA 730 Query: 198 SSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYSLRGRE 257 AK +A+ + +P TATM R GK+F+D+ +NS +T+ YS+R R Sbjct: 731 EWDTVKAFAKAIAEFISRQLPERFTATMGPKNRVGKIFIDYLRNSRGGSTVTAYSVRARP 790 Query: 258 QPTVAAPRSWEEL 270 V+ P + EL Sbjct: 791 GLPVSVPIALHEL 803 >tr|Q46SV9|Q46SV9_RALEJ Tax_Id=264198 SubName: Full=ATP dependent DNA ligase, C-terminal:ATP dependent DNA ligase, central;[Ralstonia eutropha] Length = 930 Score = 254 bits (649), Expect = 3e-65 Identities = 182/526 (34%), Positives = 255/526 (48%), Gaps = 72/526 (13%) Query: 309 KYRSMRNASKTPEPVPRARPVVGQGNT-FVIQEHHARRLHYDFRLERDGVLVSWAVPKNL 367 +YR R+ T EP PR R G FV+Q+H ARRLHYDFRLE DGVL+SWAVPK Sbjct: 113 RYREKRDFRVTAEPGPRTRAPRAPGPLRFVVQKHWARRLHYDFRLELDGVLLSWAVPKGP 172 Query: 368 PETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTYDTEKFRDDSRNGSEK 427 + +A+H EDHP++YA FEG IP +YGAG VI+WD+GT++ D++ G K Sbjct: 173 SFDPAEKRIAIHVEDHPVDYAAFEGTIPPKQYGAGSVIVWDNGTWEPV---GDAQAGMAK 229 Query: 428 GEVIVNLHGSRISGRYALIQTN-----GDQWLAHRMKDQTA-----FDFDT--------- 468 G++ LHG +++GR+ L++ + DQW+ + +D+ A FD T Sbjct: 230 GKLEFALHGQKLAGRWELVRISKPGDADDQWMLFKKRDRWARPHAEFDVITALPDSVVAH 289 Query: 469 --------------------------------LAPMLTSHGSVAGLESGQ-WAFEGKWDG 495 LAP L + A L SG W E K+DG Sbjct: 290 PLGQVEERESSSASPSGTPDLSAAVRAPPPPRLAPQLAT--PTAKLPSGSGWIIETKFDG 347 Query: 496 YRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLADHHVVLDGELVALDSSGVPSFNE 555 YRLL + L +R+G D T + L L LDGE+V L G+P FN Sbjct: 348 YRLLSRIVDARVHLITRNGHDWTRKLGGLAKEVEKLDISEGWLDGEIVVL-RDGLPDFNA 406 Query: 556 MQNRVRATRIE---FWAFDLLFLDGXXXXXXXXXXXXXXXETLGSAGNLIV--PELLPGD 610 +QN + + R E ++ FD+ + +G L A + V E Sbjct: 407 LQNAIDSHRTESIVYFLFDIPYWEGRDLRRVPLRERRAHLARLVDARSERVRFSESFEAP 466 Query: 611 GAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNTQEVVIGGWRVGEGGRSSG 670 + + + G EGV+ KR DS Y R + W+K K QE VI G+ EG Sbjct: 467 ADQVFQAASQLGLEGVMLKRADSAYSSSRNAD-WLKAKCRLRQEFVICGYGDREGAPGE- 524 Query: 671 IGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLAPLHTDESPFDAALPAREAKGVT- 729 +G L++G+ L AG VGTG+ + A L+ LA L TD +PF AA R G Sbjct: 525 VGRLMLGVYEDGQLRDAGNVGTGWDSKTAAALRTQLAKLKTDTAPFAAASKGRSRWGSNR 584 Query: 730 -----FVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE 770 +V P+LV EV ++EWTP ++RQ+S++ LR + +V RE Sbjct: 585 NSTPHWVKPSLVAEVEFAEWTPAGQVRQASFKALRSETPARDVRRE 630 Score = 132 bits (332), Expect = 2e-28 Identities = 82/254 (32%), Positives = 122/254 (48%), Gaps = 10/254 (3%) Query: 17 VTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHIAGRPATRKRWPNGVDQASFFEKQL 76 V +T+ ++V+ TG TK D+ YY +A+ ++PH+ RP R P+G+ FF+K Sbjct: 643 VKVTHPERVIDATTGITKLDLVRYYESVADWLLPHLMARPVALLRAPDGIGGELFFQKHA 702 Query: 77 ASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEWTSKGEIL 136 ++ L G + IDSA LA AQ +E+H W S L Sbjct: 703 ETTKLPGLTEQPASLWPGHSRLLTIDSAEALAGAAQLNVVELHT--------WNSTAADL 754 Query: 137 TPGPATRLVFDLDPGEGVTMAQLAQVARAVRDLLADIGLSTLPLTSGSKGLHLYTPLDEP 196 R++FDLDPGEGV+ + + A V LL ++GL+ TSG KGLH+ PL Sbjct: 755 AH--PDRVIFDLDPGEGVSWQHVQEAAILVHTLLGELGLAAWLKTSGGKGLHVVVPLVPE 812 Query: 197 VSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAGKVFLDWSQNSGSKTTIAPYSLRGR 256 + ++ L +P A R G+VF+D+ +N +TT A +S R R Sbjct: 813 LDYDAVKSFSRAAVLHLAKTLPQRFVARSGAGNRKGRVFVDYLRNGTGQTTAAAFSARAR 872 Query: 257 EQPTVAAPRSWEEL 270 V+ P SWE+L Sbjct: 873 PGMGVSMPLSWEQL 886 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.316 0.133 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 5,991,091,001 Number of extensions: 262725351 Number of successful extensions: 608917 Number of sequences better than 10.0: 1441 Number of HSP's gapped: 608234 Number of HSP's successfully gapped: 2004 Length of query: 770 Length of database: 3,846,993,858 Length adjustment: 146 Effective length of query: 624 Effective length of database: 2,200,814,220 Effective search space: 1373308073280 Effective search space used: 1373308073280 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 85 (37.4 bits)