BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4857 (377 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HH06|B2HH06_MYCMM Tax_Id=216594 SubName: Full=Transcription... 686 0.0 tr|A0PLD2|A0PLD2_MYCUA Tax_Id=362242 SubName: Full=Transcription... 676 0.0 tr|A0QAV6|A0QAV6_MYCA1 Tax_Id=243243 SubName: Full=Dihydrouridin... 621 e-176 sp|O53835|DUS_MYCTU Tax_Id=1773 (dus)RecName: Full=Probable tRNA... 621 e-176 tr|C6DVC8|C6DVC8_MYCTK Tax_Id=478434 SubName: Full=Transcription... 621 e-176 tr|A5U0L2|A5U0L2_MYCTA Tax_Id=419947 SubName: Full=NifR3/SMM1 fa... 621 e-176 tr|A5WKJ2|A5WKJ2_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ... 621 e-176 tr|A2VGC3|A2VGC3_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 621 e-176 tr|Q7U170|Q7U170_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSC... 619 e-175 tr|C1ALF8|C1ALF8_MYCBT Tax_Id=561275 SubName: Full=Putative tran... 619 e-175 tr|A1KGV6|A1KGV6_MYCBP Tax_Id=410289 SubName: Full=Possible tran... 619 e-175 tr|Q743C8|Q743C8_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 617 e-175 tr|A4T7F4|A4T7F4_MYCGI Tax_Id=350054 SubName: Full=Putative TIM-... 604 e-171 tr|A1TFA7|A1TFA7_MYCVP Tax_Id=350058 SubName: Full=Putative TIM-... 604 e-171 tr|A0R4B5|A0R4B5_MYCS2 Tax_Id=246196 SubName: Full=tRNA-dihydrou... 595 e-168 tr|Q1B3B8|Q1B3B8_MYCSS Tax_Id=164756 SubName: Full=Dihydrouridin... 585 e-165 tr|A1ULT2|A1ULT2_MYCSK Tax_Id=189918 SubName: Full=Putative TIM-... 585 e-165 tr|A3Q683|A3Q683_MYCSJ Tax_Id=164757 SubName: Full=Putative TIM-... 582 e-164 tr|B1MI27|B1MI27_MYCA9 Tax_Id=561007 SubName: Full=Probable tRNA... 570 e-160 sp|Q50049|DUS_MYCLE Tax_Id=1769 (dus)RecName: Full=Probable tRNA... 563 e-158 tr|B8ZST6|B8ZST6_MYCLB Tax_Id=561304 SubName: Full=Transcription... 563 e-158 tr|Q0S733|Q0S733_RHOSR Tax_Id=101510 SubName: Full=Probable tRNA... 550 e-154 tr|C1ATD3|C1ATD3_RHOOB Tax_Id=632772 SubName: Full=Putative tRNA... 548 e-154 tr|C0ZP03|C0ZP03_RHOE4 Tax_Id=234621 SubName: Full=Putative tRNA... 544 e-153 tr|C3JEH0|C3JEH0_RHOER Tax_Id=596309 SubName: Full=Putative tRNA... 544 e-153 tr|D0L3U2|D0L3U2_GORB4 Tax_Id=526226 SubName: Full=TIM-barrel pr... 538 e-151 tr|A4KFD4|A4KFD4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ... 533 e-149 tr|C2AKX2|C2AKX2_TSUPA Tax_Id=521096 SubName: Full=Putative TIM-... 512 e-143 tr|Q4JXC2|Q4JXC2_CORJK Tax_Id=306537 SubName: Full=Putative unch... 503 e-140 tr|C8RS32|C8RS32_CORJE Tax_Id=525262 SubName: Full=tRNA-dihydrou... 497 e-139 tr|Q8NMK3|Q8NMK3_CORGL Tax_Id=1718 SubName: Full=Predicted TIM-b... 495 e-138 tr|C2CTC8|C2CTC8_CORST Tax_Id=525268 SubName: Full=Possible tRNA... 494 e-138 tr|C0E5G0|C0E5G0_9CORY Tax_Id=566549 SubName: Full=Putative unch... 492 e-137 tr|C5VFJ9|C5VFJ9_9CORY Tax_Id=553207 SubName: Full=Putative tRNA... 491 e-137 tr|Q8FMP2|Q8FMP2_COREF Tax_Id=152794 SubName: Full=Putative tran... 486 e-135 tr|C8NK90|C8NK90_COREF Tax_Id=196164 SubName: Full=tRNA-dihydrou... 486 e-135 tr|C0WH14|C0WH14_9CORY Tax_Id=525260 SubName: Full=Dihydrouridin... 482 e-134 tr|C3PIT8|C3PIT8_CORA7 Tax_Id=548476 SubName: Full=Putative unch... 481 e-134 tr|B1VII2|B1VII2_CORU7 Tax_Id=504474 SubName: Full=Putative unch... 481 e-134 tr|A4FQC1|A4FQC1_SACEN Tax_Id=405948 SubName: Full=Dihydrouridin... 480 e-133 tr|C2BMH5|C2BMH5_9CORY Tax_Id=525264 SubName: Full=Possible dihy... 480 e-133 tr|C6RCI7|C6RCI7_9CORY Tax_Id=553206 SubName: Full=Dihydrouridin... 479 e-133 tr|A4QGW8|A4QGW8_CORGB Tax_Id=340322 SubName: Full=Putative unch... 469 e-130 tr|C7MRB7|C7MRB7_SACVD Tax_Id=471857 SubName: Full=Putative TIM-... 468 e-130 tr|Q6NFI5|Q6NFI5_CORDI Tax_Id=1717 SubName: Full=Putative export... 467 e-130 tr|Q5Z290|Q5Z290_NOCFA Tax_Id=37329 SubName: Full=Putative dihyd... 458 e-127 tr|C4LH79|C4LH79_CORK4 Tax_Id=645127 SubName: Full=Putative unch... 451 e-125 tr|C8NYZ4|C8NYZ4_9CORY Tax_Id=585529 (dusB)SubName: Full=tRNA-di... 450 e-124 tr|C6WPQ6|C6WPQ6_ACTMD Tax_Id=446462 SubName: Full=TIM-barrel pr... 445 e-123 tr|C0XPC3|C0XPC3_9CORY Tax_Id=525263 SubName: Full=Possible dihy... 437 e-120 >tr|B2HH06|B2HH06_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulator;[Mycobacterium marinum] Length = 377 Score = 686 bits (1770), Expect = 0.0 Identities = 343/377 (90%), Positives = 344/377 (91%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 +RIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV Sbjct: 1 MRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA Sbjct: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 180 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH Sbjct: 241 GRPWLFAELSAAFTGNPGPTPPTLGEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD Sbjct: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 Query: 361 PDDCQVPDGADVMHSGG 377 PDDCQVPDGADVMHSGG Sbjct: 361 PDDCQVPDGADVMHSGG 377 >tr|A0PLD2|A0PLD2_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulator;[Mycobacterium ulcerans] Length = 377 Score = 676 bits (1744), Expect = 0.0 Identities = 337/377 (89%), Positives = 342/377 (90%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 +RIGPIELASPV LAPMAGVTNVAFRTLCRELE+AKVGTVSGLYVCEMVTARALVERHPV Sbjct: 1 MRIGPIELASPVALAPMAGVTNVAFRTLCRELEEAKVGTVSGLYVCEMVTARALVERHPV 60 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA Sbjct: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 180 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAM+AATGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMIAATGCDGVVIGRGCL 240 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EVTDIIRRHGELLAAHFGEDKG+RDIRKHVAWYLH Sbjct: 241 GRPWLFAELSAAFTGNPGPTPPTLGEVTDIIRRHGELLAAHFGEDKGVRDIRKHVAWYLH 300 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGSDLRRALALVKTLDELDSLLTRLDP VAFPEAANGPRGRQGSPSRVALPEGWLDD Sbjct: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPGVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC+VPDGADVMHSGG Sbjct: 361 PDDCRVPDGADVMHSGG 377 >tr|A0QAV6|A0QAV6_MYCA1 Tax_Id=243243 SubName: Full=Dihydrouridine synthase;[Mycobacterium avium] Length = 377 Score = 621 bits (1602), Expect = e-176 Identities = 306/377 (81%), Positives = 322/377 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 +RIGPIELASPVVLAPMAGVTNVAFRTLCRELE+ VGTVSGLYVCEMVTARALVERHP Sbjct: 1 MRIGPIELASPVVLAPMAGVTNVAFRTLCRELERELVGTVSGLYVCEMVTARALVERHPA 60 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTFAPDESPRSLQLYTVDP TTYAAA+MIA EGLADHIDMNFGCPVPKVTKRGGG+ Sbjct: 61 TMHMTTFAPDESPRSLQLYTVDPATTYAAAKMIANEGLADHIDMNFGCPVPKVTKRGGGS 120 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFGQIVAAAVR +GT+IPVTVKFRIGID+ HHTHLD Sbjct: 121 ALPYKRRLFGQIVAAAVRATQGTEIPVTVKFRIGIDEEHHTHLDAGRIAEAEGAAAVALH 180 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIALLKQ VRT+PVLGNGDIYDASDAL MMAATGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGTADWEQIALLKQQVRTIPVLGNGDIYDASDALTMMAATGCDGVVIGRGCL 240 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF +V DI+RRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 241 GRPWLFAELSAAFTGSPPPTPPTLGQVADIVRRHGRLLAAHFGEDKGMRDIRKHIAWYLH 300 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS+LRRALA+VKTLDELD LL RLD V FP+ A GPRGRQGSP+RV LPEGWLDD Sbjct: 301 GFPAGSELRRALAIVKTLDELDRLLDRLDGSVPFPDEATGPRGRQGSPARVVLPEGWLDD 360 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC VP GADVMHSGG Sbjct: 361 PDDCTVPAGADVMHSGG 377 >sp|O53835|DUS_MYCTU Tax_Id=1773 (dus)RecName: Full=Probable tRNA-dihydrouridine synthase; EC=1.-.-.-;[Mycobacterium tuberculosis] Length = 389 Score = 621 bits (1601), Expect = e-176 Identities = 308/377 (81%), Positives = 322/377 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGPIELASPVVLAPMAGVTNVAFR LCR+LEQ+KVGTVSGLYVCEMVTARAL+ERHPV Sbjct: 13 LRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPV 72 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF+ DESPRSLQLYTVDPDTTYAAARMIA EGLADHIDMNFGCPVPKVTKRGGGA Sbjct: 73 TMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGA 132 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVR EGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 133 ALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 192 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIA LKQHVRT+PVLGNGDIYDA DALAMM+ TGCDGVVIGRGCL Sbjct: 193 ARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCL 252 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV DIIRRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 253 GRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLH 312 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS LRRALA+VKT DELD LL RLD V FP++A G RGRQGSP+RVALP+GWL D Sbjct: 313 GFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTD 372 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC+VP+GAD M SGG Sbjct: 373 PDDCRVPEGADAMGSGG 389 >tr|C6DVC8|C6DVC8_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator;[Mycobacterium tuberculosis] Length = 389 Score = 621 bits (1601), Expect = e-176 Identities = 308/377 (81%), Positives = 322/377 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGPIELASPVVLAPMAGVTNVAFR LCR+LEQ+KVGTVSGLYVCEMVTARAL+ERHPV Sbjct: 13 LRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPV 72 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF+ DESPRSLQLYTVDPDTTYAAARMIA EGLADHIDMNFGCPVPKVTKRGGGA Sbjct: 73 TMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGA 132 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVR EGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 133 ALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 192 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIA LKQHVRT+PVLGNGDIYDA DALAMM+ TGCDGVVIGRGCL Sbjct: 193 ARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCL 252 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV DIIRRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 253 GRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLH 312 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS LRRALA+VKT DELD LL RLD V FP++A G RGRQGSP+RVALP+GWL D Sbjct: 313 GFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTD 372 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC+VP+GAD M SGG Sbjct: 373 PDDCRVPEGADAMGSGG 389 >tr|A5U0L2|A5U0L2_MYCTA Tax_Id=419947 SubName: Full=NifR3/SMM1 family protein;[Mycobacterium tuberculosis] Length = 389 Score = 621 bits (1601), Expect = e-176 Identities = 308/377 (81%), Positives = 322/377 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGPIELASPVVLAPMAGVTNVAFR LCR+LEQ+KVGTVSGLYVCEMVTARAL+ERHPV Sbjct: 13 LRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPV 72 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF+ DESPRSLQLYTVDPDTTYAAARMIA EGLADHIDMNFGCPVPKVTKRGGGA Sbjct: 73 TMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGA 132 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVR EGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 133 ALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 192 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIA LKQHVRT+PVLGNGDIYDA DALAMM+ TGCDGVVIGRGCL Sbjct: 193 ARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCL 252 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV DIIRRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 253 GRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLH 312 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS LRRALA+VKT DELD LL RLD V FP++A G RGRQGSP+RVALP+GWL D Sbjct: 313 GFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTD 372 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC+VP+GAD M SGG Sbjct: 373 PDDCRVPEGADAMGSGG 389 >tr|A5WKJ2|A5WKJ2_MYCTF Tax_Id=336982 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis] Length = 389 Score = 621 bits (1601), Expect = e-176 Identities = 308/377 (81%), Positives = 322/377 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGPIELASPVVLAPMAGVTNVAFR LCR+LEQ+KVGTVSGLYVCEMVTARAL+ERHPV Sbjct: 13 LRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPV 72 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF+ DESPRSLQLYTVDPDTTYAAARMIA EGLADHIDMNFGCPVPKVTKRGGGA Sbjct: 73 TMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGA 132 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVR EGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 133 ALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 192 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIA LKQHVRT+PVLGNGDIYDA DALAMM+ TGCDGVVIGRGCL Sbjct: 193 ARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCL 252 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV DIIRRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 253 GRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLH 312 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS LRRALA+VKT DELD LL RLD V FP++A G RGRQGSP+RVALP+GWL D Sbjct: 313 GFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTD 372 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC+VP+GAD M SGG Sbjct: 373 PDDCRVPEGADAMGSGG 389 >tr|A2VGC3|A2VGC3_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 389 Score = 621 bits (1601), Expect = e-176 Identities = 308/377 (81%), Positives = 322/377 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGPIELASPVVLAPMAGVTNVAFR LCR+LEQ+KVGTVSGLYVCEMVTARAL+ERHPV Sbjct: 13 LRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPV 72 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF+ DESPRSLQLYTVDPDTTYAAARMIA EGLADHIDMNFGCPVPKVTKRGGGA Sbjct: 73 TMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGA 132 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVR EGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 133 ALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 192 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIA LKQHVRT+PVLGNGDIYDA DALAMM+ TGCDGVVIGRGCL Sbjct: 193 ARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCL 252 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV DIIRRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 253 GRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLH 312 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS LRRALA+VKT DELD LL RLD V FP++A G RGRQGSP+RVALP+GWL D Sbjct: 313 GFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTD 372 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC+VP+GAD M SGG Sbjct: 373 PDDCRVPEGADAMGSGG 389 >tr|Q7U170|Q7U170_MYCBO Tax_Id=1765 SubName: Full=POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN;[Mycobacterium bovis] Length = 389 Score = 619 bits (1596), Expect = e-175 Identities = 308/377 (81%), Positives = 322/377 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGPIELASPVVLAPMAGVTNVAFR LCR+LEQ+KVGTVSGLYVCEMVTARAL+ERHPV Sbjct: 13 LRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPV 72 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF+ DESPRSLQLYTVDPDTTYAAARMIA EGLADHIDMNFGCPVPKVTKRG GA Sbjct: 73 TMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGCGA 132 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVR EGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 133 ALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 192 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIA LKQHVRT+PVLGNGDIYDA DALAMM+ TGCDGVVIGRGCL Sbjct: 193 ARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCL 252 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV DIIRRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 253 GRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLH 312 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS LRRALA+VKTLDELD LL RLD V FP++A G RGRQGSP+RVALP+GWL D Sbjct: 313 GFPAGSALRRALAMVKTLDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTD 372 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC+VP+GAD M SGG Sbjct: 373 PDDCRVPEGADAMGSGG 389 >tr|C1ALF8|C1ALF8_MYCBT Tax_Id=561275 SubName: Full=Putative transcriptional regulatory protein;[Mycobacterium bovis] Length = 389 Score = 619 bits (1596), Expect = e-175 Identities = 308/377 (81%), Positives = 322/377 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGPIELASPVVLAPMAGVTNVAFR LCR+LEQ+KVGTVSGLYVCEMVTARAL+ERHPV Sbjct: 13 LRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPV 72 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF+ DESPRSLQLYTVDPDTTYAAARMIA EGLADHIDMNFGCPVPKVTKRG GA Sbjct: 73 TMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGCGA 132 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVR EGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 133 ALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 192 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIA LKQHVRT+PVLGNGDIYDA DALAMM+ TGCDGVVIGRGCL Sbjct: 193 ARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCL 252 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV DIIRRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 253 GRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLH 312 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS LRRALA+VKTLDELD LL RLD V FP++A G RGRQGSP+RVALP+GWL D Sbjct: 313 GFPAGSALRRALAMVKTLDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTD 372 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC+VP+GAD M SGG Sbjct: 373 PDDCRVPEGADAMGSGG 389 >tr|A1KGV6|A1KGV6_MYCBP Tax_Id=410289 SubName: Full=Possible transcriptional regulatory protein;[Mycobacterium bovis] Length = 389 Score = 619 bits (1596), Expect = e-175 Identities = 308/377 (81%), Positives = 322/377 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGPIELASPVVLAPMAGVTNVAFR LCR+LEQ+KVGTVSGLYVCEMVTARAL+ERHPV Sbjct: 13 LRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPV 72 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF+ DESPRSLQLYTVDPDTTYAAARMIA EGLADHIDMNFGCPVPKVTKRG GA Sbjct: 73 TMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGCGA 132 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVR EGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 133 ALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 192 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIA LKQHVRT+PVLGNGDIYDA DALAMM+ TGCDGVVIGRGCL Sbjct: 193 ARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCL 252 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV DIIRRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 253 GRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLH 312 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS LRRALA+VKTLDELD LL RLD V FP++A G RGRQGSP+RVALP+GWL D Sbjct: 313 GFPAGSALRRALAMVKTLDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTD 372 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC+VP+GAD M SGG Sbjct: 373 PDDCRVPEGADAMGSGG 389 >tr|Q743C8|Q743C8_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 377 Score = 617 bits (1590), Expect = e-175 Identities = 304/377 (80%), Positives = 321/377 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 +RIGPIELASPVVLAPMAGVTNVAFRTLCRELE+ VGTVSGLYV EMVTARALVERHP Sbjct: 1 MRIGPIELASPVVLAPMAGVTNVAFRTLCRELERELVGTVSGLYVYEMVTARALVERHPA 60 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHM TFAPDESPRSLQLYTVDP TTYAAA+MIA+EGLADHIDMNFGCPVPKVTKRGGG+ Sbjct: 61 TMHMITFAPDESPRSLQLYTVDPATTYAAAKMIADEGLADHIDMNFGCPVPKVTKRGGGS 120 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFGQIVAAAVR +GT+IPVTVKFRIGIDD HHTHLD Sbjct: 121 ALPYKRRLFGQIVAAAVRATQGTEIPVTVKFRIGIDDEHHTHLDAGRIAEAEGAAAVALH 180 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIALLKQ VRT+PVLGNGDIYDASDAL MMAATGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGTADWEQIALLKQQVRTIPVLGNGDIYDASDALTMMAATGCDGVVIGRGCL 240 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF +V DI+RRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 241 GRPWLFAELSAAFTGSPPPTPPTLGQVADIVRRHGRLLAAHFGEDKGMRDIRKHIAWYLH 300 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS+LRRALA+VKTLDELD LL RLD V FP+ A GPRGRQGSP+RV LPEGWLDD Sbjct: 301 GFPAGSELRRALAMVKTLDELDRLLDRLDGSVPFPDEATGPRGRQGSPARVVLPEGWLDD 360 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC VP GAD+MHSGG Sbjct: 361 PDDCTVPAGADIMHSGG 377 >tr|A4T7F4|A4T7F4_MYCGI Tax_Id=350054 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium gilvum] Length = 455 Score = 604 bits (1558), Expect = e-171 Identities = 297/377 (78%), Positives = 316/377 (83%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGP +L SPVVLAPMAGVTNVAFRTLCRELE ++ GTVSGLYVCEMVTARALVERHPV Sbjct: 79 LRIGPFDLRSPVVLAPMAGVTNVAFRTLCRELELSRAGTVSGLYVCEMVTARALVERHPV 138 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTFAP+ESPRSLQLYTVDP TYAAA+MI +E LADHIDMNFGCPVPKVT+RGGGA Sbjct: 139 TMHMTTFAPEESPRSLQLYTVDPVNTYAAAKMIVDENLADHIDMNFGCPVPKVTRRGGGA 198 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFGQIV+AAVR EGTDIPVTVKFRIGIDD HHTHLD Sbjct: 199 ALPYKRRLFGQIVSAAVRATEGTDIPVTVKFRIGIDDEHHTHLDAGRIAAEEGAAAVALH 258 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSG+ADW+QIA LK HV VPVLGNGDI+DA DALAMMAATGCDGVVIGRGCL Sbjct: 259 ARTAAQRYSGSADWDQIAALKAHVTNVPVLGNGDIFDARDALAMMAATGCDGVVIGRGCL 318 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV IIRRHGELLAAHFGEDKGMRDIRKHVAWY+H Sbjct: 319 GRPWLFAELSAAFTGATPATPPTLGEVAQIIRRHGELLAAHFGEDKGMRDIRKHVAWYMH 378 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAG+DLRR++ALVKT+ ELD LL +LDPDV FP AANGPRGRQGS + V LPEGWLDD Sbjct: 379 GFPAGADLRRSMALVKTISELDDLLEQLDPDVPFPAAANGPRGRQGSAASVTLPEGWLDD 438 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC VP GADVMHSGG Sbjct: 439 PDDCTVPAGADVMHSGG 455 >tr|A1TFA7|A1TFA7_MYCVP Tax_Id=350058 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium vanbaalenii] Length = 377 Score = 604 bits (1557), Expect = e-171 Identities = 297/377 (78%), Positives = 315/377 (83%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 +RIGPI L SPVVLAPMAGVTNVAFRTLCRELE ++ GTVSGLYVCEMVTARALVERHPV Sbjct: 1 MRIGPIALHSPVVLAPMAGVTNVAFRTLCRELELSRAGTVSGLYVCEMVTARALVERHPV 60 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTFAP+ESPRSLQLYTVDP TYAAA+MI +E LADHIDMNFGCPVPKVT+RGGGA Sbjct: 61 TMHMTTFAPEESPRSLQLYTVDPANTYAAAKMIVDENLADHIDMNFGCPVPKVTRRGGGA 120 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFGQI+ AAV EGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 121 ALPYKRRLFGQIIRAAVAATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAADEGAAAVALH 180 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSG+ADWEQIA LK HV +PVLGNGDI+DA DALAMMAATGCDGVVIGRGCL Sbjct: 181 ARTAAQRYSGSADWEQIAALKAHVTNIPVLGNGDIFDARDALAMMAATGCDGVVIGRGCL 240 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV IIRRHGELLAAHFGEDKGMRDIRKHVAWY+H Sbjct: 241 GRPWLFAELSAAFNGTAPATPPTLGEVAQIIRRHGELLAAHFGEDKGMRDIRKHVAWYMH 300 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAG+DLRR+LALVKT+ ELD LL +LDPDV FP AANGPRGRQGS + V LPEGWLDD Sbjct: 301 GFPAGADLRRSLALVKTISELDDLLDQLDPDVPFPAAANGPRGRQGSAASVTLPEGWLDD 360 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC VP GADVMHSGG Sbjct: 361 PDDCTVPAGADVMHSGG 377 >tr|A0R4B5|A0R4B5_MYCS2 Tax_Id=246196 SubName: Full=tRNA-dihydrouridine synthase, putative; EC=1.-.-.-;[Mycobacterium smegmatis] Length = 389 Score = 595 bits (1533), Expect = e-168 Identities = 297/377 (78%), Positives = 311/377 (82%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L+IG I L SPVVLAPMAGVTNVAFRTLCRELE A+ GTVSGLYVCEMVTARALVERHPV Sbjct: 13 LQIGSIALHSPVVLAPMAGVTNVAFRTLCRELEIARAGTVSGLYVCEMVTARALVERHPV 72 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTFAP+ESPRSLQLYTVDP+ TY AA+MI +E LADHIDMNFGCPVPKVTKRGGGA Sbjct: 73 TMHMTTFAPEESPRSLQLYTVDPENTYKAAKMIVDEDLADHIDMNFGCPVPKVTKRGGGA 132 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFGQIVAAAVR EGTDIPVTVKFRIGIDD HHTHLD Sbjct: 133 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDEHHTHLDAGRIAAEEGAAAVALH 192 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIA LK HV +PVLGNGDI++A DALAMMAATGCDGVVIGRGCL Sbjct: 193 ARTAAQRYSGTADWEQIAALKAHVTGIPVLGNGDIFEADDALAMMAATGCDGVVIGRGCL 252 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV DI+RRHGELL+ HFGEDKGMRDIRKHVAWYLH Sbjct: 253 GRPWLFAELSAAFNNRPIPTPPTLGEVADIVRRHGELLSRHFGEDKGMRDIRKHVAWYLH 312 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAG+DLRRALALVKT ELD LL +LD D FP AA GPRGRQGS S V LPEGWLDD Sbjct: 313 GFPAGADLRRALALVKTRRELDELLDQLDRDAPFPPAATGPRGRQGSASSVHLPEGWLDD 372 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC VP GADVMHSGG Sbjct: 373 PDDCAVPVGADVMHSGG 389 >tr|Q1B3B8|Q1B3B8_MYCSS Tax_Id=164756 SubName: Full=Dihydrouridine synthase TIM-barrel protein nifR3;[Mycobacterium sp.] Length = 370 Score = 585 bits (1507), Expect = e-165 Identities = 291/370 (78%), Positives = 303/370 (81%) Query: 8 LASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPVTMHMTTF 67 + SPVVLAPMAGVTNVAFRTLCRELE A+ GTVSGLYVCEMVTARALVERHPVTMHMT F Sbjct: 1 MPSPVVLAPMAGVTNVAFRTLCRELEVARAGTVSGLYVCEMVTARALVERHPVTMHMTAF 60 Query: 68 APDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGAALPFKRR 127 A DESPRSLQLYTVDP TTYAAA+MIA+E +ADHIDMNFGCPVPKVTKRGGGAALP+KR+ Sbjct: 61 ASDESPRSLQLYTVDPATTYAAAKMIADENMADHIDMNFGCPVPKVTKRGGGAALPYKRK 120 Query: 128 LFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXXXXXXXQR 187 LFGQIV AAV EGTDIPVTVKFRIGIDDAHHTHLD QR Sbjct: 121 LFGQIVRAAVTATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAAEEGAAAVALHARTAAQR 180 Query: 188 YSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCLGRPWLFA 247 YSGTADW+QIA LK HV VPVLGNGDI+DA DALAMMAATGCDGVVIGRGCLGRPWLFA Sbjct: 181 YSGTADWDQIAALKAHVTAVPVLGNGDIFDADDALAMMAATGCDGVVIGRGCLGRPWLFA 240 Query: 248 ELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLHGFPAGSD 307 ELSA F EV DIIRRHGELL HFGEDK MRDIRKH+AWYLHGFPAGSD Sbjct: 241 ELSAKFTGRPLPVPPTLGEVADIIRRHGELLTDHFGEDKAMRDIRKHIAWYLHGFPAGSD 300 Query: 308 LRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDDPDDCQVP 367 LRRALALVKT EL LL RLDPDV FP AA GPRGRQGS + V+LPEGWL DPDDC VP Sbjct: 301 LRRALALVKTRAELSELLARLDPDVPFPPAATGPRGRQGSAASVSLPEGWLTDPDDCTVP 360 Query: 368 DGADVMHSGG 377 GADVMHSGG Sbjct: 361 AGADVMHSGG 370 >tr|A1ULT2|A1ULT2_MYCSK Tax_Id=189918 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium sp.] Length = 370 Score = 585 bits (1507), Expect = e-165 Identities = 291/370 (78%), Positives = 303/370 (81%) Query: 8 LASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPVTMHMTTF 67 + SPVVLAPMAGVTNVAFRTLCRELE A+ GTVSGLYVCEMVTARALVERHPVTMHMT F Sbjct: 1 MPSPVVLAPMAGVTNVAFRTLCRELEVARAGTVSGLYVCEMVTARALVERHPVTMHMTAF 60 Query: 68 APDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGAALPFKRR 127 A DESPRSLQLYTVDP TTYAAA+MIA+E +ADHIDMNFGCPVPKVTKRGGGAALP+KR+ Sbjct: 61 ASDESPRSLQLYTVDPATTYAAAKMIADENMADHIDMNFGCPVPKVTKRGGGAALPYKRK 120 Query: 128 LFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXXXXXXXQR 187 LFGQIV AAV EGTDIPVTVKFRIGIDDAHHTHLD QR Sbjct: 121 LFGQIVRAAVTATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAAEEGAAAVALHARTAAQR 180 Query: 188 YSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCLGRPWLFA 247 YSGTADW+QIA LK HV VPVLGNGDI+DA DALAMMAATGCDGVVIGRGCLGRPWLFA Sbjct: 181 YSGTADWDQIAALKAHVTAVPVLGNGDIFDADDALAMMAATGCDGVVIGRGCLGRPWLFA 240 Query: 248 ELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLHGFPAGSD 307 ELSA F EV DIIRRHGELL HFGEDK MRDIRKH+AWYLHGFPAGSD Sbjct: 241 ELSAKFTGRPLPVPPTLGEVADIIRRHGELLTDHFGEDKAMRDIRKHIAWYLHGFPAGSD 300 Query: 308 LRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDDPDDCQVP 367 LRRALALVKT EL LL RLDPDV FP AA GPRGRQGS + V+LPEGWL DPDDC VP Sbjct: 301 LRRALALVKTRAELSELLARLDPDVPFPPAATGPRGRQGSAASVSLPEGWLTDPDDCTVP 360 Query: 368 DGADVMHSGG 377 GADVMHSGG Sbjct: 361 AGADVMHSGG 370 >tr|A3Q683|A3Q683_MYCSJ Tax_Id=164757 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Mycobacterium sp.] Length = 370 Score = 582 bits (1500), Expect = e-164 Identities = 290/370 (78%), Positives = 302/370 (81%) Query: 8 LASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPVTMHMTTF 67 + SPVVLAPMAGVTNVAFRTLCRELE A+ GTVSGLYVCEMVTARALVERHPVTMHMT F Sbjct: 1 MPSPVVLAPMAGVTNVAFRTLCRELEVARAGTVSGLYVCEMVTARALVERHPVTMHMTAF 60 Query: 68 APDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGAALPFKRR 127 A DESPRSLQLYTVDP TTYAAA+MIA+E +ADHIDMNFGCPVPKVTKRGGGAALP+KR+ Sbjct: 61 ASDESPRSLQLYTVDPATTYAAAKMIADENMADHIDMNFGCPVPKVTKRGGGAALPYKRK 120 Query: 128 LFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXXXXXXXQR 187 LFGQIV AAV EGTDIPVTVKFRIGIDDAHHTHLD QR Sbjct: 121 LFGQIVRAAVTATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAAEEGAAAVALHARTAAQR 180 Query: 188 YSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCLGRPWLFA 247 YSGTADW+QIA LK HV VPVLGNGDI+DA DALAMMAATGCDGVVIGRGCLGRPWLFA Sbjct: 181 YSGTADWDQIAALKAHVTAVPVLGNGDIFDADDALAMMAATGCDGVVIGRGCLGRPWLFA 240 Query: 248 ELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLHGFPAGSD 307 ELSA F EV DIIRRHGELL HFGEDK MRDIRKH+AWYLHGFPAGSD Sbjct: 241 ELSAKFTGRPLPVPPTLGEVADIIRRHGELLTDHFGEDKAMRDIRKHIAWYLHGFPAGSD 300 Query: 308 LRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDDPDDCQVP 367 LRRALALVKT EL LL RLDPDV FP AA GPRGRQGS + V+LPEGWL DPDDC VP Sbjct: 301 LRRALALVKTRAELSELLARLDPDVPFPPAATGPRGRQGSAASVSLPEGWLTDPDDCTVP 360 Query: 368 DGADVMHSGG 377 GA VMHSGG Sbjct: 361 AGAHVMHSGG 370 >tr|B1MI27|B1MI27_MYCA9 Tax_Id=561007 SubName: Full=Probable tRNA-dihydrouridine synthase;[Mycobacterium abscessus] Length = 391 Score = 570 bits (1468), Expect = e-160 Identities = 275/377 (72%), Positives = 304/377 (80%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIG + L SPVVLAPMAGVTNVAFRTLCRELE A GTVSGLYVCEMVTARAL ERHPV Sbjct: 15 LRIGSLALPSPVVLAPMAGVTNVAFRTLCRELELATTGTVSGLYVCEMVTARALAERHPV 74 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTF+P+ESPRSLQLY+VDP+TTY AA+M+ +EGLADHIDMNFGCPVPKVT+ GGGA Sbjct: 75 TLHMTTFSPEESPRSLQLYSVDPETTYRAAKMVVDEGLADHIDMNFGCPVPKVTRNGGGA 134 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFGQIVAAAVR GTDIPVTVKFR+GIDD HHTHLD Sbjct: 135 ALPYKRRLFGQIVAAAVRATAGTDIPVTVKFRVGIDDDHHTHLDAGAIAESEGAAAVALH 194 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADW QIA LK HV T+PVLGNGDI+DA+DA+AMM TGCDGVVIGRGCL Sbjct: 195 ARTASQRYSGTADWSQIAALKNHVTTIPVLGNGDIFDAADAVAMMEQTGCDGVVIGRGCL 254 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSA F +VT I+RRH ELL HFGEDK +RD+RKH+AWYLH Sbjct: 255 GRPWLFAELSAVFNGQTIPAPPNLGQVTVIMRRHAELLVDHFGEDKALRDMRKHIAWYLH 314 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAG D+RRALALV T ELD+LL +LD FPE NGPRGRQGSP++V+LP+GWL+D Sbjct: 315 GFPAGGDIRRALALVSTRAELDTLLEQLDQSAPFPEGGNGPRGRQGSPAKVSLPDGWLND 374 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC VP ADVMHSGG Sbjct: 375 PDDCTVPSAADVMHSGG 391 >sp|Q50049|DUS_MYCLE Tax_Id=1769 (dus)RecName: Full=Probable tRNA-dihydrouridine synthase; EC=1.-.-.-;[Mycobacterium leprae] Length = 384 Score = 563 bits (1452), Expect = e-158 Identities = 283/384 (73%), Positives = 305/384 (79%), Gaps = 19/384 (4%) Query: 13 VLAPMAGVTNVAFRTLCRE-------------------LEQAKVGTVSGLYVCEMVTARA 53 +LAPMAGVTNV FRTLCRE LEQ++VGT+SGLYVCEMVTARA Sbjct: 1 MLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 Query: 54 LVERHPVTMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKV 113 LVER+ VT+HMTTFAPDESPRSLQLYTVDP TTY AA+M+A+EGLADHIDMNFGCP+PKV Sbjct: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 Query: 114 TKRGGGAALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXX 173 T+RGGGAALP+KRRLFGQIVAAAVR EGT IPVTVKFRIGIDD HHTHLD Sbjct: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDAGRIAEAEG 180 Query: 174 XXXXXXXXXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGV 233 QRYSGTADW QIA LKQ VRT+PVLGNGDIYDASDALAMMA TGCDGV Sbjct: 181 AAAVALHARTAAQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 Query: 234 VIGRGCLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRK 293 VIGRGCLGRPWLFAELSAAF EV +I+RRHG+LL AHFGEDKGMRDIRK Sbjct: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 Query: 294 HVAWYLHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVAL 353 H+AWYLHGFPAGS+LR ALALVKTLDELD LL RLD V FP+AA GPRGRQGSP+ VAL Sbjct: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 Query: 354 PEGWLDDPDDCQVPDGADVMHSGG 377 P+ WL DPDDC VP GAD+M SGG Sbjct: 361 PDSWLTDPDDCTVPIGADIMESGG 384 >tr|B8ZST6|B8ZST6_MYCLB Tax_Id=561304 SubName: Full=Transcriptional regulator (NifR3/Smm1 family);[Mycobacterium leprae] Length = 384 Score = 563 bits (1452), Expect = e-158 Identities = 283/384 (73%), Positives = 305/384 (79%), Gaps = 19/384 (4%) Query: 13 VLAPMAGVTNVAFRTLCRE-------------------LEQAKVGTVSGLYVCEMVTARA 53 +LAPMAGVTNV FRTLCRE LEQ++VGT+SGLYVCEMVTARA Sbjct: 1 MLAPMAGVTNVTFRTLCREFGSTRGNLLRPAPPHLRSPLEQSQVGTISGLYVCEMVTARA 60 Query: 54 LVERHPVTMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKV 113 LVER+ VT+HMTTFAPDESPRSLQLYTVDP TTY AA+M+A+EGLADHIDMNFGCP+PKV Sbjct: 61 LVERNAVTIHMTTFAPDESPRSLQLYTVDPATTYTAAKMVADEGLADHIDMNFGCPMPKV 120 Query: 114 TKRGGGAALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXX 173 T+RGGGAALP+KRRLFGQIVAAAVR EGT IPVTVKFRIGIDD HHTHLD Sbjct: 121 TRRGGGAALPYKRRLFGQIVAAAVRATEGTKIPVTVKFRIGIDDEHHTHLDAGRIAEAEG 180 Query: 174 XXXXXXXXXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGV 233 QRYSGTADW QIA LKQ VRT+PVLGNGDIYDASDALAMMA TGCDGV Sbjct: 181 AAAVALHARTAAQRYSGTADWAQIAQLKQQVRTIPVLGNGDIYDASDALAMMAVTGCDGV 240 Query: 234 VIGRGCLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRK 293 VIGRGCLGRPWLFAELSAAF EV +I+RRHG+LL AHFGEDKGMRDIRK Sbjct: 241 VIGRGCLGRPWLFAELSAAFTGRPAPAPPTLGEVAEIVRRHGKLLVAHFGEDKGMRDIRK 300 Query: 294 HVAWYLHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVAL 353 H+AWYLHGFPAGS+LR ALALVKTLDELD LL RLD V FP+AA GPRGRQGSP+ VAL Sbjct: 301 HIAWYLHGFPAGSELRNALALVKTLDELDCLLNRLDGAVPFPDAAIGPRGRQGSPAWVAL 360 Query: 354 PEGWLDDPDDCQVPDGADVMHSGG 377 P+ WL DPDDC VP GAD+M SGG Sbjct: 361 PDSWLTDPDDCTVPIGADIMESGG 384 >tr|Q0S733|Q0S733_RHOSR Tax_Id=101510 SubName: Full=Probable tRNA-dihydrouridine synthase;[Rhodococcus sp.] Length = 380 Score = 550 bits (1417), Expect = e-154 Identities = 267/377 (70%), Positives = 297/377 (78%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIG +EL SPVVLAPMAG+TNVAFRTLCRELE + G+ SGLYVCEMVTARALVER P Sbjct: 4 LRIGSLELRSPVVLAPMAGITNVAFRTLCRELETERAGSTSGLYVCEMVTARALVERQPA 63 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTF P E+PRSLQLYTVDPDTTYAAA+MI +E +ADHIDMNFGCPVPKVT++GGGA Sbjct: 64 TLHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKVTRKGGGA 123 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KR LFG+IVAAAV+ EGTD+PVTVKFR+GID HHTHLD Sbjct: 124 ALPYKRTLFGRIVAAAVKATEGTDVPVTVKFRVGIDAEHHTHLDAGRIAAGEGAAAVALH 183 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADW +IA LK+HV VPVLGNGDI+ A DA MM TGCDGVV+GRGCL Sbjct: 184 ARTASQRYSGTADWNEIARLKEHVTDVPVLGNGDIFAAEDAARMMEQTGCDGVVVGRGCL 243 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAA EV IIRRH ELLA H GEDKG+R++RKHV+WYL Sbjct: 244 GRPWLFAELSAALNGKPQPTPPNLGEVATIIRRHAELLADHHGEDKGLRELRKHVSWYLR 303 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS+LR A+ALV TL ELD LL +LDP + FP+ A GPRGRQGSP VALPEGWLDD Sbjct: 304 GFPAGSELRVAMALVSTLTELDDLLVQLDPTIPFPKDAEGPRGRQGSPGTVALPEGWLDD 363 Query: 361 PDDCQVPDGADVMHSGG 377 PDDC VP GAD+MHSGG Sbjct: 364 PDDCLVPAGADLMHSGG 380 >tr|C1ATD3|C1ATD3_RHOOB Tax_Id=632772 SubName: Full=Putative tRNA-dihydrouridine synthase;[Rhodococcus opacus] Length = 380 Score = 548 bits (1412), Expect = e-154 Identities = 266/377 (70%), Positives = 297/377 (78%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIG +EL SPVVLAPMAG+TNVAFRTLCRELE + G+ SGLYVCEMVTARALVER P Sbjct: 4 LRIGSLELRSPVVLAPMAGITNVAFRTLCRELETERAGSTSGLYVCEMVTARALVERQPA 63 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTF P E+PRSLQLYTVDPDTTYAAA+MI +E +ADHIDMNFGCPVPKVT++GGGA Sbjct: 64 TLHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKVTRKGGGA 123 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KR LFG+IVAAAV+ EGTD+PVTVKFR+GID HHTHLD Sbjct: 124 ALPYKRTLFGRIVAAAVKATEGTDVPVTVKFRVGIDADHHTHLDAGRIAAGEGAAAVALH 183 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADW +IA LK+HV VPVLGNGDI+ A DA MM TGCDGVV+GRGCL Sbjct: 184 ARTASQRYSGTADWNEIARLKEHVTDVPVLGNGDIFAAEDAARMMEQTGCDGVVVGRGCL 243 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAA EV IIRRH ELLA H GEDKG+R++RKHV+WYL Sbjct: 244 GRPWLFAELSAALNGKPQPTPPNLGEVATIIRRHAELLADHHGEDKGLRELRKHVSWYLR 303 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS+LR A+ALV TL ELD LL +LDP + FP+ A GPRGRQGSP VALPEGWLDD Sbjct: 304 GFPAGSELRVAMALVSTLTELDDLLVQLDPTIPFPKDAEGPRGRQGSPGTVALPEGWLDD 363 Query: 361 PDDCQVPDGADVMHSGG 377 P+DC VP GAD+MHSGG Sbjct: 364 PEDCLVPAGADLMHSGG 380 >tr|C0ZP03|C0ZP03_RHOE4 Tax_Id=234621 SubName: Full=Putative tRNA-dihydrouridine synthase;[Rhodococcus erythropolis] Length = 380 Score = 544 bits (1402), Expect = e-153 Identities = 267/377 (70%), Positives = 297/377 (78%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIG +EL SPVVLAPMAGVTNVAFRTLCRELE + G+ SGLYVCEMVTARALVER P Sbjct: 4 LRIGSLELHSPVVLAPMAGVTNVAFRTLCRELELERAGSTSGLYVCEMVTARALVERQPA 63 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF P E+PRSLQLYTVDPDTTYAAA+MI +E +ADHIDMNFGCPVPKVT++GGG+ Sbjct: 64 TMHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKVTRKGGGS 123 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFGQIVAAAVR EGTDIPVTVK R+GID HHTHLD Sbjct: 124 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKMRVGIDPEHHTHLDAGRIAAAEGAAAVALH 183 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADW +I LK+HV VP+LGNGDI+DASDA MM TGCDGVV+GRGCL Sbjct: 184 ARTASQRYSGTADWNEITRLKEHVTDVPILGNGDIFDASDAARMMNETGCDGVVVGRGCL 243 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAA EVT II RH +LLAAH GE KG+R++RKHV+WY+ Sbjct: 244 GRPWLFAELSAALNGQQIATPPTLGEVTKIIARHAQLLAAHHGEMKGLRELRKHVSWYMR 303 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFP GSDLR ++ALV TL ELD LL +LD DV FP+ A GPRGRQGSP +VALPEGWLDD Sbjct: 304 GFPVGSDLRVSMALVSTLSELDDLLGQLDHDVPFPKDAEGPRGRQGSPGQVALPEGWLDD 363 Query: 361 PDDCQVPDGADVMHSGG 377 P+D VP GAD+MHSGG Sbjct: 364 PEDDLVPVGADMMHSGG 380 >tr|C3JEH0|C3JEH0_RHOER Tax_Id=596309 SubName: Full=Putative tRNA-dihydrouridine synthase;[Rhodococcus erythropolis SK121] Length = 380 Score = 544 bits (1402), Expect = e-153 Identities = 267/377 (70%), Positives = 297/377 (78%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIG +EL SPVVLAPMAGVTNVAFRTLCRELE + G+ SGLYVCEMVTARALVER P Sbjct: 4 LRIGSLELHSPVVLAPMAGVTNVAFRTLCRELELERAGSTSGLYVCEMVTARALVERQPA 63 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF P E+PRSLQLYTVDPDTTYAAA+MI +E +ADHIDMNFGCPVPKVT++GGG+ Sbjct: 64 TMHMTTFGPTETPRSLQLYTVDPDTTYAAAKMIVDENMADHIDMNFGCPVPKVTRKGGGS 123 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFGQIVAAAVR EGTDIPVTVK R+GID HHTHLD Sbjct: 124 ALPYKRRLFGQIVAAAVRATEGTDIPVTVKMRVGIDPEHHTHLDAGRIAAAEGAAAVALH 183 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADW +I LK+HV VP+LGNGDI+DASDA MM TGCDGVV+GRGCL Sbjct: 184 ARTASQRYSGTADWNEITRLKEHVTDVPILGNGDIFDASDAARMMNETGCDGVVVGRGCL 243 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAA EVT II RH +LLAAH GE KG+R++RKHV+WY+ Sbjct: 244 GRPWLFAELSAALNGQQIATPPTLGEVTKIIARHAQLLAAHHGEMKGLRELRKHVSWYMR 303 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFP GSDLR ++ALV TL ELD LL +LD DV FP+ A GPRGRQGSP +VALPEGWLDD Sbjct: 304 GFPVGSDLRVSMALVSTLSELDDLLGQLDHDVPFPKDAEGPRGRQGSPGQVALPEGWLDD 363 Query: 361 PDDCQVPDGADVMHSGG 377 P+D VP GAD+MHSGG Sbjct: 364 PEDDLVPVGADMMHSGG 380 >tr|D0L3U2|D0L3U2_GORB4 Tax_Id=526226 SubName: Full=TIM-barrel protein, nifR3 family;[Gordonia bronchialis] Length = 394 Score = 538 bits (1385), Expect = e-151 Identities = 266/377 (70%), Positives = 299/377 (79%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIG IELASPVVLAPMAGVTNVAFRTLCRELE A+ GTVSGLYVCEMVTARALVERHPV Sbjct: 18 LRIGSIELASPVVLAPMAGVTNVAFRTLCRELEIARTGTVSGLYVCEMVTARALVERHPV 77 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTFAP+ESPRS+QLYTVDP+ TYAAA+MI +E LADHIDMNFGCPVPKVT++GGG+ Sbjct: 78 TMHMTTFAPEESPRSMQLYTVDPEYTYAAAKMIVDEDLADHIDMNFGCPVPKVTRKGGGS 137 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 A+P+KR LF +IVAAAVR EGTDIPVTVKFRIGIDD H THLD Sbjct: 138 AIPYKRTLFRKIVAAAVRATEGTDIPVTVKFRIGIDDEHRTHLDAGRIAAEEGAKAVALH 197 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSG ADW++IA LK HV VPVLGNGDI++ DA+ MM TGCDGVVIGRGCL Sbjct: 198 ARTASQRYSGQADWDEIARLKDHVTDVPVLGNGDIFEPVDAVEMMRRTGCDGVVIGRGCL 257 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAEL+A EV DII RH ELL AH GE KG R+IRKHVAWYL Sbjct: 258 GRPWLFAELAAEMNGVEAPTPPTLGEVADIIVRHCELLVAHHGEMKGCREIRKHVAWYLR 317 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFPAGS+LRR +ALV+T+D+L L+ L DV FP +GPRGRQGSP++VALP+GWLDD Sbjct: 318 GFPAGSELRRQMALVETVDQLRELVATLPADVPFPTDGHGPRGRQGSPAKVALPDGWLDD 377 Query: 361 PDDCQVPDGADVMHSGG 377 PD+ VP+GA++MHSGG Sbjct: 378 PDEDVVPEGAEIMHSGG 394 >tr|A4KFD4|A4KFD4_MYCTU Tax_Id=395095 SubName: Full=Hypothetical transcriptional regulatory protein;[Mycobacterium tuberculosis str. Haarlem] Length = 339 Score = 533 bits (1372), Expect = e-149 Identities = 266/319 (83%), Positives = 274/319 (85%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGPIELASPVVLAPMAGVTNVAFR LCR+LEQ+KVGTVSGLYVCEMVTARAL+ERHPV Sbjct: 13 LRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPV 72 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF+ DESPRSLQLYTVDPDTTYAAARMIA EGLADHIDMNFGCPVPKVTKRGGGA Sbjct: 73 TMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGA 132 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKRRLFGQIVAAAVR EGTDIPVTVKFRIGIDDAHHTHLD Sbjct: 133 ALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALH 192 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADWEQIA LKQHVRT+PVLGNGDIYDA DALAMM+ TGCDGVVIGRGCL Sbjct: 193 ARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCL 252 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAELSAAF EV DIIRRHG LLAAHFGEDKGMRDIRKH+AWYLH Sbjct: 253 GRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLH 312 Query: 301 GFPAGSDLRRALALVKTLD 319 GFPAGS LRRALA+VKT D Sbjct: 313 GFPAGSALRRALAMVKTFD 331 >tr|C2AKX2|C2AKX2_TSUPA Tax_Id=521096 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Tsukamurella paurometabola DSM 20162] Length = 396 Score = 512 bits (1318), Expect = e-143 Identities = 263/388 (67%), Positives = 291/388 (75%), Gaps = 11/388 (2%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIG EL SPVVLAPMAGVTNVAFR+LCRELE+A+ GTV+GLYVCEMVTARALVERHPV Sbjct: 9 LRIGRFELDSPVVLAPMAGVTNVAFRSLCRELERARTGTVAGLYVCEMVTARALVERHPV 68 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTFAPDE PRSLQLYTVD TY AARMIAEEGLADH+DMNFGCPVPK+T+RGGG+ Sbjct: 69 TMHMTTFAPDEDPRSLQLYTVDAHYTYEAARMIAEEGLADHLDMNFGCPVPKITRRGGGS 128 Query: 121 ALPFKRRLFGQIVAAAVRGVE----GTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXX 176 ALP+KR LF IV AAVRG+E G IPVTVKFRIGIDD HHTHLD Sbjct: 129 ALPYKRNLFASIVDAAVRGIEDGGQGGRIPVTVKFRIGIDDEHHTHLDAGRIAAEQGAVA 188 Query: 177 XXXXXXXXXQRYSGTADWEQIALLKQHVR-----TVPVLGNGDIYDASDALAMMAATGCD 231 QRYSG ADW++IA LK+HV VPVLGNGDI+ A DA+ MM TGCD Sbjct: 189 VALHARTAAQRYSGQADWDEIARLKEHVHHHFGDAVPVLGNGDIFAAEDAVTMMDRTGCD 248 Query: 232 GVVIGRGCLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDI 291 GVV+GRGCLGRPWLF+ELSAA EVT+I+ RHGELLAAH GEDKGMR+I Sbjct: 249 GVVVGRGCLGRPWLFSELSAALNGTPMPTPPNLGEVTEIMYRHGELLAAHHGEDKGMREI 308 Query: 292 RKHVAWYLHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRV 351 RKHVAWYL GFPAG +LR LA VKTL +L +LL L DV FP+ A GPRGRQG+P +V Sbjct: 309 RKHVAWYLRGFPAGGELRTRLATVKTLTDLRALLDTLPRDVPFPKDAEGPRGRQGTPGKV 368 Query: 352 ALPEGWLDDP--DDCQVPDGADVMHSGG 377 LP+GWLDDP D GA+ SGG Sbjct: 369 VLPDGWLDDPWEADAAAMPGAETETSGG 396 >tr|Q4JXC2|Q4JXC2_CORJK Tax_Id=306537 SubName: Full=Putative uncharacterized protein;[Corynebacterium jeikeium] Length = 389 Score = 503 bits (1295), Expect = e-140 Identities = 250/379 (65%), Positives = 289/379 (76%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L+IG +EL SPVVLAPMAGVTNVAFR+LCRE E+ ++G+V+GLYVCEMVTARALVER+P Sbjct: 11 LKIGKMELDSPVVLAPMAGVTNVAFRSLCREQERERMGSVAGLYVCEMVTARALVERNPK 70 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTFAPDE PRSLQLYT DP+ TY AA+MI +E LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 71 TLHMTTFAPDEDPRSLQLYTTDPEYTYKAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 130 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KR+LFG IVAAAV+ EGTDIPVTVK R+GIDD HHTHLD Sbjct: 131 ALPYKRKLFGNIVAAAVKATEGTDIPVTVKMRVGIDDEHHTHLDAGRIAVEEGAAAVALH 190 Query: 181 XXXXXQRYSGTADWEQIALLKQHV--RTVPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSG ADW +IA LK+H+ +PVLGNGDI+ A+DA AMM TGCDGVV+GRG Sbjct: 191 GRTAAQRYSGHADWNEIARLKEHLAHTGIPVLGNGDIFKATDARAMMEQTGCDGVVVGRG 250 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAELSA EV II RH ELLAAH GE K RD+RKH+ WY Sbjct: 251 CLGRPWLFAELSAELRGLPIPSEPTLGEVARIILRHAELLAAHDGEQKACRDLRKHMTWY 310 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFPAG +LRR+L+ V +LDEL S L + A E A+G RGRQGSP++VALPEGWL Sbjct: 311 LRGFPAGGELRRSLSRVSSLDELKSALAEVWDSPALAEDADGARGRQGSPAKVALPEGWL 370 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VPDGAD+ +SGG Sbjct: 371 DDPEDETVPDGADIENSGG 389 >tr|C8RS32|C8RS32_CORJE Tax_Id=525262 SubName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-;[Corynebacterium jeikeium ATCC 43734] Length = 374 Score = 497 bits (1280), Expect = e-139 Identities = 247/374 (66%), Positives = 285/374 (76%), Gaps = 2/374 (0%) Query: 6 IELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPVTMHMT 65 +EL SPVVLAPMAGVTNVAFR+LCRE E+ ++G+V+GLYVCEMVTARALVER+P T+HMT Sbjct: 1 MELDSPVVLAPMAGVTNVAFRSLCREQERERMGSVAGLYVCEMVTARALVERNPKTLHMT 60 Query: 66 TFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGAALPFK 125 TFAPDE PRSLQLYT DP+ TY AA+MI +E LADHIDMNFGCPVPKVT+RGGG+ALP+K Sbjct: 61 TFAPDEDPRSLQLYTTDPEYTYKAAKMIVDENLADHIDMNFGCPVPKVTRRGGGSALPYK 120 Query: 126 RRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXXXXXXX 185 R+LFG IVAAAV+ EGTDIPVTVK R+GIDD HHTHLD Sbjct: 121 RKLFGNIVAAAVKATEGTDIPVTVKMRVGIDDEHHTHLDAGRIAVEEGAAAVALHGRTAA 180 Query: 186 QRYSGTADWEQIALLKQHV--RTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCLGRP 243 QRYSG ADW +IA LK+H+ +PVLGNGDI+ A+DA AMM TGCDGVV+GRGCLGRP Sbjct: 181 QRYSGHADWNEIARLKEHLAHTGIPVLGNGDIFKATDARAMMEQTGCDGVVVGRGCLGRP 240 Query: 244 WLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLHGFP 303 WLFAELSA EV II RH ELLAAH GE K RD+RKH+ WYL GFP Sbjct: 241 WLFAELSAELRGLPIPSEPTLGEVARIILRHAELLAAHDGEQKACRDLRKHMTWYLRGFP 300 Query: 304 AGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDDPDD 363 AG +LRR+L+ V +LDEL S L + A E A+G RGRQGSP++VALPEGWLDDP+D Sbjct: 301 AGGELRRSLSRVSSLDELKSALAEVWDSPALAEDADGARGRQGSPAKVALPEGWLDDPED 360 Query: 364 CQVPDGADVMHSGG 377 VPDGAD+ +SGG Sbjct: 361 ETVPDGADIENSGG 374 >tr|Q8NMK3|Q8NMK3_CORGL Tax_Id=1718 SubName: Full=Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family; SubName: Full=Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 family;[Corynebacterium glutamicum] Length = 381 Score = 495 bits (1275), Expect = e-138 Identities = 247/379 (65%), Positives = 281/379 (74%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L+IGP +LASPVVLAPMAGVTNVAFRTLCRE E + GT+SGLYVCEMVTARALVER+ Sbjct: 3 LKIGPFDLASPVVLAPMAGVTNVAFRTLCREQEMQRTGTISGLYVCEMVTARALVERNEK 62 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTFAPDE+PRSLQLYTVDP TY AA+MI +E LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 63 TMHMTTFAPDENPRSLQLYTVDPKYTYEAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 122 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 A+P+KRRLF IV+AAV+ EGTDIPVTVKFR+GIDD HHTHLD Sbjct: 123 AIPYKRRLFENIVSAAVKATEGTDIPVTVKFRVGIDDEHHTHLDAGRIAVDAGAKSVALH 182 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSG ADW +IA LK+H+ +PVLGNGDI+ ASDA MM TGCDGVV+GRG Sbjct: 183 ARTAAQRYSGEADWNEIARLKEHLADTGIPVLGNGDIFAASDATRMMEQTGCDGVVVGRG 242 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAELSAA EVT II RH ELL H GE KG+RD+RKH+ WY Sbjct: 243 CLGRPWLFAELSAAVRGEEIPEEPTFGEVTQIILRHAELLMQHDGETKGLRDLRKHMGWY 302 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G + R LA V T EL+ LL A E A G RGRQG+P++VALP+GWL Sbjct: 303 LRGFPVGGEFRSNLAKVSTYVELEDLLAPWADSTAKAEDAEGARGRQGAPAKVALPDGWL 362 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP GA++ +SGG Sbjct: 363 DDPEDATVPKGAEMENSGG 381 >tr|C2CTC8|C2CTC8_CORST Tax_Id=525268 SubName: Full=Possible tRNA-dihydrouridine synthase;[Corynebacterium striatum ATCC 6940] Length = 381 Score = 494 bits (1271), Expect = e-138 Identities = 247/379 (65%), Positives = 281/379 (74%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L IG IEL SPVVLAPMAGVTNVAFRTLCRE E K GTVSGLYVCEMVTARALVER+ Sbjct: 3 LAIGKIELNSPVVLAPMAGVTNVAFRTLCREQEIEKTGTVSGLYVCEMVTARALVERNEK 62 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTF P+E+PRSLQLYTVDP+ TY AA+MI +E LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 63 TMHMTTFGPEENPRSLQLYTVDPEYTYKAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 122 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFG I+AAAV+ EGTDIPVTVK R+GIDD HHTHLD Sbjct: 123 ALPYKRRLFGNIIAAAVKATEGTDIPVTVKMRVGIDDEHHTHLDAGRIAVEEGAAAVALH 182 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSG ADW +IA LK+H+ +PVLGNGDI+ A+DA AMM TGCDGVV+GRG Sbjct: 183 GRTAAQRYSGHADWNEIARLKEHLADSGIPVLGNGDIFKATDARAMMEQTGCDGVVVGRG 242 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAELSA EVT + RH ELLA H GE + RDIRKHV WY Sbjct: 243 CLGRPWLFAELSAELRGEPIPAEPTLGEVTKTMIRHAELLAQHDGERQASRDIRKHVGWY 302 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G ++R LA V+++D L LL A + A+G RGRQGSP++V LPEGWL Sbjct: 303 LRGFPVGGEVRSGLARVESVDNLRELLAPWANSQALADDADGARGRQGSPAKVVLPEGWL 362 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP+GA++MHSGG Sbjct: 363 DDPEDATVPEGAEIMHSGG 381 >tr|C0E5G0|C0E5G0_9CORY Tax_Id=566549 SubName: Full=Putative uncharacterized protein;[Corynebacterium matruchotii ATCC 33806] Length = 384 Score = 492 bits (1266), Expect = e-137 Identities = 246/379 (64%), Positives = 278/379 (73%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L IG I+LASPV+LAPMAGVTNVAFRTLCRE E AK GTVSGLYVCEM+TARALVE + Sbjct: 6 LTIGSIKLASPVILAPMAGVTNVAFRTLCREQELAKTGTVSGLYVCEMITARALVEGNEK 65 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T HMTTF PDE PRSLQ YT DP+ TY AARM+A+ LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 66 TRHMTTFGPDEHPRSLQFYTTDPEYTYKAARMVADNNLADHIDMNFGCPVPKVTRRGGGS 125 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFG IVAAAV+ V GTDIP+TVKFRIGIDD HHTHLD Sbjct: 126 ALPYKRRLFGNIVAAAVKAVAGTDIPITVKFRIGIDDDHHTHLDAGRIAAAEGAAAVALH 185 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSGTADW QI LK+H+ +PVLGNGD++ A+DA MM TGCDGVV+GRG Sbjct: 186 ARTAAQRYSGTADWSQITALKEHLADTGIPVLGNGDVFQATDAQKMMTETGCDGVVVGRG 245 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAELSAA EVT II RH ELL + GEDK RD+RKH+ WY Sbjct: 246 CLGRPWLFAELSAALRGVDIPPEPTLGEVTGIILRHAELLTHYDGEDKACRDLRKHMGWY 305 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G LR L+ +KTL +L + L A A+G RGRQGSP++V LPEGWL Sbjct: 306 LRGFPVGGPLRVQLSAIKTLADLRAALEPWRESPALATDADGVRGRQGSPAKVILPEGWL 365 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP+GAD+MHSGG Sbjct: 366 DDPEDETVPEGADIMHSGG 384 >tr|C5VFJ9|C5VFJ9_9CORY Tax_Id=553207 SubName: Full=Putative tRNA-dihydrouridine synthase;[Corynebacterium matruchotii ATCC 14266] Length = 384 Score = 491 bits (1265), Expect = e-137 Identities = 247/379 (65%), Positives = 278/379 (73%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L IG I+LASPV+LAPMAGVTNVAFRTLCRE E AK GTVSGLYVCEM+TARALVE + Sbjct: 6 LTIGSIKLASPVILAPMAGVTNVAFRTLCREQELAKTGTVSGLYVCEMITARALVEGNEK 65 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T HMTTF PDE PRSLQ YT DP+ TY AARM+A+ LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 66 TRHMTTFGPDEHPRSLQFYTTDPEYTYKAARMVADNNLADHIDMNFGCPVPKVTRRGGGS 125 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFG IVAAAV+ V GT+IP+TVKFRIGIDD HHTHLD Sbjct: 126 ALPYKRRLFGNIVAAAVKAVAGTNIPITVKFRIGIDDDHHTHLDAGRIAAAEGAAAVALH 185 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSGTADW QIA LK+H+ +PVLGNGDI+ A+DA MM TGCDGVV+GRG Sbjct: 186 ARTAAQRYSGTADWSQIAALKEHLADTGIPVLGNGDIFQATDAQKMMTETGCDGVVVGRG 245 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAELSAA EVT II RH ELL + GEDK RD+RKH+ WY Sbjct: 246 CLGRPWLFAELSAALRGVDIPPEPTLGEVTGIILRHAELLTHYDGEDKACRDLRKHMGWY 305 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G LR L+ +KTL +L + L A A+G RGRQGSP++V LPEGWL Sbjct: 306 LRGFPVGGPLRAQLSAIKTLADLRAALEPWRESPALATDADGVRGRQGSPAKVILPEGWL 365 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP GAD+MHSGG Sbjct: 366 DDPEDETVPKGADIMHSGG 384 >tr|Q8FMP2|Q8FMP2_COREF Tax_Id=152794 SubName: Full=Putative transcription regulator;[Corynebacterium efficiens] Length = 381 Score = 486 bits (1252), Expect = e-135 Identities = 245/379 (64%), Positives = 279/379 (73%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L+IGP +LASPV+LAPMAGVTNVAFRTLCRE E + GT+SGLYVCEMVTARALVER+ Sbjct: 3 LKIGPFDLASPVILAPMAGVTNVAFRTLCREQEMQRTGTISGLYVCEMVTARALVERNEK 62 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTFAPDE+PRSLQLYTVDP TY AA+MI +E LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 63 TLHMTTFAPDENPRSLQLYTVDPQYTYEAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 122 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 A+P+KRRLF IV+AAVR EGTDIPVTVKFR+GIDD HHTHLD Sbjct: 123 AIPYKRRLFENIVSAAVRATEGTDIPVTVKFRVGIDDEHHTHLDAGRIAVDAGAKSVALH 182 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSG ADW +IA LK+H+ VPVLGNGDI+ A DA MM TGCDGVV+GRG Sbjct: 183 ARTAAQRYSGQADWNEIARLKEHLADTGVPVLGNGDIFAAEDATRMMEQTGCDGVVVGRG 242 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAELSAA EVT II RH ELL H GE KG+RD+RKH+ WY Sbjct: 243 CLGRPWLFAELSAAVRGEPIPEEPTLGEVTRIILRHAELLMQHDGELKGIRDLRKHMGWY 302 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G + R LA V T EL LL A E A+G RGR+GS ++VALP+GWL Sbjct: 303 LRGFPVGGEFRANLARVSTYAELGELLAPWGTSTARAEDADGARGRKGSSAKVALPDGWL 362 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP GA++ +SGG Sbjct: 363 DDPEDDTVPVGAEMENSGG 381 >tr|C8NK90|C8NK90_COREF Tax_Id=196164 SubName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-;[Corynebacterium efficiens YS-314] Length = 381 Score = 486 bits (1252), Expect = e-135 Identities = 245/379 (64%), Positives = 279/379 (73%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L+IGP +LASPV+LAPMAGVTNVAFRTLCRE E + GT+SGLYVCEMVTARALVER+ Sbjct: 3 LKIGPFDLASPVILAPMAGVTNVAFRTLCREQEMQRTGTISGLYVCEMVTARALVERNEK 62 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTFAPDE+PRSLQLYTVDP TY AA+MI +E LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 63 TLHMTTFAPDENPRSLQLYTVDPQYTYEAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 122 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 A+P+KRRLF IV+AAVR EGTDIPVTVKFR+GIDD HHTHLD Sbjct: 123 AIPYKRRLFENIVSAAVRATEGTDIPVTVKFRVGIDDEHHTHLDAGRIAVDAGAKSVALH 182 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSG ADW +IA LK+H+ VPVLGNGDI+ A DA MM TGCDGVV+GRG Sbjct: 183 ARTAAQRYSGQADWNEIARLKEHLADTGVPVLGNGDIFAAEDATRMMEQTGCDGVVVGRG 242 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAELSAA EVT II RH ELL H GE KG+RD+RKH+ WY Sbjct: 243 CLGRPWLFAELSAAVRGEPIPEEPTLGEVTRIILRHAELLMQHDGELKGIRDLRKHMGWY 302 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G + R LA V T EL LL A E A+G RGR+GS ++VALP+GWL Sbjct: 303 LRGFPVGGEFRANLARVSTYAELGELLAPWGTSTARAEDADGARGRKGSSAKVALPDGWL 362 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP GA++ +SGG Sbjct: 363 DDPEDDTVPVGAEMENSGG 381 >tr|C0WH14|C0WH14_9CORY Tax_Id=525260 SubName: Full=Dihydrouridine synthase;[Corynebacterium accolens ATCC 49725] Length = 381 Score = 482 bits (1241), Expect = e-134 Identities = 243/379 (64%), Positives = 278/379 (73%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIG +L+SPV+LAPMAGVTNVAFRTLCRE E A+ GTVSGLYVCEMVTARALVER+ Sbjct: 3 LRIGNYDLSSPVILAPMAGVTNVAFRTLCREQELARTGTVSGLYVCEMVTARALVERNEK 62 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHMTTFAP+E PRSLQ+YTVDP+ TY AA++I +E LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 63 TMHMTTFAPNEDPRSLQIYTVDPEYTYKAAKIIVDENLADHIDMNFGCPVPKVTRRGGGS 122 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFG IV+AAV+ EGT+IPVTVK R+GIDD HHTHLD Sbjct: 123 ALPYKRRLFGNIVSAAVKATEGTNIPVTVKMRVGIDDEHHTHLDAGRIAVDSGAAAVTLH 182 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSG A W++IA LK+H+ VPVLGNGDI+ A DA MM ATGCDGV +GRG Sbjct: 183 GRTAAQRYSGDARWDEIARLKEHLADTGVPVLGNGDIFRADDARRMMEATGCDGVQVGRG 242 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAEL AA EVT +I RH ELLA H GED RDIRKH+ WY Sbjct: 243 CLGRPWLFAELGAALRGESIPAEPTLGEVTQVILRHAELLAQHEGEDHASRDIRKHIGWY 302 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G +R LA V +L+ L LL A A+G RGRQGSPS+VALP+GWL Sbjct: 303 LRGFPVGGQVRAGLAKVDSLESLRELLAPWADSDALAADADGARGRQGSPSKVALPDGWL 362 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP GAD+ +SGG Sbjct: 363 DDPEDEFVPVGADIYNSGG 381 >tr|C3PIT8|C3PIT8_CORA7 Tax_Id=548476 SubName: Full=Putative uncharacterized protein;[Corynebacterium aurimucosum] Length = 381 Score = 481 bits (1239), Expect = e-134 Identities = 242/379 (63%), Positives = 277/379 (73%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L IG I+L SPVVLAPMAGVTNVAFR LCRE E K GTVSGLYVCEMVTARALVER+P Sbjct: 3 LAIGKIQLNSPVVLAPMAGVTNVAFRVLCREQEIEKTGTVSGLYVCEMVTARALVERNPK 62 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTF P E PRSLQLYTVDP+ TY AA+MI +E LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 63 TLHMTTFDPQEQPRSLQLYTVDPEYTYKAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 122 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFG IVAAAV+ EGTDIPVTVK R+GID+ H THLD Sbjct: 123 ALPYKRRLFGNIVAAAVKATEGTDIPVTVKMRVGIDEEHKTHLDAGRIAVAEGAAAVALH 182 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSG ADW +IA LK+H+ +PVLGNGDI+ A+DA MM TGCDGVV+GRG Sbjct: 183 GRTAAQRYSGHADWGEIARLKEHLADTGIPVLGNGDIFKATDAHDMMKQTGCDGVVVGRG 242 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAELSA EVT I+ RH ELLA H GE + RDIRKH+ WY Sbjct: 243 CLGRPWLFAELSAHLRGEPVPEEPTLGEVTRIMIRHAELLAQHEGEAQASRDIRKHIGWY 302 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G +R L+ V +L++L LL A + A+G RGRQGSP++V LPEGWL Sbjct: 303 LRGFPVGGQVRAGLSRVNSLNDLRELLAPWADSPALADDADGARGRQGSPAKVVLPEGWL 362 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP+GA++MHSGG Sbjct: 363 DDPEDATVPEGAEIMHSGG 381 >tr|B1VII2|B1VII2_CORU7 Tax_Id=504474 SubName: Full=Putative uncharacterized protein;[Corynebacterium urealyticum] Length = 442 Score = 481 bits (1238), Expect = e-134 Identities = 241/378 (63%), Positives = 281/378 (74%), Gaps = 1/378 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L IG ++L SPVVLAPMAGVTNVAFRTLCRE E+ ++G+V+GLYVCEMVTARALVER+P Sbjct: 65 LSIGTLKLDSPVVLAPMAGVTNVAFRTLCREQERERMGSVAGLYVCEMVTARALVERNPK 124 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTFAPDE PRSLQLYT DP TY AA+MI +E +ADHIDMNFGCP+PKVT+RGGGA Sbjct: 125 TLHMTTFAPDEDPRSLQLYTTDPKYTYEAAKMIVDENMADHIDMNFGCPMPKVTRRGGGA 184 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFG IVAAAV+ EGTDIPVTVK RIGIDD H THLD Sbjct: 185 ALPYKRRLFGNIVAAAVKATEGTDIPVTVKMRIGIDDEHRTHLDAGRIAADEGAAAVALH 244 Query: 181 XXXXXQRYSGTADWEQIALLKQHV-RTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGC 239 QRY+G ADW +IA L +H+ VPVLGNGDI+ A+DA AMM TGCDGVV+GRGC Sbjct: 245 GRTAAQRYAGDADWSEIARLVEHMDGRVPVLGNGDIFKATDARAMMDQTGCDGVVVGRGC 304 Query: 240 LGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYL 299 LGRPWLFAELSA EV II RH ELLA H GED+ RD+RKH+ WY+ Sbjct: 305 LGRPWLFAELSAELRGLPVPAEPPLGEVARIIMRHAELLAEHDGEDRACRDLRKHMTWYM 364 Query: 300 HGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLD 359 GFPAG +LRR+L+ V +L EL +L + A A+G RGRQGSP++V LP+GWLD Sbjct: 365 RGFPAGGELRRSLSKVSSLAELREVLDPIWDSEALANDADGARGRQGSPAKVQLPDGWLD 424 Query: 360 DPDDCQVPDGADVMHSGG 377 DP+D VP GAD+ +SGG Sbjct: 425 DPEDETVPVGADIENSGG 442 >tr|A4FQC1|A4FQC1_SACEN Tax_Id=405948 SubName: Full=Dihydrouridine synthase TIM-barrel protein nifR3;[Saccharopolyspora erythraea] Length = 387 Score = 480 bits (1236), Expect = e-133 Identities = 240/377 (63%), Positives = 272/377 (72%), Gaps = 7/377 (1%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGP ++ PVVLAPMAG+TNVAFR LCRE +GLYVCEM+T+RALVERHP Sbjct: 18 LRIGPYQVDPPVVLAPMAGITNVAFRWLCREYG-------AGLYVCEMITSRALVERHPT 70 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TM M TF PDE PRS+QLY VDP+T A RMI EEGLADH+DMNFGCPVPKVT++GGG+ Sbjct: 71 TMQMVTFDPDEHPRSMQLYGVDPETMGQAVRMIVEEGLADHVDMNFGCPVPKVTRKGGGS 130 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFG+IV AAVR E +PVTVKFRIGIDD H T+LD Sbjct: 131 ALPYKRRLFGEIVRAAVRAAEPAGVPVTVKFRIGIDDEHITYLDAGRIAEDNGAAAVALH 190 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSG ADW IA LK+ VRT+PVLGNGDI+ A DAL M+A TGCDGVV+GRGCL Sbjct: 191 GRTAAQRYSGQADWSAIARLKETVRTIPVLGNGDIFSADDALRMVAETGCDGVVVGRGCL 250 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLF +L AAF EV ++RRHGELLA H GE+KG+RD+RKH+A YL Sbjct: 251 GRPWLFRDLQAAFAGEPVPEGPNLGEVCRVLRRHGELLADHMGEEKGLRDLRKHMAQYLR 310 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFP GSDLR LV L ELD LL +LD +V FP A GPRGRQGS RV LPEGWLDD Sbjct: 311 GFPVGSDLRHRFGLVSGLAELDDLLAQLDHEVPFPVDAEGPRGRQGSAGRVVLPEGWLDD 370 Query: 361 PDDCQVPDGADVMHSGG 377 PDD VP A++ HSGG Sbjct: 371 PDDLCVPTAAEIDHSGG 387 >tr|C2BMH5|C2BMH5_9CORY Tax_Id=525264 SubName: Full=Possible dihydrouridine synthase;[Corynebacterium pseudogenitalium ATCC 33035] Length = 379 Score = 480 bits (1235), Expect = e-133 Identities = 241/379 (63%), Positives = 275/379 (72%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 +RIG +L+SPV+LAPMAGVTNVAFRTLCRE E + GTVSGLYVCEMVTARALVER+ Sbjct: 1 MRIGHYDLSSPVILAPMAGVTNVAFRTLCREQELQRTGTVSGLYVCEMVTARALVERNEK 60 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTFAP E PRSLQ+YTVDP+ TY AA+MI +E LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 61 TLHMTTFAPQEDPRSLQIYTVDPEYTYKAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 120 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFG IV+AAV+ EGT+IPVTVK R+GIDD HHTHLD Sbjct: 121 ALPYKRRLFGNIVSAAVKATEGTNIPVTVKMRVGIDDEHHTHLDAGRIAVESGAAAVTLH 180 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSG A W++IA LK+H+ VPVLGNGDI+ A DA MM TGCDGV +GRG Sbjct: 181 GRTAAQRYSGEARWDEIARLKEHLADTGVPVLGNGDIFRAEDARRMMEQTGCDGVQVGRG 240 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAEL AA EVT +I RH ELLA H GED RDIRKH+ WY Sbjct: 241 CLGRPWLFAELGAALRGESIPAEPTLGEVTQVILRHAELLAEHDGEDNASRDIRKHIGWY 300 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G +R LA V +LD L LL A A+G RGRQGSPS+VALP+GWL Sbjct: 301 LRGFPVGGQVRAGLAKVNSLDALRELLAPWAESDALAADADGARGRQGSPSKVALPDGWL 360 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP AD+M+SGG Sbjct: 361 DDPEDDCVPVAADIMNSGG 379 >tr|C6RCI7|C6RCI7_9CORY Tax_Id=553206 SubName: Full=Dihydrouridine synthase TIM-barrel protein nifR3;[Corynebacterium tuberculostearicum SK141] Length = 379 Score = 479 bits (1233), Expect = e-133 Identities = 240/379 (63%), Positives = 275/379 (72%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 +RIG +L+SPV+LAPMAGVTNVAFRTLCRE E + GTVSGLYVCEMVTARALVER+ Sbjct: 1 MRIGHYDLSSPVILAPMAGVTNVAFRTLCREQELQRTGTVSGLYVCEMVTARALVERNEK 60 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTFAP E PRSLQ+YTVDP+ TY AA+MI +E LADHIDMNFGCPVPKVT+RGGG+ Sbjct: 61 TLHMTTFAPQEDPRSLQIYTVDPEYTYKAAKMIVDENLADHIDMNFGCPVPKVTRRGGGS 120 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFG IV+AAV+ EGT+IPVTVK R+GIDD HHTHLD Sbjct: 121 ALPYKRRLFGNIVSAAVKATEGTNIPVTVKMRVGIDDEHHTHLDAGRIAVESGAAAVTLH 180 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSG A W++IA LK+H+ VPVLGNGDI+ A DA MM TGCDGV +GRG Sbjct: 181 GRTAAQRYSGEARWDEIARLKEHLADTGVPVLGNGDIFRAEDARRMMEQTGCDGVQVGRG 240 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFAEL AA EVT +I RH ELLA H GED RDIRKH+ WY Sbjct: 241 CLGRPWLFAELGAALRGESIPAEPTLGEVTQVILRHAELLAEHDGEDNASRDIRKHIGWY 300 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G +R LA V ++D L LL A A+G RGRQGSPS+VALP+GWL Sbjct: 301 LRGFPVGGQVRAGLAKVSSIDALRELLAPWAESDALAADADGARGRQGSPSKVALPDGWL 360 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP AD+M+SGG Sbjct: 361 DDPEDDCVPVAADIMNSGG 379 >tr|A4QGW8|A4QGW8_CORGB Tax_Id=340322 SubName: Full=Putative uncharacterized protein;[Corynebacterium glutamicum] Length = 363 Score = 469 bits (1208), Expect = e-130 Identities = 234/363 (64%), Positives = 266/363 (73%), Gaps = 2/363 (0%) Query: 17 MAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPVTMHMTTFAPDESPRSL 76 MAGVTNVAFRTLCRE E + GT+SGLYVCEMVTARALVER+ TMHMTTFAPDE+PRSL Sbjct: 1 MAGVTNVAFRTLCREQEMQRTGTISGLYVCEMVTARALVERNEKTMHMTTFAPDENPRSL 60 Query: 77 QLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAA 136 QLYTVDP TY AA+MI +E LADHIDMNFGCPVPKVT+RGGG+A+P+KRRLF IV+AA Sbjct: 61 QLYTVDPKYTYEAAKMIVDENLADHIDMNFGCPVPKVTRRGGGSAIPYKRRLFENIVSAA 120 Query: 137 VRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXXXXXXXQRYSGTADWEQ 196 V+ EGTDIPVTVKFR+GIDD HHTHLD QRYSG ADW + Sbjct: 121 VKATEGTDIPVTVKFRVGIDDEHHTHLDAGRIAVDAGAKSVALHARTAAQRYSGEADWNE 180 Query: 197 IALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRGCLGRPWLFAELSAAFX 254 IA LK+H+ +PVLGNGDI+ ASDA MM TGCDGVV+GRGCLGRPWLFAELSAA Sbjct: 181 IARLKEHLADTGIPVLGNGDIFAASDATRMMEQTGCDGVVVGRGCLGRPWLFAELSAAVR 240 Query: 255 XXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLHGFPAGSDLRRALAL 314 EVT II RH ELL H GE KG+RD+RKH+ WYL GFP G + R LA Sbjct: 241 GEEIPEEPTFGEVTQIILRHAELLMQHDGETKGLRDLRKHMGWYLRGFPVGGEFRSNLAK 300 Query: 315 VKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDDPDDCQVPDGADVMH 374 V T EL+ LL A E A G RGRQG+P++VALP+GWLDDP+D VP GA++ + Sbjct: 301 VSTYVELEDLLAPWADSTAKAEDAEGARGRQGAPAKVALPDGWLDDPEDATVPKGAEMEN 360 Query: 375 SGG 377 SGG Sbjct: 361 SGG 363 >tr|C7MRB7|C7MRB7_SACVD Tax_Id=471857 SubName: Full=Putative TIM-barrel protein, nifR3 family;[Saccharomonospora viridis] Length = 379 Score = 468 bits (1205), Expect = e-130 Identities = 233/377 (61%), Positives = 265/377 (70%), Gaps = 7/377 (1%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGP ++ PVVLAPMAG+TNVAFR LCRE +GLYVCEM+TARA+VERHP Sbjct: 10 LRIGPYQVDPPVVLAPMAGITNVAFRRLCREYG-------AGLYVCEMITARAVVERHPG 62 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TMHM TF E PRS+QLY VDP T A ++I EGLADHID NFGCPV KVT++GGGA Sbjct: 63 TMHMMTFDASEYPRSMQLYGVDPATMKEAVKIIVGEGLADHIDANFGCPVAKVTRKGGGA 122 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALPFKR+LFG IV A+V E +P TVKFR+GIDD HHT+LD Sbjct: 123 ALPFKRKLFGNIVRASVEAAEPAGVPFTVKFRVGIDDDHHTYLDAGRIAEAEGAAAVALH 182 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSG ADW IA LK+ V ++PVLGNGDI+ A DAL M+A TGCDGVVIGRGCL Sbjct: 183 ARTAAQRYSGKADWSHIARLKEAVTSIPVLGNGDIFTAHDALRMVAETGCDGVVIGRGCL 242 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLF EL AAF EV ++RRH ELL H G DK MRD+RKH+AWY Sbjct: 243 GRPWLFGELEAAFAGKPIPAGPNLGEVARVLRRHAELLVEHDGPDKAMRDLRKHMAWYFM 302 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFP GS LRR A+V +LDELD L+ +LD D FP A GPRGRQGSP +V LP GWLDD Sbjct: 303 GFPVGSQLRRRFAMVSSLDELDELIAQLDHDAPFPADALGPRGRQGSPGKVTLPHGWLDD 362 Query: 361 PDDCQVPDGADVMHSGG 377 PDD VP+GAD+MHSGG Sbjct: 363 PDDPCVPEGADIMHSGG 379 >tr|Q6NFI5|Q6NFI5_CORDI Tax_Id=1717 SubName: Full=Putative exported protein;[Corynebacterium diphtheriae] Length = 383 Score = 467 bits (1202), Expect = e-130 Identities = 233/379 (61%), Positives = 274/379 (72%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L IG + L S V LAPMAGVTN+AFRTLCRE E + GTVSGLY+CEM+TARALVER+ Sbjct: 5 LTIGSLALDSVVALAPMAGVTNIAFRTLCREQELERTGTVSGLYICEMITARALVERNEK 64 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTF P E RSLQLYTVDP+ TY AA+MIAE +ADHIDMNFGCPVPKVTKRGGG+ Sbjct: 65 TLHMTTFGPQEDIRSLQLYTVDPEYTYKAAKMIAENNMADHIDMNFGCPVPKVTKRGGGS 124 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KRRLFG IVAAAV+GVEGTDIP+TVKFR+GIDD H T+LD Sbjct: 125 ALPYKRRLFGNIVAAAVKGVEGTDIPITVKFRMGIDDDHLTYLDAGRIAAEEGAAAVTLH 184 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRT--VPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 +RYSG A W+ I LK+H+R +PVLGNGDI+ A DA AM+ A+GCDGVV+GRG Sbjct: 185 ARTAAERYSGDAHWDAIGTLKEHMRDSGIPVLGNGDIFKAEDAKAMLDASGCDGVVVGRG 244 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFA +SAA EVT II RH ELLA H GE K RD+RKH+ WY Sbjct: 245 CLGRPWLFAGISAALRGEELPPEPTLGEVTRIIYRHAELLAEHDGEKKASRDMRKHMGWY 304 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 + GFP G + R ALA + +L EL +L A ++ RGRQGSP++VALP+GWL Sbjct: 305 MRGFPVGGEFRGALARINSLAELREVLAPFADSNALAADSDSARGRQGSPAKVALPDGWL 364 Query: 359 DDPDDCQVPDGADVMHSGG 377 DPDD VP+GA++MHSGG Sbjct: 365 ADPDDATVPEGAEIMHSGG 383 >tr|Q5Z290|Q5Z290_NOCFA Tax_Id=37329 SubName: Full=Putative dihydrouridine synthase;[Nocardia farcinica] Length = 382 Score = 458 bits (1178), Expect = e-127 Identities = 228/377 (60%), Positives = 264/377 (70%), Gaps = 5/377 (1%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIGP + PVVLAPMAG+TN+AFR LCRE G+ + +YVCEM+TARA+VER+ Sbjct: 11 LRIGPYPVDPPVVLAPMAGITNLAFRKLCREF-----GSATSIYVCEMITARAVVERNEK 65 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HM +F DE PRS+QLY VDP T A R+I EG ADHIDMN GCPVPKVT+ GGGA Sbjct: 66 TLHMMSFDADEHPRSMQLYGVDPQTLGEAVRIIVGEGWADHIDMNLGCPVPKVTRLGGGA 125 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KR LF +IV A V E +PVTVKFRIGIDD HHT+LD Sbjct: 126 ALPYKRALFARIVRAMVAAAEPAGVPVTVKFRIGIDDDHHTYLDTGRIAEAEGARAVSLH 185 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSG ADW IA LK+ V T+PVLGNGDI+ A DA+ MMA TGCDGVV+GRGCL Sbjct: 186 ARTAAQRYSGQADWSAIARLKEAVTTIPVLGNGDIFAAEDAVRMMAETGCDGVVVGRGCL 245 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLFAEL AA V +++ RHG LL+ H GEDK MRD+RKH+AWYL Sbjct: 246 GRPWLFAELQAALRGQPLPEPPNLGRVGEVLYRHGALLSEHLGEDKAMRDLRKHMAWYLM 305 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFP G+DLRR+ A V +L +L L+ RLDP FP+ A GPRGRQGSP +VALP GWLDD Sbjct: 306 GFPVGADLRRSFATVSSLAQLRDLIGRLDPTAPFPKDAEGPRGRQGSPGKVALPHGWLDD 365 Query: 361 PDDCQVPDGADVMHSGG 377 PDD VP ADVMHSGG Sbjct: 366 PDDPAVPTAADVMHSGG 382 >tr|C4LH79|C4LH79_CORK4 Tax_Id=645127 SubName: Full=Putative uncharacterized protein;[Corynebacterium kroppenstedtii] Length = 361 Score = 451 bits (1160), Expect = e-125 Identities = 230/361 (63%), Positives = 263/361 (72%), Gaps = 6/361 (1%) Query: 23 VAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPVTMHMTTFAPDESPRSLQLYTVD 82 +AFR LCRELE K GT SGLYVCEMVTARALVER+ T+HMT FAP+E+PRS+QLYT D Sbjct: 1 MAFRLLCRELEIEKTGTTSGLYVCEMVTARALVERNEKTLHMTEFAPEETPRSMQLYTTD 60 Query: 83 PDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRGVEG 142 P TY AARMIA++ LADHIDMNFGCPVPKVT+RGGGAALP+KRRLFG+IVAAAVRGVEG Sbjct: 61 PKWTYEAARMIADDNLADHIDMNFGCPVPKVTRRGGGAALPYKRRLFGEIVAAAVRGVEG 120 Query: 143 TDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXXXXXXXQRYSGTADWEQIALLKQ 202 T IPVTVK R GIDD H T LD QRYSGTADW +I LK+ Sbjct: 121 TTIPVTVKMRTGIDDDHLTFLDAGAIAAAEGAQAVALHARTAAQRYSGTADWNRIGELKE 180 Query: 203 HV--RTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCLGRPWLFAELSAAFXXXXXXX 260 H+ VPVLGNGDI+ A+DA MM TGCDGVV+GRGCLGRPWLFAELSAA Sbjct: 181 HLSGTGVPVLGNGDIFKATDAADMMDQTGCDGVVVGRGCLGRPWLFAELSAALRGEPLPA 240 Query: 261 XXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLHGFPAGSDLRRALALVKTLDE 320 EV D+I RH LLAAH GE RD+RKH+ WYL G+PAGSDLR+ + + +++E Sbjct: 241 QPTFAEVCDVILRHTRLLAAHSGESTACRDMRKHMGWYLRGYPAGSDLRQKVTRITSINE 300 Query: 321 LDSLLTRL--DPDV--AFPEAANGPRGRQGSPSRVALPEGWLDDPDDCQVPDGADVMHSG 376 L +L + DP + A P+ A+GPRGRQGS V LPEGWLDDPDD VP GAD+MHSG Sbjct: 301 LKEILNTVVSDPALASALPDDADGPRGRQGSAKAVTLPEGWLDDPDDRTVPAGADIMHSG 360 Query: 377 G 377 G Sbjct: 361 G 361 >tr|C8NYZ4|C8NYZ4_9CORY Tax_Id=585529 (dusB)SubName: Full=tRNA-dihydrouridine synthase B; EC=1.-.-.-;[Corynebacterium genitalium ATCC 33030] Length = 388 Score = 450 bits (1157), Expect = e-124 Identities = 224/379 (59%), Positives = 275/379 (72%), Gaps = 3/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIG IELASPV+LAPMAGVT++ FR LCRE+E+ GTVSGLYVCEM+TARALVE + Sbjct: 11 LRIGGIELASPVILAPMAGVTDMPFRVLCREIEEDLTGTVSGLYVCEMITARALVEGNEK 70 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTFAP E+PRS+QLYTVDP+ TY A RMI E +ADH+DMNFGCPVPKVT+RGGG+ Sbjct: 71 TLHMTTFAPQETPRSMQLYTVDPEYTYKAVRMIVEGDMADHVDMNFGCPVPKVTRRGGGS 130 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 A+P+KR L+ IV+AAV+ +G +PVTVKFR+GIDD H THLD Sbjct: 131 AIPYKRGLYRNIVSAAVKAADGR-VPVTVKFRVGIDDEHKTHLDAGRIAAEEGASAVTLH 189 Query: 181 XXXXXQRYSGTADWEQIALLKQHV--RTVPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSGTADW++I+ L +H+ +PVLGNGDI+ ++DA MM T CDGVV+GRG Sbjct: 190 ARTAAQRYSGTADWDEISRLVEHMDGTGIPVLGNGDIFASTDAEEMMERTACDGVVVGRG 249 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFA+LSA +V I+ RHGELLAAH GE++G R++RKHV WY Sbjct: 250 CLGRPWLFAQLSAQLRGEVVPAEPTLGQVARIMARHGELLAAHNGEERGCRELRKHVGWY 309 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G R LA V TL+EL S L+ + A EAA+ RGR+GS ++V LPEGWL Sbjct: 310 LRGFPVGGQFRSELARVSTLEELHSHLSAIFDSDAMAEAADEARGRKGSSAKVVLPEGWL 369 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP GA++ +SGG Sbjct: 370 DDPEDDAVPVGAEIENSGG 388 >tr|C6WPQ6|C6WPQ6_ACTMD Tax_Id=446462 SubName: Full=TIM-barrel protein, nifR3 family; Flags: Precursor;[Actinosynnema mirum] Length = 393 Score = 445 bits (1145), Expect = e-123 Identities = 225/377 (59%), Positives = 264/377 (70%), Gaps = 6/377 (1%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 L+IG + VVLAPMAG+TN+AFR LCRE G+ LYVCEM+TARA+VER Sbjct: 23 LKIGRYSVDPAVVLAPMAGITNIAFRQLCREF-----GSPGSLYVCEMITARAVVERDSK 77 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 TM M F PDE PRS+QLY+VDP + A ++I E ADHIDMNFGCPVPKVT++GGGA Sbjct: 78 TMEMLAFGPDEHPRSMQLYSVDPVSMSEAVKLITGEDRADHIDMNFGCPVPKVTRKGGGA 137 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 ALP+KR+LF +IV AAVR E +PVTVKFRIGIDD H T+LD Sbjct: 138 ALPYKRKLFREIVRAAVRAAEPAGVPVTVKFRIGIDDEHLTYLDAGRIAEDEGAQAVALH 197 Query: 181 XXXXXQRYSGTADWEQIALLKQHVRTVPVLGNGDIYDASDALAMMAATGCDGVVIGRGCL 240 QRYSGTADW I LK+ V ++PVLGNGDI+ A DAL M+A TGCDGVV+GRGCL Sbjct: 198 ARTAAQRYSGTADWSAITRLKEAVTSIPVLGNGDIFSARDALDMVARTGCDGVVVGRGCL 257 Query: 241 GRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWYLH 300 GRPWLF EL AAF +V DI+ RHG LLA H GE+KG+RD+RKH+AWYL Sbjct: 258 GRPWLFGELQAAFRGEPLPAPPTLGKVADILWRHGALLADHLGEEKGVRDLRKHMAWYLK 317 Query: 301 GFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWLDD 360 GFP G DLRR+LA+V TL EL L+ LD P A+GPRGRQGSP+RV LPEGWLDD Sbjct: 318 GFPVGGDLRRSLAMVSTLAELQDLVGLLDRTAEHPSDADGPRGRQGSPARVILPEGWLDD 377 Query: 361 PDDCQVPDGADVMHSGG 377 P+D VP+ A+ MHSGG Sbjct: 378 PEDAAVPE-AEEMHSGG 393 >tr|C0XPC3|C0XPC3_9CORY Tax_Id=525263 SubName: Full=Possible dihydrouridine synthase;[Corynebacterium lipophiloflavum DSM 44291] Length = 393 Score = 437 bits (1124), Expect = e-120 Identities = 220/379 (58%), Positives = 260/379 (68%), Gaps = 2/379 (0%) Query: 1 LRIGPIELASPVVLAPMAGVTNVAFRTLCRELEQAKVGTVSGLYVCEMVTARALVERHPV 60 LRIG L SPV+LAPMAGVTN+ FR LCRE+E+ GT SGLYVCEM+TARALV R+ Sbjct: 15 LRIGDFTLNSPVILAPMAGVTNMPFRVLCREIEEELTGTSSGLYVCEMITARALVARNQK 74 Query: 61 TMHMTTFAPDESPRSLQLYTVDPDTTYAAARMIAEEGLADHIDMNFGCPVPKVTKRGGGA 120 T+HMTTFA E+PRSLQLYTVDP TY A RMI EE +ADH+DMNFGCPVPKVT++GGG+ Sbjct: 75 TLHMTTFADVETPRSLQLYTVDPKFTYDAVRMIVEEDIADHVDMNFGCPVPKVTRKGGGS 134 Query: 121 ALPFKRRLFGQIVAAAVRGVEGTDIPVTVKFRIGIDDAHHTHLDXXXXXXXXXXXXXXXX 180 A+PFKRRL+ IV+AAVR EG+ IP+TVKFRIGIDDAHHTHLD Sbjct: 135 AIPFKRRLYANIVSAAVRAAEGSGIPITVKFRIGIDDAHHTHLDAGRIAAEEGAAAVALH 194 Query: 181 XXXXXQRYSGTADWEQIALLKQHV--RTVPVLGNGDIYDASDALAMMAATGCDGVVIGRG 238 QRYSG A W +I L +H+ VPV+GNGDI+ A DA M+ T C GV +GRG Sbjct: 195 ARTADQRYSGQAHWSEIRRLVEHMDGSGVPVIGNGDIFAADDAEKMLETTNCHGVEVGRG 254 Query: 239 CLGRPWLFAELSAAFXXXXXXXXXXXXEVTDIIRRHGELLAAHFGEDKGMRDIRKHVAWY 298 CLGRPWLFA++ A EV II RH ELLA H GE+ RDIRKH WY Sbjct: 255 CLGRPWLFAQIGAQLRGEEIPPEPTLGEVARIIYRHAELLALHDGEEHACRDIRKHTGWY 314 Query: 299 LHGFPAGSDLRRALALVKTLDELDSLLTRLDPDVAFPEAANGPRGRQGSPSRVALPEGWL 358 L GFP G + R+ LA V +L EL +LL + E A RGRQGS S+VALP+GWL Sbjct: 315 LRGFPVGGEFRKDLARVNSLAELSALLDTIADSTERAEHAEDARGRQGSSSKVALPDGWL 374 Query: 359 DDPDDCQVPDGADVMHSGG 377 DDP+D VP+GA++ +GG Sbjct: 375 DDPEDDTVPEGAEMDSNGG 393 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.322 0.138 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 2,693,252,825 Number of extensions: 108011652 Number of successful extensions: 247951 Number of sequences better than 10.0: 3793 Number of HSP's gapped: 238351 Number of HSP's successfully gapped: 4078 Length of query: 377 Length of database: 3,846,993,858 Length adjustment: 139 Effective length of query: 238 Effective length of database: 2,279,740,641 Effective search space: 542578272558 Effective search space used: 542578272558 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 81 (35.8 bits)