BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4858 (707 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HH07|B2HH07_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 1127 0.0 tr|O53834|O53834_MYCTU Tax_Id=1773 SubName: Full=LytR/CpsA/Psr f... 865 0.0 tr|C6DVC7|C6DVC7_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 865 0.0 tr|A5U0L1|A5U0L1_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 865 0.0 tr|A5WKJ1|A5WKJ1_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 865 0.0 tr|A2VGC2|A2VGC2_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 865 0.0 tr|Q7U171|Q7U171_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 861 0.0 tr|C1ALF7|C1ALF7_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 861 0.0 tr|A1KGV5|A1KGV5_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 861 0.0 tr|Q743C9|Q743C9_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 744 0.0 tr|A0QAV4|A0QAV4_MYCA1 Tax_Id=243243 SubName: Full=LytR/CpsA/Psr... 731 0.0 tr|A0R4B6|A0R4B6_MYCS2 Tax_Id=246196 SubName: Full=LytR/CpsA/Psr... 619 e-175 tr|A4T7F3|A4T7F3_MYCGI Tax_Id=350054 SubName: Full=Cell envelope... 617 e-174 tr|A3Q684|A3Q684_MYCSJ Tax_Id=164757 SubName: Full=Cell envelope... 612 e-173 tr|Q1B3B7|Q1B3B7_MYCSS Tax_Id=164756 SubName: Full=Cell envelope... 611 e-173 tr|A1ULT3|A1ULT3_MYCSK Tax_Id=189918 SubName: Full=Cell envelope... 611 e-173 tr|A1TFA8|A1TFA8_MYCVP Tax_Id=350058 SubName: Full=Cell envelope... 609 e-172 tr|B1MI26|B1MI26_MYCA9 Tax_Id=561007 SubName: Full=Putative tran... 551 e-155 tr|Q0S734|Q0S734_RHOSR Tax_Id=101510 SubName: Full=Possible tran... 395 e-107 tr|C1ATD2|C1ATD2_RHOOB Tax_Id=632772 SubName: Full=Putative LytR... 394 e-107 tr|D0L3U3|D0L3U3_GORB4 Tax_Id=526226 SubName: Full=Cell envelope... 381 e-103 tr|C0ZP04|C0ZP04_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR... 368 2e-99 tr|C3JEH1|C3JEH1_RHOER Tax_Id=596309 SubName: Full=LytR/CpsA/Psr... 367 4e-99 tr|Q5Z291|Q5Z291_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 337 4e-90 tr|A4FQC4|A4FQC4_SACEN Tax_Id=405948 SubName: Full=Possible tran... 296 6e-78 tr|C6WPQ9|C6WPQ9_ACTMD Tax_Id=446462 SubName: Full=Cell envelope... 273 5e-71 tr|C7MRB8|C7MRB8_SACVD Tax_Id=471857 SubName: Full=Cell envelope... 258 1e-66 tr|C8XA49|C8XA49_NAKMY Tax_Id=479431 SubName: Full=Cell envelope... 228 2e-57 tr|Q50048|Q50048_MYCLE Tax_Id=1769 SubName: Full=U2266o;[Mycobac... 221 2e-55 tr|C8X6R0|C8X6R0_NAKMY Tax_Id=479431 SubName: Full=Cell envelope... 172 2e-40 tr|Q7WTY1|Q7WTY1_MYCSM Tax_Id=1772 SubName: Full=Putative unchar... 170 7e-40 tr|Q47LW3|Q47LW3_THEFY Tax_Id=269800 SubName: Full=Cell envelope... 159 9e-37 tr|A0LRX6|A0LRX6_ACIC1 Tax_Id=351607 SubName: Full=Cell envelope... 158 2e-36 tr|D1AF80|D1AF80_THECU Tax_Id=471852 SubName: Full=Cell envelope... 150 8e-34 tr|Q47LU7|Q47LU7_THEFY Tax_Id=269800 SubName: Full=Cell envelope... 148 3e-33 tr|C6R4M0|C6R4M0_9MICC Tax_Id=553201 SubName: Full=LytR family r... 146 1e-32 tr|B5HX89|B5HX89_9ACTO Tax_Id=463191 SubName: Full=Transcription... 144 5e-32 tr|C9YZG9|C9YZG9_STRSW Tax_Id=680198 SubName: Full=Putative memb... 142 2e-31 tr|C9N9B2|C9N9B2_9ACTO Tax_Id=591167 SubName: Full=Cell envelope... 142 2e-31 tr|B5GDG4|B5GDG4_9ACTO Tax_Id=465543 SubName: Full=Transcription... 142 2e-31 tr|Q82J68|Q82J68_STRAW Tax_Id=33903 SubName: Full=Putative trans... 139 1e-30 tr|C5C122|C5C122_BEUC1 Tax_Id=471853 SubName: Full=Cell envelope... 139 1e-30 tr|A3TIS3|A3TIS3_9MICO Tax_Id=313589 SubName: Full=Cell envelope... 139 1e-30 tr|A6W3Y3|A6W3Y3_KINRD Tax_Id=266940 SubName: Full=Cell envelope... 138 2e-30 tr|Q82DF2|Q82DF2_STRAW Tax_Id=33903 SubName: Full=Putative trans... 137 4e-30 tr|B5GXX2|B5GXX2_STRCL Tax_Id=443255 SubName: Full=Transcription... 137 4e-30 tr|B5GDG7|B5GDG7_9ACTO Tax_Id=465543 SubName: Full=Transcription... 137 5e-30 tr|D1A4I4|D1A4I4_THECU Tax_Id=471852 SubName: Full=Cell envelope... 137 7e-30 tr|Q9KZK3|Q9KZK3_STRCO Tax_Id=1902 SubName: Full=Putative transc... 135 1e-29 tr|B1VUU3|B1VUU3_STRGG Tax_Id=455632 SubName: Full=Putative tran... 135 1e-29 >tr|B2HH07|B2HH07_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 707 Score = 1127 bits (2914), Expect = 0.0 Identities = 586/707 (82%), Positives = 586/707 (82%) Query: 1 MRGAAPWERFSATPVDDDLVRWSXXXXXXXXXXXXXXXXXXXXKPRQAHYDVERTPKVGS 60 MRGAAPWERFSATPVDDDLVRWS KPRQAHYDVERTPKVGS Sbjct: 1 MRGAAPWERFSATPVDDDLVRWSSTRSADVAQAAAAVDTRGGAKPRQAHYDVERTPKVGS 60 Query: 61 HIDGGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADEQLDTE 120 HIDGGVSVAELIAKLG IADQVHEPADEQLDTE Sbjct: 61 HIDGGVSVAELIAKLGAPVPAHPAHHHSAPESEPLPAPADAAPDIADQVHEPADEQLDTE 120 Query: 121 VIAIPAYSLQLLSELPDLGSANYPHDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPG 180 VIAIPAYSLQLLSELPDLGSANYPHDESDPESPDEQ STAKTPRPG Sbjct: 121 VIAIPAYSLQLLSELPDLGSANYPHDESDPESPDEQPAAPARARRPRLRRRSTAKTPRPG 180 Query: 181 KDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNP 240 KDEPKPRRRPILLAGRS WEWSSSKNNRLNTVSALDPHSGDIVNP Sbjct: 181 KDEPKPRRRPILLAGRSLAALFAVLALVLTGGAWEWSSSKNNRLNTVSALDPHSGDIVNP 240 Query: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD Sbjct: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 Query: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS Sbjct: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 Query: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR Sbjct: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 Query: 421 ARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 ARQVTTESNGDYGRIKRQQ EDTLFNLNKLNNVVDMFIGDSYVDNVKTK Sbjct: 421 ARQVTTESNGDYGRIKRQQLFLSSLLRSLISEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN Sbjct: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 Query: 541 AQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXS 600 AQTLGNR DEVQHQQVTTTSPQEVTVQVSN S Sbjct: 541 AQTLGNRPTTTAPTTAPKAPPASPADEVQHQQVTTTSPQEVTVQVSNGTGTTGLAATAAS 600 Query: 601 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL 660 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL Sbjct: 601 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL 660 Query: 661 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE Sbjct: 661 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 >tr|O53834|O53834_MYCTU Tax_Id=1773 SubName: Full=LytR/CpsA/Psr family protein; SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 684 Score = 865 bits (2235), Expect = 0.0 Identities = 461/707 (65%), Positives = 514/707 (72%), Gaps = 32/707 (4%) Query: 4 AAPWERFSATPVDDDLVRWSXXXXXXXXXXXXXXXXXXXXKPRQAHYDVERTPKVGSHID 63 AAPW R S + D + RW PR T VG H Sbjct: 7 AAPWARLSESAFPDGVDRWITVPPATWVAAQG---------PRD-------TQNVGCHAT 50 Query: 64 GGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADEQLDTEVIA 123 G VSVA+LIA+LG +VH+ AD+Q DTE IA Sbjct: 51 GAVSVADLIARLGPAFPDLPTHRHVAPEPEPSGR--------GPKVHDDADDQQDTEAIA 102 Query: 124 IPAYSLQLLSELPDLGSANYP---HDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPG 180 IPA+SL+ LSELPDL +ANYP H +PE P +Q S P P Sbjct: 103 IPAHSLEFLSELPDLRAANYPRADHARREPELPGKQLTGSARVRPLRIRRTS----PAPA 158 Query: 181 KDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNP 240 K P RRP++LA RS W+WS+SKN+RLN VSALDPHSGDIVNP Sbjct: 159 KPAPNSGRRPMVLAARSLAALFAALALALTGGAWQWSASKNSRLNMVSALDPHSGDIVNP 218 Query: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 SGQ+GDENFL+VGMD+RAGAN+N+GAGD EDAGGARSDTVMLVNIPA+R+RVVAVSFPRD Sbjct: 219 SGQHGDENFLLVGMDSRAGANANIGAGDAEDAGGARSDTVMLVNIPASRERVVAVSFPRD 278 Query: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 LAITP++CEAWNP+TGKYGPIYDE TG MGPR+VYTETKLNS+FSFGGPKCLVKVIQKLS Sbjct: 279 LAITPIQCEAWNPETGKYGPIYDEKTGTMGPRLVYTETKLNSAFSFGGPKCLVKVIQKLS 338 Query: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 GLSINRFIAIDFVGFA+MV+ALGGVEVCSTTPLRDYE+GTVLEHAGRQVIDG TALNYVR Sbjct: 339 GLSINRFIAIDFVGFARMVEALGGVEVCSTTPLRDYELGTVLEHAGRQVIDGPTALNYVR 398 Query: 421 ARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 ARQVTTESNGDYGRIKRQQ DTLFNL++LNNVV+MFIG+SYVDNVKTK Sbjct: 399 ARQVTTESNGDYGRIKRQQLFLSSLLRSMISTDTLFNLSRLNNVVNMFIGNSYVDNVKTK 458 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 DLVELG+SLQ MAAGH+TFVTVPTGITD+NGDEPPRT+DMKALF+AIIDD+PLPLENDHN Sbjct: 459 DLVELGRSLQHMAAGHVTFVTVPTGITDQNGDEPPRTSDMKALFTAIIDDDPLPLENDHN 518 Query: 541 AQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXS 600 AQ LGN +E+QHQQVTTTSP+EVTVQVSN Sbjct: 519 AQRLGN-TPSTPPTTTKKAPQAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATD 577 Query: 601 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL 660 QL+RNGFNVMAPDDYP+SL TTV F+PGNEQAAATVAA FG SK+ERVTGIG++VQVVL Sbjct: 578 QLKRNGFNVMAPDDYPSSLLATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVL 637 Query: 661 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G DF AV AP PSGS+VSVQISRNS+SPP KLPEDLTVTNAADTTCE Sbjct: 638 GQDFSAVRAPLPSGSTVSVQISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|C6DVC7|C6DVC7_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 684 Score = 865 bits (2235), Expect = 0.0 Identities = 461/707 (65%), Positives = 514/707 (72%), Gaps = 32/707 (4%) Query: 4 AAPWERFSATPVDDDLVRWSXXXXXXXXXXXXXXXXXXXXKPRQAHYDVERTPKVGSHID 63 AAPW R S + D + RW PR T VG H Sbjct: 7 AAPWARLSESAFPDGVDRWITVPPATWVAAQG---------PRD-------TQNVGCHAT 50 Query: 64 GGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADEQLDTEVIA 123 G VSVA+LIA+LG +VH+ AD+Q DTE IA Sbjct: 51 GAVSVADLIARLGPAFPDLPTHRHVAPEPEPSGR--------GPKVHDDADDQQDTEAIA 102 Query: 124 IPAYSLQLLSELPDLGSANYP---HDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPG 180 IPA+SL+ LSELPDL +ANYP H +PE P +Q S P P Sbjct: 103 IPAHSLEFLSELPDLRAANYPRADHARREPELPGKQLTGSARVRPLRIRRTS----PAPA 158 Query: 181 KDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNP 240 K P RRP++LA RS W+WS+SKN+RLN VSALDPHSGDIVNP Sbjct: 159 KPAPNSGRRPMVLAARSLAALFAALALALTGGAWQWSASKNSRLNMVSALDPHSGDIVNP 218 Query: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 SGQ+GDENFL+VGMD+RAGAN+N+GAGD EDAGGARSDTVMLVNIPA+R+RVVAVSFPRD Sbjct: 219 SGQHGDENFLLVGMDSRAGANANIGAGDAEDAGGARSDTVMLVNIPASRERVVAVSFPRD 278 Query: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 LAITP++CEAWNP+TGKYGPIYDE TG MGPR+VYTETKLNS+FSFGGPKCLVKVIQKLS Sbjct: 279 LAITPIQCEAWNPETGKYGPIYDEKTGTMGPRLVYTETKLNSAFSFGGPKCLVKVIQKLS 338 Query: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 GLSINRFIAIDFVGFA+MV+ALGGVEVCSTTPLRDYE+GTVLEHAGRQVIDG TALNYVR Sbjct: 339 GLSINRFIAIDFVGFARMVEALGGVEVCSTTPLRDYELGTVLEHAGRQVIDGPTALNYVR 398 Query: 421 ARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 ARQVTTESNGDYGRIKRQQ DTLFNL++LNNVV+MFIG+SYVDNVKTK Sbjct: 399 ARQVTTESNGDYGRIKRQQLFLSSLLRSMISTDTLFNLSRLNNVVNMFIGNSYVDNVKTK 458 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 DLVELG+SLQ MAAGH+TFVTVPTGITD+NGDEPPRT+DMKALF+AIIDD+PLPLENDHN Sbjct: 459 DLVELGRSLQHMAAGHVTFVTVPTGITDQNGDEPPRTSDMKALFTAIIDDDPLPLENDHN 518 Query: 541 AQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXS 600 AQ LGN +E+QHQQVTTTSP+EVTVQVSN Sbjct: 519 AQRLGN-TPSTPPTTTKKAPQAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATD 577 Query: 601 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL 660 QL+RNGFNVMAPDDYP+SL TTV F+PGNEQAAATVAA FG SK+ERVTGIG++VQVVL Sbjct: 578 QLKRNGFNVMAPDDYPSSLLATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVL 637 Query: 661 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G DF AV AP PSGS+VSVQISRNS+SPP KLPEDLTVTNAADTTCE Sbjct: 638 GQDFSAVRAPLPSGSTVSVQISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|A5U0L1|A5U0L1_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 684 Score = 865 bits (2235), Expect = 0.0 Identities = 461/707 (65%), Positives = 514/707 (72%), Gaps = 32/707 (4%) Query: 4 AAPWERFSATPVDDDLVRWSXXXXXXXXXXXXXXXXXXXXKPRQAHYDVERTPKVGSHID 63 AAPW R S + D + RW PR T VG H Sbjct: 7 AAPWARLSESAFPDGVDRWITVPPATWVAAQG---------PRD-------TQNVGCHAT 50 Query: 64 GGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADEQLDTEVIA 123 G VSVA+LIA+LG +VH+ AD+Q DTE IA Sbjct: 51 GAVSVADLIARLGPAFPDLPTHRHVAPEPEPSGR--------GPKVHDDADDQQDTEAIA 102 Query: 124 IPAYSLQLLSELPDLGSANYP---HDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPG 180 IPA+SL+ LSELPDL +ANYP H +PE P +Q S P P Sbjct: 103 IPAHSLEFLSELPDLRAANYPRADHARREPELPGKQLTGSARVRPLRIRRTS----PAPA 158 Query: 181 KDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNP 240 K P RRP++LA RS W+WS+SKN+RLN VSALDPHSGDIVNP Sbjct: 159 KPAPNSGRRPMVLAARSLAALFAALALALTGGAWQWSASKNSRLNMVSALDPHSGDIVNP 218 Query: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 SGQ+GDENFL+VGMD+RAGAN+N+GAGD EDAGGARSDTVMLVNIPA+R+RVVAVSFPRD Sbjct: 219 SGQHGDENFLLVGMDSRAGANANIGAGDAEDAGGARSDTVMLVNIPASRERVVAVSFPRD 278 Query: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 LAITP++CEAWNP+TGKYGPIYDE TG MGPR+VYTETKLNS+FSFGGPKCLVKVIQKLS Sbjct: 279 LAITPIQCEAWNPETGKYGPIYDEKTGTMGPRLVYTETKLNSAFSFGGPKCLVKVIQKLS 338 Query: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 GLSINRFIAIDFVGFA+MV+ALGGVEVCSTTPLRDYE+GTVLEHAGRQVIDG TALNYVR Sbjct: 339 GLSINRFIAIDFVGFARMVEALGGVEVCSTTPLRDYELGTVLEHAGRQVIDGPTALNYVR 398 Query: 421 ARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 ARQVTTESNGDYGRIKRQQ DTLFNL++LNNVV+MFIG+SYVDNVKTK Sbjct: 399 ARQVTTESNGDYGRIKRQQLFLSSLLRSMISTDTLFNLSRLNNVVNMFIGNSYVDNVKTK 458 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 DLVELG+SLQ MAAGH+TFVTVPTGITD+NGDEPPRT+DMKALF+AIIDD+PLPLENDHN Sbjct: 459 DLVELGRSLQHMAAGHVTFVTVPTGITDQNGDEPPRTSDMKALFTAIIDDDPLPLENDHN 518 Query: 541 AQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXS 600 AQ LGN +E+QHQQVTTTSP+EVTVQVSN Sbjct: 519 AQRLGN-TPSTPPTTTKKAPQAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATD 577 Query: 601 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL 660 QL+RNGFNVMAPDDYP+SL TTV F+PGNEQAAATVAA FG SK+ERVTGIG++VQVVL Sbjct: 578 QLKRNGFNVMAPDDYPSSLLATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVL 637 Query: 661 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G DF AV AP PSGS+VSVQISRNS+SPP KLPEDLTVTNAADTTCE Sbjct: 638 GQDFSAVRAPLPSGSTVSVQISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|A5WKJ1|A5WKJ1_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 684 Score = 865 bits (2235), Expect = 0.0 Identities = 461/707 (65%), Positives = 514/707 (72%), Gaps = 32/707 (4%) Query: 4 AAPWERFSATPVDDDLVRWSXXXXXXXXXXXXXXXXXXXXKPRQAHYDVERTPKVGSHID 63 AAPW R S + D + RW PR T VG H Sbjct: 7 AAPWARLSESAFPDGVDRWITVPPATWVAAQG---------PRD-------TQNVGCHAT 50 Query: 64 GGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADEQLDTEVIA 123 G VSVA+LIA+LG +VH+ AD+Q DTE IA Sbjct: 51 GAVSVADLIARLGPAFPDLPTHRHVAPEPEPSGR--------GPKVHDDADDQQDTEAIA 102 Query: 124 IPAYSLQLLSELPDLGSANYP---HDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPG 180 IPA+SL+ LSELPDL +ANYP H +PE P +Q S P P Sbjct: 103 IPAHSLEFLSELPDLRAANYPRADHARREPELPGKQLTGSARVRPLRIRRTS----PAPA 158 Query: 181 KDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNP 240 K P RRP++LA RS W+WS+SKN+RLN VSALDPHSGDIVNP Sbjct: 159 KPAPNSGRRPMVLAARSLAALFAALALALTGGAWQWSASKNSRLNMVSALDPHSGDIVNP 218 Query: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 SGQ+GDENFL+VGMD+RAGAN+N+GAGD EDAGGARSDTVMLVNIPA+R+RVVAVSFPRD Sbjct: 219 SGQHGDENFLLVGMDSRAGANANIGAGDAEDAGGARSDTVMLVNIPASRERVVAVSFPRD 278 Query: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 LAITP++CEAWNP+TGKYGPIYDE TG MGPR+VYTETKLNS+FSFGGPKCLVKVIQKLS Sbjct: 279 LAITPIQCEAWNPETGKYGPIYDEKTGTMGPRLVYTETKLNSAFSFGGPKCLVKVIQKLS 338 Query: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 GLSINRFIAIDFVGFA+MV+ALGGVEVCSTTPLRDYE+GTVLEHAGRQVIDG TALNYVR Sbjct: 339 GLSINRFIAIDFVGFARMVEALGGVEVCSTTPLRDYELGTVLEHAGRQVIDGPTALNYVR 398 Query: 421 ARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 ARQVTTESNGDYGRIKRQQ DTLFNL++LNNVV+MFIG+SYVDNVKTK Sbjct: 399 ARQVTTESNGDYGRIKRQQLFLSSLLRSMISTDTLFNLSRLNNVVNMFIGNSYVDNVKTK 458 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 DLVELG+SLQ MAAGH+TFVTVPTGITD+NGDEPPRT+DMKALF+AIIDD+PLPLENDHN Sbjct: 459 DLVELGRSLQHMAAGHVTFVTVPTGITDQNGDEPPRTSDMKALFTAIIDDDPLPLENDHN 518 Query: 541 AQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXS 600 AQ LGN +E+QHQQVTTTSP+EVTVQVSN Sbjct: 519 AQRLGN-TPSTPPTTTKKAPQAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATD 577 Query: 601 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL 660 QL+RNGFNVMAPDDYP+SL TTV F+PGNEQAAATVAA FG SK+ERVTGIG++VQVVL Sbjct: 578 QLKRNGFNVMAPDDYPSSLLATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVL 637 Query: 661 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G DF AV AP PSGS+VSVQISRNS+SPP KLPEDLTVTNAADTTCE Sbjct: 638 GQDFSAVRAPLPSGSTVSVQISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|A2VGC2|A2VGC2_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 684 Score = 865 bits (2235), Expect = 0.0 Identities = 461/707 (65%), Positives = 514/707 (72%), Gaps = 32/707 (4%) Query: 4 AAPWERFSATPVDDDLVRWSXXXXXXXXXXXXXXXXXXXXKPRQAHYDVERTPKVGSHID 63 AAPW R S + D + RW PR T VG H Sbjct: 7 AAPWARLSESAFPDGVDRWITVPPATWVAAQG---------PRD-------TQNVGCHAT 50 Query: 64 GGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADEQLDTEVIA 123 G VSVA+LIA+LG +VH+ AD+Q DTE IA Sbjct: 51 GAVSVADLIARLGPAFPDLPTHRHVAPEPEPSGR--------GPKVHDDADDQQDTEAIA 102 Query: 124 IPAYSLQLLSELPDLGSANYP---HDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPG 180 IPA+SL+ LSELPDL +ANYP H +PE P +Q S P P Sbjct: 103 IPAHSLEFLSELPDLRAANYPRADHARREPELPGKQLTGSARVRPLRIRRTS----PAPA 158 Query: 181 KDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNP 240 K P RRP++LA RS W+WS+SKN+RLN VSALDPHSGDIVNP Sbjct: 159 KPAPNSGRRPMVLAARSLAALFAALALALTGGAWQWSASKNSRLNMVSALDPHSGDIVNP 218 Query: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 SGQ+GDENFL+VGMD+RAGAN+N+GAGD EDAGGARSDTVMLVNIPA+R+RVVAVSFPRD Sbjct: 219 SGQHGDENFLLVGMDSRAGANANIGAGDAEDAGGARSDTVMLVNIPASRERVVAVSFPRD 278 Query: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 LAITP++CEAWNP+TGKYGPIYDE TG MGPR+VYTETKLNS+FSFGGPKCLVKVIQKLS Sbjct: 279 LAITPIQCEAWNPETGKYGPIYDEKTGTMGPRLVYTETKLNSAFSFGGPKCLVKVIQKLS 338 Query: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 GLSINRFIAIDFVGFA+MV+ALGGVEVCSTTPLRDYE+GTVLEHAGRQVIDG TALNYVR Sbjct: 339 GLSINRFIAIDFVGFARMVEALGGVEVCSTTPLRDYELGTVLEHAGRQVIDGPTALNYVR 398 Query: 421 ARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 ARQVTTESNGDYGRIKRQQ DTLFNL++LNNVV+MFIG+SYVDNVKTK Sbjct: 399 ARQVTTESNGDYGRIKRQQLFLSSLLRSMISTDTLFNLSRLNNVVNMFIGNSYVDNVKTK 458 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 DLVELG+SLQ MAAGH+TFVTVPTGITD+NGDEPPRT+DMKALF+AIIDD+PLPLENDHN Sbjct: 459 DLVELGRSLQHMAAGHVTFVTVPTGITDQNGDEPPRTSDMKALFTAIIDDDPLPLENDHN 518 Query: 541 AQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXS 600 AQ LGN +E+QHQQVTTTSP+EVTVQVSN Sbjct: 519 AQRLGN-TPSTPPTTTKKAPQAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATD 577 Query: 601 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL 660 QL+RNGFNVMAPDDYP+SL TTV F+PGNEQAAATVAA FG SK+ERVTGIG++VQVVL Sbjct: 578 QLKRNGFNVMAPDDYPSSLLATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVL 637 Query: 661 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G DF AV AP PSGS+VSVQISRNS+SPP KLPEDLTVTNAADTTCE Sbjct: 638 GQDFSAVRAPLPSGSTVSVQISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|Q7U171|Q7U171_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb0845c;[Mycobacterium bovis] Length = 684 Score = 861 bits (2225), Expect = 0.0 Identities = 460/707 (65%), Positives = 513/707 (72%), Gaps = 32/707 (4%) Query: 4 AAPWERFSATPVDDDLVRWSXXXXXXXXXXXXXXXXXXXXKPRQAHYDVERTPKVGSHID 63 AAPW R S + D + RW PR T VG H Sbjct: 7 AAPWARLSESAFPDGVDRWITVPPATWVAAQG---------PRD-------TQNVGCHAT 50 Query: 64 GGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADEQLDTEVIA 123 G VSVA+LIA+LG +V + AD+Q DTE IA Sbjct: 51 GAVSVADLIARLGPAFPDLPTHRHVAPEPEPSGR--------GPKVPDDADDQQDTEAIA 102 Query: 124 IPAYSLQLLSELPDLGSANYP---HDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPG 180 IPA+SL+ LSELPDL +ANYP H +PE P +Q S P P Sbjct: 103 IPAHSLEFLSELPDLRAANYPRADHARREPELPGKQLTGSARVRPLRIRRTS----PAPA 158 Query: 181 KDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNP 240 K P RRP++LA RS W+WS+SKN+RLN VSALDPHSGDIVNP Sbjct: 159 KPAPNSGRRPMVLAARSLAALFAALALALTGGAWQWSASKNSRLNMVSALDPHSGDIVNP 218 Query: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 SGQ+GDENFL+VGMD+RAGAN+N+GAGD EDAGGARSDTVMLVNIPA+R+RVVAVSFPRD Sbjct: 219 SGQHGDENFLLVGMDSRAGANANIGAGDAEDAGGARSDTVMLVNIPASRERVVAVSFPRD 278 Query: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 LAITP++CEAWNP+TGKYGPIYDE TG MGPR+VYTETKLNS+FSFGGPKCLVKVIQKLS Sbjct: 279 LAITPIQCEAWNPETGKYGPIYDEKTGTMGPRLVYTETKLNSAFSFGGPKCLVKVIQKLS 338 Query: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 GLSINRFIAIDFVGFA+MV+ALGGVEVCSTTPLRDYE+GTVLEHAGRQVIDG TALNYVR Sbjct: 339 GLSINRFIAIDFVGFARMVEALGGVEVCSTTPLRDYELGTVLEHAGRQVIDGPTALNYVR 398 Query: 421 ARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 ARQVTTESNGDYGRIKRQQ DTLFNL++LNNVV+MFIG+SYVDNVKTK Sbjct: 399 ARQVTTESNGDYGRIKRQQLFLSSLLRSMISTDTLFNLSRLNNVVNMFIGNSYVDNVKTK 458 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 DLVELG+SLQ MAAGH+TFVTVPTGITD+NGDEPPRT+DMKALF+AIIDD+PLPLENDHN Sbjct: 459 DLVELGRSLQHMAAGHVTFVTVPTGITDQNGDEPPRTSDMKALFTAIIDDDPLPLENDHN 518 Query: 541 AQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXS 600 AQ LGN +E+QHQQVTTTSP+EVTVQVSN Sbjct: 519 AQRLGN-TPSTPPTTTKKAPQAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATD 577 Query: 601 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL 660 QL+RNGFNVMAPDDYP+SL TTV F+PGNEQAAATVAA FG SK+ERVTGIG++VQVVL Sbjct: 578 QLKRNGFNVMAPDDYPSSLLATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVL 637 Query: 661 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G DF AV AP PSGS+VSVQISRNS+SPP KLPEDLTVTNAADTTCE Sbjct: 638 GQDFSAVRAPLPSGSTVSVQISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|C1ALF7|C1ALF7_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 684 Score = 861 bits (2225), Expect = 0.0 Identities = 460/707 (65%), Positives = 513/707 (72%), Gaps = 32/707 (4%) Query: 4 AAPWERFSATPVDDDLVRWSXXXXXXXXXXXXXXXXXXXXKPRQAHYDVERTPKVGSHID 63 AAPW R S + D + RW PR T VG H Sbjct: 7 AAPWARLSESAFPDGVDRWITVPPATWVAAQG---------PRD-------TQNVGCHAT 50 Query: 64 GGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADEQLDTEVIA 123 G VSVA+LIA+LG +V + AD+Q DTE IA Sbjct: 51 GAVSVADLIARLGPAFPDLPTHRHVAPEPEPSGR--------GPKVPDDADDQQDTEAIA 102 Query: 124 IPAYSLQLLSELPDLGSANYP---HDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPG 180 IPA+SL+ LSELPDL +ANYP H +PE P +Q S P P Sbjct: 103 IPAHSLEFLSELPDLRAANYPRADHARREPELPGKQLTGSARVRPLRIRRTS----PAPA 158 Query: 181 KDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNP 240 K P RRP++LA RS W+WS+SKN+RLN VSALDPHSGDIVNP Sbjct: 159 KPAPNSGRRPMVLAARSLAALFAALALALTGGAWQWSASKNSRLNMVSALDPHSGDIVNP 218 Query: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 SGQ+GDENFL+VGMD+RAGAN+N+GAGD EDAGGARSDTVMLVNIPA+R+RVVAVSFPRD Sbjct: 219 SGQHGDENFLLVGMDSRAGANANIGAGDAEDAGGARSDTVMLVNIPASRERVVAVSFPRD 278 Query: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 LAITP++CEAWNP+TGKYGPIYDE TG MGPR+VYTETKLNS+FSFGGPKCLVKVIQKLS Sbjct: 279 LAITPIQCEAWNPETGKYGPIYDEKTGTMGPRLVYTETKLNSAFSFGGPKCLVKVIQKLS 338 Query: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 GLSINRFIAIDFVGFA+MV+ALGGVEVCSTTPLRDYE+GTVLEHAGRQVIDG TALNYVR Sbjct: 339 GLSINRFIAIDFVGFARMVEALGGVEVCSTTPLRDYELGTVLEHAGRQVIDGPTALNYVR 398 Query: 421 ARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 ARQVTTESNGDYGRIKRQQ DTLFNL++LNNVV+MFIG+SYVDNVKTK Sbjct: 399 ARQVTTESNGDYGRIKRQQLFLSSLLRSMISTDTLFNLSRLNNVVNMFIGNSYVDNVKTK 458 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 DLVELG+SLQ MAAGH+TFVTVPTGITD+NGDEPPRT+DMKALF+AIIDD+PLPLENDHN Sbjct: 459 DLVELGRSLQHMAAGHVTFVTVPTGITDQNGDEPPRTSDMKALFTAIIDDDPLPLENDHN 518 Query: 541 AQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXS 600 AQ LGN +E+QHQQVTTTSP+EVTVQVSN Sbjct: 519 AQRLGN-TPSTPPTTTKKAPQAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATD 577 Query: 601 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL 660 QL+RNGFNVMAPDDYP+SL TTV F+PGNEQAAATVAA FG SK+ERVTGIG++VQVVL Sbjct: 578 QLKRNGFNVMAPDDYPSSLLATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVL 637 Query: 661 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G DF AV AP PSGS+VSVQISRNS+SPP KLPEDLTVTNAADTTCE Sbjct: 638 GQDFSAVRAPLPSGSTVSVQISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|A1KGV5|A1KGV5_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_0875c;[Mycobacterium bovis] Length = 684 Score = 861 bits (2225), Expect = 0.0 Identities = 460/707 (65%), Positives = 513/707 (72%), Gaps = 32/707 (4%) Query: 4 AAPWERFSATPVDDDLVRWSXXXXXXXXXXXXXXXXXXXXKPRQAHYDVERTPKVGSHID 63 AAPW R S + D + RW PR T VG H Sbjct: 7 AAPWARLSESAFPDGVDRWITVPPATWVAAQG---------PRD-------TQNVGCHAT 50 Query: 64 GGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADEQLDTEVIA 123 G VSVA+LIA+LG +V + AD+Q DTE IA Sbjct: 51 GAVSVADLIARLGPAFPDLPTHRHVAPEPEPSGR--------GPKVPDDADDQQDTEAIA 102 Query: 124 IPAYSLQLLSELPDLGSANYP---HDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPG 180 IPA+SL+ LSELPDL +ANYP H +PE P +Q S P P Sbjct: 103 IPAHSLEFLSELPDLRAANYPRADHARREPELPGKQLTGSARVRPLRIRRTS----PAPA 158 Query: 181 KDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNP 240 K P RRP++LA RS W+WS+SKN+RLN VSALDPHSGDIVNP Sbjct: 159 KPAPNSGRRPMVLAARSLAALFAALALALTGGAWQWSASKNSRLNMVSALDPHSGDIVNP 218 Query: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 SGQ+GDENFL+VGMD+RAGAN+N+GAGD EDAGGARSDTVMLVNIPA+R+RVVAVSFPRD Sbjct: 219 SGQHGDENFLLVGMDSRAGANANIGAGDAEDAGGARSDTVMLVNIPASRERVVAVSFPRD 278 Query: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 LAITP++CEAWNP+TGKYGPIYDE TG MGPR+VYTETKLNS+FSFGGPKCLVKVIQKLS Sbjct: 279 LAITPIQCEAWNPETGKYGPIYDEKTGTMGPRLVYTETKLNSAFSFGGPKCLVKVIQKLS 338 Query: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 GLSINRFIAIDFVGFA+MV+ALGGVEVCSTTPLRDYE+GTVLEHAGRQVIDG TALNYVR Sbjct: 339 GLSINRFIAIDFVGFARMVEALGGVEVCSTTPLRDYELGTVLEHAGRQVIDGPTALNYVR 398 Query: 421 ARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 ARQVTTESNGDYGRIKRQQ DTLFNL++LNNVV+MFIG+SYVDNVKTK Sbjct: 399 ARQVTTESNGDYGRIKRQQLFLSSLLRSMISTDTLFNLSRLNNVVNMFIGNSYVDNVKTK 458 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 DLVELG+SLQ MAAGH+TFVTVPTGITD+NGDEPPRT+DMKALF+AIIDD+PLPLENDHN Sbjct: 459 DLVELGRSLQHMAAGHVTFVTVPTGITDQNGDEPPRTSDMKALFTAIIDDDPLPLENDHN 518 Query: 541 AQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXS 600 AQ LGN +E+QHQQVTTTSP+EVTVQVSN Sbjct: 519 AQRLGN-TPSTPPTTTKKAPQAGLTNEIQHQQVTTTSPKEVTVQVSNSTGQAGLATTATD 577 Query: 601 QLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVL 660 QL+RNGFNVMAPDDYP+SL TTV F+PGNEQAAATVAA FG SK+ERVTGIG++VQVVL Sbjct: 578 QLKRNGFNVMAPDDYPSSLLATTVFFSPGNEQAAATVAAVFGQSKIERVTGIGQLVQVVL 637 Query: 661 GADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G DF AV AP PSGS+VSVQISRNS+SPP KLPEDLTVTNAADTTCE Sbjct: 638 GQDFSAVRAPLPSGSTVSVQISRNSSSPPTKLPEDLTVTNAADTTCE 684 >tr|Q743C9|Q743C9_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 674 Score = 744 bits (1920), Expect = 0.0 Identities = 408/710 (57%), Positives = 483/710 (68%), Gaps = 44/710 (6%) Query: 4 AAPWERFSATPVDDDLVRWSXXXXXXXXXXXXXXXXXXXXKPRQAHYDVERTPKVGSHID 63 AAPWERF P DD L RW +P A D + G H Sbjct: 3 AAPWERFFEPPPDDRLHRWRPDAAAL--------------EPVAAPEDDDEPG--GCHTG 46 Query: 64 GGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPAD----EQLDT 119 GGV+VA+LIAK+G + + PA E T Sbjct: 47 GGVTVADLIAKVGAPNRPVHRRAAPEETEPIEPEPVEPEP-VGSEPPGPASGLPLELQQT 105 Query: 120 EVIAIPAYSLQLLSELPDLGSANYPHD-ESDPESPDEQXXXXXXXXXXXXXXXSTAKTPR 178 +VI AYS+ +SEL +L + +YP+D +SD +S D A T Sbjct: 106 QVIDDLAYSVDAVSELRELMATDYPNDGDSDQQSAD------------------AADT-- 145 Query: 179 PGKDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIV 238 EP+ RRRP+L+AGRS W+WS+SKN RLNT++ALD +S DI Sbjct: 146 -AAGEPRRRRRPMLMAGRSVAALAAVLALATTGGAWQWSASKNARLNTINALDRNSSDIR 204 Query: 239 NPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFP 298 +P GQYGDE+FLIVG+D+RAG N+N+GAG T+DA GARSDTVMLVNIPANRKRVVAVSFP Sbjct: 205 DPGGQYGDEDFLIVGLDSRAGDNANMGAGSTDDADGARSDTVMLVNIPANRKRVVAVSFP 264 Query: 299 RDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQK 358 RDLAITP++CEAW+P TGKYGPIYD T GP+MVYTETKLNS+F+FGGPKCLVK IQK Sbjct: 265 RDLAITPMQCEAWDPSTGKYGPIYDPKTKSWGPKMVYTETKLNSAFAFGGPKCLVKEIQK 324 Query: 359 LSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNY 418 LSGLSIN FIA+DF GFAKMV ALGGVEVCS+TPL DYE+GTVLEH GRQV+DG TALNY Sbjct: 325 LSGLSINHFIAVDFAGFAKMVDALGGVEVCSSTPLHDYELGTVLEHGGRQVLDGDTALNY 384 Query: 419 VRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVK 478 VRARQVTTE NGDYGRIKRQQ DTL +LNKLNNVV++ I D+ VDNVK Sbjct: 385 VRARQVTTEVNGDYGRIKRQQLFLSSLLRSLISADTLLDLNKLNNVVNLVINDTVVDNVK 444 Query: 479 TKDLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLEND 538 +KDLV+LGQSLQGMAAGH+TFVTVPTG+TD+NGDEPPR +DM+ALF AII+D+PLP END Sbjct: 445 SKDLVQLGQSLQGMAAGHVTFVTVPTGVTDQNGDEPPRMSDMRALFDAIINDDPLPEEND 504 Query: 539 HNAQTL-GNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXX 597 NAQ L + E Q +QVTTTSP VTV+VSN Sbjct: 505 QNAQNLSASGSTTGAPKAPTTRKSPTPTPEPQREQVTTTSPSGVTVRVSNATTQSGLAAT 564 Query: 598 XXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQ 657 SQL+R+GFNVM PDDYP+S+ TTTVLF+PGNE+AAATVA++F N+KV+RV+G G+VVQ Sbjct: 565 ATSQLKRDGFNVMTPDDYPSSVNTTTVLFSPGNEEAAATVASSFANAKVQRVSGYGQVVQ 624 Query: 658 VVLGADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 VVLG DFK+VTAP PSGS++S+QI R S++ P KLPEDLTVTNAADTTCE Sbjct: 625 VVLGPDFKSVTAPSPSGSTMSLQIERGSSNAPAKLPEDLTVTNAADTTCE 674 >tr|A0QAV4|A0QAV4_MYCA1 Tax_Id=243243 SubName: Full=LytR/CpsA/Psr family protein;[Mycobacterium avium] Length = 662 Score = 731 bits (1888), Expect = 0.0 Identities = 390/655 (59%), Positives = 463/655 (70%), Gaps = 32/655 (4%) Query: 59 GSHIDGGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPAD---- 114 G H GGV+VA+LIAK+G + + PA Sbjct: 34 GCHTGGGVTVADLIAKVGAPNRPVHRRAAPEETEPFEPEPVEPEP-VGSEPPGPASGLPL 92 Query: 115 EQLDTEVIAIPAYSLQLLSELPDLGSANYPHD-ESDPESPDEQXXXXXXXXXXXXXXXST 173 E T+VI AYS+ +SEL +L + +YP+D +SD +S D Sbjct: 93 ELQQTQVIDDLAYSVDAVSELRELMATDYPNDGDSDQQSAD------------------- 133 Query: 174 AKTPRPGKDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPH 233 EP+ RRRP+L+AGRS W+WS+SKN RLNT++ALD + Sbjct: 134 ------AAGEPRRRRRPMLMAGRSVAALAAVLALATTGGAWQWSASKNARLNTINALDRN 187 Query: 234 SGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVV 293 S DI +P GQYGDE+FLIVG+D+RAG N+N+GAG T+DA GARSDTVMLVNIPANRKRVV Sbjct: 188 SSDIRDPGGQYGDEDFLIVGLDSRAGDNANMGAGSTDDADGARSDTVMLVNIPANRKRVV 247 Query: 294 AVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLV 353 AVSFPRDLAITP++CEAW+P TGKYGPIYD T GP+MVYTETKLNS+F+FGGPKCLV Sbjct: 248 AVSFPRDLAITPMQCEAWDPSTGKYGPIYDPKTKSWGPKMVYTETKLNSAFAFGGPKCLV 307 Query: 354 KVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGT 413 K IQKLSGLSIN FIA+DF GFAKMV ALGGVEVCS+TPL DYE+GTVLEH GRQV+DG Sbjct: 308 KEIQKLSGLSINHFIAVDFAGFAKMVDALGGVEVCSSTPLHDYELGTVLEHGGRQVLDGD 367 Query: 414 TALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSY 473 TALNYVRARQVTTE NGDYGRIKRQQ DTL +LNKLNNVV++ I D+ Sbjct: 368 TALNYVRARQVTTEVNGDYGRIKRQQLFLSSLLRSLISADTLLDLNKLNNVVNLVINDTV 427 Query: 474 VDNVKTKDLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPL 533 VDNVK+KDLV+LGQSLQGMAAGH+TFVTVPTG+TD+NGDEPPR +DM+ALF AII+D+PL Sbjct: 428 VDNVKSKDLVQLGQSLQGMAAGHVTFVTVPTGVTDQNGDEPPRMSDMRALFDAIINDDPL 487 Query: 534 PLENDHNAQTL-GNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXX 592 P END NAQ L + E Q +QVTTTSP VTV+VSN Sbjct: 488 PEENDQNAQNLSASGSTTGAPKAPTTRKSPTPTPEPQREQVTTTSPSGVTVRVSNATTQS 547 Query: 593 XXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGI 652 SQL+R+GFNVM PDDYP+S+ TTTVLF+PGNE+AAATVA++F N+KV+RV+G Sbjct: 548 GLAATATSQLKRDGFNVMTPDDYPSSVNTTTVLFSPGNEEAAATVASSFANAKVQRVSGY 607 Query: 653 GEVVQVVLGADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G+VVQVVLG DFK+VTAP PSGS++S+QI R S++ P KLPEDLTVTNAADTTCE Sbjct: 608 GQVVQVVLGPDFKSVTAPSPSGSTMSLQIERGSSNAPAKLPEDLTVTNAADTTCE 662 >tr|A0R4B6|A0R4B6_MYCS2 Tax_Id=246196 SubName: Full=LytR/CpsA/Psr family protein;[Mycobacterium smegmatis] Length = 722 Score = 619 bits (1595), Expect = e-175 Identities = 318/538 (59%), Positives = 387/538 (71%), Gaps = 12/538 (2%) Query: 182 DEPKPRR--RPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVN 239 DEP R R ++ GR+ W+W SSKN+ LN V+ALD S DI++ Sbjct: 185 DEPHRRHPNRKAMIVGRAAAAMIAALTLVLTGGAWQWQSSKNDSLNKVAALDLGSRDILD 244 Query: 240 PSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPR 299 P+ Q+GDENFLIVGMD+R G NS +GAG T+DA GARSDT+MLVNIPA+R+RVVAVSFPR Sbjct: 245 PNAQFGDENFLIVGMDSRFGENSQMGAGSTDDADGARSDTIMLVNIPASRERVVAVSFPR 304 Query: 300 DLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKL 359 DLAITP+KCE W+P+TG YGPI+DE +G GP VYTETKLNS+F+FGGPKCLVKVIQK+ Sbjct: 305 DLAITPMKCEPWDPETGTYGPIWDEASGTYGPDEVYTETKLNSAFAFGGPKCLVKVIQKI 364 Query: 360 SGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYV 419 SGLS+NRF+A+DF GF+KMV ALGGVEVCSTTPL DYE+GTVL +AGRQ++DG TALNYV Sbjct: 365 SGLSVNRFMAVDFAGFSKMVDALGGVEVCSTTPLEDYELGTVLANAGRQIVDGHTALNYV 424 Query: 420 RARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKT 479 RARQVTTE NGDYGRIKRQQ +DT F+L+KLNNVV+MFI DSYVDN+KT Sbjct: 425 RARQVTTEYNGDYGRIKRQQLFLSSLLRSLISKDTFFSLSKLNNVVNMFIADSYVDNIKT 484 Query: 480 KDLVELGQSLQGMAAGHITFVTVPT-GITDENGDEPPRTADMKALFSAIIDDEPLPLE-N 537 KDLV+LGQS+QG+ AG ITFVT+PT G DE G+E PR D++ALF AII+D+PLP E N Sbjct: 485 KDLVDLGQSVQGVNAGRITFVTIPTTGYADEWGNEQPRMDDVRALFDAIINDDPLPGEKN 544 Query: 538 DHNAQTLGN--------RXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXX 589 N G + + TT PQ+VTV+VSN Sbjct: 545 PDNTPVPGTPESTTNTAQAPQSTSPAPQPAHAAPAPGSAEMVDTVTTEPQQVTVKVSNST 604 Query: 590 XXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERV 649 +LE++GFNV PDDYP L TTV F+PGNE+AAATVA++F N+ +ERV Sbjct: 605 GQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPGNEEAAATVASSFSNAAIERV 664 Query: 650 TGIGEVVQVVLGADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G+G+VVQVVLG DF AV P PSGS++ V++ R ++S P +LPEDL+VTNAAD TCE Sbjct: 665 AGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTPTQLPEDLSVTNAADATCE 722 >tr|A4T7F3|A4T7F3_MYCGI Tax_Id=350054 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium gilvum] Length = 649 Score = 617 bits (1591), Expect = e-174 Identities = 320/537 (59%), Positives = 389/537 (72%), Gaps = 6/537 (1%) Query: 175 KTPRPGKD---EPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALD 231 + PRP + +P R ++AGR W+W S+KNN LN VSALD Sbjct: 115 EAPRPPQHVVAKPVRSHRRTVMAGRVAAALVAVLALVLTGGAWQWQSAKNNLLNRVSALD 174 Query: 232 PHSGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKR 291 P S DIV+P+ Q+GDENFLIVG D+R G+N+ +GAG TEDA GARSDTVMLVNIPANR+R Sbjct: 175 PDSRDIVDPNAQFGDENFLIVGTDSRLGSNAEIGAGTTEDAAGARSDTVMLVNIPANRER 234 Query: 292 VVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKC 351 VVAVSFPRDL I P+KCE W+P+T +YGPI D + G VYTE KLNS+F+ GGPKC Sbjct: 235 VVAVSFPRDLEIEPMKCEPWDPETREYGPIMDPESPMYGKEEVYTEYKLNSAFAVGGPKC 294 Query: 352 LVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVID 411 LVKVIQKLSGL +NRF+A+DFVGF+KMV ALGGVEVCSTTP+ DYE+GTVL AGRQV++ Sbjct: 295 LVKVIQKLSGLHVNRFMAVDFVGFSKMVDALGGVEVCSTTPIEDYELGTVLPTAGRQVVN 354 Query: 412 GTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGD 471 G TALNYVRARQVTTE+NGDYGRIKRQQ ++T F+L+KLNNVV+MFIGD Sbjct: 355 GHTALNYVRARQVTTETNGDYGRIKRQQLFLSSLLRSLISKETFFSLSKLNNVVNMFIGD 414 Query: 472 SYVDNVKTKDLVELGQSLQGMAAGHITFVTVPT-GITDENGDEPPRTADMKALFSAIIDD 530 SYVDNV TKDLV+LGQS+QG+ AG ITF+TVPT G DE G+E PRT DM+ALF AII+D Sbjct: 415 SYVDNVDTKDLVDLGQSVQGVTAGRITFITVPTVGYADEYGNEIPRTDDMRALFDAIIND 474 Query: 531 EPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXX 590 +PLP E + + + DE+ TT PQ VTVQVSN Sbjct: 475 DPLPEERNPDNSPVPGTPESLAAEPGSGVDGEGPSDEI--VDAITTDPQNVTVQVSNSTG 532 Query: 591 XXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVT 650 + L+ +GFNV +PDDYP L+ TTV F+PGNE+AAATVA++FG++ VER + Sbjct: 533 QSGLGATASTALQSHGFNVESPDDYPGPLEKTTVFFSPGNEEAAATVASSFGDATVERAS 592 Query: 651 GIGEVVQVVLGADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G+G+VVQVVLG+DF +V AP PSGSSV V+I RN+ +P +LPEDLTVTNAADT+CE Sbjct: 593 GLGDVVQVVLGSDFNSVGAPSPSGSSVQVRIIRNTETPATELPEDLTVTNAADTSCE 649 >tr|A3Q684|A3Q684_MYCSJ Tax_Id=164757 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium sp.] Length = 701 Score = 612 bits (1578), Expect = e-173 Identities = 341/655 (52%), Positives = 417/655 (63%), Gaps = 33/655 (5%) Query: 59 GSHIDGGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADE--- 115 GSH G V+VA+LIAKL I + + EP E Sbjct: 74 GSHTAGVVTVADLIAKLNGDGSAPAELTPKRRRAEPEPEPPAPETEIIEAIREPVREPAD 133 Query: 116 --QLDTEVIAIPAYSLQLLSELPDLGSANYPHDESDPESPDEQXXXXXXXXXXXXXXXST 173 + DTE+I PA + ++LP L A P D P + Sbjct: 134 PDRQDTEII--PAATSAYAADLPVL--AEDPGDRVPPYRVGDGGTVV------------- 176 Query: 174 AKTPRPGKDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPH 233 +DEP RRR I+LAGR+ W+W +SKN +N VSALD Sbjct: 177 ------AEDEPHRRRR-IILAGRAAAALLAVLALVLTGGAWQWQTSKNGLMNRVSALDQE 229 Query: 234 SGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVV 293 S DIV+P+ Q+GDENFLIVG+D+R G NS +GAG T+DA GARSDTVMLVNIPANRKRVV Sbjct: 230 SRDIVDPNAQFGDENFLIVGVDSRIGENSGMGAGTTDDAAGARSDTVMLVNIPANRKRVV 289 Query: 294 AVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLV 353 AVSFPRDL+I P++CE WNP+TG YGPI D + G VYTE KLNS+++ GGPKCLV Sbjct: 290 AVSFPRDLSIDPMECEPWNPETGAYGPITDPESPMYGRETVYTEYKLNSAYAVGGPKCLV 349 Query: 354 KVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGT 413 KV+QKLSGLS+NRF+A+DF GF+KMV ALGGVEVCST PL DYE+GTVL AGRQ++DG Sbjct: 350 KVVQKLSGLSVNRFMAVDFAGFSKMVDALGGVEVCSTEPLEDYELGTVLPTAGRQMVDGH 409 Query: 414 TALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSY 473 TALNYVRARQVTTE NGDYGRIKRQQ ++ F+L+KLNNVV+MFI DSY Sbjct: 410 TALNYVRARQVTTEINGDYGRIKRQQRFLSSLLRSLISKEVFFSLSKLNNVVNMFIDDSY 469 Query: 474 VDNVKTKDLVELGQSLQGMAAGHITFVTVP-TGITDENGDEPPRTADMKALFSAIIDDEP 532 VDN+ T+DLV LGQS+QG+ AG I+FVTVP TG DE G+E PRT DM+ALF+AII+D+P Sbjct: 470 VDNIDTRDLVTLGQSIQGVTAGRISFVTVPTTGYADEYGNETPRTDDMRALFTAIINDDP 529 Query: 533 LPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXX 592 LP E + + + + V TT PQ+VTVQVSN Sbjct: 530 LPGEKNPDNTPVPGTPESTTADPEVAATESGGAELV---NAVTTEPQDVTVQVSNSTGQT 586 Query: 593 XXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGI 652 +L++ GFNV PDDYP++L TTV F+PGNEQAAATVA++F N +ERV+G+ Sbjct: 587 GLGATTAEELQQYGFNVTTPDDYPSALTETTVFFSPGNEQAAATVASSFANPTIERVSGM 646 Query: 653 GEVVQVVLGADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G++VQVVLG D+ AV AP PSGS V V + ++ S P LPEDL VTNAADTTCE Sbjct: 647 GDIVQVVLGNDYNAVAAPTPSGSPVQVNVLHDTGSTPAPLPEDLNVTNAADTTCE 701 >tr|Q1B3B7|Q1B3B7_MYCSS Tax_Id=164756 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium sp.] Length = 699 Score = 611 bits (1576), Expect = e-173 Identities = 341/655 (52%), Positives = 416/655 (63%), Gaps = 35/655 (5%) Query: 59 GSHIDGGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADE--- 115 GSH G V+VA+LIAKL I + + EP E Sbjct: 74 GSHTAGVVTVADLIAKLNGDGSAPAELTPKRRRAEPEPEPPAPETEIIEAIREPVREPAD 133 Query: 116 --QLDTEVIAIPAYSLQLLSELPDLGSANYPHDESDPESPDEQXXXXXXXXXXXXXXXST 173 + DTE+I PA + ++LP L A P D P + Sbjct: 134 PDRQDTEII--PAATSAYAADLPVL--AEDPGDRVPPYRVGDGGTVV------------- 176 Query: 174 AKTPRPGKDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPH 233 +DEP RRR I+LAGR+ W+W +SKN +N VSALD Sbjct: 177 ------AEDEPHRRRR-IILAGRAAAALLAVLALVLTGGAWQWQTSKNGLMNRVSALDQE 229 Query: 234 SGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVV 293 S DIV+P+ Q+GDENFLIVG+D+R G NS +GAG T+DA GARSDTVMLVNIPANRKRVV Sbjct: 230 SRDIVDPNAQFGDENFLIVGVDSRIGENSGMGAGTTDDAAGARSDTVMLVNIPANRKRVV 289 Query: 294 AVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLV 353 AVSFPRDL+I P++CE WNP+TG YGPI D + G VYTE KLNS+++ GGPKCLV Sbjct: 290 AVSFPRDLSIDPMECEPWNPETGAYGPITDPESPMYGRETVYTEYKLNSAYAVGGPKCLV 349 Query: 354 KVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGT 413 KV+QKLSGLS+NRF+A+DF GF+KMV ALGGVEVCST PL DYE+GTVL AGRQ++DG Sbjct: 350 KVVQKLSGLSVNRFMAVDFAGFSKMVDALGGVEVCSTEPLEDYELGTVLPTAGRQMVDGH 409 Query: 414 TALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSY 473 TALNYVRARQVTTE NGDYGRIKRQQ ++ F+L+KLNNVV+MFI DSY Sbjct: 410 TALNYVRARQVTTEINGDYGRIKRQQRFLSSLLRSLISKEVFFSLSKLNNVVNMFIDDSY 469 Query: 474 VDNVKTKDLVELGQSLQGMAAGHITFVTVP-TGITDENGDEPPRTADMKALFSAIIDDEP 532 VDN+ T+DLV LGQS+QG+ AG I+FVTVP TG DE G+E PRT DM+ALF+AII+D+P Sbjct: 470 VDNIDTRDLVTLGQSIQGVTAGRISFVTVPTTGYADEYGNETPRTDDMRALFTAIINDDP 529 Query: 533 LPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXX 592 LP E + + N + TT PQ+VTVQVSN Sbjct: 530 LPGEKNPD-----NVPGTPESTTADPEVAATESGGAELVNAVTTEPQDVTVQVSNSTGQT 584 Query: 593 XXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGI 652 +L++ GFNV PDDYP++L TTV F+PGNEQAAATVA++F N +ERV+G+ Sbjct: 585 GLGATTAEELQQYGFNVTTPDDYPSALTETTVFFSPGNEQAAATVASSFANPTIERVSGM 644 Query: 653 GEVVQVVLGADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G++VQVVLG D+ AV AP PSGS V V + ++ S P LPEDL VTNAADTTCE Sbjct: 645 GDIVQVVLGNDYNAVAAPTPSGSPVQVNVLHDTGSTPAPLPEDLNVTNAADTTCE 699 >tr|A1ULT3|A1ULT3_MYCSK Tax_Id=189918 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium sp.] Length = 699 Score = 611 bits (1576), Expect = e-173 Identities = 341/655 (52%), Positives = 416/655 (63%), Gaps = 35/655 (5%) Query: 59 GSHIDGGVSVAELIAKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADQVHEPADE--- 115 GSH G V+VA+LIAKL I + + EP E Sbjct: 74 GSHTAGVVTVADLIAKLNGDGSAPAELTPKRRRAEPEPEPPAPETEIIEAIREPVREPAD 133 Query: 116 --QLDTEVIAIPAYSLQLLSELPDLGSANYPHDESDPESPDEQXXXXXXXXXXXXXXXST 173 + DTE+I PA + ++LP L A P D P + Sbjct: 134 PDRQDTEII--PAATSAYAADLPVL--AEDPGDRVPPYRVGDGGTVV------------- 176 Query: 174 AKTPRPGKDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPH 233 +DEP RRR I+LAGR+ W+W +SKN +N VSALD Sbjct: 177 ------AEDEPHRRRR-IILAGRAAAALLAVLALVLTGGAWQWQTSKNGLMNRVSALDQE 229 Query: 234 SGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVV 293 S DIV+P+ Q+GDENFLIVG+D+R G NS +GAG T+DA GARSDTVMLVNIPANRKRVV Sbjct: 230 SRDIVDPNAQFGDENFLIVGVDSRIGENSGMGAGTTDDAAGARSDTVMLVNIPANRKRVV 289 Query: 294 AVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLV 353 AVSFPRDL+I P++CE WNP+TG YGPI D + G VYTE KLNS+++ GGPKCLV Sbjct: 290 AVSFPRDLSIDPMECEPWNPETGAYGPITDPESPMYGRETVYTEYKLNSAYAVGGPKCLV 349 Query: 354 KVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGT 413 KV+QKLSGLS+NRF+A+DF GF+KMV ALGGVEVCST PL DYE+GTVL AGRQ++DG Sbjct: 350 KVVQKLSGLSVNRFMAVDFAGFSKMVDALGGVEVCSTEPLEDYELGTVLPTAGRQMVDGH 409 Query: 414 TALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSY 473 TALNYVRARQVTTE NGDYGRIKRQQ ++ F+L+KLNNVV+MFI DSY Sbjct: 410 TALNYVRARQVTTEINGDYGRIKRQQRFLSSLLRSLISKEVFFSLSKLNNVVNMFIDDSY 469 Query: 474 VDNVKTKDLVELGQSLQGMAAGHITFVTVP-TGITDENGDEPPRTADMKALFSAIIDDEP 532 VDN+ T+DLV LGQS+QG+ AG I+FVTVP TG DE G+E PRT DM+ALF+AII+D+P Sbjct: 470 VDNIDTRDLVTLGQSIQGVTAGRISFVTVPTTGYADEYGNETPRTDDMRALFTAIINDDP 529 Query: 533 LPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXX 592 LP E + + N + TT PQ+VTVQVSN Sbjct: 530 LPGEKNPD-----NVPGTPESTTADPEVAATESGGAELVNAVTTEPQDVTVQVSNSTGQT 584 Query: 593 XXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGI 652 +L++ GFNV PDDYP++L TTV F+PGNEQAAATVA++F N +ERV+G+ Sbjct: 585 GLGATTAEELQQYGFNVTTPDDYPSALTETTVFFSPGNEQAAATVASSFANPTIERVSGM 644 Query: 653 GEVVQVVLGADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 G++VQVVLG D+ AV AP PSGS V V + ++ S P LPEDL VTNAADTTCE Sbjct: 645 GDIVQVVLGNDYNAVAAPTPSGSPVQVNVLHDTGSTPAPLPEDLNVTNAADTTCE 699 >tr|A1TFA8|A1TFA8_MYCVP Tax_Id=350058 SubName: Full=Cell envelope-related transcriptional attenuator;[Mycobacterium vanbaalenii] Length = 687 Score = 609 bits (1571), Expect = e-172 Identities = 327/576 (56%), Positives = 385/576 (66%), Gaps = 8/576 (1%) Query: 136 PDLGSANYPHDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPGKDEPKPRRRP---IL 192 P+LG P E P+ D T P PKPR RP I Sbjct: 116 PELGLGEEP--EPYPDGDDLDTMVLPALDPSRADLPDLTATRPPAHTLPKPRLRPSGRIA 173 Query: 193 LAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNPSGQYGDENFLIV 252 + GR W+W S+KNN LN VSALDP S DIV+P+ Q+GDENFLIV Sbjct: 174 VVGRVAAALVAVLALVLTGGAWQWQSAKNNLLNRVSALDPDSRDIVDPNAQFGDENFLIV 233 Query: 253 GMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAITPVKCEAWN 312 G D+R G N+ +GAG TEDA GARSDTVMLVNIPANRKRVVAVSFPRDL I P+KCE WN Sbjct: 234 GTDSRLGENAGIGAGTTEDAAGARSDTVMLVNIPANRKRVVAVSFPRDLEIEPMKCEPWN 293 Query: 313 PDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDF 372 P+T +YGPI D + G YTE KLNS+F+ GGPKCLVKVIQKLSGL +NRF+A+DF Sbjct: 294 PETREYGPISDPESPMYGMDEAYTEYKLNSAFAVGGPKCLVKVIQKLSGLHVNRFMAVDF 353 Query: 373 VGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTTESNGDY 432 VGF+KMV ALGGVEVCSTTP+ DYE+GTVL AGRQ++DG TALNYVRARQVTTE+NGDY Sbjct: 354 VGFSKMVDALGGVEVCSTTPIEDYELGTVLATAGRQIVDGHTALNYVRARQVTTETNGDY 413 Query: 433 GRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTKDLVELGQSLQGM 492 GRIKRQQ ++T F+L+KLNNVV+MFIGDSYVDNV TKDLV+LGQS+QG+ Sbjct: 414 GRIKRQQLFLSSLLRSLISKETFFSLSKLNNVVNMFIGDSYVDNVDTKDLVDLGQSVQGV 473 Query: 493 AAGHITFVTVPT-GITDENGDEPPRTADMKALFSAIIDDEPLPLENDHNAQTLGNRXXXX 551 AG ITFVTVPT G DE G+E PRT DM+ALF AII+D+PLP E + + + Sbjct: 474 NAGRITFVTVPTVGYADEWGNEIPRTEDMQALFDAIINDDPLPEERNADNTPVPGTPESL 533 Query: 552 XXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGFNVMA 611 E+ TT PQ VTVQVSN L+ GFNV Sbjct: 534 TNPAPAQPDQGQSGGEI--VDAITTDPQSVTVQVSNSTGSTGLGSTTADALQAYGFNVTT 591 Query: 612 PDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVLGADFKAVTAPP 671 PDDYP L TTV F+PGNE+AAATVA++F ++ +ERV G+ +VVQVVLG+DF AVTAP Sbjct: 592 PDDYPGPLPRTTVFFSPGNEEAAATVASSFADATIERVAGMDDVVQVVLGSDFNAVTAPS 651 Query: 672 PSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 PSGS V V + R + +P LPEDLTVTNAADT+C+ Sbjct: 652 PSGSPVQVHVIRGTKTPATTLPEDLTVTNAADTSCD 687 >tr|B1MI26|B1MI26_MYCA9 Tax_Id=561007 SubName: Full=Putative transcriptional regulator;[Mycobacterium abscessus] Length = 761 Score = 551 bits (1421), Expect = e-155 Identities = 293/543 (53%), Positives = 357/543 (65%), Gaps = 30/543 (5%) Query: 181 KDEPKPRRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNP 240 ++EPK RRPI L GRS W+WS+ KNNRLN V ALDP+S DI +P Sbjct: 231 EEEPKRSRRPIYL-GRSIAAVVAVCSLTVTGGAWQWSNVKNNRLNHVEALDPNSRDIRDP 289 Query: 241 SGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRD 300 + QYGDENFLI+G+DTRAGANS +GAGDT DA G RSDT+MLVNIPANRKRV VSFPRD Sbjct: 290 NAQYGDENFLIIGVDTRAGANSAMGAGDTSDAEGTRSDTMMLVNIPANRKRVAVVSFPRD 349 Query: 301 LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLS 360 LAI P CE WN DT YGP YTETKLNS+F+FGGPKCLVKVIQK+S Sbjct: 350 LAIQPTLCEVWNEDTKSYGP-----------DKAYTETKLNSAFAFGGPKCLVKVIQKMS 398 Query: 361 GLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVR 420 GL+INRF+ +DF GF+KMV ALGGVEVC+ TP+ DYE+GTVL++AGRQ IDG TAL YVR Sbjct: 399 GLNINRFLGVDFAGFSKMVDALGGVEVCTPTPIEDYELGTVLQNAGRQTIDGHTALQYVR 458 Query: 421 ARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTK 480 ARQVTTE NGDYGRIKRQQ +T F+L+KLNNVV+ FI DSYVDN++TK Sbjct: 459 ARQVTTEYNGDYGRIKRQQLFLSSLLRSMISHNTFFSLSKLNNVVNTFIDDSYVDNIRTK 518 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLE---- 536 DLV+LGQSLQ + AG ITF+TVPT TD G+E PRT D++ +F AII+D+PLP E Sbjct: 519 DLVDLGQSLQDVKAGRITFLTVPTDGTDSEGNETPRTTDIRKIFDAIINDDPLPGELLPD 578 Query: 537 ----------NDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVS 586 + + TT P E+ V VS Sbjct: 579 GTRVPMPGTTTQDTTLAASEHGAASELGETSTAPPTPAATPTEQVDLVTTEPSEINVHVS 638 Query: 587 NXXXXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKV 646 N SQL GF + DDYP++L TTTV F+PG+EQ AATVAA+FG +K+ Sbjct: 639 NSTGQTGLAASAASQLSNYGFGITTTDDYPSALPTTTVFFSPGHEQQAATVAASFGGAKL 698 Query: 647 ERVTGIGEVVQVVLGADFKA---VTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAAD 703 +R+TG V+VVLG+D+ + + APP +GS+V +Q+S + + P +LP DLTV NA D Sbjct: 699 QRITGAQTTVRVVLGSDYASTANLQAPPAAGSTVPLQLSSGAMA-PTELPMDLTVVNAGD 757 Query: 704 TTC 706 T+C Sbjct: 758 TSC 760 >tr|Q0S734|Q0S734_RHOSR Tax_Id=101510 SubName: Full=Possible transcriptional regulator, LytR family protein;[Rhodococcus sp.] Length = 682 Score = 395 bits (1015), Expect = e-107 Identities = 227/522 (43%), Positives = 297/522 (56%), Gaps = 26/522 (4%) Query: 187 RRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNPSGQYGD 246 +R+ + AGR+ W + S + + ++ALD S DIV+ GQ GD Sbjct: 186 KRKRLRAAGRAVVALVAVIALAGTGIVWGYLRSTEGKFDQIAALDTESTDIVDAVGQTGD 245 Query: 247 ENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAITPV 306 E +LIVG DTRAGA+ VGAG +DA G+R+DTVMLVNIPA+R RVVAVSFPRDL + Sbjct: 246 ETYLIVGSDTRAGASGEVGAGTIDDAEGSRADTVMLVNIPADRSRVVAVSFPRDLDVERP 305 Query: 307 KCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSINR 366 C+ W+ +G Y T + P KLN++++ GGPKCLVKVIQKLSGL I Sbjct: 306 VCQGWDNASGTY-------TEETFPAA--DGDKLNATYALGGPKCLVKVIQKLSGLKIGH 356 Query: 367 FIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTT 426 F+ +DF GF MV +GGV+VC+T PL D +GTVL AG Q++DG TALN+VRAR V Sbjct: 357 FVGMDFAGFESMVNEIGGVKVCTTQPLEDGVLGTVLPQAGTQMLDGKTALNFVRARHVEA 416 Query: 427 ESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTKDLVELG 486 E NGDYGRI RQQ L N +KLN ++ F D++V+N+ TK LV LG Sbjct: 417 EGNGDYGRINRQQRFLSALLRGALSSQVLLNPSKLNGFINAFTRDTFVENIDTKSLVTLG 476 Query: 487 QSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHNAQTLGN 546 +SLQ + AG +TF+TVPT T E G+E PRT D+KA+F AIIDDE LP E A+ L + Sbjct: 477 RSLQNVDAGAVTFLTVPTAGTTEWGNEIPRTDDIKAIFRAIIDDEALPGEK--RAEPLPS 534 Query: 547 RXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNG 606 V P VTVQVSN L G Sbjct: 535 APEPQAAPAPL--------------SVQAVDPSSVTVQVSNASGESGLAATVADSLAAEG 580 Query: 607 FNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVLGADFK- 665 F + +Y + T V F+PG+E AAT+A++F + +E TG+G VV+V LG+DF Sbjct: 581 FQIYNVGNYTGTSGETVVRFSPGHEAEAATLASSFPGAVLESTTGLGTVVEVALGSDFSG 640 Query: 666 AVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 V P P + +S+ R +++P DL V NA DT+CE Sbjct: 641 TVQTPSPIDTPLSMSGVREGQQEDVEIPADLAVVNAGDTSCE 682 >tr|C1ATD2|C1ATD2_RHOOB Tax_Id=632772 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus opacus] Length = 581 Score = 394 bits (1012), Expect = e-107 Identities = 225/522 (43%), Positives = 296/522 (56%), Gaps = 24/522 (4%) Query: 187 RRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNPSGQYGD 246 +R+ + AGR+ W + S + + ++ALD S DIV+ GQ GD Sbjct: 83 KRKRLRAAGRAVVALVAVVALAGTGIVWGYLRSTEGKFDQIAALDTESTDIVDAVGQTGD 142 Query: 247 ENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAITPV 306 E +LIVG DTRAGA+ VGAG +DA G+R+DTVMLVNIPA+R RVVAVSFPRDL + Sbjct: 143 ETYLIVGTDTRAGASGEVGAGTIDDAEGSRADTVMLVNIPADRSRVVAVSFPRDLDVERP 202 Query: 307 KCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSINR 366 C+ W+ D+G Y T + P KLN++++ GGPKCLVKVIQK+SGL I Sbjct: 203 VCQGWDNDSGTY-------TEETFPAA--DGDKLNATYALGGPKCLVKVIQKMSGLKIGH 253 Query: 367 FIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTT 426 F+ +DF GF MV +GGV+VC+T PL D +GTVL H G Q++DG TALN+VRAR V Sbjct: 254 FVGMDFAGFESMVNEIGGVKVCTTQPLEDDVLGTVLPHPGTQMLDGKTALNFVRARHVEA 313 Query: 427 ESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTKDLVELG 486 E NGDYGRI RQQ L N KLN ++ F D++V+N+ TK LV LG Sbjct: 314 EGNGDYGRINRQQRFLSALLRGALSSQVLLNPGKLNGFINAFTRDTFVENIDTKSLVTLG 373 Query: 487 QSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHNAQTLGN 546 +SLQ + AG +TF+TVPT T E G+E PRT D+KA+F AIIDDE LP E A+ L + Sbjct: 374 RSLQNVDAGAVTFLTVPTAGTTEWGNEIPRTDDIKAIFRAIIDDEALPGEK--RAEPLPS 431 Query: 547 RXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNG 606 Q V P VTVQVSN L G Sbjct: 432 TAPEPQAAPPTP------------QTVQAVDPSSVTVQVSNASGESGLAATVADTLAAEG 479 Query: 607 FNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVLGADFK- 665 F + +Y + T + F+PG+E AAT+A++F + +E TG+G VV+V +G+ F Sbjct: 480 FQIYNVGNYTGTSSETVIRFSPGHEAEAATLASSFPGAVLEATTGLGTVVEVAIGSSFTG 539 Query: 666 AVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 V P P + +SV R ++P DL V NA DT+C+ Sbjct: 540 TVQTPSPIDTPLSVSDVRIGQPEDAEIPADLAVVNAGDTSCD 581 >tr|D0L3U3|D0L3U3_GORB4 Tax_Id=526226 SubName: Full=Cell envelope-related function transcriptional attenuator, LytR/CpsA family;[Gordonia bronchialis] Length = 734 Score = 381 bits (979), Expect = e-103 Identities = 216/499 (43%), Positives = 287/499 (57%), Gaps = 21/499 (4%) Query: 214 WEWSSSKNNRLNTVSALDPHSGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAG 273 W + + N T++A+DP +I N GQYGDE +LIVG DTR G NS VGAGDT + Sbjct: 250 WGYLKNWNGAWRTITAVDPDDANIRNKEGQYGDETYLIVGTDTRGGNNSRVGAGDTSEVE 309 Query: 274 GARSDTVMLVNIPANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRM 333 GARSDTV+LVNIPANR RVVAVSFPRDL + C+ WN D G YG TG Sbjct: 310 GARSDTVILVNIPANRSRVVAVSFPRDLQVDRPDCKQWNNDAGSYGDTLYGATG------ 363 Query: 334 VYTETKLNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPL 393 KLNS ++ GGP+CLV+ + +SGL+IN FIA+DF GF K+V A+GGV+VCSTT L Sbjct: 364 ----VKLNSVYADGGPQCLVRTLTAMSGLNINHFIAMDFYGFEKVVNAVGGVDVCSTTSL 419 Query: 394 RDYEIGTVLEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXED 453 DYE+G +L+ G Q + G ALNYVRAR + +E NGDYGRIKRQQ + Sbjct: 420 YDYELGDILKRPGHQTLKGRKALNYVRARTIASEGNGDYGRIKRQQLFMSSLLRSVLSNN 479 Query: 454 TLFNLNKLNNVVDMFIGDSYVDNVKTKDLVELGQSLQGMAAGHITFVTVPT--GITDENG 511 L N KLN +V+ FI SYVD V T+ L++L +S++G+ AG ++F+TVPT TD + Sbjct: 480 VLSNPAKLNTIVNTFIRYSYVDGVNTESLLDLAESMEGIDAGKVSFITVPTTGTATDGSN 539 Query: 512 DEPPRTADMKALFSAIIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQ 571 +E P T + A+F+AIIDD+PLP E A T G+ + Sbjct: 540 NELPNTEGIDAIFNAIIDDQPLPREGGRKASTPGS-STTTSTDDSSSTPPPTTPETPTRV 598 Query: 572 QVTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNE 631 T + V V+V N QL +GF+V D S T V + PG + Sbjct: 599 SATAQNAANVGVRVLNGTGRTGLAGEVSQQLANSGFDVRGVADASESRTDTVVRYGPGQQ 658 Query: 632 QAAATVAAAFGNSKVERVTGIGEVVQVVLGADFK-AVTAPPPSGSSVSVQISRNSTSPPI 690 AAAT+AA + ++ + V+V+LG+ F ++ + P GS+VSV + P + Sbjct: 659 DAAATLAATIPGATIQSDRTVRSGVEVILGSGFTGSIGSVPEVGSAVSV----DQLPPSV 714 Query: 691 K---LPEDLTVTNAADTTC 706 + LP DL +TNA DTTC Sbjct: 715 RANNLPNDLAITNAGDTTC 733 >tr|C0ZP04|C0ZP04_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus erythropolis] Length = 530 Score = 368 bits (944), Expect = 2e-99 Identities = 213/529 (40%), Positives = 287/529 (54%), Gaps = 26/529 (4%) Query: 187 RRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNPSGQYGD 246 RR + GRS W + S + ++ALD S DI++ GQ GD Sbjct: 20 RRHRAKVIGRSAVAFLAVMSLALTGVVWGYLRSVEGGFDQIAALDTESDDIIDAGGQLGD 79 Query: 247 ENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAITPV 306 E +LI+G DTRAGA+ +GAG EDA GAR+DTVMLVNIPA+R RVVAVSFPRDL + Sbjct: 80 ETYLIIGTDTRAGASGEIGAGTVEDAEGARADTVMLVNIPADRSRVVAVSFPRDLDVERP 139 Query: 307 KCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSINR 366 C+ W+ D GKY T + P + KLN++++ GGPKCLVKVIQK+SGL I Sbjct: 140 ICQGWDNDAGKY-------TSETFPAA--SGDKLNATYALGGPKCLVKVIQKMSGLKIGH 190 Query: 367 FIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTT 426 F+ +DF GF +MV +GGV VCS P+ D +GTVL G Q++DG TALNYVRAR V Sbjct: 191 FVGMDFAGFERMVDTVGGVNVCSPGPIEDGILGTVLASGGTQMLDGRTALNYVRARHVEA 250 Query: 427 ESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTKDLVELG 486 E NGDYGRI RQQ L N +KLN ++ F D++V+N+ TK LV LG Sbjct: 251 EGNGDYGRITRQQKFLSALLRSALSNQVLLNPSKLNGFINAFTSDTFVENIDTKSLVTLG 310 Query: 487 QSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHNAQTLGN 546 +SLQ + AG +TF+TVPT T++ G+E PRT ++K+LF AIIDDEPLP E + Sbjct: 311 RSLQNVDAGAVTFLTVPTDGTNDWGNEIPRTDEIKSLFQAIIDDEPLPGEEREDTTPSST 370 Query: 547 RXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNG 606 V S ++V VSN L G Sbjct: 371 SSTTTPPTSSTPPAAT---------SVEAMSAYNISVDVSNASGIAGQAATIADSLAAYG 421 Query: 607 FNVMAPDDYPNSL-------QTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVV 659 F + ++ + TT V +A G E A TVA++ + + +G++++VV Sbjct: 422 FQISTVGNFSAATGLANAQASTTVVRYAAGYEAEAVTVASSIPGAVLVLAPSMGDMIEVV 481 Query: 660 LGADFK-AVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 +G++F V AP G+ ++ + TS LP D+ NA DTTC+ Sbjct: 482 VGSNFAGTVVAPADPGTILAANPTSVDTSTSTALPADIASVNAGDTTCD 530 >tr|C3JEH1|C3JEH1_RHOER Tax_Id=596309 SubName: Full=LytR/CpsA/Psr family protein;[Rhodococcus erythropolis SK121] Length = 602 Score = 367 bits (941), Expect = 4e-99 Identities = 212/529 (40%), Positives = 287/529 (54%), Gaps = 26/529 (4%) Query: 187 RRRPILLAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNPSGQYGD 246 RR + GRS W + S + ++ALD S DI++ GQ GD Sbjct: 92 RRHRAKVIGRSAVAFLAVMSLALTGVVWGYLRSVEGGFDQIAALDTESDDIIDAGGQLGD 151 Query: 247 ENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAITPV 306 E +LI+G DTRAGA+ +GAG EDA GAR+DTVMLVNIPA+R RVVAVSFPRDL + Sbjct: 152 ETYLIIGTDTRAGASGEIGAGTVEDAEGARADTVMLVNIPADRSRVVAVSFPRDLDVERP 211 Query: 307 KCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSINR 366 C+ W+ D GKY T + P + KLN++++ GGPKCLVKVIQK+SGL I Sbjct: 212 ICQGWDNDAGKY-------TSETFPAA--SGDKLNATYALGGPKCLVKVIQKMSGLKIGH 262 Query: 367 FIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTT 426 F+ +DF GF +MV +GGV VCS P+ D +GTVL G Q++DG TALNYVRAR V Sbjct: 263 FVGMDFAGFERMVDTVGGVNVCSPGPIEDGILGTVLASGGTQMLDGRTALNYVRARHVEA 322 Query: 427 ESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTKDLVELG 486 E NGDYGRI RQQ L N +KLN ++ F D++V+N+ TK LV LG Sbjct: 323 EGNGDYGRITRQQKFLSALLRSALSNQVLLNPSKLNGFINAFTSDTFVENIDTKSLVTLG 382 Query: 487 QSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHNAQTLGN 546 +SLQ + AG +TF+TVPT T++ G+E PRT ++K+LF AIIDD+PLP E + Sbjct: 383 RSLQNVDAGAVTFLTVPTDGTNDWGNEIPRTDEIKSLFQAIIDDDPLPGEEREDTTPSST 442 Query: 547 RXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNG 606 V S ++V VSN L G Sbjct: 443 SSTTTAPTSSTPPAAT---------SVEAMSAYNISVDVSNASGIAGQAATIADSLAAYG 493 Query: 607 FNVMAPDDYPNSL-------QTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVV 659 F + ++ + TT V +A G E A TVA++ + + +G++++VV Sbjct: 494 FQISTVGNFSAATGLANAQASTTVVRYAAGYEAEAVTVASSIPGAVLVLAPSMGDMIEVV 553 Query: 660 LGADFK-AVTAPPPSGSSVSVQISRNSTSPPIKLPEDLTVTNAADTTCE 707 +G++F V AP G+ ++ + TS LP D+ NA DTTC+ Sbjct: 554 VGSNFAGTVVAPADPGTILAANPTSVDTSTSTALPADIASVNAGDTTCD 602 >tr|Q5Z291|Q5Z291_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 837 Score = 337 bits (863), Expect = 4e-90 Identities = 206/499 (41%), Positives = 264/499 (52%), Gaps = 32/499 (6%) Query: 214 WEWSSSKNNRLNTVSALDPHSGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAG 273 W + S N VSALD +S DIV+ Q GDEN+L+VG DTRAGAN +GAG +DA Sbjct: 364 WSYLRSTGNDFTQVSALDENSEDIVDSDAQLGDENYLLVGTDTRAGANGQLGAGTLDDAE 423 Query: 274 GARSDTVMLVNIPANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRM 333 G+R+DT MLV+IP R RVV VSFPRDL +T KC W+ D + G Sbjct: 424 GSRADTTMLVHIPKARNRVVIVSFPRDLDVTRPKCNGWDGDKTYTKETFPPAIGD----- 478 Query: 334 VYTETKLNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPL 393 KLN+ ++ GGP+CLV IQ+L+G SIN FIAIDF GF MV + GVEVC+T PL Sbjct: 479 -----KLNAVYALGGPQCLVSTIQRLTGASINHFIAIDFAGFEAMVDKIDGVEVCATKPL 533 Query: 394 RDYEIGTVLEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXED 453 D +GT+LE G+Q I+G TAL YVRAR V E DY RI RQQ + Sbjct: 534 VDDVLGTILEKPGKQRINGETALKYVRARHVYGEERSDYDRINRQQRFLASLLRGALSSN 593 Query: 454 TLFNLNKLNNVVDMFIGDSYVD-NVKTKDLVELGQSLQGMAAGHITFVTVPTGITDENGD 512 +L KLN + F + VD K +DL+ LG+SLQ + AG +TF+TVPT T G+ Sbjct: 594 VFLDLGKLNGFIKEFTAHTMVDETTKPEDLLTLGRSLQKLDAGTVTFLTVPTAGTTAYGN 653 Query: 513 EPPRTADMKALFSAIIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQ 572 E PR +D+KA+F AI DD+PLP E Sbjct: 654 EIPRESDIKAIFKAIRDDQPLPGEK----------------PTTPADAPAPAPAAPTPST 697 Query: 573 VTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTT-VLFAPGNE 631 T P V++ VSN ++L+ +GF + +Y N TT V + G E Sbjct: 698 YTAVDPSTVSLLVSNGSGYDGLARTAATKLDNHGFTIYNVSNYANGTSATTKVRYGAGLE 757 Query: 632 QAAATVAAAFGNSKVERVTGIGEVVQVVLGADFK---AVTAPPPSGSSVS-VQISRNSTS 687 AATVA+A + +E +G +V+VV+G D V AP P G +S V S + S Sbjct: 758 AEAATVASAVPGATIEAADDLGGIVEVVVGTDSANGVTVQAPTPVGDVISNVATSTSVES 817 Query: 688 PPIKLPEDLTVTNAADTTC 706 P LP DL NAAD C Sbjct: 818 APAVLPADLEHVNAADEIC 836 >tr|A4FQC4|A4FQC4_SACEN Tax_Id=405948 SubName: Full=Possible transcriptional regulator, LytR family;[Saccharopolyspora erythraea] Length = 748 Score = 296 bits (758), Expect = 6e-78 Identities = 183/495 (36%), Positives = 260/495 (52%), Gaps = 36/495 (7%) Query: 214 WEWSSSKNNRLNTVSALDPHSGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAG 273 W + + + V++LDP+SGDI + + Q GD+NFL++G DTRAGA ++ G G+TED Sbjct: 286 WGAKTWVDGKFREVASLDPNSGDIKDAAKQTGDQNFLLIGSDTRAGATADDGVGNTEDEP 345 Query: 274 GARSDTVMLVNIPANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRM 333 GAR+DT M+ +IPA+R RVV VSFPRDL + CE W+ TG+Y TG P Sbjct: 346 GARADTTMIAHIPADRSRVVVVSFPRDLEVAIPACERWDAATGRY-------TGVQAPAQ 398 Query: 334 VYTETKLNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPL 393 + KLN +++ GGPKC KVIQ+LSGLSI F+ IDF GF MV A+ GV++C+ P+ Sbjct: 399 --EKAKLNQAYAVGGPKCTTKVIQQLSGLSITSFLGIDFQGFKSMVDAVHGVDICTQKPV 456 Query: 394 RDYEIGTVLEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXED 453 D IGTVL + G + G AL+YVRAR V + DYGR++RQQ Sbjct: 457 VDDVIGTVLPNPGHYNLTGQQALSYVRARHVQGDVTADYGRMQRQQLFLSALLRKTMSSQ 516 Query: 454 TLFNLNKLNNVVDMFIGDSYVDNVKTKDLVELGQSLQGMAAGHITFVTVP-TGITDENGD 512 L + NKL+ V+ +++ +NV T L+ELGQS+QG+ +TFVTVP TG +++G Sbjct: 517 VLLDPNKLSGFVNAVAANTFGENVGTDRLLELGQSMQGLDPSKVTFVTVPTTGYANDDGR 576 Query: 513 EPPRTADMKALFSAIIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQ 572 E R AD ALF AII E +P+ + G +Q Sbjct: 577 EELRAADNDALFRAII--EGVPVTPPASGGGTGGSTPSGGTGPMATAFTAHPLPAIQ--- 631 Query: 573 VTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQ 632 P +V V+V N +L GFNV +S T + +P N + Sbjct: 632 -----PSQVKVEVVNTTGSGGSAGTTGDRLREFGFNVTGTGQSGSSASGTVIKHSPANAE 686 Query: 633 AAATVAAAFGNSKVERVTGIGEVVQVVLGADFK-AVTAPPPSGSSVSVQISRNSTSPPIK 691 AA +A++ +++ G V+++ LGA F AV AP ++ P + Sbjct: 687 AAKLLASSVPGARLVEDASAGSVLRLELGAGFDGAVHAP---------------STAPAQ 731 Query: 692 LPEDLTVTNAADTTC 706 +PE+L NA C Sbjct: 732 VPENLATVNAGTDVC 746 >tr|C6WPQ9|C6WPQ9_ACTMD Tax_Id=446462 SubName: Full=Cell envelope-related transcriptional attenuator;[Actinosynnema mirum] Length = 1336 Score = 273 bits (699), Expect = 5e-71 Identities = 174/493 (35%), Positives = 252/493 (51%), Gaps = 45/493 (9%) Query: 221 NNRLNTVSALDPHSGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTV 280 ++++ + AL +S + Q GDENFLIVG DTRAGA G GDT + GARSD + Sbjct: 881 DSKITRIDALGQNSAAVHQAEKQLGDENFLIVGSDTRAGAKDTDGVGDTSEVVGARSDVM 940 Query: 281 MLVNIPANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGP-IYDETTGQMGPRMVYTETK 339 M+ ++PA+RKR+V VS PRDL +T C +W+ + Y + + G K Sbjct: 941 MIAHVPADRKRMVVVSMPRDLQVTRPACNSWDSASDTYSDKVLPQAEG----------VK 990 Query: 340 LNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIG 399 N ++ GGP+C+ K + +LSGL INRF+++DF GF MV A+G V VC+ T + D E+G Sbjct: 991 ANEVYATGGPQCVSKFMTELSGLDINRFVSVDFNGFKGMVDAVGTVGVCAPTVMDDGELG 1050 Query: 400 TVLEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLN 459 + + G+ +DG AL++VRAR+V TE GDY RIKRQQ + L + + Sbjct: 1051 MIFDKPGKYEVDGQKALDFVRARKVKTEEFGDYDRIKRQQQFLSALLRKAMSSELLLSPS 1110 Query: 460 KLNNVVDMFIGDSYVDNVKTKDLVELGQSLQGMAAGHITFVTVP----TGITDENGD--E 513 KLN ++ F + N+ ++ L QSLQG+ AG ++FVTVP G T N D E Sbjct: 1111 KLNGFLNAFASSTAGQNIGVDSMLTLAQSLQGLDAGRVSFVTVPHRTDEGPTPSNDDNFE 1170 Query: 514 PPRTADMKALFSAIIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQV 573 + + KALF A+ID PLP E A T G + + Q Sbjct: 1171 VLQEDETKALFQAVIDGTPLPGE----APTEGG----------------TTEKKAEKQPG 1210 Query: 574 TTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQA 633 T P V VQV N ++LE GF V P + T + +A GNE A Sbjct: 1211 TVGDPGSVRVQVFNQTSGGFAPKNTKTKLEEVGFKVTYIGVAPQASTRTFIRYATGNENA 1270 Query: 634 AATVAAAFGNSKVERVTGIGEVVQVVLGADFKAVTAPPPSGSSVSVQISRNSTSPPIKLP 693 AAT+ AA +++++ +G VV +++G++++ P +G V + Sbjct: 1271 AATLRAAVPDAELQVDESMGGVVALMMGSEWEGAVERPRAGQGGGVSADSGA-------- 1322 Query: 694 EDLTVTNAADTTC 706 DL V NAA C Sbjct: 1323 GDLPVVNAAVDPC 1335 >tr|C7MRB8|C7MRB8_SACVD Tax_Id=471857 SubName: Full=Cell envelope-related function transcriptional attenuator common domain protein;[Saccharomonospora viridis] Length = 619 Score = 258 bits (660), Expect = 1e-66 Identities = 155/408 (37%), Positives = 217/408 (53%), Gaps = 33/408 (8%) Query: 133 SELPDLGSANYPHDESDPESPDEQXXXXXXXXXXXXXXXSTAKTPRPGKDEPKPRRRPIL 192 +E D GSA DES + + + R G+D R + Sbjct: 195 TEADDTGSAGTDSDESTSDQDGSE---------------TRDHAERTGRD------RRAV 233 Query: 193 LAGRSXXXXXXXXXXXXXXXXWEWSSSKNNRLNTVSALDPHSGDIVNPSGQYGDENFLIV 252 LA ++ W + ++N + ALD S DI N S Q GD NFLIV Sbjct: 234 LASKAAVLVVAVLVFLGTGIGWGAKTWFEGQVNEILALDEDSADIRNASAQIGDANFLIV 293 Query: 253 GMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAITPVKCEAWN 312 G DTR GA + G TE GARSDTVML +IP +R+RVV +SFPRDL IT +C+ W+ Sbjct: 294 GSDTREGAEAEDNVGSTESIQGARSDTVMLAHIPEDRERVVVISFPRDLEITRPECQRWD 353 Query: 313 PDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDF 372 TG YG ET G KLN++F+ GGP+CL KVIQ++SG+ IN F+ IDF Sbjct: 354 SATGAYG----ETVGPA------EAVKLNTAFTIGGPRCLTKVIQQISGVRINHFVGIDF 403 Query: 373 VGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTTESN-GD 431 GF MV A+GGV + P+RD E+G ++ G ++ G AL++VRAR+V + D Sbjct: 404 QGFKGMVDAVGGVTMHFEEPMRDAELGLIVAETGDVLLKGEQALSFVRARKVYGDPTFSD 463 Query: 432 YGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTKDLVELGQSLQG 491 YGR+KRQQ D L ++ KL N F ++ +N+ ++ L QS++G Sbjct: 464 YGRMKRQQDFLASLLRKVLSGDVLLDMGKLTNFAQAFARSTFGENIGVDQMLTLAQSMKG 523 Query: 492 MAAGHITFVTVPT-GITDENGDEPPRTADMKALFSAIIDDEPLPLEND 538 + AG +TF+T+PT G +E G+E ++ LF A+ID+ PLP E + Sbjct: 524 LDAGKVTFLTIPTVGEANERGNEVLLESEAAKLFQALIDNTPLPGEEE 571 >tr|C8XA49|C8XA49_NAKMY Tax_Id=479431 SubName: Full=Cell envelope-related transcriptional attenuator;[Nakamurella multipartita] Length = 551 Score = 228 bits (581), Expect = 2e-57 Identities = 164/493 (33%), Positives = 241/493 (48%), Gaps = 42/493 (8%) Query: 235 GDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDA---GGARSDTVMLVNIPANRKR 291 G V P G++ EN L++G DTRAGA +N AG T+D+ G A SDT+M+ +I ++R Sbjct: 79 GTTVAP-GEFTPENILLLGSDTRAGA-ANAQAGGTDDSTADGVANSDTLMIAHISSDR-H 135 Query: 292 VVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKC 351 V +S PRD + C W+ TG + + Q P + +NS++S GGP+C Sbjct: 136 VTVLSIPRDTMVDAPTCRVWDGATG-------QLSDQTYPVSSGDKWHINSAYSVGGPQC 188 Query: 352 LVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVID 411 V+ +Q L+GL I+R I IDF GF MV ALGG+ V P+ D E+GTV+ G Q I Sbjct: 189 TVRAVQDLTGLRIDRVIGIDFAGFQSMVDALGGITVNVCRPIVDGELGTVVPDGGVQTIH 248 Query: 412 GTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGD 471 G AL+ VRAR+V +++ D RI+RQQ TL N KL+ + F+ + Sbjct: 249 GEQALSLVRARKVEGDTDSDLARIRRQQIVLSAILQQVTSAGTLLNPAKLDAFLQAFVQN 308 Query: 472 SYVDNVKTKDLVELGQSLQGMAAGHITFVTVPTGITDENGDE-PPRTADMKALFSAIIDD 530 ++ DNV DLV L QS+ + +TF T+PT + N D P A+F A+ +D Sbjct: 309 TFTDNVTIDDLVALAQSMGNLDPSKVTFYTLPTVPSRSNPDALDPDEDAANAVFEALRND 368 Query: 531 EPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXX 590 +PLP E+ T + TT P V + V N Sbjct: 369 QPLPGESGSTTSTAPSTPAVPEPSAGAVGGLATG---------TTVDPATVNLTVVNVTG 419 Query: 591 XXXXXXXXXSQLERNGFNVMAPD--DYPNSLQT-TTVLFAPGNEQAAATVAAAFGNSKVE 647 +L GF++ D P+ +Q+ T+ + P N AA TVAAA + V Sbjct: 420 RSGVAGQAMDELNNVGFDITDDDLQARPDDVQSAVTIEYDPTNLNAALTVAAAVPGATVV 479 Query: 648 RVTGIGEVVQVVLGADFKAVTAPPPSGSSVSV--------------QISRNSTSPPIKLP 693 V+G+G+ V+++LG D+ +P + +SV+ Q S ST+P + P Sbjct: 480 PVSGLGKSVRLLLGEDYDGSVSPVKAKASVTATMGSATSTPTASDDQDSAQSTAPSLTTP 539 Query: 694 EDLTVTNAADTTC 706 LT NA + C Sbjct: 540 --LTSINAGEALC 550 >tr|Q50048|Q50048_MYCLE Tax_Id=1769 SubName: Full=U2266o;[Mycobacterium leprae] Length = 222 Score = 221 bits (564), Expect = 2e-55 Identities = 113/196 (57%), Positives = 137/196 (69%), Gaps = 2/196 (1%) Query: 387 VCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXX 446 +C TP +DYE+G VL++ R+V++ T LNYVRAR+VTT+ GDY RIKRQQ Sbjct: 1 MCRKTPTQDYELGAVLDYRERKVVNRATVLNYVRARKVTTDFTGDYRRIKRQQLSLSSLL 60 Query: 447 XXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTKDLVELGQSLQGMAAGHITFVTVPTGI 506 DTLFNLNKLNN+V+MFI SYVDNVKTKDL +LG SLQGMA GHITFVTVPTG+ Sbjct: 61 SSTILSDTLFNLNKLNNLVNMFISKSYVDNVKTKDLAQLGMSLQGMATGHITFVTVPTGV 120 Query: 507 TDENGDEPPRTADMKALFSAIIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXD 566 TD NG+EPPRTADM+ LF AII+D+PLPLEN+ N Q+ G Sbjct: 121 TDGNGNEPPRTADMRVLFDAIINDDPLPLENNQNTQSSG--MTPTTTPTPKKAILNNPAP 178 Query: 567 EVQHQQVTTTSPQEVT 582 EVQH+Q+T TSP+ +T Sbjct: 179 EVQHKQMTITSPRGMT 194 >tr|C8X6R0|C8X6R0_NAKMY Tax_Id=479431 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Nakamurella multipartita] Length = 365 Score = 172 bits (435), Expect = 2e-40 Identities = 109/318 (34%), Positives = 166/318 (52%), Gaps = 23/318 (7%) Query: 221 NNRLNTVSALDPHSGDIVNPSGQYGD-ENFLIVGMDTRAGANSNVGAGDTEDAGGARSDT 279 N R VSA S +P G EN LI+G+DTR + + G G ++ SD Sbjct: 63 NIRTAPVSAAAAQSDGTADPGDTAGAAENILILGLDTRPPSQTAPGTGTSQ------SDV 116 Query: 280 VMLVNIPANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMV---YT 336 +M+ ++ A+R+RV VS PRDL IT C+AW D ++G + R Y+ Sbjct: 117 IMIAHVSADRQRVDLVSIPRDLMITAPTCKAW-----------DYSSGSLSDRDFDNPYS 165 Query: 337 ETKLNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDY 396 E K+ ++++ GGP C +K +Q L+G+ I+R I +F GF K+V A+GGV + P+ D Sbjct: 166 EWKITNAYAVGGPTCTIKAVQALTGVRIDRLIVFNFEGFKKIVDAMGGVTMTFPGPVVDN 225 Query: 397 EIGTVLEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLF 456 T+++ G ++++G AL VRAR+V + GD GRI RQQ D + Sbjct: 226 G-KTIIDAGGTRLVNGDQALALVRARRVAGDPTGDLGRIGRQQQLLSAMLAKAISSDLVG 284 Query: 457 NLNKLNNVVDMFIGDSYVDNVKTKDLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPR 516 + +LN+ + I ++ DNV DL EL +L+G + TVPT + D D Sbjct: 285 DPARLNSTLHTIIDNAVTDNVTVSDLAELAVALRGTGDAQVNDYTVPT-VPDSGTDGLRA 343 Query: 517 TADMKALFSAIIDDEPLP 534 A + A F A+I D+P+P Sbjct: 344 GAGINAYFDALIADQPIP 361 >tr|Q7WTY1|Q7WTY1_MYCSM Tax_Id=1772 SubName: Full=Putative uncharacterized protein;[Mycobacterium smegmatis] Length = 200 Score = 170 bits (430), Expect = 7e-40 Identities = 92/198 (46%), Positives = 119/198 (60%), Gaps = 9/198 (4%) Query: 519 DMKALFSAIIDDEPLPLE-NDHNAQTLGN--------RXXXXXXXXXXXXXXXXXXDEVQ 569 D++ALF AII+D+PLP E N N G + + Sbjct: 3 DVRALFDAIINDDPLPGEKNPDNTPVPGTPESTTNTAQAPQSTSPAPQPAHAAPAPGSAE 62 Query: 570 HQQVTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPG 629 TT PQ+VTV+VSN +LE++GFNV PDDYP L TTV F+PG Sbjct: 63 MVDTVTTEPQQVTVKVSNSTGQSGLAATAAGELEQHGFNVTTPDDYPGPLDATTVFFSPG 122 Query: 630 NEQAAATVAAAFGNSKVERVTGIGEVVQVVLGADFKAVTAPPPSGSSVSVQISRNSTSPP 689 NE+AAATVA++F N+ +ERV G+G+VVQVVLG DF AV P PSGS++ V++ R ++S P Sbjct: 123 NEEAAATVASSFSNAAIERVAGLGDVVQVVLGTDFMAVNPPSPSGSAIQVKLVRGTSSTP 182 Query: 690 IKLPEDLTVTNAADTTCE 707 +LPEDL+VTNAAD TCE Sbjct: 183 TQLPEDLSVTNAADATCE 200 >tr|Q47LW3|Q47LW3_THEFY Tax_Id=269800 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Thermobifida fusca] Length = 478 Score = 159 bits (403), Expect = 9e-37 Identities = 131/459 (28%), Positives = 210/459 (45%), Gaps = 51/459 (11%) Query: 240 PSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPR 299 P+ G N +I+G D R+GAN+ G G+ E G R DT+++ +I N + V+ PR Sbjct: 65 PTKVEGAINIMIIGSDVRSGANAEYG-GEIE---GERPDTLLIAHISPNHDGAILVNLPR 120 Query: 300 DLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKL 359 D + CE N D P M LNS+ ++GG +C KV+++L Sbjct: 121 DSIVDMPACEP-NGDR---------------PGMEAHRGMLNSAMNYGGIQCQWKVVEQL 164 Query: 360 SGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYV 419 +G+ I+ F+++DF GF +MV A+GGVE+C P+ D + L+ AGRQ ++G AL Y+ Sbjct: 165 TGIHIDHFVSVDFTGFKEMVDAIGGVEMCIPHPIDDPKAHLKLD-AGRQTLNGEQALGYM 223 Query: 420 RARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKT 479 R+R + + D RI RQQ + + + + + + VD+ T Sbjct: 224 RSRYGQGDGS-DLSRIDRQQVFLGAMLRKVMSGEIMSSPSSIYAFLSSVTDSITVDDQFT 282 Query: 480 KD-LVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRT-ADMKALFSAIIDDEPLPLEN 537 D + ++ ++ + +I FVTVP G ++ + T D LF AI +D + E Sbjct: 283 VDKMTDIAIQMREVDMSNIRFVTVPNGAHPDDANRVAWTQPDADRLFQAIANDTEITDEK 342 Query: 538 DHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXX 597 + + + + + V T P EV+V+V N Sbjct: 343 SDDEE-----------------------KDEEKEDVPTVDPAEVSVEVINGTTTSGLAGT 379 Query: 598 XXSQLERNGFNVMAPDDYPNSLQ-TTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVV 656 +L+ GF V + S+ TTV + PG E A TVAA + VE +G V Sbjct: 380 VGEELQARGFVVAGTGNPQGSVPGRTTVFYGPGMEAHAHTVAAQVKKAVVEESPYLGSTV 439 Query: 657 QVVLGADFKAVTAPPPSGSSVSVQISRNSTSPPIKLPED 695 Q+V+ D+ + SG S +V S N+ + + PED Sbjct: 440 QLVISMDWDGLKG-QSSGDSSNVLDSLNAKT--AEAPED 475 >tr|A0LRX6|A0LRX6_ACIC1 Tax_Id=351607 SubName: Full=Cell envelope-related transcriptional attenuator;[Acidothermus cellulolyticus] Length = 491 Score = 158 bits (400), Expect = 2e-36 Identities = 138/449 (30%), Positives = 202/449 (44%), Gaps = 66/449 (14%) Query: 237 IVNPSGQY---GDENFLIVGMDTRAGANSNVGA---GDTEDAGGARSDTVMLVNIPANRK 290 ++ P G G EN L+VG DTR GA G T+ G RSDTV+L ++ Sbjct: 61 VITPGGTKATGGAENVLLVGSDTRTGAGDQFAQAPKGQTQVLG-QRSDTVILAHLAKGHG 119 Query: 291 RVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPK 350 R VS PRD +T P Y + G + P + KLN++F+ GG Sbjct: 120 RATLVSLPRDSWVTI--------------PAYTDANGVLHPAH---QDKLNAAFALGGAA 162 Query: 351 CLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVI 410 LVK +Q+L+GL I+ ++ IDF GF +MV ALGGV+VC + P D G L AG + Sbjct: 163 LLVKTVQELTGLHIDHYVEIDFAGFQRMVDALGGVDVCLSRPAHDVNTGINLS-AGWHHL 221 Query: 411 DGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIG 470 +G AL +VR R GD RIKRQQ TL N KLN +D F Sbjct: 222 NGAQALAFVRQRYGL--PLGDLDRIKRQQQFLAAMMRKVESAGTLTNPLKLNAFLDAFTK 279 Query: 471 DSYVD-NVKTKDLVELGQSLQGMAAGHITFVTVP-TGITDENGD--EPPRTADMKALFSA 526 VD + T D+ +L SL+G++ G++ T+P G NG+ + TA + LF+A Sbjct: 280 SVTVDAGMSTADMEKLAVSLRGLSTGNVVLTTMPIAGFGTRNGESVDIVDTAKAQQLFAA 339 Query: 527 IIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVS 586 + D+ + + Q +T +V V+V Sbjct: 340 LAADQSVLSPS---------------------------------AQPSTLPRSQVHVRVF 366 Query: 587 NXXXXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAA-TVAAAFGNSK 645 N ++L + GF+V+ S TTTV+ P E AAA T+AA + Sbjct: 367 NAAGINGLAARASAELAQAGFDVIGTPANRGSGATTTVIEYPPAEAAAAHTLAAVIPGAV 426 Query: 646 VERVTGIGEVVQVVLGADFKAV-TAPPPS 673 + + + ++LG+D+ + T+ PS Sbjct: 427 LRPNDQLSGEIDLLLGSDYHGLATSSSPS 455 >tr|D1AF80|D1AF80_THECU Tax_Id=471852 SubName: Full=Cell envelope-related transcriptional attenuator;[Thermomonospora curvata DSM 43183] Length = 468 Score = 150 bits (378), Expect = 8e-34 Identities = 122/447 (27%), Positives = 195/447 (43%), Gaps = 67/447 (14%) Query: 234 SGDIVNPSGQYGDE--------NFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNI 285 +G+I + YG N L++G DTR GAN+ G G D RSDT++L+++ Sbjct: 53 NGNIARENINYGPRPEKLNDAMNILLLGSDTRTGANAKYGRGMQNDP--PRSDTMILLHL 110 Query: 286 PANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFS 345 ++ + +SFPRDL + C++ + GQ+ P + +N SF+ Sbjct: 111 SPGGEQAIGISFPRDLMVPIPSCKSRD--------------GQVVPAS--SIAMINESFT 154 Query: 346 FGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHA 405 GG C VK I+ L+ + I+ F+ +DFVGF + A+GGVE+C + D + L Sbjct: 155 RGGAPCTVKTIENLTNIRIDHFLQVDFVGFKNITTAVGGVEICLPKDVNDPQSRLRLS-K 213 Query: 406 GRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVV 465 GR ++ G TAL YVR R+ + D RIKRQQ L N KLN ++ Sbjct: 214 GRHIVKGETALAYVRTRK-ALGNGSDIDRIKRQQQFMASLANKAMSAGVLSNPVKLNALL 272 Query: 466 DMFIGDSYVD-NVKTKDLVELGQSLQGMAAGHITFVTVP-TGITDENGDEPPRTADMKAL 523 D ++ + + ++ + +QG+ AG + FVTVP T + R D Sbjct: 273 SAATKSLTTDEDLDLQAMTKIARGMQGLTAGKLRFVTVPWTQYPPDPNRVALRQPDADQF 332 Query: 524 FSAIIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTV 583 F+AI +D +P + + SP + V Sbjct: 333 FAAIRNDTGIPQKK---------------------------------RTAPKISPSRIRV 359 Query: 584 QVSNXXXXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGN 643 +V N QLE G+ V+ + +TT +L+ PG + A +A A + Sbjct: 360 RVYNASGIDGQARRVADQLEAQGYQVVGVGTL-TTRRTTRILYGPGAGREALALAEAVPD 418 Query: 644 S---KVERVTGIGEVVQVVLGADFKAV 667 + V R G +V +V+G D+ A+ Sbjct: 419 ADGQPVARANGTAGIVDLVVGPDWTAL 445 >tr|Q47LU7|Q47LU7_THEFY Tax_Id=269800 SubName: Full=Cell envelope-related transcriptional attenuator;[Thermobifida fusca] Length = 509 Score = 148 bits (373), Expect = 3e-33 Identities = 129/477 (27%), Positives = 203/477 (42%), Gaps = 81/477 (16%) Query: 216 WSSSKNNRLNTVSALDPHSGDIVNPSGQYGDENFLIVGMDTRAGANSN----VGAGDTED 271 W S + +R + + L + P G NFL++G D R+G +S +G G+ E Sbjct: 81 WLSDQLHRYDVFTGLLDEN----RPPASQGALNFLVIGSDDRSGLDSRQRSELGVGNVE- 135 Query: 272 AGGARSDTVMLVNIPANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGP 331 G RSDT+MLV++ R+ + V PRD +W G +GP Sbjct: 136 --GRRSDTMMLVHLNHQREHITVVGIPRD---------SWVRIPG-HGP----------- 172 Query: 332 RMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTT 391 K+N+++S GGP+ V+ ++ +G+ I+ ++ IDF GF ++V LGG+ VC Sbjct: 173 ------DKINAAYSLGGPQLAVQTVEAATGVRIDHYVEIDFTGFVEVVDTLGGITVCLPE 226 Query: 392 PLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXX 451 + D + LE AG + GT AL + R R+ +GD RI RQQ Sbjct: 227 AIHDEKAHLSLE-AGTHRLQGTQALAFARTRK---SPHGDLDRIDRQQQVLAALLDEALN 282 Query: 452 EDTLFNLNKLNNVVDMFIGDSYVDN-VKTKDLVELGQSLQGMAAGHITFVTVPTGITD-- 508 L + +L V+ +G VD+ + T L++LG L+ + +TF VP D Sbjct: 283 AQILSDPARLAQFVETALGSITVDDTLDTAALIQLGTQLRSLGLDDVTFTQVPVDRIDFW 342 Query: 509 -ENGDEPPRTADMKA--LFSAIIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXX 565 +G+ + A LF+AI D P+P L Sbjct: 343 TPSGEVAVTWHEQHATELFTAIAADRPIPQPQSAEDSAL--------------------- 381 Query: 566 DEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGFNV-MAPDDYP-NSLQTTT 623 SP EVTV+V N +L +GF V + ++P L T Sbjct: 382 ----------PSPDEVTVEVYNGTTIPGLGAQVRVELLESGFQVPESAGNWPQQDLAETL 431 Query: 624 VLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQVVLGADFKAVTAPPPSGSSVSVQ 680 V ++P E AA + + ++ E G+G VQV+ G + V P + S ++ Q Sbjct: 432 VRYSPEREDAATLLVESIPGARAEVDPGLGGRVQVIAGVNHTGVAVPAHAASPIAEQ 488 >tr|C6R4M0|C6R4M0_9MICC Tax_Id=553201 SubName: Full=LytR family regulatory protein;[Rothia mucilaginosa ATCC 25296] Length = 466 Score = 146 bits (368), Expect = 1e-32 Identities = 130/455 (28%), Positives = 201/455 (44%), Gaps = 73/455 (16%) Query: 245 GDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAIT 304 G + L++G DTR G N G D ++ AR+D +ML+ I +RK V +SFPRDL + Sbjct: 57 GALDILVIGSDTRKGNNGAYGDEDDRNSE-ARADVMMLLQISKDRKNVSVLSFPRDLMVD 115 Query: 305 PVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSI 364 +C +P++G P + ++N S S GG C V I KL+G++I Sbjct: 116 VPQCT--DPESGTVYPAEENV-------------QINESLSRGGAGCTVATISKLTGVNI 160 Query: 365 NRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQV 424 + F+ +DF ++ + +GGV+VC P+ D G L AG ++G AL ++R+R Sbjct: 161 DHFMLVDFNAVKELSKVVGGVQVCVDAPIDDEYSGLKLP-AGTSSVEGEQALAFLRSRHG 219 Query: 425 TTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVD----NVKTK 480 ++ + D GRI+ QQ E TL N +L N+ + + VD N+ T Sbjct: 220 FSDGS-DIGRIQAQQGFLSSLLRKVKSEGTLSNPGRLINIAEAITQNVTVDKNLGNIST- 277 Query: 481 DLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPLPLENDHN 540 LV +G +L G+ ++ F TVPT ++ + +AD +F + DD+ L E Sbjct: 278 -LVGVGATLGGVDLSNVVFATVPTEPWSQDANRLQVSADAANVFQRLRDDKSLKEEKAPE 336 Query: 541 AQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSP----QEVTVQVSNXXXXXXXXX 596 A T+ +P + V V V N Sbjct: 337 A------------------------------PATSAAPVQLDRTVPVSVYNATGLDGRSA 366 Query: 597 XXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEV- 655 S +E G++ + P N TTV ++ G E A +AA V RV EV Sbjct: 367 TIASVVEGLGYSNVTPGTSANPTNFTTVFYSTGYEAEAKEIAAKL---NVTRVVATEEVQ 423 Query: 656 -VQVVLGADFKAVTAPPPSGSSVSVQ---ISRNST 686 V V +G DF PSG ++ Q I+ N+T Sbjct: 424 GVSVTIGTDF-------PSGEAMEKQEAAIAGNAT 451 >tr|B5HX89|B5HX89_9ACTO Tax_Id=463191 SubName: Full=Transcriptional regulator;[Streptomyces sviceus ATCC 29083] Length = 554 Score = 144 bits (362), Expect = 5e-32 Identities = 121/456 (26%), Positives = 200/456 (43%), Gaps = 70/456 (15%) Query: 227 VSALDPHSGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGAR---SDTVMLV 283 ++ +DP P +G N L+VG D R GGA +DT+M+V Sbjct: 130 ITRVDPFKDMKNRPRAGHG-MNVLLVGTDGRDKITE--AERQKYRLGGAPCHCTDTIMIV 186 Query: 284 NIPANRKRVVAVSFPRD-LAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNS 342 +I +R+R VS PRD A+TP +A + + PI K+N+ Sbjct: 187 HISEDRERASVVSLPRDSYAMTPAHVDATTGERHRGHPI-----------------KINA 229 Query: 343 SFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVL 402 +++ GGP+ V+ ++ ++ + ++ ++ +DF F + V LGGVE+C+ PL+D G L Sbjct: 230 AYAEGGPQLTVRTVEDMTHVKVDHYLEVDFTSFMRTVDVLGGVEICNADPLKDTYTGLDL 289 Query: 403 EHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLN 462 AGR + G AL YVR+R + + D GR+KRQQ L N K Sbjct: 290 A-AGRHRLLGGQALQYVRSRH--ADGSSDLGRMKRQQRFLAALIERATSSGVLLNPMKFR 346 Query: 463 NVVDMFIGDSYVD-NVKTKDLVELGQSLQGMAAGHITFVTVP--------TGITDENGDE 513 +V +G D T +L++LG++++ + F TVP G+ + Sbjct: 347 DVARAVLGSVRADKGFGTDELLDLGRAMRNFSPSSSEFTTVPIGQMGYAVKGVGSTLKWD 406 Query: 514 PPRTADMKALFSAIIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQV 573 P ++A LF A+ +D+PL + L Sbjct: 407 PVKSA---RLFHALREDQPLAAHKPKDKALL----------------------------- 434 Query: 574 TTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGFNV--MAPDDYPNSLQTTTVLFAPGNE 631 SPQ++ VQV N + L GF + + +L+ T + + P + Sbjct: 435 VPVSPQQIRVQVENGTATGGLGKRVDAALASTGFRTTGIPANSADRTLKRTVIAYDPRWD 494 Query: 632 QAAATVAAAFGNSKVERVTGIGEVVQVVLGADFKAV 667 ++A ++AAA S++ V G G V++V+ GADF+ V Sbjct: 495 RSARSLAAALPGSELRAVKGQGAVLKVLAGADFERV 530 >tr|C9YZG9|C9YZG9_STRSW Tax_Id=680198 SubName: Full=Putative membrane protein;[Streptomyces scabies] Length = 482 Score = 142 bits (358), Expect = 2e-31 Identities = 123/432 (28%), Positives = 190/432 (43%), Gaps = 63/432 (14%) Query: 248 NFLIVGMDTRAGANSNVGAGDTEDAGGAR---SDTVMLVNIPANRKRVVAVSFPRD-LAI 303 N L+VG D R + GGA +DT+M+V+I +R+R VS PRD A Sbjct: 78 NVLLVGTDGRDRISEEERR--RYRLGGAPCHCTDTMMIVHISEDRERASVVSLPRDSYAE 135 Query: 304 TPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLS 363 TP + + T K PI KLN++++ GGP+ V+ ++ ++ + Sbjct: 136 TPGRTDRATGRTHKGHPI-----------------KLNAAYAEGGPQLTVRTVEHMTRVK 178 Query: 364 INRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQ 423 I+ ++ +DF F + V LGGV +C+ PL+D G L AG +DG AL YVR+R Sbjct: 179 IDHYVEVDFTSFMRTVDVLGGVRICTAQPLKDSYTGLDLT-AGTHELDGGQALQYVRSRH 237 Query: 424 VTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVD-NVKTKDL 482 + + D GR+KRQQ L N K ++ +G D T +L Sbjct: 238 --ADGSSDLGRMKRQQRFMASLMSQATSSGVLLNPMKFRDITQAVLGSVRADKEFGTGEL 295 Query: 483 VELGQSLQGMAAGHITFVTVP---TGITDENGDEPPRTADMKA--LFSAIIDDEPLPLEN 537 ++LG++L+ + F TVP G E + D KA LF A+ DD PL + Sbjct: 296 IDLGRALRNLTPASSEFTTVPIGRMGYAVEGIGSTLKWDDAKAARLFEALRDDRPL---S 352 Query: 538 DHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXX 597 + A+ + +PQ++ VQV N Sbjct: 353 PYKARA--------------------------RHALVDVAPQQIRVQVENGTAVPGLGMK 386 Query: 598 XXSQLERNGF-NVMAPDDYP-NSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEV 655 QL GF AP + P ++ T V++ P +++A ++A A S++ V G Sbjct: 387 VDRQLAATGFRTTKAPVNAPRQDVRRTVVVYDPRWDRSAHSLATALPGSELRPVRAQGPT 446 Query: 656 VQVVLGADFKAV 667 ++VV G DFK V Sbjct: 447 LRVVAGTDFKQV 458 >tr|C9N9B2|C9N9B2_9ACTO Tax_Id=591167 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Streptomyces flavogriseus ATCC 33331] Length = 454 Score = 142 bits (358), Expect = 2e-31 Identities = 120/457 (26%), Positives = 195/457 (42%), Gaps = 71/457 (15%) Query: 227 VSALDPHSGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTED--AGGAR---SDTVM 281 + +DP P+G +G NFL+VG D R + D + GGA +DT+M Sbjct: 29 IDRVDPFKDMKNRPAGGHG-MNFLLVGTDGR----DKISPADKKKYRLGGAPCHCTDTLM 83 Query: 282 LVNIPANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLN 341 LV++ A+++R VS PRD Y + + T G G + KLN Sbjct: 84 LVHVSADKQRASVVSLPRD----------------SYAELPEHTDGTTGKKHSAHPVKLN 127 Query: 342 SSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTV 401 ++++ GGP V+ +++++G+ I+ ++ +DF F K V LGGVE+C+ PL+D G Sbjct: 128 AAYAEGGPHLTVRTVEQMTGVKIDHYLEVDFTSFMKTVDTLGGVEICTAKPLKDAYTGLD 187 Query: 402 LEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKL 461 L AG +DG AL YVR+R + + D GR++RQQ L N K Sbjct: 188 LT-AGTHKLDGGQALQYVRSRHL--DGAADLGRMQRQQRFMAALIKQTTSSGVLMNPVKF 244 Query: 462 NNVVDMFIGDSYVD-NVKTKDLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTAD- 519 +V + D T+ ++ELG++++G F +VP +E G + Sbjct: 245 QDVASSMLKSVRADKGFGTEQMLELGKAMRGFTPSSSEFASVP---LEEEGFQVKGIGST 301 Query: 520 -------MKALFSAIIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQ 572 + +F A+ +D PL + Sbjct: 302 VKWDAEKSRKMFRALREDRPL----------------------------APHLPKQPRAT 333 Query: 573 VTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGFN-VMAP-DDYPNSLQTTTVLFAPGN 630 + +P+++ VQV N L GFN AP L+ T V + P Sbjct: 334 LVDVAPEQIRVQVYNGTSKDGLGQDVDEALRSTGFNTTRAPLGGGAGELERTLVSYDPRW 393 Query: 631 EQAAATVAAAFGNSKVERVTGIGEVVQVVLGADFKAV 667 +++A ++AAA ++ V G G ++V G+DF V Sbjct: 394 DRSAKSLAAALPGCELRAVKGQGGTMKVTAGSDFTEV 430 >tr|B5GDG4|B5GDG4_9ACTO Tax_Id=465543 SubName: Full=Transcriptional regulator;[Streptomyces sp. SPB74] Length = 414 Score = 142 bits (357), Expect = 2e-31 Identities = 105/327 (32%), Positives = 154/327 (47%), Gaps = 29/327 (8%) Query: 220 KNNRLNTVSALDPHSGDIVNPSG-QYGDENFLIVGMDTRAGANSNVGAGDTEDAGGARSD 278 +N +T +A + D PS G +N L++G D+RAG N G D G RSD Sbjct: 39 RNITEDTSAAAELRKYDRDRPSAVAKGAQNILLIGSDSRAGKNKEYG----RDGGTQRSD 94 Query: 279 TVMLVNIPANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTET 338 T +L+++ +RK AVS PRDL +T C G G R Sbjct: 95 TTILLHVSRDRKHATAVSVPRDLMVTIPSCR-----------------GADGTRSEERSA 137 Query: 339 KLNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEI 398 + N +F GG C V+ ++K++ + I+ +I +DF GF KMV A+GGV+VC P+ D + Sbjct: 138 QFNWAFERGGTACTVRTVEKMTNVRIDHYIVVDFEGFKKMVDAVGGVKVCVERPIDDKDA 197 Query: 399 GTVLEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNL 458 L AG Q +DG AL YVR R+ T D RI RQQ D L+N Sbjct: 198 HLKLA-AGDQKLDGEEALGYVRVRK-TLGDGSDTDRIDRQQKFLAALVSKMSGGDVLYNP 255 Query: 459 NKLNNVVDMFIGDSYVDN--VKTKDLVELGQSLQGMAAGHITFVTVP--TGITDENGDEP 514 KL V+D D +DL L + ++ + + F+TVP D N D+ Sbjct: 256 AKLYPVLDAATSALTTDPGLASLRDLYGLVREVRSVPTDDVRFLTVPREAYAADPNRDQL 315 Query: 515 PRTADMKALFSAIIDDEPLPLENDHNA 541 + D + LF+ + D P+ ++ D +A Sbjct: 316 VQ-PDAERLFAQLRKDSPVRVDPDPSA 341 >tr|Q82J68|Q82J68_STRAW Tax_Id=33903 SubName: Full=Putative transcriptional regulator;[Streptomyces avermitilis] Length = 379 Score = 139 bits (350), Expect = 1e-30 Identities = 92/302 (30%), Positives = 144/302 (47%), Gaps = 23/302 (7%) Query: 245 GDENFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAIT 304 G EN L++G DTR+G+N +G G D G ARSDT M+V+I K+ VS PRD + Sbjct: 88 GSENILVLGSDTRSGSNKKLGGGT--DDGSARSDTAMIVHIYRGHKKASVVSIPRDTLVE 145 Query: 305 PVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSI 364 +C TG+ G +Y ++ M NS++S GG C VK ++ ++G+ + Sbjct: 146 RPRC------TGRKGTVYPGSSSAM----------FNSAYSTGGAACAVKTVESMTGIRM 189 Query: 365 NRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQV 424 + ++ +DF GF ++ LGGV V +T + D + L+ AG +DG AL VR R Sbjct: 190 DHYLEVDFSGFQDLIDDLGGVRVTTTKDIADKDSHLDLK-AGTHTLDGRQALGLVRTRHG 248 Query: 425 TTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDN--VKTKDL 482 + + D GRI+ QQ L + KL ++ D D+ KDL Sbjct: 249 VGDGS-DLGRIQLQQAFIKALVNQVKHIGVLTSPTKLYDLADTATKTVTTDSELASVKDL 307 Query: 483 VELGQSLQGMAAGHITFVTVPTGITDENGDEP-PRTADMKALFSAIIDDEPLPLENDHNA 541 L+G+++ H+ VT+P N + A + ++ A+ DD +P H Sbjct: 308 ASFAGGLKGISSSHMNMVTMPVHYDAANANRVLVDKAKAQLIWKALKDDRAIPKAATHGT 367 Query: 542 QT 543 T Sbjct: 368 AT 369 >tr|C5C122|C5C122_BEUC1 Tax_Id=471853 SubName: Full=Cell envelope-related protein transcriptional attenuator;[Beutenbergia cavernae] Length = 395 Score = 139 bits (350), Expect = 1e-30 Identities = 103/298 (34%), Positives = 146/298 (48%), Gaps = 35/298 (11%) Query: 248 NFLIVGMDTRAGANSNVGAGDTEDAGGA--RSDTVMLVNIPANRKRVVAVSFPRDLAITP 305 N L++G DTR+G N+ + A EDA G RSD +L+++ A+R RV AVS PRD +T Sbjct: 75 NLLLLGSDTRSGDNAQIAA---EDAAGPDMRSDVTILLHVSADRSRVEAVSIPRDSWVTV 131 Query: 306 VKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPK--------CLVKVIQ 357 CE PD + P TG K N +F+ GG C ++ ++ Sbjct: 132 PPCEL--PDGSQSEP----RTG-----------KFNQAFAIGGASGDVTYAAACTIRTVE 174 Query: 358 KLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALN 417 L+G+ ++ F+AIDF+GF MV ALGGV VC P+ D + L+ AG QV+DG AL Sbjct: 175 TLTGIRVDGFLAIDFLGFRGMVDALGGVSVCLPEPIADPDANLYLD-AGEQVLDGDQALG 233 Query: 418 YVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVD-- 475 RAR+ T + D RI RQQ + L + +L +D D Sbjct: 234 LARARK-TIDDGSDVSRIDRQQLLLAAIARQATQAELLTDTPRLYAFLDALTSSVTADPR 292 Query: 476 NVKTKDLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAIIDDEPL 533 L L S++G+ A +TFVTVP + +G + D LF+A+ D PL Sbjct: 293 YGSLTSLAGLASSMRGLGAEDLTFVTVP-WVPRGDGANVLWSDDADTLFAAVAADTPL 349 >tr|A3TIS3|A3TIS3_9MICO Tax_Id=313589 SubName: Full=Cell envelope-related transcriptional attenuator;[Janibacter sp. HTCC2649] Length = 520 Score = 139 bits (350), Expect = 1e-30 Identities = 126/459 (27%), Positives = 191/459 (41%), Gaps = 58/459 (12%) Query: 221 NNRLNTVSALDPHSGDIVNPSGQY--GDENFLIVGMDTRAG-ANSNVGAGDTEDAGGARS 277 N ++ + + D P+G G N L++G D R G N + G G+ E G S Sbjct: 78 NGNIDRLDVSNMVGKDRPTPAGNLATGPLNILLIGSDVREGDGNEDYGTGNWEP--GQHS 135 Query: 278 DTVMLVNIPANRKRVVAVSFPRDLAI-TPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYT 336 DT ++++I +RK V VS PRD + +PV C+ P T + Sbjct: 136 DTNIVMHISGDRKSVTMVSIPRDSMVPSPVDCDGNAPVTQ------------------WR 177 Query: 337 ETKLNSSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDY 396 + N +F+ GGP C+++ ++ + + IN F +DF GF MV ALGGV VC+ T + D Sbjct: 178 VHQWNQNFNTGGPGCVIRTLEGNTNIFINHFAVVDFSGFKDMVDALGGVPVCTPTAINDP 237 Query: 397 EIGTVLEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLF 456 + L AGR +DG AL YVR R + D GRIKRQQ L Sbjct: 238 KAKFALS-AGRHTLDGEQALGYVRTR-YSLGDGSDIGRIKRQQAFLSSVAQQATDSKLLL 295 Query: 457 NLNKLNNVVDMFIGDSYVD-NVKTKDLVELGQSLQGMAAGHITFVTVPTGITDENGDEPP 515 +KL + +D + + ++ S++ + I FVTVPT ++ + Sbjct: 296 RPDKLLRFLGAATSSLQMDEDFGLGPMKDIAASVKNIGVDKIQFVTVPTEAYPKDTNRVQ 355 Query: 516 RTADMKALFSAIIDDEPL--PLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQV 573 L+ AI D L P T+ Sbjct: 356 WAPGADELWEAIRTDRDLGTPAPTPTPTSTV----------------------------P 387 Query: 574 TTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQA 633 T +P E+ VQV N + L GF+ + + + T+ F+ +E+ Sbjct: 388 LTVTPDEIRVQVVNASGVPGLAKQAVAALAVQGFDNPTSINGDGATKGATIEFSGEHEED 447 Query: 634 AATVAAAFGNSKVERV-TGIGEVVQVVLGADFKAVTAPP 671 A TVAAAF + V++ T +G V+V LG V A P Sbjct: 448 ARTVAAAFPGATVKKAETNLGSRVRVTLGVGAPDVVAVP 486 >tr|A6W3Y3|A6W3Y3_KINRD Tax_Id=266940 SubName: Full=Cell envelope-related transcriptional attenuator;[Kineococcus radiotolerans] Length = 506 Score = 138 bits (348), Expect = 2e-30 Identities = 131/461 (28%), Positives = 185/461 (40%), Gaps = 59/461 (12%) Query: 232 PHSGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAG-GARSDTVMLVNIPANRK 290 P +P+ N L++G DTRA ++ G E A GARSDT +LV++ A+R+ Sbjct: 76 PDDESTADPTTGQDAVNILVMGSDTRALSDGTGGEYGGESADPGARSDTTVLVHLAADRQ 135 Query: 291 RVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPK 350 VS PRD + C A + G P + + + NS+FS GG Sbjct: 136 SATLVSIPRDSMVQIPDCTA---EDGTTKPAH--------------KGQFNSAFSEGGAA 178 Query: 351 CLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVI 410 C ++ ++ ++G+ I+ ++ +DF GF MV ALGGV +C+ P+ D L AG Q + Sbjct: 179 CTLRTVEAVTGIFIDHYVVVDFSGFRSMVDALGGVTICTPEPIDDTRANLHLP-AGTQTV 237 Query: 411 DGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIG 470 DG TAL Y R R + S D RI RQQ L ++L + +D Sbjct: 238 DGETALAYARVRYIGDGS--DISRIGRQQALMSSMVQQVTSSGILLRPDRLYSFLDAATK 295 Query: 471 DSYVDN--VKTKDLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPRTADMKALFSAII 528 D ++ L QSLQ M A + FVTVPT + + TA + L+ I Sbjct: 296 SVTTDTGLASLTEIASLAQSLQKMPADGVRFVTVPTEEYPADRNRVQFTAAAETLWQQIR 355 Query: 529 DDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNX 588 D P + + D Q+ +P V VQV N Sbjct: 356 TDTAGPAATPSPSAS---------------------SDPAASSQL-LVAPSAVQVQVLNV 393 Query: 589 XXXXXXXXXXXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQA--AATVAAAFGNSKV 646 QL GF D + VL G QA A TVAAA G ++ Sbjct: 394 GAPAGTAATVADQLAGVGFVEAGTGDGEATEPGAGVLVRHGTGQADSANTVAAALGGART 453 Query: 647 ERVTGIGEVVQVVLGADFKAVT------------APPPSGS 675 +G V V + + VT AP PS S Sbjct: 454 RLDASLGRTVVVEVASAAVTVTDVRSRVTGTPAAAPSPSAS 494 >tr|Q82DF2|Q82DF2_STRAW Tax_Id=33903 SubName: Full=Putative transcriptional regulator;[Streptomyces avermitilis] Length = 508 Score = 137 bits (346), Expect = 4e-30 Identities = 126/459 (27%), Positives = 196/459 (42%), Gaps = 77/459 (16%) Query: 227 VSALDPHSGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTED--AGGAR---SDTVM 281 ++ +DP D+ N N L+VG D R + A + GGA +DT+M Sbjct: 85 IARVDPFK-DMKNRPAAGTGMNVLLVGTDGR----DKISAAERRKYRLGGAPCHCTDTIM 139 Query: 282 LVNIPANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLN 341 +V+I +R+R VS PRD Y + T G G R KLN Sbjct: 140 IVHISEDRERASIVSLPRD----------------SYAEMPTHTDGITGRRSRPQPIKLN 183 Query: 342 SSFSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTV 401 ++++ GGP V+ ++ ++ + I+ ++ +DF F K V LGGV++C+ PL+D G Sbjct: 184 AAYAQGGPNLTVRTVENMTHVKIDHYLEVDFTSFMKTVDVLGGVQICTPEPLKDSYTGLD 243 Query: 402 LEHAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKL 461 L AG + G AL YVRAR V + D GR++RQQ L N K Sbjct: 244 LA-AGTHRLRGGEALQYVRARHV--DGASDLGRMQRQQRFLASLVEQTTSSGALLNPLKF 300 Query: 462 NNVVDMFIGDSYVD-NVKTKDLVELGQSLQGMAAGHITFVTVP----TGITDENGDEPPR 516 +V +G D T +L++LG++++ + F TVP T + G + Sbjct: 301 RDVTRAVLGSVRADRGFGTDELLDLGRAMRNFSPSSSEFTTVPIRDMTHVVKGIG-STLK 359 Query: 517 TADMKA--LFSAIIDDEPLPLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVT 574 D KA LF ++ DD+PL VQH+ + Sbjct: 360 WDDAKAQKLFQSLRDDQPL----------------------------------VQHRSRS 385 Query: 575 TT-----SPQEVTVQVSNXXXXXXXXXXXXSQLERNGF-NVMAPDDYPNSLQTTTVLFAP 628 T +PQ++ VQV N L GF P +L+ T V + P Sbjct: 386 RTLRVDVAPQQIRVQVENATLTEGLGGRMDRALAATGFRTTRQPTKAAQTLKRTVVAYDP 445 Query: 629 GNEQAAATVAAAFGNSKVERVTGIGEVVQVVLGADFKAV 667 +++A ++AAA ++ V G G ++V++GAD V Sbjct: 446 RWDRSARSLAAALPGCELRAVPGQGPTLKVLVGADHTKV 484 >tr|B5GXX2|B5GXX2_STRCL Tax_Id=443255 SubName: Full=Transcriptional regulator;[Streptomyces clavuligerus ATCC 27064] Length = 431 Score = 137 bits (346), Expect = 4e-30 Identities = 94/292 (32%), Positives = 146/292 (50%), Gaps = 30/292 (10%) Query: 248 NFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAITPVK 307 N L++G DTRAG + G +D G R+DT +L+++ A+R+ A+S PRDL + Sbjct: 100 NILVLGSDTRAGKGN--GKYGRDDGGSQRADTTILLHLAADRRSATAMSIPRDLMVGIPS 157 Query: 308 CEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSINRF 367 C + G R + N +F FGG C ++ +++++G+ ++ Sbjct: 158 CRRAD-----------------GSRSTAQFAQFNWAFEFGGAACTIRTVERMTGIRVDHH 200 Query: 368 IAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTTE 427 + +DF GF KMV A+ GVEVC P+ D + L+ AGRQ +DG AL YVRAR+ + Sbjct: 201 VIVDFRGFKKMVDAVDGVEVCLAEPVDDPDARLTLD-AGRQTLDGEQALGYVRARKGIGD 259 Query: 428 SNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVD----MFIGDSYVDNVKTKDLV 483 + D GR+ RQQ L N +L V+ D +D++ KDL Sbjct: 260 GS-DTGRMDRQQQFLGSLVKKVQSNGVLLNPGRLYPVLQAATTSLTTDPGLDSL--KDLY 316 Query: 484 ELGQSLQGMAAGHITFVTVPTG--ITDENGDEPPRTADMKALFSAIIDDEPL 533 +L +S+Q + G + F+TVP D N DE + A LF + +D P+ Sbjct: 317 DLTRSVQDIPTGKVQFLTVPRQPYSADRNRDELIQPA-ADLLFRQLREDRPI 367 >tr|B5GDG7|B5GDG7_9ACTO Tax_Id=465543 SubName: Full=Transcriptional regulator;[Streptomyces sp. SPB74] Length = 502 Score = 137 bits (345), Expect = 5e-30 Identities = 117/431 (27%), Positives = 185/431 (42%), Gaps = 59/431 (13%) Query: 248 NFLIVGMDTRAGANSNVGAGDTEDAGGAR---SDTVMLVNIPANRKRVVAVSFPRD-LAI 303 N L+ G D RA + + GGA +DT+M+V++ A+ R VS PRD A+ Sbjct: 93 NLLLAGTDERAKLDKETR--ERYKLGGAPCHCTDTLMIVHLSADHSRASVVSLPRDSYAM 150 Query: 304 TPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLS 363 P P D +G+ KLN++++ GGP+ V+ ++KL+ + Sbjct: 151 LP--------------PHVDRNSGEHHHEH---PVKLNAAYAEGGPQLTVRTVEKLTKVK 193 Query: 364 INRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQ 423 I+ ++ +DF F + V ALGGVE+C+T PL+D G L AG +DG AL YVRAR Sbjct: 194 IDHYVEVDFTSFMRTVDALGGVEICTTRPLKDSYTGLDLS-AGSHELDGGQALQYVRARH 252 Query: 424 VTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVD-NVKTKDL 482 + S D GR++RQQ TL N +L+ V + D T ++ Sbjct: 253 LDAAS--DLGRMQRQQRFLAAVVDRATSGGTLLNPVRLHEVASALLSAVRADKGFGTDEI 310 Query: 483 VELGQSLQGMAAGHITFVTVPTGITDEN----GDEPPRTAD-MKALFSAIIDDEPLPLEN 537 ++L ++++G FV++P + GD AD KALF+A+ +D PL Sbjct: 311 LDLARAMRGFGPSSSEFVSMPLAAKGRHVPGIGDTLVWDADRAKALFTALREDHPLAAHK 370 Query: 538 DHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXX 597 PQ+++V+V + Sbjct: 371 PAPGPA---------------------------PVAVDVPPQQISVRVLHGTGAGDEAER 403 Query: 598 XXSQLERNGFNVMAPDDYPNSLQTTTVLFAPGNEQAAATVAAAFGNSKVERVTGIGEVVQ 657 L GF TTV + PG +++A ++A A + + R G+ ++ Sbjct: 404 VAKALRATGFAARTAATGTAGPARTTVSYDPGWDRSAKSLATALPGAALVRHKGLAATLE 463 Query: 658 VVLGADFKAVT 668 V +G D AVT Sbjct: 464 VTVGEDHPAVT 474 >tr|D1A4I4|D1A4I4_THECU Tax_Id=471852 SubName: Full=Cell envelope-related transcriptional attenuator;[Thermomonospora curvata DSM 43183] Length = 481 Score = 137 bits (344), Expect = 7e-30 Identities = 117/397 (29%), Positives = 169/397 (42%), Gaps = 55/397 (13%) Query: 248 NFLIVGMDTRAGANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAITPVK 307 N L++G D+R G N G+ D GG SDT +L++I +R + +SFPRD + + Sbjct: 80 NILLLGSDSREGDNKRFGS----DQGGG-SDTTILMHISPGGERAIGISFPRDSMVQIPE 134 Query: 308 CEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLSINRF 367 C+ + G R+ +LN ++SF GP C +I+ L+ + I+ + Sbjct: 135 CKKKD-----------------GTRVPSQFGQLNWAYSFAGPACTWNLIESLTDIRIDHY 177 Query: 368 IAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQVTTE 427 ID GF ++V ALGGVE+C P+RD + VL+ GRQV+ G A+ YVR R Sbjct: 178 AEIDMSGFIEVVDALGGVEICVPKPIRDPKADLVLK-KGRQVVMGKQAIGYVRTRTGGLG 236 Query: 428 SNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDNVKTKDLVE-LG 486 D RIKRQQ L + + + VD+ T ++ L Sbjct: 237 DGSDLSRIKRQQAFMGSVVKKATSSGLLKDPARTYAFLQAVAKAVKVDDRLTLGTMQKLA 296 Query: 487 QSLQGMAAGHITFVTVPTGITDENGDEPPRTADM---KALFSAIIDDEPLPLENDHNAQT 543 SL+G++AG +TFVTVP +T D+ DM K LF AI +D LP E Sbjct: 297 ASLRGLSAGKVTFVTVP--VTAYPADKNRVQIDMARAKPLFDAIREDNELPPEEPKQPAR 354 Query: 544 LGNRXXXXXXXXXXXXXXXXXXDEVQHQQVTTTSPQEVTVQVSNXXXXXXXXXXXXSQLE 603 Q+ P E V V N L Sbjct: 355 -------------------------QNGGQPPAKPAETKVAVYNGTTTDGLGQRTADGLA 389 Query: 604 RNGFNVMAPDDYPNSLQ-TTTVLFAPGNEQAAATVAA 639 GF ++ S T +L+ PG E+ AA +AA Sbjct: 390 EQGFQIVKVGTKQQSADIPTRILYGPGAERQAAALAA 426 >tr|Q9KZK3|Q9KZK3_STRCO Tax_Id=1902 SubName: Full=Putative transcriptional regulator;[Streptomyces coelicolor] Length = 396 Score = 135 bits (341), Expect = 1e-29 Identities = 100/294 (34%), Positives = 144/294 (48%), Gaps = 29/294 (9%) Query: 245 GDENFLIVGMDTRAG-ANSNVGAGDTEDAGGARSDTVMLVNIPANRKRVVAVSFPRDLAI 303 G +N L++G D+RAG N+ G D+G RSDT +L+++ A R V AVS PRDL + Sbjct: 87 GAQNVLLIGSDSRAGEGNARYG----RDSGTERSDTTILLHLAAGRDSVTAVSLPRDLMV 142 Query: 304 TPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSSFSFGGPKCLVKVIQKLSGLS 363 C PD P + N +F+ GG C ++ ++KL+G+ Sbjct: 143 QVPGCH--RPDGSLTEPALQQ---------------FNYAFAAGGSACSIRTVEKLTGIR 185 Query: 364 INRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLEHAGRQVIDGTTALNYVRARQ 423 I+ + +DF GF +MV AL GVEVC P+ D + L AGR +DG AL YVRAR+ Sbjct: 186 IDHHVVVDFEGFKEMVDALDGVEVCLRKPVDDKDAKLKLP-AGRVTLDGEQALGYVRARK 244 Query: 424 VTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNNVVDMFIGDSYVDN--VKTKD 481 + D R+ RQQ D L N KL V+D D +D Sbjct: 245 -SLGDGSDTDRMDRQQRFLGALVSKVQSNDVLLNPVKLYPVLDAATSSLTTDPGLASLRD 303 Query: 482 LVELGQSLQGMAAGHITFVTVP--TGITDENGDEPPRTADMKALFSAIIDDEPL 533 L +L + L+G+ + F+TVP + D N D+ + A K LF+ + DEP+ Sbjct: 304 LYDLVRGLRGIPTERVQFLTVPRESYSGDANRDQLVQPAAEK-LFTRLRTDEPV 356 >tr|B1VUU3|B1VUU3_STRGG Tax_Id=455632 SubName: Full=Putative transcriptional regulator;[Streptomyces griseus subsp. griseus] Length = 460 Score = 135 bits (341), Expect = 1e-29 Identities = 125/457 (27%), Positives = 193/457 (42%), Gaps = 65/457 (14%) Query: 227 VSALDPHSGDIVNPSGQYGDENFLIVGMDTRAGANSNVGAGDTEDAGGAR---SDTVMLV 283 + +DP P G +G N L+VG D R GGA +DT+MLV Sbjct: 29 IGRVDPFKDMKNRPQGGHGT-NLLLVGTDGRDTITE--AERKKYRLGGAPCHCTDTIMLV 85 Query: 284 NIPANRKRVVAVSFPRDLAITPVKCEAWNPDTGKYGPIYDETTGQMGPRMVYTETKLNSS 343 ++ A+R+R VS PRD Y + T G KLN++ Sbjct: 86 HLSADRQRASVVSLPRD----------------SYAEMPAHTDRTTGKHHESHPVKLNAA 129 Query: 344 FSFGGPKCLVKVIQKLSGLSINRFIAIDFVGFAKMVQALGGVEVCSTTPLRDYEIGTVLE 403 ++ GGP V+ ++ ++ + I+ ++ +DF F K V A+GGV++C+ P++D G L Sbjct: 130 YAEGGPTLTVRTVENMTKVKIDHYLEVDFTSFMKTVDAVGGVKICTARPMKDSYTGLNLP 189 Query: 404 HAGRQVIDGTTALNYVRARQVTTESNGDYGRIKRQQXXXXXXXXXXXXEDTLFNLNKLNN 463 AG +DG AL YVR+R V S D GR++RQQ L N K Sbjct: 190 -AGSHELDGGRALQYVRSRHVDVGS--DLGRMQRQQKFLAALIKQVTSSGVLLNPVKFQQ 246 Query: 464 VVDMFIGDSYVD-NVKTKDLVELGQSLQGMAAGHITFVTVPTGITDENGDEPPR------ 516 V +G D T+ ++ LG++++G F +VP G N P + Sbjct: 247 VSASALGSVRADEGFGTEQMLALGKAMKGFGPASSEFASVPVG----NPSFPVKGIGSTV 302 Query: 517 ---TADMKALFSAIIDDEPL-PLENDHNAQTLGNRXXXXXXXXXXXXXXXXXXDEVQHQQ 572 A K LF A+ +D+PL P E A + Sbjct: 303 RWDAAKAKKLFQALREDKPLAPAEPKPAA-----------------------GPKEPAAT 339 Query: 573 VTTTSPQEVTVQVSNXXXXXXXXXXXXSQLERNGF-NVMAP-DDYPNSLQTTTVLFAPGN 630 + +P++V VQV N L GF AP + L+ T V + P Sbjct: 340 LVDVAPEQVRVQVYNGTPKDGLGRTVDQALRATGFATTEAPLNGEARELKRTLVEYDPRW 399 Query: 631 EQAAATVAAAFGNSKVERVTGIGEVVQVVLGADFKAV 667 +++A ++AAA S+++ V G G ++V +G+DF V Sbjct: 400 DRSAKSLAAALPGSELKAVKGQGPQLKVTVGSDFTEV 436 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.312 0.131 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 4,444,953,247 Number of extensions: 164615820 Number of successful extensions: 268025 Number of sequences better than 10.0: 2248 Number of HSP's gapped: 265877 Number of HSP's successfully gapped: 2301 Length of query: 707 Length of database: 3,846,993,858 Length adjustment: 145 Effective length of query: 562 Effective length of database: 2,212,089,423 Effective search space: 1243194255726 Effective search space used: 1243194255726 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 84 (37.0 bits)