BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_4633
         (236 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HF74|B2HF74_MYCMM Tax_Id=216594 (prrA)SubName: Full=Two-com...   384   e-105
tr|A0PKW8|A0PKW8_MYCUA Tax_Id=362242 (prrA)SubName: Full=Two com...   380   e-104
tr|C6DWJ0|C6DWJ0_MYCTK Tax_Id=478434 SubName: Full=Two component...   375   e-102
tr|C1ALN7|C1ALN7_MYCBT Tax_Id=561275 (prrA)SubName: Full=Two com...   375   e-102
tr|A5U0U2|A5U0U2_MYCTA Tax_Id=419947 (prrA)SubName: Full=Two com...   375   e-102
tr|A1KH35|A1KH35_MYCBP Tax_Id=410289 (prrA)SubName: Full=Two com...   375   e-102
tr|A5WKS5|A5WKS5_MYCTF Tax_Id=336982 SubName: Full=Two component...   375   e-102
tr|A4KFK7|A4KFK7_MYCTU Tax_Id=395095 SubName: Full=Two component...   375   e-102
tr|A2VGJ7|A2VGJ7_MYCTU Tax_Id=348776 SubName: Full=Two component...   375   e-102
tr|Q742K1|Q742K1_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   373   e-102
tr|A0QBJ2|A0QBJ2_MYCA1 Tax_Id=243243 SubName: Full=Two component...   373   e-102
sp|P0A5Z6|PRRA_MYCTU Tax_Id=1773 (prrA)RecName: Full=Transcripti...   368   e-100
sp|P0A5Z7|PRRA_MYCBO Tax_Id=1765 (prrA)RecName: Full=Transcripti...   368   e-100
sp|Q50136|PRRA_MYCLE Tax_Id=1769 (prrA)RecName: Full=Transcripti...   367   e-100
tr|B8ZSQ6|B8ZSQ6_MYCLB Tax_Id=561304 SubName: Full=Two-component...   367   e-100
tr|A1TF31|A1TF31_MYCVP Tax_Id=350058 SubName: Full=Two component...   360   5e-98
tr|Q1B3I2|Q1B3I2_MYCSS Tax_Id=164756 SubName: Full=Two component...   358   4e-97
tr|A1ULL8|A1ULL8_MYCSK Tax_Id=189918 SubName: Full=Two component...   358   4e-97
tr|A3Q618|A3Q618_MYCSJ Tax_Id=164757 SubName: Full=Two component...   356   1e-96
tr|A4T774|A4T774_MYCGI Tax_Id=350054 SubName: Full=Two component...   355   2e-96
tr|A0R407|A0R407_MYCS2 Tax_Id=246196 (prrA)SubName: Full=DNA-bin...   353   9e-96
tr|B1MJ92|B1MJ92_MYCA9 Tax_Id=561007 SubName: Full=Probable tran...   343   9e-93
tr|C0ZMN4|C0ZMN4_RHOE4 Tax_Id=234621 (prrA)SubName: Full=Two-com...   267   6e-70
tr|C3JDU5|C3JDU5_RHOER Tax_Id=596309 (prrA)SubName: Full=DNA-bin...   267   6e-70
tr|C0ZNA6|C0ZNA6_RHOE4 Tax_Id=234621 SubName: Full=Probable OmpR...   265   3e-69
tr|C3JP12|C3JP12_RHOER Tax_Id=596309 (prrA)SubName: Full=DNA-bin...   265   3e-69
tr|Q5Z232|Q5Z232_NOCFA Tax_Id=37329 SubName: Full=Putative two-c...   264   7e-69
tr|C1ATP4|C1ATP4_RHOOB Tax_Id=632772 SubName: Full=OmpR family t...   254   5e-66
tr|Q0S6Q4|Q0S6Q4_RHOSR Tax_Id=101510 SubName: Full=Response regu...   253   2e-65
tr|A0QP21|A0QP21_MYCS2 Tax_Id=246196 SubName: Full=Two component...   239   2e-61
tr|Q1BFP8|Q1BFP8_MYCSS Tax_Id=164756 SubName: Full=Two component...   238   3e-61
tr|A3PSU1|A3PSU1_MYCSJ Tax_Id=164757 SubName: Full=Two component...   238   3e-61
tr|A1U984|A1U984_MYCSK Tax_Id=189918 SubName: Full=Two component...   238   3e-61
tr|B1MNV8|B1MNV8_MYCA9 Tax_Id=561007 SubName: Full=Putative tran...   233   1e-59
tr|A4T3R2|A4T3R2_MYCGI Tax_Id=350054 SubName: Full=Two component...   231   7e-59
tr|A1T1J1|A1T1J1_MYCVP Tax_Id=350058 SubName: Full=Two component...   231   7e-59
tr|Q82Q73|Q82Q73_STRAW Tax_Id=33903 SubName: Full=Putative two-c...   190   1e-46
tr|Q5YPS5|Q5YPS5_NOCFA Tax_Id=37329 SubName: Full=Putative two-c...   187   1e-45
tr|C2AMB6|C2AMB6_TSUPA Tax_Id=521096 SubName: Full=Response regu...   186   2e-45
sp|A0R3I8|MPRA_MYCS2 Tax_Id=246196 (mprA)RecName: Full=Response ...   184   5e-45
tr|Q2JDV8|Q2JDV8_FRASC Tax_Id=106370 SubName: Full=Two component...   184   5e-45
tr|Q0RPN0|Q0RPN0_FRAAA Tax_Id=326424 SubName: Full=Putative Tran...   183   1e-44
tr|C1A3C1|C1A3C1_RHOE4 Tax_Id=234621 (mprA)SubName: Full=Two-com...   181   6e-44
tr|C3JXB5|C3JXB5_RHOER Tax_Id=596309 SubName: Full=Response regu...   181   6e-44
tr|B5GEX2|B5GEX2_9ACTO Tax_Id=465543 SubName: Full=Two-component...   181   6e-44
tr|Q82G51|Q82G51_STRAW Tax_Id=33903 (mprA)SubName: Full=Putative...   180   1e-43
tr|C6WMN8|C6WMN8_ACTMD Tax_Id=446462 SubName: Full=Two component...   180   1e-43
tr|C6WJE3|C6WJE3_ACTMD Tax_Id=446462 SubName: Full=Two component...   180   1e-43
tr|A7NM12|A7NM12_ROSCS Tax_Id=383372 SubName: Full=Two component...   179   2e-43
tr|B5HLW7|B5HLW7_9ACTO Tax_Id=463191 SubName: Full=Two-component...   179   2e-43

>tr|B2HF74|B2HF74_MYCMM Tax_Id=216594 (prrA)SubName:
           Full=Two-component response transcriptional regulatory
           protein PrrA;[Mycobacterium marinum]
          Length = 236

 Score =  384 bits (986), Expect = e-105
 Identities = 204/236 (86%), Positives = 204/236 (86%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           MGGMDTGANSPR              ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL
Sbjct: 1   MGGMDTGANSPRVLVVDDDSDVLASLERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF       
Sbjct: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVA 120

Query: 121 XXXXXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180
                      TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA
Sbjct: 121 RVKALLRRRGATATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180

Query: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ
Sbjct: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236


>tr|A0PKW8|A0PKW8_MYCUA Tax_Id=362242 (prrA)SubName: Full=Two
           component response transcriptional regulatory protein
           PrrA;[Mycobacterium ulcerans]
          Length = 236

 Score =  380 bits (975), Expect = e-104
 Identities = 202/235 (85%), Positives = 202/235 (85%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           MGGMDTGANSPR              ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL
Sbjct: 1   MGGMDTGANSPRVLVVDDDSDVLASLERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF       
Sbjct: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVA 120

Query: 121 XXXXXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180
                      TATSSSE ITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA
Sbjct: 121 RVKALLRRRGATATSSSEIITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180

Query: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRM 235
           VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRM
Sbjct: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRM 235


>tr|C6DWJ0|C6DWJ0_MYCTK Tax_Id=478434 SubName: Full=Two component
           system transcriptional regulator prrA;[Mycobacterium
           tuberculosis]
          Length = 236

 Score =  375 bits (962), Expect = e-102
 Identities = 199/236 (84%), Positives = 200/236 (84%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           MGGMDTG  SPR              ERGLRLSGFEV+TAVDGAEALRSATE RPDAIVL
Sbjct: 1   MGGMDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVL 60

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF       
Sbjct: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVA 120

Query: 121 XXXXXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180
                      TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA
Sbjct: 121 RVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180

Query: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA GGPRLLHTVRGVGFVLRMQ
Sbjct: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|C1ALN7|C1ALN7_MYCBT Tax_Id=561275 (prrA)SubName: Full=Two
           component response transcriptional regulatory
           protein;[Mycobacterium bovis]
          Length = 236

 Score =  375 bits (962), Expect = e-102
 Identities = 199/236 (84%), Positives = 200/236 (84%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           MGGMDTG  SPR              ERGLRLSGFEV+TAVDGAEALRSATE RPDAIVL
Sbjct: 1   MGGMDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVL 60

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF       
Sbjct: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVA 120

Query: 121 XXXXXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180
                      TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA
Sbjct: 121 RVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180

Query: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA GGPRLLHTVRGVGFVLRMQ
Sbjct: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A5U0U2|A5U0U2_MYCTA Tax_Id=419947 (prrA)SubName: Full=Two
           component response transcriptional regulatory protein
           PrrA;[Mycobacterium tuberculosis]
          Length = 236

 Score =  375 bits (962), Expect = e-102
 Identities = 199/236 (84%), Positives = 200/236 (84%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           MGGMDTG  SPR              ERGLRLSGFEV+TAVDGAEALRSATE RPDAIVL
Sbjct: 1   MGGMDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVL 60

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF       
Sbjct: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVA 120

Query: 121 XXXXXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180
                      TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA
Sbjct: 121 RVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180

Query: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA GGPRLLHTVRGVGFVLRMQ
Sbjct: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A1KH35|A1KH35_MYCBP Tax_Id=410289 (prrA)SubName: Full=Two
           component response transcriptional regulatory protein
           prrA;[Mycobacterium bovis]
          Length = 236

 Score =  375 bits (962), Expect = e-102
 Identities = 199/236 (84%), Positives = 200/236 (84%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           MGGMDTG  SPR              ERGLRLSGFEV+TAVDGAEALRSATE RPDAIVL
Sbjct: 1   MGGMDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVL 60

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF       
Sbjct: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVA 120

Query: 121 XXXXXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180
                      TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA
Sbjct: 121 RVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180

Query: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA GGPRLLHTVRGVGFVLRMQ
Sbjct: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A5WKS5|A5WKS5_MYCTF Tax_Id=336982 SubName: Full=Two component
           system response transcriptional regulatory protein
           prrA;[Mycobacterium tuberculosis]
          Length = 236

 Score =  375 bits (962), Expect = e-102
 Identities = 199/236 (84%), Positives = 200/236 (84%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           MGGMDTG  SPR              ERGLRLSGFEV+TAVDGAEALRSATE RPDAIVL
Sbjct: 1   MGGMDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVL 60

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF       
Sbjct: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVA 120

Query: 121 XXXXXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180
                      TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA
Sbjct: 121 RVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180

Query: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA GGPRLLHTVRGVGFVLRMQ
Sbjct: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A4KFK7|A4KFK7_MYCTU Tax_Id=395095 SubName: Full=Two component
           response transcriptional regulatory protein
           prrA;[Mycobacterium tuberculosis str. Haarlem]
          Length = 236

 Score =  375 bits (962), Expect = e-102
 Identities = 199/236 (84%), Positives = 200/236 (84%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           MGGMDTG  SPR              ERGLRLSGFEV+TAVDGAEALRSATE RPDAIVL
Sbjct: 1   MGGMDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVL 60

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF       
Sbjct: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVA 120

Query: 121 XXXXXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180
                      TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA
Sbjct: 121 RVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180

Query: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA GGPRLLHTVRGVGFVLRMQ
Sbjct: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|A2VGJ7|A2VGJ7_MYCTU Tax_Id=348776 SubName: Full=Two component
           response transcriptional regulatory protein
           prrA;[Mycobacterium tuberculosis C]
          Length = 236

 Score =  375 bits (962), Expect = e-102
 Identities = 199/236 (84%), Positives = 200/236 (84%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           MGGMDTG  SPR              ERGLRLSGFEV+TAVDGAEALRSATE RPDAIVL
Sbjct: 1   MGGMDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVL 60

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF       
Sbjct: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVA 120

Query: 121 XXXXXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180
                      TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA
Sbjct: 121 RVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180

Query: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA GGPRLLHTVRGVGFVLRMQ
Sbjct: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 236


>tr|Q742K1|Q742K1_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 233

 Score =  373 bits (958), Expect = e-102
 Identities = 199/233 (85%), Positives = 200/233 (85%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MDT A+SPR              ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN
Sbjct: 1   MDTAASSPRVLVVDDDSDVLASLERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS
Sbjct: 121 ALLRRRGATATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 233


>tr|A0QBJ2|A0QBJ2_MYCA1 Tax_Id=243243 SubName: Full=Two component
           response transcriptional regulatory protein
           prra;[Mycobacterium avium]
          Length = 233

 Score =  373 bits (958), Expect = e-102
 Identities = 199/233 (85%), Positives = 200/233 (85%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MDT A+SPR              ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN
Sbjct: 1   MDTAASSPRVLVVDDDSDVLASLERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS
Sbjct: 121 ALLRRRGATATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 233


>sp|P0A5Z6|PRRA_MYCTU Tax_Id=1773 (prrA)RecName:
           Full=Transcriptional regulatory protein
           prrA;[Mycobacterium tuberculosis]
          Length = 233

 Score =  368 bits (945), Expect = e-100
 Identities = 196/233 (84%), Positives = 197/233 (84%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MDTG  SPR              ERGLRLSGFEV+TAVDGAEALRSATE RPDAIVLDIN
Sbjct: 1   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS
Sbjct: 121 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA GGPRLLHTVRGVGFVLRMQ
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 233


>sp|P0A5Z7|PRRA_MYCBO Tax_Id=1765 (prrA)RecName:
           Full=Transcriptional regulatory protein
           prrA;[Mycobacterium bovis]
          Length = 233

 Score =  368 bits (945), Expect = e-100
 Identities = 196/233 (84%), Positives = 197/233 (84%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MDTG  SPR              ERGLRLSGFEV+TAVDGAEALRSATE RPDAIVLDIN
Sbjct: 1   MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS
Sbjct: 121 ALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA GGPRLLHTVRGVGFVLRMQ
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ 233


>sp|Q50136|PRRA_MYCLE Tax_Id=1769 (prrA)RecName:
           Full=Transcriptional regulatory protein
           prrA;[Mycobacterium leprae]
          Length = 233

 Score =  367 bits (941), Expect = e-100
 Identities = 194/233 (83%), Positives = 197/233 (84%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MDTG +SPR              ERGLRLSGFEVSTA+DGAEALR+ATETRPDAIVLDIN
Sbjct: 1   MDTGVSSPRVLVVDDDSDVLASLERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 121 ALLRRRGATATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAN GPRLLHTVRGVGFVLRMQ
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233


>tr|B8ZSQ6|B8ZSQ6_MYCLB Tax_Id=561304 SubName: Full=Two-component
           response regulator;[Mycobacterium leprae]
          Length = 233

 Score =  367 bits (941), Expect = e-100
 Identities = 194/233 (83%), Positives = 197/233 (84%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MDTG +SPR              ERGLRLSGFEVSTA+DGAEALR+ATETRPDAIVLDIN
Sbjct: 1   MDTGVSSPRVLVVDDDSDVLASLERGLRLSGFEVSTAIDGAEALRNATETRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   TATSSSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKT VLS
Sbjct: 121 ALLRRRGATATSSSETIAVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTTVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAN GPRLLHTVRGVGFVLRMQ
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANSGPRLLHTVRGVGFVLRMQ 233


>tr|A1TF31|A1TF31_MYCVP Tax_Id=350058 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium vanbaalenii]
          Length = 233

 Score =  360 bits (925), Expect = 5e-98
 Identities = 192/233 (82%), Positives = 196/233 (84%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MD+GA SP+              ERGLRLSGF+V TAVDGAEALRSATETRPDAIVLDIN
Sbjct: 1   MDSGAGSPKVLVVDDDPDVLASLERGLRLSGFDVYTAVDGAEALRSATETRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   TAT SSETITVGPLEVDIPGRRARV+GVDVDLTKREFDLLAVLAEHKTAVLS
Sbjct: 121 ALLRRRGSTATFSSETITVGPLEVDIPGRRARVDGVDVDLTKREFDLLAVLAEHKTAVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANG PRLLHTVRGVGFVLR Q
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGAPRLLHTVRGVGFVLRQQ 233


>tr|Q1B3I2|Q1B3I2_MYCSS Tax_Id=164756 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 233

 Score =  358 bits (918), Expect = 4e-97
 Identities = 191/233 (81%), Positives = 194/233 (83%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MD+G  SPR              ERGLRLSGF+VSTAVDGAEALRSATETRPDAIVLDIN
Sbjct: 1   MDSGVGSPRVLVVDDDPDVLASLERGLRLSGFDVSTAVDGAEALRSATETRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   +AT SSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS
Sbjct: 121 ALLRRRGSSATFSSETIQVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA G PRLLHTVRGVGFVLR Q
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGAPRLLHTVRGVGFVLRTQ 233


>tr|A1ULL8|A1ULL8_MYCSK Tax_Id=189918 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 233

 Score =  358 bits (918), Expect = 4e-97
 Identities = 191/233 (81%), Positives = 194/233 (83%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MD+G  SPR              ERGLRLSGF+VSTAVDGAEALRSATETRPDAIVLDIN
Sbjct: 1   MDSGVGSPRVLVVDDDPDVLASLERGLRLSGFDVSTAVDGAEALRSATETRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   +AT SSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS
Sbjct: 121 ALLRRRGSSATFSSETIQVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA G PRLLHTVRGVGFVLR Q
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGAPRLLHTVRGVGFVLRTQ 233


>tr|A3Q618|A3Q618_MYCSJ Tax_Id=164757 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 233

 Score =  356 bits (914), Expect = 1e-96
 Identities = 190/233 (81%), Positives = 193/233 (82%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MD+G  SPR              ERGLRLSGF+VSTAVDGAEALRSATETRPDAIVLDIN
Sbjct: 1   MDSGVGSPRVLVVDDDPDVLASLERGLRLSGFDVSTAVDGAEALRSATETRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   +AT SSETI VGPLEVDIPGRRARVNG DVDLTKREFDLLAVLAEHKTAVLS
Sbjct: 121 ALLRRRGSSATFSSETIQVGPLEVDIPGRRARVNGADVDLTKREFDLLAVLAEHKTAVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA G PRLLHTVRGVGFVLR Q
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGAPRLLHTVRGVGFVLRTQ 233


>tr|A4T774|A4T774_MYCGI Tax_Id=350054 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium gilvum]
          Length = 231

 Score =  355 bits (911), Expect = 2e-96
 Identities = 192/233 (82%), Positives = 195/233 (83%), Gaps = 2/233 (0%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           MD+G  SPR              ERGLRLSGF+V TAVDGAEALRSATETRPDAIVLDIN
Sbjct: 1   MDSG--SPRVLVVDDDPDVLASLERGLRLSGFDVFTAVDGAEALRSATETRPDAIVLDIN 58

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF          
Sbjct: 59  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 118

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                   TAT SSETITVGPLEVDIPGRRARV+GVDVDLTKREFDLLAVLAEHKTAVLS
Sbjct: 119 ALLRRRGSTATFSSETITVGPLEVDIPGRRARVDGVDVDLTKREFDLLAVLAEHKTAVLS 178

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANG PRLLHTVRGVGFVLR Q
Sbjct: 179 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGAPRLLHTVRGVGFVLRQQ 231


>tr|A0R407|A0R407_MYCS2 Tax_Id=246196 (prrA)SubName:
           Full=DNA-binding response regulator PrrA;[Mycobacterium
           smegmatis]
          Length = 236

 Score =  353 bits (906), Expect = 9e-96
 Identities = 190/236 (80%), Positives = 193/236 (81%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           M    +G  SPR              ERGLRLSGF+VSTAVDGAEALRSATETRPDAIVL
Sbjct: 1   MDSTTSGMASPRVLVVDDDPDVLASLERGLRLSGFDVSTAVDGAEALRSATETRPDAIVL 60

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPF       
Sbjct: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVA 120

Query: 121 XXXXXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180
                      +AT SSETI VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA
Sbjct: 121 RVKALLRRRGSSATFSSETIQVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTA 180

Query: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA G PRLLHTVRGVGFVLR Q
Sbjct: 181 VLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGAPRLLHTVRGVGFVLRTQ 236


>tr|B1MJ92|B1MJ92_MYCA9 Tax_Id=561007 SubName: Full=Probable
           transcriptional regulatory protein PrrA;[Mycobacterium
           abscessus]
          Length = 233

 Score =  343 bits (880), Expect = 9e-93
 Identities = 183/233 (78%), Positives = 189/233 (81%)

Query: 4   MDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDIN 63
           M  G  SPR              ERGLRLSGFEV+TA DGAEALR ATE RPDAIVLDIN
Sbjct: 1   MVDGQGSPRVLVVDDDADVLASLERGLRLSGFEVNTASDGAEALRCATEHRPDAIVLDIN 60

Query: 64  MPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXX 123
           MPVLDGVSVVTALRAMDNDVPVCVLSAR+SVDDRVAGLEAGADDYL KPF          
Sbjct: 61  MPVLDGVSVVTALRAMDNDVPVCVLSARTSVDDRVAGLEAGADDYLTKPFVLAELVARVK 120

Query: 124 XXXXXXXXTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLS 183
                    ATSS+ETITVGPLEV+IPGRRAR+NGV+VDLTKREFDLLAVLAEHKTAVLS
Sbjct: 121 ALLRRRGAVATSSTETITVGPLEVEIPGRRARINGVEVDLTKREFDLLAVLAEHKTAVLS 180

Query: 184 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA G PRLLHTVRGVGFVLR Q
Sbjct: 181 RAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGAPRLLHTVRGVGFVLRSQ 233


>tr|C0ZMN4|C0ZMN4_RHOE4 Tax_Id=234621 (prrA)SubName:
           Full=Two-component response regulator PrrA;[Rhodococcus
           erythropolis]
          Length = 234

 Score =  267 bits (683), Expect = 6e-70
 Identities = 139/211 (65%), Positives = 161/211 (76%), Gaps = 3/211 (1%)

Query: 27  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86
           ERGLRLSGF V TAVDGA+ALR  ++ RPDA+VLDINMPVLDG  VVTALRA  N++P+C
Sbjct: 21  ERGLRLSGFTVLTAVDGADALRVISDKRPDAVVLDINMPVLDGTGVVTALRAAGNEIPIC 80

Query: 87  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSE---TITVG 143
           VLSAR+SVDDR+AGLE+GADDY+VKPF                   A   SE   T+ VG
Sbjct: 81  VLSARNSVDDRIAGLESGADDYMVKPFVLAELVARIRAMLRRSNTPAGDHSEGTNTLRVG 140

Query: 144 PLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVV 203
            L++D+ GRR RV+G +V LTKREF+LL VLA +   VL+R +LLELVWGYDF ADTNVV
Sbjct: 141 NLDIDLSGRRVRVDGKEVPLTKREFELLEVLAHNSGIVLTRERLLELVWGYDFVADTNVV 200

Query: 204 DVFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           DVFIGYLRRK E+ G PRLLHTVRGVGFVLR
Sbjct: 201 DVFIGYLRRKFESGGSPRLLHTVRGVGFVLR 231


>tr|C3JDU5|C3JDU5_RHOER Tax_Id=596309 (prrA)SubName:
           Full=DNA-binding response regulator PrrA;[Rhodococcus
           erythropolis SK121]
          Length = 234

 Score =  267 bits (683), Expect = 6e-70
 Identities = 139/211 (65%), Positives = 161/211 (76%), Gaps = 3/211 (1%)

Query: 27  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86
           ERGLRLSGF V TAVDGA+ALR  ++ RPDA+VLDINMPVLDG  VVTALRA  N++P+C
Sbjct: 21  ERGLRLSGFTVLTAVDGADALRVISDKRPDAVVLDINMPVLDGTGVVTALRAAGNEIPIC 80

Query: 87  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSE---TITVG 143
           VLSAR+SVDDR+AGLE+GADDY+VKPF                   A   SE   T+ VG
Sbjct: 81  VLSARNSVDDRIAGLESGADDYMVKPFVLAELVARIRAMLRRSNTPAGDHSEGTNTLRVG 140

Query: 144 PLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVV 203
            L++D+ GRR RV+G +V LTKREF+LL VLA +   VL+R +LLELVWGYDF ADTNVV
Sbjct: 141 NLDIDLSGRRVRVDGKEVPLTKREFELLEVLAHNSGIVLTRERLLELVWGYDFVADTNVV 200

Query: 204 DVFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           DVFIGYLRRK E+ G PRLLHTVRGVGFVLR
Sbjct: 201 DVFIGYLRRKFESGGSPRLLHTVRGVGFVLR 231


>tr|C0ZNA6|C0ZNA6_RHOE4 Tax_Id=234621 SubName: Full=Probable OmpR
           family two-component response regulator;[Rhodococcus
           erythropolis]
          Length = 231

 Score =  265 bits (677), Expect = 3e-69
 Identities = 136/210 (64%), Positives = 157/210 (74%)

Query: 27  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86
           ERGLRLSGF+ +TAVDG  AL S  +  P A+VLD+NMP LDGV VVTALRA+ N+VP+C
Sbjct: 21  ERGLRLSGFDTATAVDGRSALSSVNKQCPAALVLDVNMPGLDGVGVVTALRAIGNEVPIC 80

Query: 87  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLE 146
           VLSARSSV DR+AGLEAGADDYL KPF                     S    ITVGPL 
Sbjct: 81  VLSARSSVGDRIAGLEAGADDYLTKPFELAELVARLRALLRRTTRATPSVDHPITVGPLT 140

Query: 147 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 206
           VD+ G RA ++G  ++LTKREFDLL+VLAEH   VLSRAQLL LVWGYDFAADTNVVDVF
Sbjct: 141 VDLRGHRAHIDGGRIELTKREFDLLSVLAEHAGVVLSRAQLLRLVWGYDFAADTNVVDVF 200

Query: 207 IGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           + YLR+KLE +G PR++HTVRGVGFVLR +
Sbjct: 201 VTYLRKKLEVDGAPRVIHTVRGVGFVLRAE 230


>tr|C3JP12|C3JP12_RHOER Tax_Id=596309 (prrA)SubName:
           Full=DNA-binding response regulator PrrA;[Rhodococcus
           erythropolis SK121]
          Length = 234

 Score =  265 bits (677), Expect = 3e-69
 Identities = 136/210 (64%), Positives = 157/210 (74%)

Query: 27  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86
           ERGLRLSGF+ +TAVDG  AL S  +  P A+VLD+NMP LDGV VVTALRA+ N+VP+C
Sbjct: 24  ERGLRLSGFDTATAVDGRSALSSVNKQCPAALVLDVNMPGLDGVGVVTALRAIGNEVPIC 83

Query: 87  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLE 146
           VLSARSSV DR+AGLEAGADDYL KPF                     S    ITVGPL 
Sbjct: 84  VLSARSSVGDRIAGLEAGADDYLTKPFELAELVARLRALLRRTTRATPSVDHPITVGPLT 143

Query: 147 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 206
           VD+ G RA ++G  ++LTKREFDLL+VLAEH   VLSRAQLL LVWGYDFAADTNVVDVF
Sbjct: 144 VDLRGHRAHIDGRRIELTKREFDLLSVLAEHAGVVLSRAQLLRLVWGYDFAADTNVVDVF 203

Query: 207 IGYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
           + YLR+KLE +G PR++HTVRGVGFVLR +
Sbjct: 204 VTYLRKKLEVDGAPRVIHTVRGVGFVLRAE 233


>tr|Q5Z232|Q5Z232_NOCFA Tax_Id=37329 SubName: Full=Putative
           two-component system response regulator;[Nocardia
           farcinica]
          Length = 238

 Score =  264 bits (674), Expect = 7e-69
 Identities = 143/236 (60%), Positives = 167/236 (70%), Gaps = 3/236 (1%)

Query: 1   MGGMDTGANSPRXXXXXXXXXXXXXXERGLRLSGFEVSTAVDGAEALRSATETRPDAIVL 60
           MGG+ T   +P               ERGLRLSGF V  A DGA ALRS     PDA+VL
Sbjct: 1   MGGVSTSP-TPTVLVVDDDEDVLASVERGLRLSGFHVLVARDGAAALRSVNADCPDAVVL 59

Query: 61  DINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXX 120
           D+NMPVLDG  VVTALRA+ NDVP+CVLSAR+SVDDR++GLE+GADDYLVKPF       
Sbjct: 60  DMNMPVLDGAGVVTALRALGNDVPICVLSARASVDDRISGLESGADDYLVKPFVLAELVA 119

Query: 121 XXXXXXXXXXXT--ATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHK 178
                         A ++   ITVGPLEVD  G RA ++G +++LTKREF+LL+ LA + 
Sbjct: 120 RIKALLRRRTDAPAAAATPGAITVGPLEVDEAGYRALLHGREIELTKREFELLSTLARNA 179

Query: 179 TAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
             VLSR +LLELVWGYDFAADTNVVDVF+GYLRRKLEA+G PRLLHT+RGVGFVLR
Sbjct: 180 GVVLSRERLLELVWGYDFAADTNVVDVFVGYLRRKLEADGTPRLLHTIRGVGFVLR 235


>tr|C1ATP4|C1ATP4_RHOOB Tax_Id=632772 SubName: Full=OmpR family
           two-component response regulator;[Rhodococcus opacus]
          Length = 238

 Score =  254 bits (649), Expect = 5e-66
 Identities = 133/213 (62%), Positives = 156/213 (73%), Gaps = 5/213 (2%)

Query: 27  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86
           ERGLRLSGF V TAVDGA+ALR  +E RPDA+VLD+NMPV+DG  VVTALRAM ND+P+C
Sbjct: 23  ERGLRLSGFTVLTAVDGADALRVVSEQRPDAMVLDMNMPVIDGTGVVTALRAMSNDIPIC 82

Query: 87  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSET-----IT 141
           VLSAR +VDDR++GLE+GADDYLVKPF                  T  + +++     I 
Sbjct: 83  VLSARDTVDDRISGLESGADDYLVKPFVLAELIARIRAMLRRHGTTTAAPADSQATPPIR 142

Query: 142 VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTN 201
           VG LE+    RR  + G +V LTKREF+LL VLA +   VLSR +LLELVWGYDF ADTN
Sbjct: 143 VGALEIRTSARRVFMAGEEVTLTKREFELLEVLARNVGIVLSRERLLELVWGYDFVADTN 202

Query: 202 VVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           VVDVF+GYLRRK E  G PR+LHTVRGVGFVLR
Sbjct: 203 VVDVFVGYLRRKFEVGGQPRILHTVRGVGFVLR 235


>tr|Q0S6Q4|Q0S6Q4_RHOSR Tax_Id=101510 SubName: Full=Response
           regulator, two-component system;[Rhodococcus sp.]
          Length = 238

 Score =  253 bits (645), Expect = 2e-65
 Identities = 133/213 (62%), Positives = 157/213 (73%), Gaps = 5/213 (2%)

Query: 27  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86
           ERGLRLSGF V TAVDGA+ALR  +E RPDA+VLD+NMPV+DG  VVTALRAM+ND+P+C
Sbjct: 23  ERGLRLSGFTVLTAVDGADALRVVSERRPDAMVLDMNMPVIDGTGVVTALRAMNNDIPIC 82

Query: 87  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATS-----SSETIT 141
           VLSAR +VDDR++GLE+GADDYLVKPF                  TA +     ++  I 
Sbjct: 83  VLSARDTVDDRISGLESGADDYLVKPFVLAELIARIRAMLRRHGTTAAAPAGSPATPPIR 142

Query: 142 VGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTN 201
           VG LE+    RR  + G +V LTKREF+LL VLA +   VLSR +LLELVWGYDF ADTN
Sbjct: 143 VGALEIRTSARRVFMAGEEVTLTKREFELLEVLARNVGIVLSRERLLELVWGYDFVADTN 202

Query: 202 VVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           VVDVF+GYLRRK E  G PR+L+TVRGVGFVLR
Sbjct: 203 VVDVFVGYLRRKFEVGGQPRILYTVRGVGFVLR 235


>tr|A0QP21|A0QP21_MYCS2 Tax_Id=246196 SubName: Full=Two component
           response transcriptional regulatory protein
           prra;[Mycobacterium smegmatis]
          Length = 246

 Score =  239 bits (609), Expect = 2e-61
 Identities = 126/207 (60%), Positives = 149/207 (71%), Gaps = 1/207 (0%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           RGLR SGF+V  A  G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 38  RGLRHSGFDVRVAASGKEALRLLSTESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 97

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           LSAR +V+DR+AGLEAGADDYL KPF                  T    S+T+TVGP+ +
Sbjct: 98  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRASHTE-QPSDTMTVGPVTI 156

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R   V+G  VDLTKREFDLLAVLAE+   VLSR +LLELVWGYDF  DTNV DVFI
Sbjct: 157 DTARRLVFVSGERVDLTKREFDLLAVLAENAGVVLSRQRLLELVWGYDFDVDTNVADVFI 216

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
            YLRRKLE +G PR++HTVRG+G+VLR
Sbjct: 217 SYLRRKLERDGVPRVIHTVRGIGYVLR 243


>tr|Q1BFP8|Q1BFP8_MYCSS Tax_Id=164756 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 243

 Score =  238 bits (608), Expect = 3e-61
 Identities = 126/207 (60%), Positives = 150/207 (72%), Gaps = 1/207 (0%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           RGLR SGF+V  A +G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 35  RGLRHSGFDVRVAANGKEALRLLSAESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 94

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           LSAR +V+DR+AGLEAGADDYL KPF                  +    S+T+TVGPL +
Sbjct: 95  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRAHHS-DRPSDTMTVGPLTI 153

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R   V+G  VDLTKREFDLLAVLAE+   VLSR +LLELVWGYDF  DTNV DVFI
Sbjct: 154 DTARRLVFVDGERVDLTKREFDLLAVLAENNGVVLSRQRLLELVWGYDFDVDTNVADVFI 213

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
            YLRRKLE +G PR++HTVRG+G+VLR
Sbjct: 214 SYLRRKLERDGLPRVIHTVRGIGYVLR 240


>tr|A3PSU1|A3PSU1_MYCSJ Tax_Id=164757 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 243

 Score =  238 bits (608), Expect = 3e-61
 Identities = 126/207 (60%), Positives = 150/207 (72%), Gaps = 1/207 (0%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           RGLR SGF+V  A +G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 35  RGLRHSGFDVRVAANGKEALRLLSAESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 94

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           LSAR +V+DR+AGLEAGADDYL KPF                  +    S+T+TVGPL +
Sbjct: 95  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRAHHS-DRPSDTMTVGPLTI 153

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R   V+G  VDLTKREFDLLAVLAE+   VLSR +LLELVWGYDF  DTNV DVFI
Sbjct: 154 DTARRLVFVDGERVDLTKREFDLLAVLAENNGVVLSRQRLLELVWGYDFDVDTNVADVFI 213

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
            YLRRKLE +G PR++HTVRG+G+VLR
Sbjct: 214 SYLRRKLERDGLPRVIHTVRGIGYVLR 240


>tr|A1U984|A1U984_MYCSK Tax_Id=189918 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium sp.]
          Length = 243

 Score =  238 bits (608), Expect = 3e-61
 Identities = 126/207 (60%), Positives = 150/207 (72%), Gaps = 1/207 (0%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           RGLR SGF+V  A +G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 35  RGLRHSGFDVRVAANGKEALRLLSAESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 94

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           LSAR +V+DR+AGLEAGADDYL KPF                  +    S+T+TVGPL +
Sbjct: 95  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRAHHS-DRPSDTMTVGPLTI 153

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R   V+G  VDLTKREFDLLAVLAE+   VLSR +LLELVWGYDF  DTNV DVFI
Sbjct: 154 DTARRLVFVDGERVDLTKREFDLLAVLAENNGVVLSRQRLLELVWGYDFDVDTNVADVFI 213

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
            YLRRKLE +G PR++HTVRG+G+VLR
Sbjct: 214 SYLRRKLERDGLPRVIHTVRGIGYVLR 240


>tr|B1MNV8|B1MNV8_MYCA9 Tax_Id=561007 SubName: Full=Putative
           transcriptional regulatory protein PrrA;[Mycobacterium
           abscessus]
          Length = 236

 Score =  233 bits (594), Expect = 1e-59
 Identities = 121/208 (58%), Positives = 148/208 (71%), Gaps = 1/208 (0%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           RGLR SGF+V  AVDG +AL       PDA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 26  RGLRHSGFDVRVAVDGRDALTQLAADEPDALVLDVQMPELDGVAVVTALRALGNDIPICV 85

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSET-ITVGPLE 146
           LSAR +V+DR+AGLEAGADDYL KPF                   +   +++ ITVG + 
Sbjct: 86  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLRALLRRRGAGSGGLADSAITVGQIT 145

Query: 147 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 206
           VD+  R   VNG  V+L+KREFDLL VLAE+   VLSR +LLELVWGYDF  +TNV DVF
Sbjct: 146 VDVSRRLVFVNGERVELSKREFDLLVVLAENTGVVLSRTRLLELVWGYDFDVETNVADVF 205

Query: 207 IGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           + YLRRKLEA G  R++HTVRGVG+V+R
Sbjct: 206 VSYLRRKLEAGGAARVIHTVRGVGYVMR 233


>tr|A4T3R2|A4T3R2_MYCGI Tax_Id=350054 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium gilvum]
          Length = 248

 Score =  231 bits (588), Expect = 7e-59
 Identities = 122/207 (58%), Positives = 147/207 (71%), Gaps = 1/207 (0%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           RGLR SGF+V  A  G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 40  RGLRHSGFDVRVAATGKEALRLLSSESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 99

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           LSAR +V+DR+AGLEAGADDYL KPF                  +   +S+T+TVG L +
Sbjct: 100 LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRAHHS-DPTSDTMTVGSLTI 158

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R   V G  V+LTKREFDLLA LAE+   VLSR +LLELVWGYDF  DTNV DVF+
Sbjct: 159 DTARRLVFVAGERVELTKREFDLLAALAENAGVVLSRQRLLELVWGYDFDVDTNVADVFV 218

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
            YLRRKLE +G PR++HTVRG+G+VLR
Sbjct: 219 SYLRRKLERDGLPRVIHTVRGIGYVLR 245


>tr|A1T1J1|A1T1J1_MYCVP Tax_Id=350058 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Mycobacterium vanbaalenii]
          Length = 244

 Score =  231 bits (588), Expect = 7e-59
 Identities = 122/209 (58%), Positives = 147/209 (70%), Gaps = 1/209 (0%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           RGLR SGF+V  A  G EALR  +    DA+VLD+ MP LDGV+VVTALRA+ ND+P+CV
Sbjct: 36  RGLRHSGFDVRVAATGKEALRLLSSESHDALVLDVQMPELDGVAVVTALRALGNDIPICV 95

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           LSAR +V+DR+AGLEAGADDYL KPF                  +   +S+T+TVG L +
Sbjct: 96  LSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRAHHS-DPTSDTMTVGSLTI 154

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R   V G  V+LTKREFDLLA LAE+   VLSR +LLELVWGYDF  DTNV DVF+
Sbjct: 155 DTARRLVFVAGERVELTKREFDLLAALAENAGVVLSRQRLLELVWGYDFDVDTNVADVFV 214

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLRMQ 236
            YLRRKLE  G PR++HTVRG+G+VLR +
Sbjct: 215 SYLRRKLEREGLPRVIHTVRGIGYVLRAE 243


>tr|Q82Q73|Q82Q73_STRAW Tax_Id=33903 SubName: Full=Putative
           two-component system response regulator;[Streptomyces
           avermitilis]
          Length = 228

 Score =  190 bits (483), Expect = 1e-46
 Identities = 108/209 (51%), Positives = 125/209 (59%), Gaps = 3/209 (1%)

Query: 29  GLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVL 88
           GL L GF V  A DG  AL    +  P  IVLD+ MP L GV VV +LRA    +PVC+L
Sbjct: 17  GLGLEGFTVRLAEDGENALEQVADRLPSVIVLDVTMPGLSGVEVVQSLRAQGRTLPVCML 76

Query: 89  SARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETI---TVGPL 145
           SAR  VDDRVAGL A ADDY+VKPF                       S  +    +G +
Sbjct: 77  SARDEVDDRVAGLAARADDYVVKPFSIAELAARLHAIVRLHAIVRLHESTAVRPLVIGDV 136

Query: 146 EVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDV 205
            ++   R A   G D+ LT REFDLL  LA     VLSRAQLLE VWGY +  DTNVVDV
Sbjct: 137 TIEPARRVAARAGRDLHLTTREFDLLLALAHRPGQVLSRAQLLEQVWGYTWDVDTNVVDV 196

Query: 206 FIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           FIGYLR+KLEA+G PR+L TVRG+G VLR
Sbjct: 197 FIGYLRKKLEADGRPRILQTVRGIGLVLR 225


>tr|Q5YPS5|Q5YPS5_NOCFA Tax_Id=37329 SubName: Full=Putative
           two-component system response regulator;[Nocardia
           farcinica]
          Length = 228

 Score =  187 bits (474), Expect = 1e-45
 Identities = 99/207 (47%), Positives = 128/207 (61%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           R L  +G+ V  AVDG +AL  AT  RPDA+VLD+ MP LDG+ V   LR+  +D+P+ V
Sbjct: 18  RSLTFNGYTVDLAVDGVDALEKATAQRPDALVLDVMMPRLDGLEVCRRLRSTGDDLPILV 77

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           L+AR SV +RVAGL+AGADDYL KPF                      +SET+    L +
Sbjct: 78  LTARDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRRAPDPGDTSETLRFADLSL 137

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R        + LT+ EF LL +L  +   VL+R+++LE VWGYDF    N ++V+I
Sbjct: 138 DPVTREVSRGDRAISLTRTEFSLLEMLMANPRRVLTRSRILEEVWGYDFPTSGNALEVYI 197

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
           GYLRRK EA G PRL+HTVRGVG+VLR
Sbjct: 198 GYLRRKTEAEGEPRLIHTVRGVGYVLR 224


>tr|C2AMB6|C2AMB6_TSUPA Tax_Id=521096 SubName: Full=Response
           regulator with CheY-like receiver domain and
           winged-helix DNA-binding domain;[Tsukamurella
           paurometabola DSM 20162]
          Length = 228

 Score =  186 bits (472), Expect = 2e-45
 Identities = 96/207 (46%), Positives = 128/207 (61%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           R L  +G++V TAVDG +AL      RPDA+VLD+NMP LDG+ V   LR+  +D+P+ V
Sbjct: 18  RSLTFNGYQVDTAVDGQDALDHIASNRPDALVLDLNMPRLDGLEVCRRLRSAGDDLPILV 77

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           L+AR  V DRV+GL+AGADDYL KPF                     S +E +    L +
Sbjct: 78  LTARDGVSDRVSGLDAGADDYLPKPFALEELLARMRALLRRAVPDTASDNEVLRFEDLTL 137

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R        + LT+ EF LL +L  +   VL+R+++LE VWGYDF    N ++V++
Sbjct: 138 DPATREVSRGDRSISLTRTEFSLLEMLMGNPRRVLTRSRILEEVWGYDFPTSGNALEVYV 197

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
           GYLRRK EA+G PRL+HTVRGVG+VLR
Sbjct: 198 GYLRRKTEADGEPRLIHTVRGVGYVLR 224


>sp|A0R3I8|MPRA_MYCS2 Tax_Id=246196 (mprA)RecName: Full=Response
           regulator mprA; AltName: Full=Mycobacterial persistence
           regulator A;[Mycobacterium smegmatis]
          Length = 230

 Score =  184 bits (468), Expect = 5e-45
 Identities = 96/207 (46%), Positives = 128/207 (61%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           R L  +G+ V  A DG EAL + T  RPDA++LD+ MP LDG+ V   LR+  +D+P+ V
Sbjct: 20  RSLSFNGYSVELAQDGVEALDAITNNRPDALILDVMMPRLDGLEVCRQLRSTGDDLPILV 79

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           L+AR SV +RVAGL+AGADDYL KPF                    +  S+ +T   L +
Sbjct: 80  LTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTVSDDSGDSQKMTFSDLTL 139

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R     G  + LT+ EF LL +L  +   VL+R+++LE VWG+DF    N ++V+I
Sbjct: 140 DPVTREVTRGGRQISLTRTEFSLLEMLIANPRRVLTRSRILEEVWGFDFPTSGNALEVYI 199

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
           GYLRRK EA G PRL+HTVRGVG+VLR
Sbjct: 200 GYLRRKTEAEGEPRLIHTVRGVGYVLR 226


>tr|Q2JDV8|Q2JDV8_FRASC Tax_Id=106370 SubName: Full=Two component
           transcriptional regulator, winged helix family;[Frankia
           sp.]
          Length = 235

 Score =  184 bits (468), Expect = 5e-45
 Identities = 101/216 (46%), Positives = 131/216 (60%), Gaps = 8/216 (3%)

Query: 27  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86
           ER LR  G+EV+TAVDGA+AL      RPD +VLD+ MP +DG+     LRA  +DVPV 
Sbjct: 13  ERSLRFEGYEVATAVDGADALDVIGRERPDIVVLDVMMPRVDGLETCRRLRAQGDDVPVL 72

Query: 87  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSS--------E 138
           +L+AR  + DRV+GL+ GADDYLVKPF                   A   +         
Sbjct: 73  MLTARDGLADRVSGLDVGADDYLVKPFALEELFARLRALIRRAALAARVRAAGSRGIPDS 132

Query: 139 TITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAA 198
           T+  G + +D   R+      ++ LTK EF+LL +   H   VLSR+ ++E VWGYDF  
Sbjct: 133 TLRYGGVCLDQVSRQVTRGDRELILTKTEFELLELFLAHPRQVLSRSMIMERVWGYDFGP 192

Query: 199 DTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
            +N ++VF+ YLRRKLEANG PRLLHTVRGVG+VLR
Sbjct: 193 TSNSLEVFVSYLRRKLEANGEPRLLHTVRGVGYVLR 228


>tr|Q0RPN0|Q0RPN0_FRAAA Tax_Id=326424 SubName: Full=Putative
           Transcriptional regulatory protein;[Frankia alni]
          Length = 250

 Score =  183 bits (465), Expect = 1e-44
 Identities = 98/220 (44%), Positives = 131/220 (59%), Gaps = 12/220 (5%)

Query: 27  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86
           ER LR  G+EV+TAVDGA+AL +    +PD +VLD+ MP +DG+     LRA  +DVPV 
Sbjct: 24  ERSLRFEGYEVTTAVDGADALDAVCRDQPDIVVLDVMMPRIDGLETCRQLRARGDDVPVL 83

Query: 87  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATS----------- 135
           +L+AR  + DRV+GL+ GADDYLVKPF                   A +           
Sbjct: 84  MLTARDGLADRVSGLDVGADDYLVKPFALEELFARLRALTRRAALAARAAGAGGAGGPGA 143

Query: 136 -SSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGY 194
            +   +  G + +D   R+      ++ LTK EF+LL +   H   VLSR+ ++E VWGY
Sbjct: 144 LADSVLRYGGVSLDQASRQVTRGERELTLTKTEFELLELFLSHPRQVLSRSMIMERVWGY 203

Query: 195 DFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           DF   +N ++VF+ YLRRKLEA G PRLLHTVRGVG+VLR
Sbjct: 204 DFGPTSNSLEVFVSYLRRKLEAGGEPRLLHTVRGVGYVLR 243


>tr|C1A3C1|C1A3C1_RHOE4 Tax_Id=234621 (mprA)SubName:
           Full=Two-component response regulator MprA;[Rhodococcus
           erythropolis]
          Length = 228

 Score =  181 bits (459), Expect = 6e-44
 Identities = 95/207 (45%), Positives = 126/207 (60%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           R L  +G+ V  AVDG +AL      RPDA+VLD+ MP LDG+ V   LR+  +D+P+ V
Sbjct: 18  RSLSFNGYTVELAVDGLDALEKILANRPDAVVLDVMMPRLDGLEVCRRLRSAGDDLPILV 77

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           L+AR SV +RVAGL+AGADDYL KPF                     + SE +    L +
Sbjct: 78  LTARDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRTAPDLDADSEMMAFEDLTL 137

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R  +     + LT+ EF LL +L  +   VL+R ++LE VWGYDF    N ++V++
Sbjct: 138 DPVTREVKRGERSISLTRTEFSLLEMLMANPRRVLTRGRILEEVWGYDFPTSGNALEVYV 197

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
           GYLRRK EA+G PRL+HTVRGVG+VLR
Sbjct: 198 GYLRRKTEADGEPRLIHTVRGVGYVLR 224


>tr|C3JXB5|C3JXB5_RHOER Tax_Id=596309 SubName: Full=Response
           regulator;[Rhodococcus erythropolis SK121]
          Length = 228

 Score =  181 bits (459), Expect = 6e-44
 Identities = 95/207 (45%), Positives = 126/207 (60%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           R L  +G+ V  AVDG +AL      RPDA+VLD+ MP LDG+ V   LR+  +D+P+ V
Sbjct: 18  RSLSFNGYTVELAVDGLDALEKILANRPDAVVLDVMMPRLDGLEVCRRLRSAGDDLPILV 77

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           L+AR SV +RVAGL+AGADDYL KPF                     + SE +    L +
Sbjct: 78  LTARDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRTAPDLDADSEMMAFEDLTL 137

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D   R  +     + LT+ EF LL +L  +   VL+R ++LE VWGYDF    N ++V++
Sbjct: 138 DPVTREVKRGERSISLTRTEFSLLEMLMANPRRVLTRGRILEEVWGYDFPTSGNALEVYV 197

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
           GYLRRK EA+G PRL+HTVRGVG+VLR
Sbjct: 198 GYLRRKTEADGEPRLIHTVRGVGYVLR 224


>tr|B5GEX2|B5GEX2_9ACTO Tax_Id=465543 SubName: Full=Two-component
           system response regulator;[Streptomyces sp. SPB74]
          Length = 244

 Score =  181 bits (459), Expect = 6e-44
 Identities = 98/211 (46%), Positives = 126/211 (59%), Gaps = 4/211 (1%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           R L   G+ V  A DG EALR A  T PD +VLDI MP +DG++    LRA  + VPV +
Sbjct: 30  RSLVFEGYGVEVAADGHEALRQAAATPPDLVVLDIQMPGMDGLTAARRLRATGSTVPVLM 89

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXT----ATSSSETITVG 143
           L+AR +V DRV GL+AGADDYLVKPF                       A    ET++ G
Sbjct: 90  LTARDTVGDRVTGLDAGADDYLVKPFELDELFARIRALLRRSSYAVAEQAADDEETLSFG 149

Query: 144 PLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVV 203
            L +++  R     G  V+LT+ EF LL +   H   VL+R Q+L+ VWG+DF   +N +
Sbjct: 150 DLRMNLATREVTRGGRAVELTRTEFTLLEMFLAHPRQVLTREQILKTVWGFDFEPSSNSL 209

Query: 204 DVFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           DV++ YLRRK EA G PRL+HTVRGVG+VLR
Sbjct: 210 DVYVMYLRRKTEAGGEPRLVHTVRGVGYVLR 240


>tr|Q82G51|Q82G51_STRAW Tax_Id=33903 (mprA)SubName: Full=Putative
           two-component system response regulator;[Streptomyces
           avermitilis]
          Length = 243

 Score =  180 bits (457), Expect = 1e-43
 Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 4/212 (1%)

Query: 27  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86
           +R L   G++   AVDGA+AL  AT  +PD +VLDI MP +DG++    +R      P+ 
Sbjct: 27  QRSLAFEGYDTEVAVDGADALEKATAYQPDLVVLDIQMPRMDGLTAARRIRGAGTTTPIL 86

Query: 87  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATS----SSETITV 142
           +L+AR +V DRV GL+AGADDYLVKPF                   AT+      + +T 
Sbjct: 87  MLTARDTVGDRVTGLDAGADDYLVKPFELDELFARIRALLRRSSYAATAVGVPEDDALTF 146

Query: 143 GPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNV 202
           G L +D+  R     G  V+L + EF LL +   H   VL+R Q+L+ VWG+DF   +N 
Sbjct: 147 GDLRMDLATREVTRGGRSVELIRTEFTLLEMFLAHPRQVLTREQILKAVWGFDFEPSSNS 206

Query: 203 VDVFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           +DV++ YLRRK EA G PRL+HTVRGVG+VLR
Sbjct: 207 LDVYVMYLRRKTEAGGEPRLVHTVRGVGYVLR 238


>tr|C6WMN8|C6WMN8_ACTMD Tax_Id=446462 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Actinosynnema mirum]
          Length = 229

 Score =  180 bits (457), Expect = 1e-43
 Identities = 97/208 (46%), Positives = 125/208 (60%), Gaps = 1/208 (0%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           R LR  G+EV+TA DGA+AL      RPD ++LD+ MPVL G+    ALRA  +  PV +
Sbjct: 18  RTLRFEGYEVTTAHDGAQALDLVRSLRPDGVILDVTMPVLGGLDACRALRASGDTTPVLM 77

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSS-SETITVGPLE 146
           L+AR+ V DRVAGL+AGADDYL KPF                    T++ SE +    L 
Sbjct: 78  LTARAEVSDRVAGLDAGADDYLAKPFALQELLARVRALVRRGGYAGTAARSEALRFADLL 137

Query: 147 VDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVF 206
           +D   R  R     V LT+ EF +L     +   VLSR  +   VWG+DF A +N +DV+
Sbjct: 138 LDAGTREVRRGDRQVALTRTEFSILETFLRNPRLVLSREAMFRTVWGHDFGAGSNGLDVY 197

Query: 207 IGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           +GYLRRKLE +G PRL+HTVRGVG+VLR
Sbjct: 198 VGYLRRKLEQDGEPRLIHTVRGVGYVLR 225


>tr|C6WJE3|C6WJE3_ACTMD Tax_Id=446462 SubName: Full=Two component
           transcriptional regulator, winged helix family; Flags:
           Precursor;[Actinosynnema mirum]
          Length = 228

 Score =  180 bits (456), Expect = 1e-43
 Identities = 99/210 (47%), Positives = 129/210 (61%), Gaps = 6/210 (2%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           R L+ +G++V  A DG +AL S    RPDA+VLD+ MP LDG+ V   LR+  +D+P+ V
Sbjct: 18  RSLQFNGYQVDLAGDGQQALESVLSQRPDAMVLDVMMPRLDGLEVCRRLRSTGDDLPILV 77

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITV---GP 144
           L+AR +V DRV+GL+AGADDYL KPF                  TAT   E + +     
Sbjct: 78  LTARDAVSDRVSGLDAGADDYLPKPF---ALEELLARLRALLRRTATDVEEPVNLLRFAD 134

Query: 145 LEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVD 204
           LE+D   R  R     + LT+ EF LL +   H   VL+R ++LE VWGYDF    N ++
Sbjct: 135 LELDPGTRDVRRGERPISLTRTEFALLELFLAHPKQVLTRGRILEDVWGYDFPTSGNALE 194

Query: 205 VFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           V++GYLRRK EA G PRLLHTVRGVG+VLR
Sbjct: 195 VYVGYLRRKTEAGGEPRLLHTVRGVGYVLR 224


>tr|A7NM12|A7NM12_ROSCS Tax_Id=383372 SubName: Full=Two component
           transcriptional regulator, winged helix
           family;[Roseiflexus castenholzii]
          Length = 224

 Score =  179 bits (455), Expect = 2e-43
 Identities = 91/207 (43%), Positives = 129/207 (62%), Gaps = 3/207 (1%)

Query: 28  RGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCV 87
           RGL   G+ V  A DG +AL  A E  PD +VLD+ +P +DG+ V   LRA  +DVP+ +
Sbjct: 19  RGLTFEGYNVEIAADGRQALEIARERPPDLVVLDLMLPGIDGLEVARRLRAA-SDVPIIM 77

Query: 88  LSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSSETITVGPLEV 147
           L+AR +V DRVAGLEAGADDYL+KPF                    T++   +  GPL +
Sbjct: 78  LTARDAVPDRVAGLEAGADDYLIKPFAFEELLARIRVQLRRRQREDTAT--VLRYGPLTM 135

Query: 148 DIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFI 207
           D+      +    VDLT +E+DLL +   H   V++R  + + VWGY+F  ++N+++V++
Sbjct: 136 DLTAHEVTIGDRRVDLTAKEYDLLELFMRHPQQVMTRDVIYDRVWGYNFGGESNIIEVYV 195

Query: 208 GYLRRKLEANGGPRLLHTVRGVGFVLR 234
            YLR+KLEA G PRL+HTVRGVG++LR
Sbjct: 196 RYLRQKLEARGEPRLIHTVRGVGYILR 222


>tr|B5HLW7|B5HLW7_9ACTO Tax_Id=463191 SubName: Full=Two-component
           system response regulator;[Streptomyces sviceus ATCC
           29083]
          Length = 245

 Score =  179 bits (454), Expect = 2e-43
 Identities = 94/214 (43%), Positives = 127/214 (59%), Gaps = 6/214 (2%)

Query: 27  ERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 86
           +R L   G++   AVDGA+AL  AT  RPD +VLDI MP +DG++    +R   +  P+ 
Sbjct: 27  QRSLAFEGYDTEVAVDGADALDKATAYRPDLVVLDIQMPRMDGLTAARRIRGAGDTTPIL 86

Query: 87  VLSARSSVDDRVAGLEAGADDYLVKPFXXXXXXXXXXXXXXXXXXTATSSS------ETI 140
           +L+AR +V DRV GL+AGADDYLVKPF                   A + +      E +
Sbjct: 87  MLTARDTVGDRVTGLDAGADDYLVKPFELDELFARVRALLRRSSYAAAAGAAAADDDEAL 146

Query: 141 TVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADT 200
           T   L +D+  R     G  V+LT+ EF LL +   H   VL+R Q+L+ VWG+DF   +
Sbjct: 147 TFADLRMDLATREVTRAGRPVELTRTEFTLLEMFMAHPRQVLTREQILKAVWGFDFEPSS 206

Query: 201 NVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLR 234
           N +DV++ YLRRK EA G PRL+HTVRGVG+VLR
Sbjct: 207 NSLDVYVMYLRRKTEAGGEPRLVHTVRGVGYVLR 240


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.319    0.136    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 1,357,739,022
Number of extensions: 43686799
Number of successful extensions: 216771
Number of sequences better than 10.0: 53508
Number of HSP's gapped: 175943
Number of HSP's successfully gapped: 55477
Length of query: 236
Length of database: 3,846,993,858
Length adjustment: 133
Effective length of query: 103
Effective length of database: 2,347,391,859
Effective search space: 241781361477
Effective search space used: 241781361477
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)