BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4636 (77 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HF77|B2HF77_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 63 1e-08 tr|A0PKX0|A0PKX0_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 63 1e-08 sp|P64756|Y924_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized p... 46 0.002 sp|P64755|Y900_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized p... 46 0.002 tr|C1ALN4|C1ALN4_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 46 0.002 tr|A5U0T9|A5U0T9_MYCTA Tax_Id=419947 SubName: Full=Putative memb... 46 0.002 tr|A1KH32|A1KH32_MYCBP Tax_Id=410289 SubName: Full=Possible memb... 46 0.002 tr|A2VGJ4|A2VGJ4_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 46 0.002 >tr|B2HF77|B2HF77_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium marinum] Length = 77 Score = 62.8 bits (151), Expect = 1e-08 Identities = 37/77 (48%), Positives = 38/77 (49%) Query: 1 VDFVIQWLYYLAAFVVGSAVAWGIVTVSIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60 +DFVIQWLYYLAAFVVGSAVAWGIVTVSIK Sbjct: 1 MDFVIQWLYYLAAFVVGSAVAWGIVTVSIKPVATTAEAVEAEQTEQPEQTEQTEQTEQTE 60 Query: 61 XXXXXXXXXSHQTEVAQ 77 SHQTEVAQ Sbjct: 61 QTEEPDPAESHQTEVAQ 77 >tr|A0PKX0|A0PKX0_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical membrane protein;[Mycobacterium ulcerans] Length = 77 Score = 62.8 bits (151), Expect = 1e-08 Identities = 37/77 (48%), Positives = 38/77 (49%) Query: 1 VDFVIQWLYYLAAFVVGSAVAWGIVTVSIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60 +DFVIQWLYYLAAFVVGSAVAWGIVTVSIK Sbjct: 1 MDFVIQWLYYLAAFVVGSAVAWGIVTVSIKPVATTAEAVEAEQTEQTEQTEQTEQTEQTE 60 Query: 61 XXXXXXXXXSHQTEVAQ 77 SHQTEVAQ Sbjct: 61 QAEEPDPAASHQTEVAQ 77 >sp|P64756|Y924_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized protein Mb0924; Flags: Precursor;[Mycobacterium bovis] Length = 50 Score = 45.8 bits (107), Expect = 0.002 Identities = 21/30 (70%), Positives = 25/30 (83%) Query: 1 VDFVIQWLYYLAAFVVGSAVAWGIVTVSIK 30 +DFVIQW YL AF+ GSAVAW +VT+SIK Sbjct: 1 MDFVIQWSCYLLAFLGGSAVAWVVVTLSIK 30 >sp|P64755|Y900_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized protein Rv0900/MT0923; Flags: Precursor;[Mycobacterium tuberculosis] Length = 50 Score = 45.8 bits (107), Expect = 0.002 Identities = 21/30 (70%), Positives = 25/30 (83%) Query: 1 VDFVIQWLYYLAAFVVGSAVAWGIVTVSIK 30 +DFVIQW YL AF+ GSAVAW +VT+SIK Sbjct: 1 MDFVIQWSCYLLAFLGGSAVAWVVVTLSIK 30 >tr|C1ALN4|C1ALN4_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 50 Score = 45.8 bits (107), Expect = 0.002 Identities = 21/30 (70%), Positives = 25/30 (83%) Query: 1 VDFVIQWLYYLAAFVVGSAVAWGIVTVSIK 30 +DFVIQW YL AF+ GSAVAW +VT+SIK Sbjct: 1 MDFVIQWSCYLLAFLGGSAVAWVVVTLSIK 30 >tr|A5U0T9|A5U0T9_MYCTA Tax_Id=419947 SubName: Full=Putative membrane protein;[Mycobacterium tuberculosis] Length = 50 Score = 45.8 bits (107), Expect = 0.002 Identities = 21/30 (70%), Positives = 25/30 (83%) Query: 1 VDFVIQWLYYLAAFVVGSAVAWGIVTVSIK 30 +DFVIQW YL AF+ GSAVAW +VT+SIK Sbjct: 1 MDFVIQWSCYLLAFLGGSAVAWVVVTLSIK 30 >tr|A1KH32|A1KH32_MYCBP Tax_Id=410289 SubName: Full=Possible membrane protein;[Mycobacterium bovis] Length = 50 Score = 45.8 bits (107), Expect = 0.002 Identities = 21/30 (70%), Positives = 25/30 (83%) Query: 1 VDFVIQWLYYLAAFVVGSAVAWGIVTVSIK 30 +DFVIQW YL AF+ GSAVAW +VT+SIK Sbjct: 1 MDFVIQWSCYLLAFLGGSAVAWVVVTLSIK 30 >tr|A2VGJ4|A2VGJ4_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 50 Score = 45.8 bits (107), Expect = 0.002 Identities = 21/30 (70%), Positives = 25/30 (83%) Query: 1 VDFVIQWLYYLAAFVVGSAVAWGIVTVSIK 30 +DFVIQW YL AF+ GSAVAW +VT+SIK Sbjct: 1 MDFVIQWSCYLLAFLGGSAVAWVVVTLSIK 30 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.326 0.133 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 232,128,892 Number of extensions: 2841300 Number of successful extensions: 18042 Number of sequences better than 10.0: 8 Number of HSP's gapped: 18069 Number of HSP's successfully gapped: 8 Length of query: 77 Length of database: 3,846,993,858 Length adjustment: 48 Effective length of query: 29 Effective length of database: 3,305,784,114 Effective search space: 95867739306 Effective search space used: 95867739306 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 75 (33.5 bits)