BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4661 (134 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HFA2|B2HFA2_MYCMM Tax_Id=216594 (cspB)SubName: Full=Cold sh... 239 9e-62 tr|A0PKZ5|A0PKZ5_MYCUA Tax_Id=362242 (cspB)SubName: Full=Cold sh... 238 2e-61 tr|Q742M5|Q742M5_MYCPA Tax_Id=1770 (cspB)SubName: Full=CspB;[Myc... 226 8e-58 tr|A0QBH1|A0QBH1_MYCA1 Tax_Id=243243 SubName: Full='Cold-shock' ... 224 2e-57 tr|A1TF67|A1TF67_MYCVP Tax_Id=350058 SubName: Full=Cold-shock DN... 223 4e-57 tr|O33052|O33052_MYCLE Tax_Id=1769 (cspA)SubName: Full=Probable ... 219 8e-56 tr|B8ZSS0|B8ZSS0_MYCLB Tax_Id=561304 (cspB)SubName: Full=Probabl... 219 8e-56 tr|A4T7B7|A4T7B7_MYCGI Tax_Id=350054 SubName: Full=Cold-shock DN... 216 9e-55 tr|C6DWM4|C6DWM4_MYCTK Tax_Id=478434 SubName: Full=Cold shock pr... 215 1e-54 tr|A5WKP2|A5WKP2_MYCTF Tax_Id=336982 SubName: Full=Cold shock pr... 215 1e-54 tr|A2VGG7|A2VGG7_MYCTU Tax_Id=348776 SubName: Full=Cold shock-li... 215 1e-54 tr|A0R441|A0R441_MYCS2 Tax_Id=246196 SubName: Full='Cold-shock' ... 214 2e-54 tr|Q7U126|Q7U126_MYCBO Tax_Id=1765 (cspB)SubName: Full=PROBABLE ... 214 3e-54 tr|O53883|O53883_MYCTU Tax_Id=1773 (cspB)SubName: Full=Cold-shoc... 214 3e-54 tr|C1ALK5|C1ALK5_MYCBT Tax_Id=561275 (cspB)SubName: Full=Putativ... 214 3e-54 tr|A5U0Q9|A5U0Q9_MYCTA Tax_Id=419947 (cspB)SubName: Full=Cold-sh... 214 3e-54 tr|A1KH03|A1KH03_MYCBP Tax_Id=410289 (cspB)SubName: Full=Probabl... 214 3e-54 tr|Q1B3F5|Q1B3F5_MYCSS Tax_Id=164756 SubName: Full=Cold-shock DN... 211 2e-53 tr|A4KFH7|A4KFH7_MYCTU Tax_Id=395095 SubName: Full=Cold shock-li... 210 4e-53 tr|A3Q646|A3Q646_MYCSJ Tax_Id=164757 SubName: Full=Cold-shock DN... 210 5e-53 tr|A1ULP5|A1ULP5_MYCSK Tax_Id=189918 SubName: Full=Cold-shock DN... 210 5e-53 tr|B1MJ10|B1MJ10_MYCA9 Tax_Id=561007 SubName: Full=Probable cold... 203 4e-51 tr|C3JDZ8|C3JDZ8_RHOER Tax_Id=596309 SubName: Full=Cold-shock DN... 203 4e-51 tr|C0ZMT5|C0ZMT5_RHOE4 Tax_Id=234621 SubName: Full=Probable cold... 202 1e-50 tr|C1ATL4|C1ATL4_RHOOB Tax_Id=632772 SubName: Full=Cold shock pr... 199 1e-49 tr|Q0S6U1|Q0S6U1_RHOSR Tax_Id=101510 SubName: Full=Probable cold... 197 2e-49 tr|D0L5K3|D0L5K3_GORB4 Tax_Id=526226 SubName: Full=Cold-shock pr... 194 2e-48 tr|Q5Z257|Q5Z257_NOCFA Tax_Id=37329 SubName: Full=Putative cold ... 188 1e-46 tr|C2ALJ0|C2ALJ0_TSUPA Tax_Id=521096 SubName: Full=Cold-shock DN... 164 4e-39 tr|C7N0G6|C7N0G6_SACVD Tax_Id=471857 SubName: Full=Cold-shock DN... 162 1e-38 tr|A4F7B5|A4F7B5_SACEN Tax_Id=405948 SubName: Full=Cold-shock DN... 160 3e-38 tr|C6WHZ7|C6WHZ7_ACTMD Tax_Id=446462 SubName: Full=Cold-shock DN... 155 1e-36 tr|Q2J4M0|Q2J4M0_FRASC Tax_Id=106370 SubName: Full=Cold-shock DN... 149 8e-35 tr|Q0RB22|Q0RB22_FRAAA Tax_Id=326424 (csp)SubName: Full=CspB;[Fr... 149 1e-34 tr|C8X804|C8X804_NAKMY Tax_Id=479431 SubName: Full=Cold-shock DN... 145 2e-33 tr|A8M552|A8M552_SALAI Tax_Id=391037 SubName: Full=Cold-shock DN... 140 5e-32 tr|A8LCH4|A8LCH4_FRASN Tax_Id=298653 SubName: Full=Cold-shock DN... 139 1e-31 tr|A4XBS0|A4XBS0_SALTO Tax_Id=369723 SubName: Full=Cold-shock DN... 139 1e-31 tr|C4RLR7|C4RLR7_9ACTO Tax_Id=219305 SubName: Full=Cold-shock pr... 139 1e-31 tr|C5VB84|C5VB84_9CORY Tax_Id=553207 SubName: Full=Cold-shock DN... 138 2e-31 tr|C0E836|C0E836_9CORY Tax_Id=566549 SubName: Full=Putative unch... 138 2e-31 tr|C0WEX3|C0WEX3_9CORY Tax_Id=525260 SubName: Full=Cold shock pr... 136 7e-31 tr|C3PEV2|C3PEV2_CORA7 Tax_Id=548476 (cspB)SubName: Full=Cold sh... 135 1e-30 tr|Q8FR69|Q8FR69_COREF Tax_Id=152794 SubName: Full=Putative cold... 135 1e-30 tr|C6R9W2|C6R9W2_9CORY Tax_Id=553206 SubName: Full=Cold-shock DN... 135 1e-30 tr|C2BPY5|C2BPY5_9CORY Tax_Id=525264 SubName: Full=Cold shock pr... 135 1e-30 tr|C0XQC4|C0XQC4_9CORY Tax_Id=525263 SubName: Full=Cold shock pr... 135 2e-30 tr|C2CMA6|C2CMA6_CORST Tax_Id=525268 SubName: Full=Cold shock pr... 134 3e-30 tr|C4LHA6|C4LHA6_CORK4 Tax_Id=645127 (cspB)SubName: Full=Cold sh... 134 3e-30 tr|C8NW83|C8NW83_9CORY Tax_Id=585529 (cspB)SubName: Full=Cold-sh... 134 3e-30 >tr|B2HFA2|B2HFA2_MYCMM Tax_Id=216594 (cspB)SubName: Full=Cold shock-like protein B CspB;[Mycobacterium marinum] Length = 134 Score = 239 bits (609), Expect = 9e-62 Identities = 121/134 (90%), Positives = 122/134 (91%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQA Sbjct: 1 MPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 TRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR Sbjct: 61 SLKLLDPPPSLTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 Query: 121 VSEVVKAVARELDA 134 VSEVVKAVARELDA Sbjct: 121 VSEVVKAVARELDA 134 >tr|A0PKZ5|A0PKZ5_MYCUA Tax_Id=362242 (cspB)SubName: Full=Cold shock-like protein B CspB;[Mycobacterium ulcerans] Length = 184 Score = 238 bits (607), Expect = 2e-61 Identities = 121/134 (90%), Positives = 121/134 (90%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQA Sbjct: 51 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 TRTR EAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR Sbjct: 111 SLKLLDPPPSLTRTRHEAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 170 Query: 121 VSEVVKAVARELDA 134 VSEVVKAVARELDA Sbjct: 171 VSEVVKAVARELDA 184 >tr|Q742M5|Q742M5_MYCPA Tax_Id=1770 (cspB)SubName: Full=CspB;[Mycobacterium paratuberculosis] Length = 138 Score = 226 bits (575), Expect = 8e-58 Identities = 115/135 (85%), Positives = 119/135 (88%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 VPTGKVKWYD+DKGFGFLSQE+GEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQA Sbjct: 4 VPTGKVKWYDADKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAL 63 Query: 61 XXXXXXXXXXXTRTRREA-VEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 T+ RRE EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 64 SLKLIEPPPSLTKARREGPAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 123 Query: 120 RVSEVVKAVARELDA 134 RVSEVV+AVARELDA Sbjct: 124 RVSEVVRAVARELDA 138 >tr|A0QBH1|A0QBH1_MYCA1 Tax_Id=243243 SubName: Full='Cold-shock' DNA-binding domain;[Mycobacterium avium] Length = 135 Score = 224 bits (572), Expect = 2e-57 Identities = 114/135 (84%), Positives = 119/135 (88%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD+DKGFGFLSQE+GEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQA Sbjct: 1 MPTGKVKWYDADKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREA-VEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 T+ RRE EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 61 SLKLIEPPPSLTKARREGPAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 120 Query: 120 RVSEVVKAVARELDA 134 RVSEVV+AVARELDA Sbjct: 121 RVSEVVRAVARELDA 135 >tr|A1TF67|A1TF67_MYCVP Tax_Id=350058 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium vanbaalenii] Length = 136 Score = 223 bits (569), Expect = 4e-57 Identities = 113/136 (83%), Positives = 120/136 (88%), Gaps = 2/136 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTG+VKWYD++KGFGFLSQE+GEDVYVRSSALPAGVEGLKAGQRVEFG+A+GRRGPQA Sbjct: 1 MPTGRVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRRE--AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 TRTRRE AVEHKHSPDELHGMVEDMITLLES VQPELRKGRYPDRK A Sbjct: 61 SLKLIDPPPSLTRTRREAAAVEHKHSPDELHGMVEDMITLLESAVQPELRKGRYPDRKVA 120 Query: 119 RRVSEVVKAVARELDA 134 RRVSEVVKAVARELDA Sbjct: 121 RRVSEVVKAVARELDA 136 >tr|O33052|O33052_MYCLE Tax_Id=1769 (cspA)SubName: Full=Probable cold shock protein; SubName: Full=Small cold-shock protein;[Mycobacterium leprae] Length = 136 Score = 219 bits (558), Expect = 8e-56 Identities = 113/136 (83%), Positives = 119/136 (87%), Gaps = 2/136 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD+DKGFGFLSQE+GEDVYVRSSALPAGVEGLKAGQRVEFG+ASGRRGPQA Sbjct: 1 MPTGKVKWYDADKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVASGRRGPQAL 60 Query: 61 XXXXXXXXXXXTR-TRREAV-EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 R RREA+ EH+HSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA Sbjct: 61 SLKLIDPPPSFARQVRREALAEHRHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 120 Query: 119 RRVSEVVKAVARELDA 134 RRVSEVVKAVARE DA Sbjct: 121 RRVSEVVKAVAREFDA 136 >tr|B8ZSS0|B8ZSS0_MYCLB Tax_Id=561304 (cspB)SubName: Full=Probable cold shock protein;[Mycobacterium leprae] Length = 136 Score = 219 bits (558), Expect = 8e-56 Identities = 113/136 (83%), Positives = 119/136 (87%), Gaps = 2/136 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD+DKGFGFLSQE+GEDVYVRSSALPAGVEGLKAGQRVEFG+ASGRRGPQA Sbjct: 1 MPTGKVKWYDADKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVASGRRGPQAL 60 Query: 61 XXXXXXXXXXXTR-TRREAV-EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 R RREA+ EH+HSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA Sbjct: 61 SLKLIDPPPSFARQVRREALAEHRHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 120 Query: 119 RRVSEVVKAVARELDA 134 RRVSEVVKAVARE DA Sbjct: 121 RRVSEVVKAVAREFDA 136 >tr|A4T7B7|A4T7B7_MYCGI Tax_Id=350054 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium gilvum] Length = 136 Score = 216 bits (549), Expect = 9e-55 Identities = 108/136 (79%), Positives = 117/136 (86%), Gaps = 2/136 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTG+VKWYD++KGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFG+A+GRRGPQA Sbjct: 1 MPTGRVKWYDAEKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGVAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRRE--AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 +R RRE A EHKH+PDELHGMVEDMITLLE VQPELRKG+YPDRK A Sbjct: 61 QVKLIDPPPSVSRNRREAAAAEHKHTPDELHGMVEDMITLLEGAVQPELRKGKYPDRKVA 120 Query: 119 RRVSEVVKAVARELDA 134 RRVSEVVKAVARELDA Sbjct: 121 RRVSEVVKAVARELDA 136 >tr|C6DWM4|C6DWM4_MYCTK Tax_Id=478434 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis] Length = 138 Score = 215 bits (547), Expect = 1e-54 Identities = 110/135 (81%), Positives = 115/135 (85%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 VPTGKVKWYD DKGFGFLSQE GEDVYVRSSALP GVE LKAGQRVEFGIASGRRGPQA Sbjct: 4 VPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 63 Query: 61 XXXXXXXXXXXTRTRRE-AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 +R RRE A EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 64 SLRLIEPPPSLSRPRREPAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 123 Query: 120 RVSEVVKAVARELDA 134 RV+EVV+AVARE ++ Sbjct: 124 RVAEVVRAVAREFES 138 >tr|A5WKP2|A5WKP2_MYCTF Tax_Id=336982 SubName: Full=Cold shock protein B cspB;[Mycobacterium tuberculosis] Length = 138 Score = 215 bits (547), Expect = 1e-54 Identities = 110/135 (81%), Positives = 115/135 (85%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 VPTGKVKWYD DKGFGFLSQE GEDVYVRSSALP GVE LKAGQRVEFGIASGRRGPQA Sbjct: 4 VPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 63 Query: 61 XXXXXXXXXXXTRTRRE-AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 +R RRE A EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 64 SLRLIEPPPSLSRPRREPAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 123 Query: 120 RVSEVVKAVARELDA 134 RV+EVV+AVARE ++ Sbjct: 124 RVAEVVRAVAREFES 138 >tr|A2VGG7|A2VGG7_MYCTU Tax_Id=348776 SubName: Full=Cold shock-like protein B cspB;[Mycobacterium tuberculosis C] Length = 138 Score = 215 bits (547), Expect = 1e-54 Identities = 110/135 (81%), Positives = 115/135 (85%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 VPTGKVKWYD DKGFGFLSQE GEDVYVRSSALP GVE LKAGQRVEFGIASGRRGPQA Sbjct: 4 VPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 63 Query: 61 XXXXXXXXXXXTRTRRE-AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 +R RRE A EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 64 SLRLIEPPPSLSRPRREPAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 123 Query: 120 RVSEVVKAVARELDA 134 RV+EVV+AVARE ++ Sbjct: 124 RVAEVVRAVAREFES 138 >tr|A0R441|A0R441_MYCS2 Tax_Id=246196 SubName: Full='Cold-shock' DNA-binding domain protein;[Mycobacterium smegmatis] Length = 149 Score = 214 bits (545), Expect = 2e-54 Identities = 108/136 (79%), Positives = 117/136 (86%), Gaps = 2/136 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 VPTGKVKWYD++KGFGFLSQE+GEDVYVRSSALPAGVE LK+GQRVEFG+A+GRRGPQA Sbjct: 14 VPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEALKSGQRVEFGVAAGRRGPQAL 73 Query: 61 XXXXXXXXXXXTRTRREA--VEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 +R RREA EHKH+PDELHGMVEDMITLLES VQPELRKGRYPDRK A Sbjct: 74 SLKLIDPPPSLSRARREAERPEHKHTPDELHGMVEDMITLLESAVQPELRKGRYPDRKVA 133 Query: 119 RRVSEVVKAVARELDA 134 RRVSEVV+AVARELDA Sbjct: 134 RRVSEVVRAVARELDA 149 >tr|Q7U126|Q7U126_MYCBO Tax_Id=1765 (cspB)SubName: Full=PROBABLE COLD SHOCK-LIKE PROTEIN B CSPB;[Mycobacterium bovis] Length = 135 Score = 214 bits (544), Expect = 3e-54 Identities = 109/135 (80%), Positives = 115/135 (85%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD DKGFGFLSQE GEDVYVRSSALP GVE LKAGQRVEFGIASGRRGPQA Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRRE-AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 +R RRE A EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 61 SLRLIEPPPSLSRPRREPAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 120 Query: 120 RVSEVVKAVARELDA 134 RV+EVV+AVARE ++ Sbjct: 121 RVAEVVRAVAREFES 135 >tr|O53883|O53883_MYCTU Tax_Id=1773 (cspB)SubName: Full=Cold-shock domain family protein; SubName: Full=PROBABLE COLD SHOCK-LIKE PROTEIN B CSPB;[Mycobacterium tuberculosis] Length = 135 Score = 214 bits (544), Expect = 3e-54 Identities = 109/135 (80%), Positives = 115/135 (85%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD DKGFGFLSQE GEDVYVRSSALP GVE LKAGQRVEFGIASGRRGPQA Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRRE-AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 +R RRE A EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 61 SLRLIEPPPSLSRPRREPAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 120 Query: 120 RVSEVVKAVARELDA 134 RV+EVV+AVARE ++ Sbjct: 121 RVAEVVRAVAREFES 135 >tr|C1ALK5|C1ALK5_MYCBT Tax_Id=561275 (cspB)SubName: Full=Putative cold shock-like protein B;[Mycobacterium bovis] Length = 135 Score = 214 bits (544), Expect = 3e-54 Identities = 109/135 (80%), Positives = 115/135 (85%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD DKGFGFLSQE GEDVYVRSSALP GVE LKAGQRVEFGIASGRRGPQA Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRRE-AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 +R RRE A EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 61 SLRLIEPPPSLSRPRREPAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 120 Query: 120 RVSEVVKAVARELDA 134 RV+EVV+AVARE ++ Sbjct: 121 RVAEVVRAVAREFES 135 >tr|A5U0Q9|A5U0Q9_MYCTA Tax_Id=419947 (cspB)SubName: Full=Cold-shock domain family protein;[Mycobacterium tuberculosis] Length = 135 Score = 214 bits (544), Expect = 3e-54 Identities = 109/135 (80%), Positives = 115/135 (85%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD DKGFGFLSQE GEDVYVRSSALP GVE LKAGQRVEFGIASGRRGPQA Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRRE-AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 +R RRE A EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 61 SLRLIEPPPSLSRPRREPAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 120 Query: 120 RVSEVVKAVARELDA 134 RV+EVV+AVARE ++ Sbjct: 121 RVAEVVRAVAREFES 135 >tr|A1KH03|A1KH03_MYCBP Tax_Id=410289 (cspB)SubName: Full=Probable cold shock-like protein B cspB;[Mycobacterium bovis] Length = 135 Score = 214 bits (544), Expect = 3e-54 Identities = 109/135 (80%), Positives = 115/135 (85%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD DKGFGFLSQE GEDVYVRSSALP GVE LKAGQRVEFGIASGRRGPQA Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTGVEALKAGQRVEFGIASGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRRE-AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 +R RRE A EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 61 SLRLIEPPPSLSRPRREPAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 120 Query: 120 RVSEVVKAVARELDA 134 RV+EVV+AVARE ++ Sbjct: 121 RVAEVVRAVAREFES 135 >tr|Q1B3F5|Q1B3F5_MYCSS Tax_Id=164756 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium sp.] Length = 147 Score = 211 bits (537), Expect = 2e-53 Identities = 104/136 (76%), Positives = 118/136 (86%), Gaps = 2/136 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 VPTG+VKWYD++KGFGFLSQE+GEDVYVRSSALPAGVEGLKAGQRVEFG+A+GRRGPQA Sbjct: 12 VPTGRVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVAAGRRGPQAL 71 Query: 61 XXXXXXXXXXXTRTRREA--VEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 ++TRREA EHKH+PDELHGM+ D+ITLLES +QP+L+KGRYPDRK A Sbjct: 72 SLTLIDPPPSLSKTRREAERPEHKHTPDELHGMIGDLITLLESAIQPDLQKGRYPDRKVA 131 Query: 119 RRVSEVVKAVARELDA 134 RRVSEVVKAVARELDA Sbjct: 132 RRVSEVVKAVARELDA 147 >tr|A4KFH7|A4KFH7_MYCTU Tax_Id=395095 SubName: Full=Cold shock-like protein B cspB;[Mycobacterium tuberculosis str. Haarlem] Length = 135 Score = 210 bits (535), Expect = 4e-53 Identities = 108/135 (80%), Positives = 114/135 (84%), Gaps = 1/135 (0%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD DKGFGFLSQE GEDVYVRSSALP VE LKAGQRVEFGIASGRRGPQA Sbjct: 1 MPTGKVKWYDPDKGFGFLSQEGGEDVYVRSSALPTFVEALKAGQRVEFGIASGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRRE-AVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 +R RRE A EHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR Sbjct: 61 SLRLIEPPPSLSRPRREPAAEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 120 Query: 120 RVSEVVKAVARELDA 134 RV+EVV+AVARE ++ Sbjct: 121 RVAEVVRAVAREFES 135 >tr|A3Q646|A3Q646_MYCSJ Tax_Id=164757 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium sp.] Length = 136 Score = 210 bits (534), Expect = 5e-53 Identities = 103/136 (75%), Positives = 118/136 (86%), Gaps = 2/136 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTG+VKWYD++KGFGFLSQE+GEDVYVRSSALPAGVEGLKAGQRVEFG+A+GRRGPQA Sbjct: 1 MPTGRVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREA--VEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 ++TRREA EHKH+PDELHGM+ D+ITLLES +QP+L+KGRYPDRK A Sbjct: 61 SLTLIDPPPSLSKTRREAERPEHKHTPDELHGMIGDLITLLESAIQPDLQKGRYPDRKVA 120 Query: 119 RRVSEVVKAVARELDA 134 RRVSEVVKAVARELDA Sbjct: 121 RRVSEVVKAVARELDA 136 >tr|A1ULP5|A1ULP5_MYCSK Tax_Id=189918 SubName: Full=Cold-shock DNA-binding protein family;[Mycobacterium sp.] Length = 136 Score = 210 bits (534), Expect = 5e-53 Identities = 103/136 (75%), Positives = 118/136 (86%), Gaps = 2/136 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTG+VKWYD++KGFGFLSQE+GEDVYVRSSALPAGVEGLKAGQRVEFG+A+GRRGPQA Sbjct: 1 MPTGRVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQRVEFGVAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREA--VEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 ++TRREA EHKH+PDELHGM+ D+ITLLES +QP+L+KGRYPDRK A Sbjct: 61 SLTLIDPPPSLSKTRREAERPEHKHTPDELHGMIGDLITLLESAIQPDLQKGRYPDRKVA 120 Query: 119 RRVSEVVKAVARELDA 134 RRVSEVVKAVARELDA Sbjct: 121 RRVSEVVKAVARELDA 136 >tr|B1MJ10|B1MJ10_MYCA9 Tax_Id=561007 SubName: Full=Probable cold shock-like protein B CspB;[Mycobacterium abscessus] Length = 137 Score = 203 bits (517), Expect = 4e-51 Identities = 102/137 (74%), Positives = 115/137 (83%), Gaps = 3/137 (2%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD++KGFGFLSQE+GEDVYVRSSALPAGVEGLKAGQ+VEFG+A+GRRGPQA Sbjct: 1 MPTGKVKWYDAEKGFGFLSQEDGEDVYVRSSALPAGVEGLKAGQKVEFGMAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREA---VEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKT 117 +TRRE+ V HKH+ DELHGM+EDMITLLE TVQ ELRKGRYPDRK Sbjct: 61 SLKLIDAPPSVQKTRRESSGPVNHKHTTDELHGMIEDMITLLEGTVQTELRKGRYPDRKI 120 Query: 118 ARRVSEVVKAVARELDA 134 AR+VSEVV+AVA ELDA Sbjct: 121 ARKVSEVVRAVASELDA 137 >tr|C3JDZ8|C3JDZ8_RHOER Tax_Id=596309 SubName: Full=Cold-shock DNA-binding domain protein;[Rhodococcus erythropolis SK121] Length = 140 Score = 203 bits (517), Expect = 4e-51 Identities = 102/136 (75%), Positives = 114/136 (83%), Gaps = 3/136 (2%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQA- 59 VPTGKVKWYD +KGFGFLSQEEGEDVYVR+SALP GVEGLKAGQRVEFG+A+GRRGPQA Sbjct: 4 VPTGKVKWYDVEKGFGFLSQEEGEDVYVRASALPEGVEGLKAGQRVEFGMAAGRRGPQAL 63 Query: 60 --XXXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKT 117 T TRRE VE KH+PD+LHGMVEDMITLLE+ VQP+LR G+YPDRKT Sbjct: 64 SLKVLEPAPSLRGATATRREPVERKHTPDQLHGMVEDMITLLEAKVQPDLRNGKYPDRKT 123 Query: 118 ARRVSEVVKAVARELD 133 A+R+SEVV+AVARELD Sbjct: 124 AQRISEVVRAVARELD 139 >tr|C0ZMT5|C0ZMT5_RHOE4 Tax_Id=234621 SubName: Full=Probable cold shock protein;[Rhodococcus erythropolis] Length = 137 Score = 202 bits (514), Expect = 1e-50 Identities = 101/136 (74%), Positives = 114/136 (83%), Gaps = 3/136 (2%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQA- 59 +PTGKVKWYD +KGFGFLSQEEGEDVYVR+SALP GVEGLKAGQRVEFG+A+GRRGPQA Sbjct: 1 MPTGKVKWYDVEKGFGFLSQEEGEDVYVRASALPEGVEGLKAGQRVEFGMAAGRRGPQAL 60 Query: 60 --XXXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKT 117 T TRRE VE KH+PD+LHGMVEDMITLLE+ VQP+LR G+YPDRKT Sbjct: 61 SLKVLEPAPSLRGATATRREPVERKHTPDQLHGMVEDMITLLEAKVQPDLRNGKYPDRKT 120 Query: 118 ARRVSEVVKAVARELD 133 A+R+SEVV+AVARELD Sbjct: 121 AQRISEVVRAVARELD 136 >tr|C1ATL4|C1ATL4_RHOOB Tax_Id=632772 SubName: Full=Cold shock protein;[Rhodococcus opacus] Length = 139 Score = 199 bits (505), Expect = 1e-49 Identities = 100/136 (73%), Positives = 113/136 (83%), Gaps = 2/136 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 VPTGKVKWYD +KGFGFLSQEEGEDVYVRSSALP GVEGLKAGQRVEFG+A+GRRGPQA Sbjct: 4 VPTGKVKWYDVEKGFGFLSQEEGEDVYVRSSALPEGVEGLKAGQRVEFGMAAGRRGPQAL 63 Query: 61 XXXXXXXXXXXTR--TRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 + R+E KH+PDELHGMVEDMITLLE+ VQP+LRKG+YPDRKTA Sbjct: 64 SLKVLDPAPSLRQNAARKEPSAKKHTPDELHGMVEDMITLLEAKVQPDLRKGKYPDRKTA 123 Query: 119 RRVSEVVKAVARELDA 134 +R+SEVV+AVARELD+ Sbjct: 124 QRISEVVRAVARELDS 139 >tr|Q0S6U1|Q0S6U1_RHOSR Tax_Id=101510 SubName: Full=Probable cold shock protein;[Rhodococcus sp.] Length = 136 Score = 197 bits (502), Expect = 2e-49 Identities = 99/136 (72%), Positives = 113/136 (83%), Gaps = 2/136 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD +KGFGFLSQEEGEDVYVRSSALP GVEGLKAGQRVEFG+A+GRRGPQA Sbjct: 1 MPTGKVKWYDVEKGFGFLSQEEGEDVYVRSSALPEGVEGLKAGQRVEFGMAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTR--TRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTA 118 + R+E KH+PDELHGMVEDMITLLE+ VQP+LRKG+YPDRKTA Sbjct: 61 SLKVLDPAPSLRQNAARKEPSAKKHTPDELHGMVEDMITLLEAKVQPDLRKGKYPDRKTA 120 Query: 119 RRVSEVVKAVARELDA 134 +R+SEVV+AVARELD+ Sbjct: 121 QRISEVVRAVARELDS 136 >tr|D0L5K3|D0L5K3_GORB4 Tax_Id=526226 SubName: Full=Cold-shock protein DNA-binding protein;[Gordonia bronchialis] Length = 155 Score = 194 bits (494), Expect = 2e-48 Identities = 97/136 (71%), Positives = 110/136 (80%), Gaps = 3/136 (2%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 VPTGKVKWYD++KGFGFL+QE+GEDVYVRSSALP GVEGLK GQRVEFG+A+GRRGPQA Sbjct: 19 VPTGKVKWYDAEKGFGFLAQEDGEDVYVRSSALPDGVEGLKPGQRVEFGMAAGRRGPQAL 78 Query: 61 XXXXXXXXXXXTRTRREAVE---HKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKT 117 + REA +HSPDELHGMV D+ITLLE VQP+LRKGRYPDRKT Sbjct: 79 SVTVLEPAPSVAKNTREAARKEVKRHSPDELHGMVADLITLLEGKVQPDLRKGRYPDRKT 138 Query: 118 ARRVSEVVKAVARELD 133 A+R+SEVV+AVARELD Sbjct: 139 AQRISEVVRAVARELD 154 >tr|Q5Z257|Q5Z257_NOCFA Tax_Id=37329 SubName: Full=Putative cold shock protein;[Nocardia farcinica] Length = 138 Score = 188 bits (478), Expect = 1e-46 Identities = 96/137 (70%), Positives = 109/137 (79%), Gaps = 4/137 (2%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQA- 59 +PTG+VKWYD +KGFGFLSQ+EGEDVYVRSSALP GVEGLK GQRVEFG+A+GRRGPQA Sbjct: 1 MPTGRVKWYDVEKGFGFLSQDEGEDVYVRSSALPEGVEGLKPGQRVEFGMAAGRRGPQAL 60 Query: 60 ---XXXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRK 116 R R+E + +PDELHGMVEDMITLLE+ VQP+LRKGRYPDRK Sbjct: 61 SLKLIEAPPSLRQGQDRGRKEPSGPRRTPDELHGMVEDMITLLETKVQPDLRKGRYPDRK 120 Query: 117 TARRVSEVVKAVARELD 133 TAR +SEVV+AVARELD Sbjct: 121 TARTISEVVRAVARELD 137 >tr|C2ALJ0|C2ALJ0_TSUPA Tax_Id=521096 SubName: Full=Cold-shock DNA-binding protein family;[Tsukamurella paurometabola DSM 20162] Length = 139 Score = 164 bits (414), Expect = 4e-39 Identities = 83/140 (59%), Positives = 104/140 (74%), Gaps = 7/140 (5%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD++KGFGFLSQE GEDVYVRSSALP+G + LK GQRVEF +A+GRRGPQA Sbjct: 1 MPTGKVKWYDAEKGFGFLSQEGGEDVYVRSSALPSGTDELKQGQRVEFSMAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXT------RTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPD 114 RTRR A ++ DELHGM+EDMI LL+ +VQ ELRKGRYPD Sbjct: 61 TVTVLEPAPSVARGGAAQRTRRPAA-NRRPADELHGMIEDMIQLLDGSVQQELRKGRYPD 119 Query: 115 RKTARRVSEVVKAVARELDA 134 RK + ++++V++ +ARELD+ Sbjct: 120 RKASEQIAKVLREIARELDS 139 >tr|C7N0G6|C7N0G6_SACVD Tax_Id=471857 SubName: Full=Cold-shock DNA-binding protein family;[Saccharomonospora viridis] Length = 128 Score = 162 bits (410), Expect = 1e-38 Identities = 80/133 (60%), Positives = 97/133 (72%), Gaps = 6/133 (4%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKWYD+DKGFGF++++ G DVYVR SALP GVE LKAGQR+EFGIA GRRGPQA Sbjct: 1 MPTGKVKWYDADKGFGFVTEDGGRDVYVRKSALPQGVETLKAGQRLEFGIAEGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 RR E ELHG++EDMI LLE VQP LR+GRYP+RK +R Sbjct: 61 SVRLLDPLPSVAEARRRPAE------ELHGLIEDMIKLLEMRVQPVLRRGRYPERKNTKR 114 Query: 121 VSEVVKAVARELD 133 ++EV++AVAR+LD Sbjct: 115 IAEVMRAVARDLD 127 >tr|A4F7B5|A4F7B5_SACEN Tax_Id=405948 SubName: Full=Cold-shock DNA-binding domain protein;[Saccharopolyspora erythraea] Length = 130 Score = 160 bits (406), Expect = 3e-38 Identities = 79/133 (59%), Positives = 98/133 (73%), Gaps = 6/133 (4%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTG+VKW+D++KGFGF++Q+ GEDVYVR+SALP+GVE LK GQRV+F +A GRRGPQA Sbjct: 1 MPTGRVKWFDAEKGFGFVTQDGGEDVYVRASALPSGVESLKTGQRVDFDMAQGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 RR DELHGMV+DMI LLE V P+LR+GRYPDRK ++R Sbjct: 61 KVQLLDPPPSVVEARRRPA------DELHGMVDDMIKLLELKVLPDLRRGRYPDRKVSKR 114 Query: 121 VSEVVKAVARELD 133 + EVV+AVARELD Sbjct: 115 IGEVVRAVARELD 127 >tr|C6WHZ7|C6WHZ7_ACTMD Tax_Id=446462 SubName: Full=Cold-shock DNA-binding domain protein;[Actinosynnema mirum] Length = 131 Score = 155 bits (392), Expect = 1e-36 Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 6/133 (4%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 VPTGKVKWYDS+KGFGF++Q+ GEDVYVR SALP GV+ LKAGQR+EFG+A GRRGPQA Sbjct: 4 VPTGKVKWYDSEKGFGFVTQDGGEDVYVRKSALPEGVDALKAGQRIEFGMAEGRRGPQAL 63 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 RR DEL+ ++ED+I LLE VQPELR+ RYP+RK+A+ Sbjct: 64 SVRLVDPAPSVAEARRRPA------DELNVVIEDLIRLLEQRVQPELRRSRYPERKSAKL 117 Query: 121 VSEVVKAVARELD 133 V++ ++A+AR+LD Sbjct: 118 VADALRAIARDLD 130 >tr|Q2J4M0|Q2J4M0_FRASC Tax_Id=106370 SubName: Full=Cold-shock DNA-binding protein family;[Frankia sp.] Length = 131 Score = 149 bits (377), Expect = 8e-35 Identities = 76/133 (57%), Positives = 98/133 (73%), Gaps = 3/133 (2%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKW+D DKGFGFLS+++G DV+V +ALPAGV+ LK G RVEFG+A+GRRG QA Sbjct: 1 MPTGKVKWFDVDKGFGFLSRDDGGDVFVHKAALPAGVDRLKPGDRVEFGVAAGRRGDQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 + +A + SPDELH MVEDMI +L+ VQ +LR+GRYPDR+TA+R Sbjct: 61 SVRLLTAPPSVAKAAAQAA--RRSPDELHSMVEDMIKVLDD-VQRDLRRGRYPDRRTAQR 117 Query: 121 VSEVVKAVARELD 133 V++VV AVA EL+ Sbjct: 118 VAKVVHAVANELE 130 >tr|Q0RB22|Q0RB22_FRAAA Tax_Id=326424 (csp)SubName: Full=CspB;[Frankia alni] Length = 131 Score = 149 bits (376), Expect = 1e-34 Identities = 77/134 (57%), Positives = 97/134 (72%), Gaps = 3/134 (2%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTGKVKW+D DKGFGFLS+++G DV+V +ALPAGVE LK G RVEFG+A+GRRG QA Sbjct: 1 MPTGKVKWFDVDKGFGFLSRDDGGDVFVHKAALPAGVERLKPGDRVEFGVAAGRRGDQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 + A + SPDELH MVEDMI +L+ VQ +LR+GRYPDR+ A+R Sbjct: 61 SVRLLAAPPSVAKAAAHAA--RRSPDELHSMVEDMIKVLDD-VQRDLRRGRYPDRRIAQR 117 Query: 121 VSEVVKAVARELDA 134 V++VV AVA EL+A Sbjct: 118 VAKVVHAVANELEA 131 >tr|C8X804|C8X804_NAKMY Tax_Id=479431 SubName: Full=Cold-shock DNA-binding domain protein;[Nakamurella multipartita] Length = 129 Score = 145 bits (365), Expect = 2e-33 Identities = 73/135 (54%), Positives = 94/135 (69%), Gaps = 7/135 (5%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQA 59 +P+GK+KWYD+DKGFGF++Q+ G +DV+VRSSALPAGV LK GQ+VEFG+A GRRGPQA Sbjct: 1 MPSGKIKWYDADKGFGFIAQDGGGDDVHVRSSALPAGVATLKPGQKVEFGVADGRRGPQA 60 Query: 60 XXXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 R E ELHG+V+DMI LLES P+LR+GRYPDR Sbjct: 61 LQVKVLQAPPSVVAATRRPAE------ELHGLVDDMIKLLESKALPDLRRGRYPDRALGG 114 Query: 120 RVSEVVKAVARELDA 134 R+++V++AVA + DA Sbjct: 115 RIAQVLRAVANDFDA 129 >tr|A8M552|A8M552_SALAI Tax_Id=391037 SubName: Full=Cold-shock DNA-binding domain protein;[Salinispora arenicola] Length = 128 Score = 140 bits (353), Expect = 5e-32 Identities = 68/133 (51%), Positives = 92/133 (69%), Gaps = 6/133 (4%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTG+VKWYD+ KG+GF++ +EG DV++ +ALPAGV LK GQRV+F + RRG QA Sbjct: 1 MPTGRVKWYDATKGYGFVTSDEGGDVFLPKAALPAGVTDLKGGQRVDFSVVDSRRGAQAM 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 RR E ELHG+VEDMI +LE+ VQP LR+GR+PDRKTA++ Sbjct: 61 GVKLLEAPPSVAELRRRPAE------ELHGLVEDMIKVLEAKVQPNLRRGRFPDRKTAQK 114 Query: 121 VSEVVKAVARELD 133 ++++V AVAREL+ Sbjct: 115 IAQLVHAVARELE 127 >tr|A8LCH4|A8LCH4_FRASN Tax_Id=298653 SubName: Full=Cold-shock DNA-binding domain protein;[Frankia sp.] Length = 132 Score = 139 bits (350), Expect = 1e-31 Identities = 72/134 (53%), Positives = 97/134 (72%), Gaps = 4/134 (2%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGE-DVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQA 59 +PTGKVKW+D D+GFGFLS+++G+ DV+V +ALP+GV+ LK G RVEFGIA+GR+G QA Sbjct: 1 MPTGKVKWFDVDRGFGFLSRDDGDADVFVHKAALPSGVDRLKPGDRVEFGIAAGRKGDQA 60 Query: 60 XXXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTAR 119 + A + SPDELH MVEDMI +L+ VQ +LR+GRYPDR+ A+ Sbjct: 61 LSLRILSAPPSVAKAAANA--SRRSPDELHSMVEDMIKVLDD-VQRDLRRGRYPDRRAAQ 117 Query: 120 RVSEVVKAVARELD 133 +V++VV AVA EL+ Sbjct: 118 KVAKVVHAVANELE 131 >tr|A4XBS0|A4XBS0_SALTO Tax_Id=369723 SubName: Full=Cold-shock DNA-binding protein family;[Salinispora tropica] Length = 128 Score = 139 bits (350), Expect = 1e-31 Identities = 67/133 (50%), Positives = 92/133 (69%), Gaps = 6/133 (4%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTG+VKWYD+ KG+GF++ +EG DV++ +ALPAGV LK GQRV+F + RRG QA Sbjct: 1 MPTGRVKWYDATKGYGFVTNDEGGDVFLPKAALPAGVTDLKGGQRVDFSVVDSRRGAQAM 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 RR E ELHG+VEDMI +LE+ VQP LR+GR+PDRKT+++ Sbjct: 61 GVKLLEAPPSVAELRRRPAE------ELHGLVEDMIKVLEAKVQPNLRRGRFPDRKTSQK 114 Query: 121 VSEVVKAVARELD 133 ++++V AVAREL+ Sbjct: 115 IAQLVHAVARELE 127 >tr|C4RLR7|C4RLR7_9ACTO Tax_Id=219305 SubName: Full=Cold-shock protein, DNA-binding;[Micromonospora sp. ATCC 39149] Length = 128 Score = 139 bits (350), Expect = 1e-31 Identities = 67/133 (50%), Positives = 92/133 (69%), Gaps = 6/133 (4%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +PTG+VKWYD+ KG+GF++ +EG DV++ ALPAGV LK GQRV+F + RRG QA Sbjct: 1 MPTGRVKWYDAAKGYGFVTSDEGGDVFLPKGALPAGVTDLKGGQRVDFSVVDSRRGAQAM 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 RR E ELHG+VEDMI +LE+ VQP+LR+GR+PD+KTA++ Sbjct: 61 GVKLLEAPPSVAELRRRPAE------ELHGLVEDMIKVLEAKVQPDLRRGRFPDKKTAQK 114 Query: 121 VSEVVKAVARELD 133 ++++V AVAREL+ Sbjct: 115 IAQLVHAVARELE 127 >tr|C5VB84|C5VB84_9CORY Tax_Id=553207 SubName: Full=Cold-shock DNA-binding domain protein;[Corynebacterium matruchotii ATCC 14266] Length = 132 Score = 138 bits (348), Expect = 2e-31 Identities = 66/133 (49%), Positives = 88/133 (66%), Gaps = 2/133 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P GKVKWYD D+GFGF+S +GED YV S LP GV L GQRV+F ASG RGPQA Sbjct: 1 MPIGKVKWYDPDRGFGFISNPDGEDCYVGKSVLPHGVTELHRGQRVDFDFASGARGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 +R R+ +HK++P+EL ++ DM+T LE VQP L GRYPDRK ++ Sbjct: 61 RVKILDEPRPRSRNRQ--TKHKYTPEELGSLIADMVTTLEERVQPPLTAGRYPDRKEGKQ 118 Query: 121 VSEVVKAVARELD 133 ++E ++ +A+ELD Sbjct: 119 IAEALRIIAKELD 131 >tr|C0E836|C0E836_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 132 Score = 138 bits (348), Expect = 2e-31 Identities = 66/133 (49%), Positives = 88/133 (66%), Gaps = 2/133 (1%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P GKVKWYD D+GFGF+S +GED YV S LP GV L GQRV+F ASG RGPQA Sbjct: 1 MPIGKVKWYDPDRGFGFISNPDGEDCYVGKSVLPHGVTELHRGQRVDFDFASGARGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 +R R+ +HK++P+EL ++ DM+T LE VQP L GRYPDRK ++ Sbjct: 61 RVKILDEPRPRSRNRQ--TKHKYTPEELGSLIADMVTTLEERVQPPLTAGRYPDRKEGKQ 118 Query: 121 VSEVVKAVARELD 133 ++E ++ +A+ELD Sbjct: 119 IAEALRIIAKELD 131 >tr|C0WEX3|C0WEX3_9CORY Tax_Id=525260 SubName: Full=Cold shock protein;[Corynebacterium accolens ATCC 49725] Length = 126 Score = 136 bits (343), Expect = 7e-31 Identities = 68/134 (50%), Positives = 91/134 (67%), Gaps = 8/134 (5%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P GKVKWYD++KGFGF+S EDVYV + LP GVE + GQR+EF A+GRRGPQA Sbjct: 1 MPIGKVKWYDAEKGFGFVSNPGDEDVYVGRNVLPKGVEEIFPGQRIEFDFAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 T +R+ P+EL MV D++TLLES VQP L GRYP+RKT R+ Sbjct: 61 RVRVLDKPRRRTPSRK--------PEELGSMVSDVMTLLESQVQPVLNSGRYPERKTGRQ 112 Query: 121 VSEVVKAVARELDA 134 V+E+++A+A++LD+ Sbjct: 113 VAEILRAIAKDLDS 126 >tr|C3PEV2|C3PEV2_CORA7 Tax_Id=548476 (cspB)SubName: Full=Cold shock protein;[Corynebacterium aurimucosum] Length = 126 Score = 135 bits (341), Expect = 1e-30 Identities = 67/134 (50%), Positives = 91/134 (67%), Gaps = 8/134 (5%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P GKVKWYD+DKGFGF+S EDVYV + LP GV+ L GQR+EF A+GRRGPQA Sbjct: 1 MPIGKVKWYDADKGFGFVSNPGDEDVYVGRNVLPKGVDELHQGQRIEFDFAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 T R+ P+EL M+ D++TLLE+ VQP L +GRYP+RKT R+ Sbjct: 61 RVKVLDVPRRRTPARK--------PEELASMLSDVMTLLETQVQPVLSQGRYPERKTGRQ 112 Query: 121 VSEVVKAVARELDA 134 V+E+++A+A++LD+ Sbjct: 113 VAEILRAIAKDLDS 126 >tr|Q8FR69|Q8FR69_COREF Tax_Id=152794 SubName: Full=Putative cold shock protein;[Corynebacterium efficiens] Length = 127 Score = 135 bits (340), Expect = 1e-30 Identities = 64/134 (47%), Positives = 88/134 (65%), Gaps = 7/134 (5%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P G VKWYD ++GFGF+S GED +V LP GV L GQR+EF A+GR+GPQA Sbjct: 1 MPVGTVKWYDPERGFGFVSNPGGEDCFVGKQVLPKGVTELHQGQRIEFDFAAGRKGPQA- 59 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 T R +H + P+EL+G++ DM+T+LE TVQP L KG YPDRK + Sbjct: 60 ------LRVKVLETPRRRPQHTYKPEELNGIISDMVTMLEGTVQPALLKGHYPDRKVGEQ 113 Query: 121 VSEVVKAVARELDA 134 V+++++AVA+EL+A Sbjct: 114 VAKILRAVAKELEA 127 >tr|C6R9W2|C6R9W2_9CORY Tax_Id=553206 SubName: Full=Cold-shock DNA-binding domain protein;[Corynebacterium tuberculostearicum SK141] Length = 126 Score = 135 bits (340), Expect = 1e-30 Identities = 67/134 (50%), Positives = 90/134 (67%), Gaps = 8/134 (5%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P GKVKWYD++KGFGF+S EDVYV + LP GVE L GQR++F A+GRRGPQA Sbjct: 1 MPIGKVKWYDAEKGFGFVSNAGDEDVYVGRNVLPKGVEELFPGQRIDFDFAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 T R+ P+EL MV D++TLLES +QP L GRYP+RKT R+ Sbjct: 61 RVKVLDKPRRRTPARK--------PEELGSMVSDVMTLLESQIQPVLNSGRYPERKTGRQ 112 Query: 121 VSEVVKAVARELDA 134 V+E+++A+A++LD+ Sbjct: 113 VAEILRAIAKDLDS 126 >tr|C2BPY5|C2BPY5_9CORY Tax_Id=525264 SubName: Full=Cold shock protein;[Corynebacterium pseudogenitalium ATCC 33035] Length = 126 Score = 135 bits (340), Expect = 1e-30 Identities = 67/134 (50%), Positives = 90/134 (67%), Gaps = 8/134 (5%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P GKVKWYD++KGFGF+S EDVYV + LP GVE L GQR++F A+GRRGPQA Sbjct: 1 MPIGKVKWYDAEKGFGFVSNPGDEDVYVGRNVLPKGVEELFPGQRIDFDFAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 T R+ P+EL MV D++TLLES +QP L GRYP+RKT R+ Sbjct: 61 RVKVLDKPRRRTPARK--------PEELGSMVSDVMTLLESQIQPVLNSGRYPERKTGRQ 112 Query: 121 VSEVVKAVARELDA 134 V+E+++A+A++LD+ Sbjct: 113 VAEILRAIAKDLDS 126 >tr|C0XQC4|C0XQC4_9CORY Tax_Id=525263 SubName: Full=Cold shock protein;[Corynebacterium lipophiloflavum DSM 44291] Length = 127 Score = 135 bits (339), Expect = 2e-30 Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 7/133 (5%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P GKVKWYD+DKGFGF S EDV+V LP GVE L AGQR+EF A+GRRGPQA Sbjct: 1 MPVGKVKWYDADKGFGFASNPGDEDVFVGKKVLPEGVEELVAGQRIEFDFAAGRRGPQA- 59 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 T RR+ H++ P++L+ ++ DM+T+LE+ +QP L GRYPDR ++ Sbjct: 60 ----LRVKVLDTPKRRQT--HRYKPEDLNKLLADMMTVLETQIQPALEAGRYPDRAHGKQ 113 Query: 121 VSEVVKAVARELD 133 V+E+++AVA+ELD Sbjct: 114 VAEILRAVAKELD 126 >tr|C2CMA6|C2CMA6_CORST Tax_Id=525268 SubName: Full=Cold shock protein;[Corynebacterium striatum ATCC 6940] Length = 126 Score = 134 bits (338), Expect = 3e-30 Identities = 66/134 (49%), Positives = 92/134 (68%), Gaps = 8/134 (5%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P GKVKW+D+DKGFGF+S EDVYV + LP GV+ L GQR+EF A+GRRGPQA Sbjct: 1 MPIGKVKWFDADKGFGFVSNPGDEDVYVGRNVLPEGVDELVQGQRIEFDFAAGRRGPQAL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 T +R+ P+EL M+ D++TLLE+ VQP L +GRYP+RKT R+ Sbjct: 61 RVKVLDSPRRRTPSRK--------PEELSSMLSDVMTLLETQVQPVLAQGRYPERKTGRQ 112 Query: 121 VSEVVKAVARELDA 134 V+E+++A+A++LD+ Sbjct: 113 VAEILRAIAKDLDS 126 >tr|C4LHA6|C4LHA6_CORK4 Tax_Id=645127 (cspB)SubName: Full=Cold shock protein;[Corynebacterium kroppenstedtii] Length = 130 Score = 134 bits (337), Expect = 3e-30 Identities = 65/134 (48%), Positives = 90/134 (67%), Gaps = 4/134 (2%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P G+VKW+D DKGFGF++ +DV+V + LP GVE L GQ++E+ A+GR+GPQ Sbjct: 1 MPIGRVKWFDPDKGFGFVTNPGDDDVFVGTQVLPDGVEELHQGQKIEYEFAAGRKGPQVL 60 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 T R HK+ PD+L M++D++TLLE VQP L+ GRYP RK +R+ Sbjct: 61 RITDIQE----TGRPRRRPSHKYKPDQLQSMIQDLMTLLEGHVQPSLQAGRYPGRKESRQ 116 Query: 121 VSEVVKAVARELDA 134 V+EV++AVARELDA Sbjct: 117 VAEVLRAVARELDA 130 >tr|C8NW83|C8NW83_9CORY Tax_Id=585529 (cspB)SubName: Full=Cold-shock domain family protein;[Corynebacterium genitalium ATCC 33030] Length = 127 Score = 134 bits (337), Expect = 3e-30 Identities = 68/134 (50%), Positives = 93/134 (69%), Gaps = 7/134 (5%) Query: 1 VPTGKVKWYDSDKGFGFLSQEEGEDVYVRSSALPAGVEGLKAGQRVEFGIASGRRGPQAX 60 +P GKVKW+D++KGFGF+S EDVYV + LP GVE L GQR+EF A+GRRGPQA Sbjct: 1 MPVGKVKWFDAEKGFGFVSNPGDEDVYVGKNVLPDGVEDLHPGQRIEFDFAAGRRGPQA- 59 Query: 61 XXXXXXXXXXXTRTRREAVEHKHSPDELHGMVEDMITLLESTVQPELRKGRYPDRKTARR 120 RR AV ++ P+EL M+ D++++LE+ VQP L GRYP+RK AR+ Sbjct: 60 -----LRVKLLDAPRRRAV-NRRKPEELASMLADVMSMLETQVQPALDAGRYPERKEARQ 113 Query: 121 VSEVVKAVARELDA 134 ++E+++AVA+ELDA Sbjct: 114 IAEILRAVAKELDA 127 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.314 0.132 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 874,159,458 Number of extensions: 29429457 Number of successful extensions: 59515 Number of sequences better than 10.0: 5618 Number of HSP's gapped: 56656 Number of HSP's successfully gapped: 5741 Length of query: 134 Length of database: 3,846,993,858 Length adjustment: 99 Effective length of query: 35 Effective length of database: 2,730,748,761 Effective search space: 95576206635 Effective search space used: 95576206635 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 75 (33.5 bits)