BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4635 (212 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HF76|B2HF76_MYCMM Tax_Id=216594 SubName: Full=Conserved exp... 243 1e-62 sp|P64758|Y925_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized p... 104 5e-21 sp|P64757|Y901_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized p... 104 5e-21 tr|C6DWJ2|C6DWJ2_MYCTK Tax_Id=478434 SubName: Full=Hypothetical ... 104 5e-21 tr|C1ALN5|C1ALN5_MYCBT Tax_Id=561275 SubName: Full=Putative expo... 104 5e-21 tr|A5U0U0|A5U0U0_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 104 5e-21 tr|A1KH33|A1KH33_MYCBP Tax_Id=410289 SubName: Full=Possible cons... 104 5e-21 tr|A5WKS3|A5WKS3_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 104 5e-21 tr|A4KFK5|A4KFK5_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 104 5e-21 tr|A2VGJ5|A2VGJ5_MYCTU Tax_Id=348776 SubName: Full=Hypothetical ... 104 5e-21 tr|C7NK19|C7NK19_KYTSD Tax_Id=478801 SubName: Full=Putative unch... 74 8e-12 tr|A3THI9|A3THI9_9MICO Tax_Id=313589 SubName: Full=ATP synthase ... 58 6e-07 tr|C7MFF5|C7MFF5_BRAFD Tax_Id=446465 SubName: Full=LSU ribosomal... 58 8e-07 tr|A0JY01|A0JY01_ARTS2 Tax_Id=290399 SubName: Full=Putative unch... 54 9e-06 tr|B8HAT2|B8HAT2_ARTCA Tax_Id=452863 SubName: Full=Putative unch... 51 9e-05 tr|C1WG43|C1WG43_9ACTO Tax_Id=479435 RecName: Full=50S ribosomal... 50 1e-04 sp|A9B0N4|RS16_HERA2 Tax_Id=316274 (rpsP)RecName: Full=30S ribos... 46 0.003 tr|A3TH48|A3TH48_9MICO Tax_Id=313589 SubName: Full=50S ribosomal... 45 0.004 tr|A3TRE2|A3TRE2_9MICO Tax_Id=313589 SubName: Full=30s ribosomal... 43 0.026 sp|A1R568|RL20_ARTAT Tax_Id=290340 (rplT)RecName: Full=50S ribos... 42 0.057 tr|C7NKW1|C7NKW1_KYTSD Tax_Id=478801 RecName: Full=50S ribosomal... 42 0.057 tr|B2GJ21|B2GJ21_KOCRD Tax_Id=378753 (rplQ)RecName: Full=50S rib... 41 0.075 tr|C6R3L6|C6R3L6_9MICC Tax_Id=553201 RecName: Full=50S ribosomal... 41 0.075 tr|C2AM22|C2AM22_TSUPA Tax_Id=521096 RecName: Full=50S ribosomal... 41 0.097 tr|A3TH06|A3TH06_9MICO Tax_Id=313589 RecName: Full=50S ribosomal... 41 0.097 tr|C6WN99|C6WN99_ACTMD Tax_Id=446462 SubName: Full=Putative unch... 40 0.13 tr|C1WQE4|C1WQE4_9ACTO Tax_Id=479435 SubName: Full=Putative unch... 40 0.17 tr|A9WSR0|A9WSR0_RENSM Tax_Id=288705 RecName: Full=50S ribosomal... 40 0.22 tr|A4FPS6|A4FPS6_SACEN Tax_Id=405948 SubName: Full=Putative unch... 40 0.22 sp|Q6A6M7|RL4_PROAC Tax_Id=1747 (rplD)RecName: Full=50S ribosoma... 38 0.82 tr|C5CC35|C5CC35_MICLC Tax_Id=465515 RecName: Full=50S ribosomal... 38 0.82 tr|A0QVY4|A0QVY4_MYCS2 Tax_Id=246196 SubName: Full=Putative unch... 37 1.8 tr|C0ZBT3|C0ZBT3_BREBN Tax_Id=358681 SubName: Full=Putative nucl... 36 3.1 tr|A1T7V3|A1T7V3_MYCVP Tax_Id=350058 SubName: Full=LGFP repeat p... 35 4.1 tr|Q6A9U2|Q6A9U2_PROAC Tax_Id=1747 SubName: Full=Conserved prote... 35 5.3 tr|Q1BA09|Q1BA09_MYCSS Tax_Id=164756 SubName: Full=LGFP;[Mycobac... 35 5.3 tr|A3PYG5|A3PYG5_MYCSJ Tax_Id=164757 SubName: Full=LGFP repeat p... 35 5.3 tr|A1UF03|A1UF03_MYCSK Tax_Id=189918 SubName: Full=LGFP repeat p... 35 5.3 tr|O33070|O33070_MYCLE Tax_Id=1769 (MLCB57.59)SubName: Full=Puta... 35 5.3 >tr|B2HF76|B2HF76_MYCMM Tax_Id=216594 SubName: Full=Conserved exported or membrane protein;[Mycobacterium marinum] Length = 212 Score = 243 bits (620), Expect = 1e-62 Identities = 129/212 (60%), Positives = 129/212 (60%) Query: 1 MAHVHWWXXXXXXXXXXXXTCALMVRSTKYQVXXXXXXXXXXXXXXETKPPAMKTATAEP 60 MAHVHWW TCALMVRSTKYQV ETKPPAMKTATAEP Sbjct: 1 MAHVHWWLIILSFLLGLVLTCALMVRSTKYQVAAAASGAGADAADAETKPPAMKTATAEP 60 Query: 61 REKKAATGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKRMVGXXXXXXXXXXXXX 120 REKKAATGED VKRMVG Sbjct: 61 REKKAATGEDAPKKKVPGAKKKTAAAKKAAARKIAGARKRPVKRMVGAKRVPKKKVARAK 120 Query: 121 XXXTEKTAVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDS 180 TEKTAVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDS Sbjct: 121 RAPTEKTAVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDS 180 Query: 181 SYETTCAQVWFQDEXXXXXXXXXXWSKSTHRK 212 SYETTCAQVWFQDE WSKSTHRK Sbjct: 181 SYETTCAQVWFQDEAAAARAFFTAWSKSTHRK 212 >sp|P64758|Y925_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized protein Mb0925;[Mycobacterium bovis] Length = 175 Score = 104 bits (260), Expect = 5e-21 Identities = 48/77 (62%), Positives = 56/77 (72%) Query: 135 AAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 AA++ +APYGPGSARA ADG+GPQGW+VKGR+DTR YYTPED +Y+ T AQVWFQDE Sbjct: 98 AARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDE 157 Query: 195 XXXXXXXXXXWSKSTHR 211 W KST R Sbjct: 158 ESAARAFFTPWRKSTRR 174 >sp|P64757|Y901_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized protein Rv0901/MT0924;[Mycobacterium tuberculosis] Length = 175 Score = 104 bits (260), Expect = 5e-21 Identities = 48/77 (62%), Positives = 56/77 (72%) Query: 135 AAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 AA++ +APYGPGSARA ADG+GPQGW+VKGR+DTR YYTPED +Y+ T AQVWFQDE Sbjct: 98 AARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDE 157 Query: 195 XXXXXXXXXXWSKSTHR 211 W KST R Sbjct: 158 ESAARAFFTPWRKSTRR 174 >tr|C6DWJ2|C6DWJ2_MYCTK Tax_Id=478434 SubName: Full=Hypothetical exported protein;[Mycobacterium tuberculosis] Length = 175 Score = 104 bits (260), Expect = 5e-21 Identities = 48/77 (62%), Positives = 56/77 (72%) Query: 135 AAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 AA++ +APYGPGSARA ADG+GPQGW+VKGR+DTR YYTPED +Y+ T AQVWFQDE Sbjct: 98 AARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDE 157 Query: 195 XXXXXXXXXXWSKSTHR 211 W KST R Sbjct: 158 ESAARAFFTPWRKSTRR 174 >tr|C1ALN5|C1ALN5_MYCBT Tax_Id=561275 SubName: Full=Putative exported or membrane protein;[Mycobacterium bovis] Length = 175 Score = 104 bits (260), Expect = 5e-21 Identities = 48/77 (62%), Positives = 56/77 (72%) Query: 135 AAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 AA++ +APYGPGSARA ADG+GPQGW+VKGR+DTR YYTPED +Y+ T AQVWFQDE Sbjct: 98 AARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDE 157 Query: 195 XXXXXXXXXXWSKSTHR 211 W KST R Sbjct: 158 ESAARAFFTPWRKSTRR 174 >tr|A5U0U0|A5U0U0_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 175 Score = 104 bits (260), Expect = 5e-21 Identities = 48/77 (62%), Positives = 56/77 (72%) Query: 135 AAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 AA++ +APYGPGSARA ADG+GPQGW+VKGR+DTR YYTPED +Y+ T AQVWFQDE Sbjct: 98 AARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDE 157 Query: 195 XXXXXXXXXXWSKSTHR 211 W KST R Sbjct: 158 ESAARAFFTPWRKSTRR 174 >tr|A1KH33|A1KH33_MYCBP Tax_Id=410289 SubName: Full=Possible conserved exported or membrane protein;[Mycobacterium bovis] Length = 175 Score = 104 bits (260), Expect = 5e-21 Identities = 48/77 (62%), Positives = 56/77 (72%) Query: 135 AAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 AA++ +APYGPGSARA ADG+GPQGW+VKGR+DTR YYTPED +Y+ T AQVWFQDE Sbjct: 98 AARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDE 157 Query: 195 XXXXXXXXXXWSKSTHR 211 W KST R Sbjct: 158 ESAARAFFTPWRKSTRR 174 >tr|A5WKS3|A5WKS3_MYCTF Tax_Id=336982 SubName: Full=Hypothetical exported or membrane protein;[Mycobacterium tuberculosis] Length = 175 Score = 104 bits (260), Expect = 5e-21 Identities = 48/77 (62%), Positives = 56/77 (72%) Query: 135 AAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 AA++ +APYGPGSARA ADG+GPQGW+VKGR+DTR YYTPED +Y+ T AQVWFQDE Sbjct: 98 AARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDE 157 Query: 195 XXXXXXXXXXWSKSTHR 211 W KST R Sbjct: 158 ESAARAFFTPWRKSTRR 174 >tr|A4KFK5|A4KFK5_MYCTU Tax_Id=395095 SubName: Full=Hypothetical exported or membrane protein;[Mycobacterium tuberculosis str. Haarlem] Length = 175 Score = 104 bits (260), Expect = 5e-21 Identities = 48/77 (62%), Positives = 56/77 (72%) Query: 135 AAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 AA++ +APYGPGSARA ADG+GPQGW+VKGR+DTR YYTPED +Y+ T AQVWFQDE Sbjct: 98 AARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDE 157 Query: 195 XXXXXXXXXXWSKSTHR 211 W KST R Sbjct: 158 ESAARAFFTPWRKSTRR 174 >tr|A2VGJ5|A2VGJ5_MYCTU Tax_Id=348776 SubName: Full=Hypothetical exported or membrane protein;[Mycobacterium tuberculosis C] Length = 175 Score = 104 bits (260), Expect = 5e-21 Identities = 48/77 (62%), Positives = 56/77 (72%) Query: 135 AAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 AA++ +APYGPGSARA ADG+GPQGW+VKGR+DTR YYTPED +Y+ T AQVWFQDE Sbjct: 98 AARIPVVPYAPYGPGSARAGADGSGPQGWLVKGRSDTRLYYTPEDPTYDPTVAQVWFQDE 157 Query: 195 XXXXXXXXXXWSKSTHR 211 W KST R Sbjct: 158 ESAARAFFTPWRKSTRR 174 >tr|C7NK19|C7NK19_KYTSD Tax_Id=478801 SubName: Full=Putative uncharacterized protein;[Kytococcus sedentarius] Length = 385 Score = 74.3 bits (181), Expect = 8e-12 Identities = 31/64 (48%), Positives = 40/64 (62%) Query: 144 APYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDEXXXXXXXXX 203 APYGPGSAR+ ADG+GP+GW +KG D+ ++T E YE T A+VWF DE Sbjct: 319 APYGPGSARSAADGSGPEGWAIKGNADSGLFHTEESPGYENTRAEVWFADEASAIAAGFR 378 Query: 204 XWSK 207 W + Sbjct: 379 HWDR 382 >tr|A3THI9|A3THI9_9MICO Tax_Id=313589 SubName: Full=ATP synthase subunit E; EC=3.6.3.14;[Janibacter sp. HTCC2649] Length = 417 Score = 58.2 bits (139), Expect = 6e-07 Identities = 26/65 (40%), Positives = 41/65 (63%) Query: 130 TEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQV 189 T ++ A A + + +G G+A A ADG+GP GW +KG ++ ++TP+ Y T A+V Sbjct: 332 TAQTGGAAPAGFKTSSFGDGTADAAADGSGPAGWDIKGNANSMLFHTPKSPWYGRTRAEV 391 Query: 190 WFQDE 194 WF+DE Sbjct: 392 WFRDE 396 >tr|C7MFF5|C7MFF5_BRAFD Tax_Id=446465 SubName: Full=LSU ribosomal protein L4P;[Brachybacterium faecium] Length = 312 Score = 57.8 bits (138), Expect = 8e-07 Identities = 26/60 (43%), Positives = 36/60 (60%) Query: 135 AAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 AA A PYG GSA A ADG+ P+G+ +KG ++ ++TP+ Y T A+VWF E Sbjct: 229 AAAPAAAEEGPYGEGSAAATADGSAPEGYAIKGNQGSKKFHTPDSPWYGRTKAEVWFATE 288 >tr|A0JY01|A0JY01_ARTS2 Tax_Id=290399 SubName: Full=Putative uncharacterized protein;[Arthrobacter sp.] Length = 365 Score = 54.3 bits (129), Expect = 9e-06 Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 124 TEKTAVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYE 183 TE A A LA + PYG GSA DG+GP G+ VKG + Y+ YE Sbjct: 281 TEAAASHAAEPAGHLAADK--PYGEGSAAPGPDGSGPDGYTVKGNAQSMIYHDETSPGYE 338 Query: 184 TTCAQVWFQ 192 T A+VWF+ Sbjct: 339 ETTAEVWFE 347 >tr|B8HAT2|B8HAT2_ARTCA Tax_Id=452863 SubName: Full=Putative uncharacterized protein;[Arthrobacter chlorophenolicus] Length = 406 Score = 50.8 bits (120), Expect = 9e-05 Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 6/66 (9%) Query: 133 SSAAQLAP---GRFA---PYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTC 186 S+ AQ AP G A PYG GSA A ADG+GP + VKG + YY Y+ T Sbjct: 323 SAPAQGAPEPQGHLAAEEPYGAGSAGAGADGSGPAEYTVKGDAGSMVYYEEGHPDYDGTR 382 Query: 187 AQVWFQ 192 A+VWF+ Sbjct: 383 AEVWFE 388 >tr|C1WG43|C1WG43_9ACTO Tax_Id=479435 RecName: Full=50S ribosomal protein L17;[Kribbella flavida DSM 17836] Length = 211 Score = 50.4 bits (119), Expect = 1e-04 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Query: 125 EKTAVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYET 184 E T ++ + + G++ GSA ADG+ P+G+ +KG ++ Y+TP+ YE Sbjct: 129 EATDEVKDEAVQDVVAGKYE----GSAAPTADGSAPEGFDIKGNENSMKYHTPDSPWYEQ 184 Query: 185 TCAQVWFQDE 194 T A+VWF E Sbjct: 185 TEAEVWFSTE 194 >sp|A9B0N4|RS16_HERA2 Tax_Id=316274 (rpsP)RecName: Full=30S ribosomal protein S16;[Herpetosiphon aurantiacus] Length = 191 Score = 45.8 bits (107), Expect = 0.003 Identities = 23/66 (34%), Positives = 35/66 (53%) Query: 126 KTAVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETT 185 K AV + AA + A GS R ADG+ P+G+ +KG ++ Y+ P Y +T Sbjct: 106 KAAVAPVAVAAPVKAEAEAGEFAGSVRPLADGSAPEGYAIKGNQNSMLYHVPGSRYYNST 165 Query: 186 CAQVWF 191 A++WF Sbjct: 166 VAELWF 171 >tr|A3TH48|A3TH48_9MICO Tax_Id=313589 SubName: Full=50S ribosomal protein L4;[Janibacter sp. HTCC2649] Length = 331 Score = 45.4 bits (106), Expect = 0.004 Identities = 25/68 (36%), Positives = 34/68 (50%) Query: 125 EKTAVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYET 184 EK A E+ AA +G S A DGT P G+ +KG D+ Y+ P Y+ Sbjct: 238 EKPAKLVETEAAAPEAEVDGGFGSDSHAALEDGTAPAGFGIKGNKDSMKYHVPGSRWYDA 297 Query: 185 TCAQVWFQ 192 T A+VWF+ Sbjct: 298 TEAEVWFR 305 >tr|A3TRE2|A3TRE2_9MICO Tax_Id=313589 SubName: Full=30s ribosomal protein s16;[Janibacter sp. HTCC2649] Length = 227 Score = 42.7 bits (99), Expect = 0.026 Identities = 16/45 (35%), Positives = 28/45 (62%) Query: 149 GSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQD 193 G+A A G P+G+ +KG D+ ++ P+ +E T A+VWF++ Sbjct: 169 GAAAALEGGAAPEGYTIKGNADSMKFHEPDGQWFEQTVAEVWFKN 213 >sp|A1R568|RL20_ARTAT Tax_Id=290340 (rplT)RecName: Full=50S ribosomal protein L20;[Arthrobacter aurescens] Length = 222 Score = 41.6 bits (96), Expect = 0.057 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 126 KTAVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETT 185 K A ++ A A P G+ AD D P+G+ +KG +++ Y+ P + Y TT Sbjct: 134 KVAPAAATATAVKAVVSEKPAIDGAVAADGD-EAPEGYAIKGNAESKKYHVPGSTWYNTT 192 Query: 186 CAQVWF 191 A+ WF Sbjct: 193 AAEYWF 198 >tr|C7NKW1|C7NKW1_KYTSD Tax_Id=478801 RecName: Full=50S ribosomal protein L17;[Kytococcus sedentarius] Length = 268 Score = 41.6 bits (96), Expect = 0.057 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 149 GSARADADGTGP-QGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 G+A A ADG P + + VKG D+ Y+ P +E+T A+VWF+ E Sbjct: 209 GAANALADGAAPSEEYTVKGNMDSGKYHQPGGRWFESTVAEVWFKSE 255 >tr|B2GJ21|B2GJ21_KOCRD Tax_Id=378753 (rplQ)RecName: Full=50S ribosomal protein L17;[Kocuria rhizophila] Length = 254 Score = 41.2 bits (95), Expect = 0.075 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 128 AVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCA 187 AV E +A A + A + PGS G P+G+ VKG ++ Y+ P Y T A Sbjct: 168 AVGSEEAAEVAAENQDAEF-PGSHAPLESGEAPEGFAVKGNRNSMKYHVPGSRWYSGTTA 226 Query: 188 QVWF 191 ++WF Sbjct: 227 EIWF 230 >tr|C6R3L6|C6R3L6_9MICC Tax_Id=553201 RecName: Full=50S ribosomal protein L17;[Rothia mucilaginosa ATCC 25296] Length = 217 Score = 41.2 bits (95), Expect = 0.075 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 9/68 (13%) Query: 125 EKTAVTEESSAAQLAP-GRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYE 183 EK A ++ AA+ P G AP G A P+G+ VKG D+ Y+ P Y Sbjct: 134 EKAAEAPKAEAAEGLPAGSHAPLESGEA--------PEGFEVKGNADSMKYHVPGSRWYS 185 Query: 184 TTCAQVWF 191 +T A++WF Sbjct: 186 STKAEIWF 193 >tr|C2AM22|C2AM22_TSUPA Tax_Id=521096 RecName: Full=50S ribosomal protein L17;[Tsukamurella paurometabola DSM 20162] Length = 224 Score = 40.8 bits (94), Expect = 0.097 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Query: 126 KTAVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETT 185 K + + S A+ L G AP + P+G+ +KG D++ Y+ P +++T Sbjct: 144 KGSEADASEASDLPAGAHAPL-------EDPNEAPEGFPIKGNADSKLYHKPGTRFFDST 196 Query: 186 CAQVWFQDE 194 A++WF D+ Sbjct: 197 VAEIWFADD 205 >tr|A3TH06|A3TH06_9MICO Tax_Id=313589 RecName: Full=50S ribosomal protein L17;[Janibacter sp. HTCC2649] Length = 237 Score = 40.8 bits (94), Expect = 0.097 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%) Query: 130 TEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQV 189 TE ++A +L G AP DG+ P+G+ VKG D+ Y+ Y+ T A+ Sbjct: 158 TEAAAAVELPKGAVAP--------TEDGSAPEGYSVKGNADSGKYHVEGSQWYDQTEAEF 209 Query: 190 WF 191 WF Sbjct: 210 WF 211 >tr|C6WN99|C6WN99_ACTMD Tax_Id=446462 SubName: Full=Putative uncharacterized protein;[Actinosynnema mirum] Length = 868 Score = 40.4 bits (93), Expect = 0.13 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 144 APYGPGSARADADGTGPQG-WVVKGRTDTRHYYTPEDSSYETTCAQVWFQ 192 +P+GPGS +DG P +VVK R Y+T +++ T A VWF+ Sbjct: 805 SPFGPGSVLPKSDGKAPAPEFVVKATLTGRRYFTDASANFRETRADVWFR 854 >tr|C1WQE4|C1WQE4_9ACTO Tax_Id=479435 SubName: Full=Putative uncharacterized protein;[Kribbella flavida DSM 17836] Length = 203 Score = 40.0 bits (92), Expect = 0.17 Identities = 19/49 (38%), Positives = 26/49 (53%) Query: 146 YGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 YGPGSA A P G+ +KG + ++TP+ Y T VWF+ E Sbjct: 128 YGPGSADAVPHQGPPDGFRIKGVVGSMLFHTPQSPDYGRTRPDVWFRTE 176 >tr|A9WSR0|A9WSR0_RENSM Tax_Id=288705 RecName: Full=50S ribosomal protein L17;[Renibacterium salmoninarum] Length = 239 Score = 39.7 bits (91), Expect = 0.22 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 126 KTAVTEESSAAQL---APGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSY 182 +T V EE+ A + A + Y A + P+G+ +KG D+ Y+ P Y Sbjct: 145 ETEVAEEAPAEVVETEAAEETSKYAGSHATLEDPNEAPEGFDIKGNEDSMKYHVPGSRWY 204 Query: 183 ETTCAQVWF 191 + T A+VWF Sbjct: 205 DNTVAEVWF 213 >tr|A4FPS6|A4FPS6_SACEN Tax_Id=405948 SubName: Full=Putative uncharacterized protein;[Saccharopolyspora erythraea] Length = 468 Score = 39.7 bits (91), Expect = 0.22 Identities = 16/35 (45%), Positives = 23/35 (65%) Query: 158 TGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQ 192 T +G++VKG +R Y+TPE YE A+VWF+ Sbjct: 414 TRREGYMVKGHFASRQYHTPESPQYERIVAEVWFR 448 >sp|Q6A6M7|RL4_PROAC Tax_Id=1747 (rplD)RecName: Full=50S ribosomal protein L4;[Propionibacterium acnes] Length = 301 Score = 37.7 bits (86), Expect = 0.82 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 145 PYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQ 192 PYG S R D P G+ +KG D+ ++ P Y T A+VWF+ Sbjct: 233 PYGEDSFRGD---NPPAGFDIKGNEDSMKFHEPSSPWYGRTIAEVWFR 277 >tr|C5CC35|C5CC35_MICLC Tax_Id=465515 RecName: Full=50S ribosomal protein L17;[Micrococcus luteus] Length = 242 Score = 37.7 bits (86), Expect = 0.82 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 128 AVTEESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCA 187 A TEE + A+ A G+ + DG+ P +KG ++ Y+ P Y+ T A Sbjct: 158 AATEEVTVAESQ--ETAAEIDGAVPTNEDGSAPAEATIKGNASSKKYHVPGSRWYDQTTA 215 Query: 188 QVWF 191 +VWF Sbjct: 216 EVWF 219 >tr|A0QVY4|A0QVY4_MYCS2 Tax_Id=246196 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 811 Score = 36.6 bits (83), Expect = 1.8 Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 160 PQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 P G+ +K T T Y+ P+ + YE A++WF E Sbjct: 765 PDGYPIKADTKTGMYWAPDSADYEDAVAEIWFASE 799 >tr|C0ZBT3|C0ZBT3_BREBN Tax_Id=358681 SubName: Full=Putative nuclease; EC=3.1.31.1;[Brevibacillus brevis] Length = 236 Score = 35.8 bits (81), Expect = 3.1 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 132 ESSAAQLAPGRFAPYGPGSARADADGTGPQGWVVKGRTDTRH---YYTPEDSSYETTCAQ 188 E A+ + + P + AD P+G +KG +++ Y+ P +SYE T A+ Sbjct: 158 EEKQAEASKEKAKPKKQSNNNTVADTAPPEGKTIKGNINSKGEKIYHVPGSASYEQTNAE 217 Query: 189 VWFQDE 194 WF E Sbjct: 218 TWFATE 223 >tr|A1T7V3|A1T7V3_MYCVP Tax_Id=350058 SubName: Full=LGFP repeat protein; Flags: Precursor;[Mycobacterium vanbaalenii] Length = 686 Score = 35.4 bits (80), Expect = 4.1 Identities = 14/35 (40%), Positives = 19/35 (54%) Query: 160 PQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 P+G+ VK T T Y+TPE Y ++WF E Sbjct: 640 PEGYPVKADTKTGLYWTPESDDYHEAPVEIWFATE 674 >tr|Q6A9U2|Q6A9U2_PROAC Tax_Id=1747 SubName: Full=Conserved protein, putative regulatory protein;[Propionibacterium acnes] Length = 371 Score = 35.0 bits (79), Expect = 5.3 Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 160 PQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 P+ +V+KG + Y+ P Y+ T A VWF E Sbjct: 324 PESYVIKGNDRSMKYHVPGSGGYDRTIADVWFATE 358 >tr|Q1BA09|Q1BA09_MYCSS Tax_Id=164756 SubName: Full=LGFP;[Mycobacterium sp.] Length = 754 Score = 35.0 bits (79), Expect = 5.3 Identities = 15/41 (36%), Positives = 21/41 (51%) Query: 154 DADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 DA G P G+ VK T T Y+ P Y+ A+++F E Sbjct: 702 DASGVAPTGYPVKADTRTGLYWVPGSRGYDDAVAEIYFASE 742 >tr|A3PYG5|A3PYG5_MYCSJ Tax_Id=164757 SubName: Full=LGFP repeat protein; Flags: Precursor;[Mycobacterium sp.] Length = 706 Score = 35.0 bits (79), Expect = 5.3 Identities = 15/41 (36%), Positives = 21/41 (51%) Query: 154 DADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 DA G P G+ VK T T Y+ P Y+ A+++F E Sbjct: 654 DASGVAPTGYPVKADTRTGLYWVPGSRGYDDAVAEIYFASE 694 >tr|A1UF03|A1UF03_MYCSK Tax_Id=189918 SubName: Full=LGFP repeat protein; Flags: Precursor;[Mycobacterium sp.] Length = 705 Score = 35.0 bits (79), Expect = 5.3 Identities = 15/41 (36%), Positives = 21/41 (51%) Query: 154 DADGTGPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDE 194 DA G P G+ VK T T Y+ P Y+ A+++F E Sbjct: 653 DASGVAPTGYPVKADTRTGLYWVPGSRGYDDAVAEIYFASE 693 >tr|O33070|O33070_MYCLE Tax_Id=1769 (MLCB57.59)SubName: Full=Putative uncharacterized protein MLCB57.59;[Mycobacterium leprae] Length = 113 Score = 35.0 bits (79), Expect = 5.3 Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 159 GPQGWVVKGRTDTRHYYTPEDSSYETTCAQVWFQDEXXXXXXXXXXWSKSTHR 211 G + +VK R+ R YY +D +Y++ AQ+ F+D W KS+ + Sbjct: 61 GRRDELVKSRSYIRFYYMLDDRTYDSAVAQIGFEDTEYAKRAYFTPWRKSSRK 113 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.312 0.124 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 951,286,140 Number of extensions: 28069916 Number of successful extensions: 47529 Number of sequences better than 10.0: 39 Number of HSP's gapped: 47696 Number of HSP's successfully gapped: 39 Length of query: 212 Length of database: 3,846,993,858 Length adjustment: 132 Effective length of query: 80 Effective length of database: 2,358,667,062 Effective search space: 188693364960 Effective search space used: 188693364960 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 77 (34.3 bits)