BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4929 (222 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HH78|B2HH78_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 367 e-100 tr|Q743I4|Q743I4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 247 6e-64 tr|A0QAP8|A0QAP8_MYCA1 Tax_Id=243243 SubName: Full=Transcription... 247 6e-64 sp|P67433|Y790_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized H... 242 2e-62 sp|P67432|Y767_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized H... 242 2e-62 tr|C1ALA3|C1ALA3_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 242 2e-62 tr|A5U0F5|A5U0F5_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 242 2e-62 tr|A1KGQ0|A1KGQ0_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 242 2e-62 tr|A5WKD6|A5WKD6_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 242 2e-62 tr|A4KF83|A4KF83_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 242 2e-62 tr|A2VG70|A2VG70_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 242 2e-62 tr|A0PLG0|A0PLG0_MYCUA Tax_Id=362242 SubName: Full=Putative unch... 238 5e-61 tr|A0R4J9|A0R4J9_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 222 2e-56 tr|C6DUT5|C6DUT5_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 212 3e-53 tr|Q1B351|Q1B351_MYCSS Tax_Id=164756 SubName: Full=Transcription... 210 1e-52 tr|A3Q6F0|A3Q6F0_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 210 1e-52 tr|A1UM00|A1UM00_MYCSK Tax_Id=189918 SubName: Full=Transcription... 210 1e-52 tr|A1TFH9|A1TFH9_MYCVP Tax_Id=350058 SubName: Full=Transcription... 202 3e-50 tr|A4T7M5|A4T7M5_MYCGI Tax_Id=350054 SubName: Full=Transcription... 200 1e-49 tr|B1MKL3|B1MKL3_MYCA9 Tax_Id=561007 SubName: Full=Putative tran... 192 2e-47 tr|B2HSR1|B2HSR1_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 143 1e-32 tr|Q73ZX2|Q73ZX2_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 139 2e-31 tr|A0QGV6|A0QGV6_MYCA1 Tax_Id=243243 SubName: Full=Transcription... 139 2e-31 tr|A0PSN2|A0PSN2_MYCUA Tax_Id=362242 SubName: Full=Putative unch... 138 4e-31 tr|C1BBG1|C1BBG1_RHOOB Tax_Id=632772 SubName: Full=Putative TetR... 129 2e-28 tr|Q0S7N2|Q0S7N2_RHOSR Tax_Id=101510 SubName: Full=Possible tran... 128 4e-28 tr|C1A0D4|C1A0D4_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR... 127 9e-28 tr|C3JQJ0|C3JQJ0_RHOER Tax_Id=596309 SubName: Full=Transcription... 127 9e-28 tr|C1A0F3|C1A0F3_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR... 122 2e-26 tr|C3JQH1|C3JQH1_RHOER Tax_Id=596309 SubName: Full=Transcription... 122 2e-26 tr|Q5YWM0|Q5YWM0_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 122 4e-26 tr|Q5YQN2|Q5YQN2_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 120 1e-25 tr|Q1B1N5|Q1B1N5_MYCSS Tax_Id=164756 SubName: Full=Transcription... 116 2e-24 tr|A3Q7W0|A3Q7W0_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 116 2e-24 tr|A1UNG4|A1UNG4_MYCSK Tax_Id=189918 SubName: Full=Transcription... 116 2e-24 tr|A0R6A5|A0R6A5_MYCS2 Tax_Id=246196 SubName: Full=Putative tran... 115 5e-24 tr|A1TH29|A1TH29_MYCVP Tax_Id=350058 SubName: Full=Transcription... 114 6e-24 tr|D0L394|D0L394_GORB4 Tax_Id=526226 SubName: Full=Regulatory pr... 108 6e-22 tr|A3PX85|A3PX85_MYCSJ Tax_Id=164757 SubName: Full=Putative tran... 100 1e-19 tr|A1TDW0|A1TDW0_MYCVP Tax_Id=350058 SubName: Full=Transcription... 83 2e-14 tr|A4IN44|A4IN44_GEOTN Tax_Id=420246 SubName: Full=Transcription... 49 5e-04 tr|D1AE68|D1AE68_THECU Tax_Id=471852 SubName: Full=Transcription... 49 5e-04 tr|B4BKA5|B4BKA5_9BACI Tax_Id=495036 SubName: Full=Transcription... 49 5e-04 tr|C7MT69|C7MT69_SACVD Tax_Id=471857 SubName: Full=Transcription... 47 0.002 tr|Q828P9|Q828P9_STRAW Tax_Id=33903 SubName: Full=Putative TetR-... 47 0.002 tr|A4T9Y1|A4T9Y1_MYCGI Tax_Id=350054 SubName: Full=Transcription... 47 0.002 tr|Q87TM9|Q87TM9_VIBPA Tax_Id=670 SubName: Full=Transcriptional ... 45 0.006 tr|Q1QIK6|Q1QIK6_NITHX Tax_Id=323097 SubName: Full=Transcription... 45 0.006 tr|C7NHU0|C7NHU0_KYTSD Tax_Id=478801 SubName: Full=Transcription... 45 0.006 tr|A6B4T4|A6B4T4_VIBPA Tax_Id=419109 SubName: Full=Transcription... 45 0.006 >tr|B2HH78|B2HH78_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 222 Score = 367 bits (942), Expect = e-100 Identities = 195/222 (87%), Positives = 196/222 (88%) Query: 1 VSSDALVTVTDQQQHESGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARAGV 60 +SSDALVTVTDQQQHESGD VLAAGMDTLRASSYPDLTVRMVAARAGV Sbjct: 1 MSSDALVTVTDQQQHESGDRRRNRRQEETFRRVLAAGMDTLRASSYPDLTVRMVAARAGV 60 Query: 61 SPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEVXX 120 SPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV Sbjct: 61 SPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEVGA 120 Query: 121 XXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSG 180 DPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSG Sbjct: 121 ACTAALLGGGADPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSG 180 Query: 181 EFTYHEVADRLADVAVLILVGAGQAAPGDDLAEPAAEAGEDA 222 EFTYHEVADRLADVAVLILVGAGQAAPGDDLAEPAAEAGEDA Sbjct: 181 EFTYHEVADRLADVAVLILVGAGQAAPGDDLAEPAAEAGEDA 222 >tr|Q743I4|Q743I4_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 215 Score = 247 bits (631), Expect = 6e-64 Identities = 134/207 (64%), Positives = 150/207 (72%) Query: 1 VSSDALVTVTDQQQHESGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARAGV 60 +SSDALVT+T E+G VLAAG++TLR SY DLTVR VAARA V Sbjct: 1 MSSDALVTITSDAGGETGQPPRNRRQEETFRKVLAAGIETLREKSYSDLTVRAVAARAKV 60 Query: 61 SPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEVXX 120 +PATAYTYFSSKNHLIAEVYLDLVR+VP+FTDVN M RV Q LRHLALVVADEPEV Sbjct: 61 APATAYTYFSSKNHLIAEVYLDLVRQVPYFTDVNDPMPTRVEQVLRHLALVVADEPEVSA 120 Query: 121 XXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSG 180 DPAVRA RD+IG EIHRRI SA+GP A P T++ALEM+FFGALV AGSG Sbjct: 121 ACTTALLSGGADPAVRAARDRIGVEIHRRITSAMGPDADPTTVSALEMSFFGALVQAGSG 180 Query: 181 EFTYHEVADRLADVAVLILVGAGQAAP 207 EF+Y E+ADRLA V LIL G QA+P Sbjct: 181 EFSYREIADRLAYVVRLILTGTTQASP 207 >tr|A0QAP8|A0QAP8_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium avium] Length = 215 Score = 247 bits (631), Expect = 6e-64 Identities = 134/207 (64%), Positives = 150/207 (72%) Query: 1 VSSDALVTVTDQQQHESGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARAGV 60 +SSDALVT+T E+G VLAAG++TLR SY DLTVR VAARA V Sbjct: 1 MSSDALVTITSDAGGETGQPPRNRRQEETFRKVLAAGIETLREKSYSDLTVRAVAARAKV 60 Query: 61 SPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEVXX 120 +PATAYTYFSSKNHLIAEVYLDLVR+VP+FTDVN M RV Q LRHLALVVADEPEV Sbjct: 61 APATAYTYFSSKNHLIAEVYLDLVRQVPYFTDVNDPMPTRVEQVLRHLALVVADEPEVSA 120 Query: 121 XXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSG 180 DPAVRA RD+IG EIHRRI SA+GP A P T++ALEM+FFGALV AGSG Sbjct: 121 ACTTALLSGGADPAVRAARDRIGVEIHRRITSAMGPDADPTTVSALEMSFFGALVQAGSG 180 Query: 181 EFTYHEVADRLADVAVLILVGAGQAAP 207 EF+Y E+ADRLA V LIL G QA+P Sbjct: 181 EFSYREIADRLAYVVRLILTGTTQASP 207 >sp|P67433|Y790_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized HTH-type transcriptional regulator Mb0790c;[Mycobacterium bovis] Length = 213 Score = 242 bits (618), Expect = 2e-62 Identities = 136/210 (64%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Query: 1 VSSDALVTVTDQQQHE--SGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARA 58 +SSD LVT Q+Q E + VLAA M TLR SY DLTVR+VAARA Sbjct: 1 MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYADLTVRLVAARA 60 Query: 59 GVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV 118 V+PATAYTYFSSKNHLIAEVYLDLVR+VP TDVNV M RV +LRHLALVVADEPE+ Sbjct: 61 KVAPATAYTYFSSKNHLIAEVYLDLVRQVPCVTDVNVPMPIRVTSSLRHLALVVADEPEI 120 Query: 119 XXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAG 178 DPAVRAVRD+IGAEIHRRI SAIGPGA PGT+ ALEMAFFGALV AG Sbjct: 121 GAACTAALLDGGADPAVRAVRDRIGAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAG 180 Query: 179 SGEFTYHEVADRLADVAVLILVGAGQAAPG 208 SG FTYHE+ADRL V LIL GA + + G Sbjct: 181 SGTFTYHEIADRLGYVVGLILAGANEPSTG 210 >sp|P67432|Y767_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized HTH-type transcriptional regulator Rv0767c/MT0791;[Mycobacterium tuberculosis] Length = 213 Score = 242 bits (618), Expect = 2e-62 Identities = 136/210 (64%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Query: 1 VSSDALVTVTDQQQHE--SGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARA 58 +SSD LVT Q+Q E + VLAA M TLR SY DLTVR+VAARA Sbjct: 1 MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYADLTVRLVAARA 60 Query: 59 GVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV 118 V+PATAYTYFSSKNHLIAEVYLDLVR+VP TDVNV M RV +LRHLALVVADEPE+ Sbjct: 61 KVAPATAYTYFSSKNHLIAEVYLDLVRQVPCVTDVNVPMPIRVTSSLRHLALVVADEPEI 120 Query: 119 XXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAG 178 DPAVRAVRD+IGAEIHRRI SAIGPGA PGT+ ALEMAFFGALV AG Sbjct: 121 GAACTAALLDGGADPAVRAVRDRIGAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAG 180 Query: 179 SGEFTYHEVADRLADVAVLILVGAGQAAPG 208 SG FTYHE+ADRL V LIL GA + + G Sbjct: 181 SGTFTYHEIADRLGYVVGLILAGANEPSTG 210 >tr|C1ALA3|C1ALA3_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 213 Score = 242 bits (618), Expect = 2e-62 Identities = 136/210 (64%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Query: 1 VSSDALVTVTDQQQHE--SGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARA 58 +SSD LVT Q+Q E + VLAA M TLR SY DLTVR+VAARA Sbjct: 1 MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYADLTVRLVAARA 60 Query: 59 GVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV 118 V+PATAYTYFSSKNHLIAEVYLDLVR+VP TDVNV M RV +LRHLALVVADEPE+ Sbjct: 61 KVAPATAYTYFSSKNHLIAEVYLDLVRQVPCVTDVNVPMPIRVTSSLRHLALVVADEPEI 120 Query: 119 XXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAG 178 DPAVRAVRD+IGAEIHRRI SAIGPGA PGT+ ALEMAFFGALV AG Sbjct: 121 GAACTAALLDGGADPAVRAVRDRIGAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAG 180 Query: 179 SGEFTYHEVADRLADVAVLILVGAGQAAPG 208 SG FTYHE+ADRL V LIL GA + + G Sbjct: 181 SGTFTYHEIADRLGYVVGLILAGANEPSTG 210 >tr|A5U0F5|A5U0F5_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 213 Score = 242 bits (618), Expect = 2e-62 Identities = 136/210 (64%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Query: 1 VSSDALVTVTDQQQHE--SGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARA 58 +SSD LVT Q+Q E + VLAA M TLR SY DLTVR+VAARA Sbjct: 1 MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYADLTVRLVAARA 60 Query: 59 GVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV 118 V+PATAYTYFSSKNHLIAEVYLDLVR+VP TDVNV M RV +LRHLALVVADEPE+ Sbjct: 61 KVAPATAYTYFSSKNHLIAEVYLDLVRQVPCVTDVNVPMPIRVTSSLRHLALVVADEPEI 120 Query: 119 XXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAG 178 DPAVRAVRD+IGAEIHRRI SAIGPGA PGT+ ALEMAFFGALV AG Sbjct: 121 GAACTAALLDGGADPAVRAVRDRIGAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAG 180 Query: 179 SGEFTYHEVADRLADVAVLILVGAGQAAPG 208 SG FTYHE+ADRL V LIL GA + + G Sbjct: 181 SGTFTYHEIADRLGYVVGLILAGANEPSTG 210 >tr|A1KGQ0|A1KGQ0_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_0819c;[Mycobacterium bovis] Length = 213 Score = 242 bits (618), Expect = 2e-62 Identities = 136/210 (64%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Query: 1 VSSDALVTVTDQQQHE--SGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARA 58 +SSD LVT Q+Q E + VLAA M TLR SY DLTVR+VAARA Sbjct: 1 MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYADLTVRLVAARA 60 Query: 59 GVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV 118 V+PATAYTYFSSKNHLIAEVYLDLVR+VP TDVNV M RV +LRHLALVVADEPE+ Sbjct: 61 KVAPATAYTYFSSKNHLIAEVYLDLVRQVPCVTDVNVPMPIRVTSSLRHLALVVADEPEI 120 Query: 119 XXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAG 178 DPAVRAVRD+IGAEIHRRI SAIGPGA PGT+ ALEMAFFGALV AG Sbjct: 121 GAACTAALLDGGADPAVRAVRDRIGAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAG 180 Query: 179 SGEFTYHEVADRLADVAVLILVGAGQAAPG 208 SG FTYHE+ADRL V LIL GA + + G Sbjct: 181 SGTFTYHEIADRLGYVVGLILAGANEPSTG 210 >tr|A5WKD6|A5WKD6_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 213 Score = 242 bits (618), Expect = 2e-62 Identities = 136/210 (64%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Query: 1 VSSDALVTVTDQQQHE--SGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARA 58 +SSD LVT Q+Q E + VLAA M TLR SY DLTVR+VAARA Sbjct: 1 MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYADLTVRLVAARA 60 Query: 59 GVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV 118 V+PATAYTYFSSKNHLIAEVYLDLVR+VP TDVNV M RV +LRHLALVVADEPE+ Sbjct: 61 KVAPATAYTYFSSKNHLIAEVYLDLVRQVPCVTDVNVPMPIRVTSSLRHLALVVADEPEI 120 Query: 119 XXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAG 178 DPAVRAVRD+IGAEIHRRI SAIGPGA PGT+ ALEMAFFGALV AG Sbjct: 121 GAACTAALLDGGADPAVRAVRDRIGAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAG 180 Query: 179 SGEFTYHEVADRLADVAVLILVGAGQAAPG 208 SG FTYHE+ADRL V LIL GA + + G Sbjct: 181 SGTFTYHEIADRLGYVVGLILAGANEPSTG 210 >tr|A4KF83|A4KF83_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 213 Score = 242 bits (618), Expect = 2e-62 Identities = 136/210 (64%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Query: 1 VSSDALVTVTDQQQHE--SGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARA 58 +SSD LVT Q+Q E + VLAA M TLR SY DLTVR+VAARA Sbjct: 1 MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYADLTVRLVAARA 60 Query: 59 GVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV 118 V+PATAYTYFSSKNHLIAEVYLDLVR+VP TDVNV M RV +LRHLALVVADEPE+ Sbjct: 61 KVAPATAYTYFSSKNHLIAEVYLDLVRQVPCVTDVNVPMPIRVTSSLRHLALVVADEPEI 120 Query: 119 XXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAG 178 DPAVRAVRD+IGAEIHRRI SAIGPGA PGT+ ALEMAFFGALV AG Sbjct: 121 GAACTAALLDGGADPAVRAVRDRIGAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAG 180 Query: 179 SGEFTYHEVADRLADVAVLILVGAGQAAPG 208 SG FTYHE+ADRL V LIL GA + + G Sbjct: 181 SGTFTYHEIADRLGYVVGLILAGANEPSTG 210 >tr|A2VG70|A2VG70_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 213 Score = 242 bits (618), Expect = 2e-62 Identities = 136/210 (64%), Positives = 149/210 (70%), Gaps = 2/210 (0%) Query: 1 VSSDALVTVTDQQQHE--SGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARA 58 +SSD LVT Q+Q E + VLAA M TLR SY DLTVR+VAARA Sbjct: 1 MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYADLTVRLVAARA 60 Query: 59 GVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV 118 V+PATAYTYFSSKNHLIAEVYLDLVR+VP TDVNV M RV +LRHLALVVADEPE+ Sbjct: 61 KVAPATAYTYFSSKNHLIAEVYLDLVRQVPCVTDVNVPMPIRVTSSLRHLALVVADEPEI 120 Query: 119 XXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAG 178 DPAVRAVRD+IGAEIHRRI SAIGPGA PGT+ ALEMAFFGALV AG Sbjct: 121 GAACTAALLDGGADPAVRAVRDRIGAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAG 180 Query: 179 SGEFTYHEVADRLADVAVLILVGAGQAAPG 208 SG FTYHE+ADRL V LIL GA + + G Sbjct: 181 SGTFTYHEIADRLGYVVGLILAGANEPSTG 210 >tr|A0PLG0|A0PLG0_MYCUA Tax_Id=362242 SubName: Full=Putative uncharacterized protein;[Mycobacterium ulcerans] Length = 139 Score = 238 bits (606), Expect = 5e-61 Identities = 124/139 (89%), Positives = 126/139 (90%) Query: 84 VRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIG 143 +RKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV DPAVRAVRDQIG Sbjct: 1 MRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEVGAACTAALLGGGADPAVRAVRDQIG 60 Query: 144 AEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLILVGAG 203 AEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSG+FTYHEVADRLADVAVLILVGAG Sbjct: 61 AEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSGKFTYHEVADRLADVAVLILVGAG 120 Query: 204 QAAPGDDLAEPAAEAGEDA 222 QAAPGDDLAEPAAEAGEDA Sbjct: 121 QAAPGDDLAEPAAEAGEDA 139 >tr|A0R4J9|A0R4J9_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium smegmatis] Length = 199 Score = 222 bits (566), Expect = 2e-56 Identities = 123/199 (61%), Positives = 142/199 (71%), Gaps = 4/199 (2%) Query: 1 VSSDALVTVTDQQQHESGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARAGV 60 +SSDA+ VT G+ VL AG++ LR SSY DLTVR VAARA V Sbjct: 1 MSSDAVAAVTPS----GGETPRNRRQEETFRKVLTAGIEMLRESSYADLTVRAVAARAKV 56 Query: 61 SPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEVXX 120 +PATAYTYFSSKNHLIAEVYLDLVR+VP+FTDVN +M+ RV +ALR L LVVADEPEV Sbjct: 57 APATAYTYFSSKNHLIAEVYLDLVRQVPYFTDVNDSMKTRVDKALRALTLVVADEPEVAA 116 Query: 121 XXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSG 180 D AVRAVRD+IGAEIH+RI SA+GP A P T++ALEM FFGALV+AGSG Sbjct: 117 ACTTALLGGGSDEAVRAVRDRIGAEIHKRIRSAVGPDADPRTVSALEMTFFGALVNAGSG 176 Query: 181 EFTYHEVADRLADVAVLIL 199 FTYH++ADRL V LIL Sbjct: 177 AFTYHQIADRLTYVVGLIL 195 >tr|C6DUT5|C6DUT5_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 204 Score = 212 bits (539), Expect = 3e-53 Identities = 120/182 (65%), Positives = 130/182 (71%), Gaps = 2/182 (1%) Query: 1 VSSDALVTVTDQQQHE--SGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARA 58 +SSD LVT Q+Q E + VLAA M TLR SY DLTVR+VAARA Sbjct: 1 MSSDVLVTTPAQRQTEPHAEAVSRNRRQQATFRKVLAAAMATLREKSYADLTVRLVAARA 60 Query: 59 GVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEV 118 V+PATAYTYFSSKNHLIAEVYLDLVR+VP TDVNV M RV +LRHLALVVADEPE+ Sbjct: 61 KVAPATAYTYFSSKNHLIAEVYLDLVRQVPCVTDVNVPMPIRVTSSLRHLALVVADEPEI 120 Query: 119 XXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAG 178 DPAVRAVRD+IGAEIHRRI SAIGPGA PGT+ ALEMAFFGALV AG Sbjct: 121 GAACTAALLDGGADPAVRAVRDRIGAEIHRRITSAIGPGADPGTVFALEMAFFGALVQAG 180 Query: 179 SG 180 SG Sbjct: 181 SG 182 >tr|Q1B351|Q1B351_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 203 Score = 210 bits (534), Expect = 1e-52 Identities = 111/167 (66%), Positives = 130/167 (77%), Gaps = 1/167 (0%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTD 92 VL+AG++ LR SSY DLTVR VAARA V+PATAYTYFSSKNHLIAEVYLDL+R+VP+FTD Sbjct: 25 VLSAGVEMLRESSYADLTVRAVAARARVAPATAYTYFSSKNHLIAEVYLDLIRQVPYFTD 84 Query: 93 VNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIAS 152 VN +M RV +ALR + L++ADEPEV D AVR RD+IGAEIH+RI S Sbjct: 85 VNDSMPTRVDKALRSMTLILADEPEV-AAACTTALLSNSDAAVRTARDRIGAEIHKRITS 143 Query: 153 AIGPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 AIGPGA P ++ALEM FFGALV+AGSG FTYHE+ADRL V L+L Sbjct: 144 AIGPGADPRKVSALEMTFFGALVNAGSGVFTYHEIADRLTYVVGLVL 190 >tr|A3Q6F0|A3Q6F0_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 203 Score = 210 bits (534), Expect = 1e-52 Identities = 111/167 (66%), Positives = 130/167 (77%), Gaps = 1/167 (0%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTD 92 VL+AG++ LR SSY DLTVR VAARA V+PATAYTYFSSKNHLIAEVYLDL+R+VP+FTD Sbjct: 25 VLSAGVEMLRESSYADLTVRAVAARARVAPATAYTYFSSKNHLIAEVYLDLIRQVPYFTD 84 Query: 93 VNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIAS 152 VN +M RV +ALR + L++ADEPEV D AVR RD+IGAEIH+RI S Sbjct: 85 VNDSMPTRVDKALRSMTLILADEPEV-AAACTTALLSNSDAAVRTARDRIGAEIHKRITS 143 Query: 153 AIGPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 AIGPGA P ++ALEM FFGALV+AGSG FTYHE+ADRL V L+L Sbjct: 144 AIGPGADPRKVSALEMTFFGALVNAGSGVFTYHEIADRLTYVVGLVL 190 >tr|A1UM00|A1UM00_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 203 Score = 210 bits (534), Expect = 1e-52 Identities = 111/167 (66%), Positives = 130/167 (77%), Gaps = 1/167 (0%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTD 92 VL+AG++ LR SSY DLTVR VAARA V+PATAYTYFSSKNHLIAEVYLDL+R+VP+FTD Sbjct: 25 VLSAGVEMLRESSYADLTVRAVAARARVAPATAYTYFSSKNHLIAEVYLDLIRQVPYFTD 84 Query: 93 VNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIAS 152 VN +M RV +ALR + L++ADEPEV D AVR RD+IGAEIH+RI S Sbjct: 85 VNDSMPTRVDKALRSMTLILADEPEV-AAACTTALLSNSDAAVRTARDRIGAEIHKRITS 143 Query: 153 AIGPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 AIGPGA P ++ALEM FFGALV+AGSG FTYHE+ADRL V L+L Sbjct: 144 AIGPGADPRKVSALEMTFFGALVNAGSGVFTYHEIADRLTYVVGLVL 190 >tr|A1TFH9|A1TFH9_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium vanbaalenii] Length = 198 Score = 202 bits (513), Expect = 3e-50 Identities = 112/199 (56%), Positives = 139/199 (69%), Gaps = 5/199 (2%) Query: 1 VSSDALVTVTDQQQHESGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARAGV 60 +S+DA+ +T+ E G+ VLAAG++ LR SSY DLTVR VAARA V Sbjct: 1 MSNDAVAQLTE----EPGNPPRNRRQEETFRKVLAAGLEMLRESSYADLTVRAVAARAKV 56 Query: 61 SPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEVXX 120 +PATAYTYFSSKNHLIAE+YL L+ KV +FTDVN + RV + LR +AL++ADEPEV Sbjct: 57 APATAYTYFSSKNHLIAEIYLSLITKVDYFTDVNDSTAVRVEKTLRSMALMIADEPEV-A 115 Query: 121 XXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSG 180 D AVR VR++IGAEIHRRI +A+GP P T+AALEM FFGALV+AGSG Sbjct: 116 AACTTALLSGNDAAVRTVRERIGAEIHRRIRAAVGPDPDPRTLAALEMTFFGALVNAGSG 175 Query: 181 EFTYHEVADRLADVAVLIL 199 FTYH++ADRL+ V LI+ Sbjct: 176 AFTYHQIADRLSYVVGLIV 194 >tr|A4T7M5|A4T7M5_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium gilvum] Length = 198 Score = 200 bits (508), Expect = 1e-49 Identities = 112/199 (56%), Positives = 139/199 (69%), Gaps = 5/199 (2%) Query: 1 VSSDALVTVTDQQQHESGDXXXXXXXXXXXXXVLAAGMDTLRASSYPDLTVRMVAARAGV 60 +SSDA+ +T ESG VLAAG++ LR SSY DLTVR VAARA V Sbjct: 1 MSSDAVAALTP----ESGHPPRNRRQEETFRKVLAAGLEMLRESSYADLTVRAVAARAKV 56 Query: 61 SPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHLALVVADEPEVXX 120 +PATAYTYFSSKNHLIAE+YL+L+++V +FTDVN + RV + LR +AL+VADEPEV Sbjct: 57 APATAYTYFSSKNHLIAEIYLNLMQQVDYFTDVNDSTVTRVEKTLRSMALMVADEPEV-A 115 Query: 121 XXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEMAFFGALVHAGSG 180 D VR+VR++IG EIHRRI +A+GP P T+AALEM FFGALV+AGSG Sbjct: 116 AACTTALLSGNDATVRSVRERIGGEIHRRIRAAVGPDPDPRTLAALEMTFFGALVNAGSG 175 Query: 181 EFTYHEVADRLADVAVLIL 199 FTYH++ADRL+ V LI+ Sbjct: 176 AFTYHQIADRLSYVVGLIV 194 >tr|B1MKL3|B1MKL3_MYCA9 Tax_Id=561007 SubName: Full=Putative transcriptional regulator, TetR family;[Mycobacterium abscessus] Length = 195 Score = 192 bits (488), Expect = 2e-47 Identities = 98/167 (58%), Positives = 123/167 (73%), Gaps = 1/167 (0%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTD 92 ++ AG + L ++Y D+T+R VAARA V+PATAYTYFSSK+HL+AE+YLDL+ + P+FTD Sbjct: 26 IVTAGREMLGETTYADMTIRGVAARAKVAPATAYTYFSSKSHLVAEIYLDLIHEAPYFTD 85 Query: 93 VNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIAS 152 VN RV + LR LALVVADEPE+ D AVRAVRD+IG EIHRRI S Sbjct: 86 VNDTQAARVTKTLRSLALVVADEPEI-ATGCTTALLSNNDEAVRAVRDKIGLEIHRRIRS 144 Query: 153 AIGPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 A+GP A P ++ALEM FFGAL+HAGSG FTYH++AD+L V L+L Sbjct: 145 AMGPDADPRVVSALEMTFFGALMHAGSGTFTYHQIADKLTFVVDLML 191 >tr|B2HSR1|B2HSR1_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 215 Score = 143 bits (361), Expect = 1e-32 Identities = 85/173 (49%), Positives = 114/173 (65%), Gaps = 5/173 (2%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTD 92 VL AG+D LRA+S+ +LT+R VAARAGVSPA+AYTYF SK+ L+A VYL L+R +P TD Sbjct: 48 VLEAGLDELRATSFANLTMRAVAARAGVSPASAYTYFPSKSALVAAVYLRLLRDLPLHTD 107 Query: 93 VNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIAS 152 VN + RV +R +A+VVADEPE+ DPAV+ +R QIG E+ RRI + Sbjct: 108 VNDTTKTRVSATMRDMAMVVADEPEL--TAACGTALMADDPAVQPLRAQIGEEVARRIGA 165 Query: 153 AIGPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLILVGAGQA 205 A+GPG + L+M F GAL+ A +Y E+A +L D AV +++GA A Sbjct: 166 ALGPGWPRSVKSTLQMTFSGALMTARF--LSYEEIAGQL-DEAVNLILGAAVA 215 >tr|Q73ZX2|Q73ZX2_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 198 Score = 139 bits (350), Expect = 2e-31 Identities = 84/174 (48%), Positives = 112/174 (64%), Gaps = 5/174 (2%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTD 92 VL AG+ LR SSY LT+R VA RAGVSPA+AYTYF SK+ L+A VYL +R +P TD Sbjct: 30 VLDAGLQELRESSYAGLTMRAVATRAGVSPASAYTYFPSKSALVAAVYLRFLRDLPVHTD 89 Query: 93 VNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIAS 152 VN + RV LR +A+VVADEPE+ DPAV+ +R+QIG E+ RRIA+ Sbjct: 90 VNETAQRRVSATLRDMAVVVADEPEL--TAACGAALMADDPAVKPLREQIGEEVSRRIAA 147 Query: 153 AIGPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLILVGAGQAA 206 A+GPG + L+M F GAL+ A F E++ +L D AV +++GA +A+ Sbjct: 148 ALGPGWPRAVKSTLQMTFSGALMTARFVSFA--EISGQL-DEAVDLILGAARAS 198 >tr|A0QGV6|A0QGV6_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional regulator, TetR family protein;[Mycobacterium avium] Length = 201 Score = 139 bits (350), Expect = 2e-31 Identities = 84/174 (48%), Positives = 112/174 (64%), Gaps = 5/174 (2%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTD 92 VL AG+ LR SSY LT+R VA RAGVSPA+AYTYF SK+ L+A VYL +R +P TD Sbjct: 33 VLDAGLQELRESSYAGLTMRAVATRAGVSPASAYTYFPSKSALVAAVYLRFLRDLPVHTD 92 Query: 93 VNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIAS 152 VN + RV LR +A+VVADEPE+ DPAV+ +R+QIG E+ RRIA+ Sbjct: 93 VNETAQRRVSATLRDMAVVVADEPEL--TAACGAALMADDPAVKPLREQIGEEVSRRIAA 150 Query: 153 AIGPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLILVGAGQAA 206 A+GPG + L+M F GAL+ A F E++ +L D AV +++GA +A+ Sbjct: 151 ALGPGWPRAVKSTLQMTFSGALMTARFVSFA--EISGQL-DEAVDLILGAARAS 201 >tr|A0PSN2|A0PSN2_MYCUA Tax_Id=362242 SubName: Full=Putative uncharacterized protein;[Mycobacterium ulcerans] Length = 163 Score = 138 bits (348), Expect = 4e-31 Identities = 82/168 (48%), Positives = 110/168 (65%), Gaps = 5/168 (2%) Query: 38 MDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAM 97 MD LRA+S+ +LT+R VAARAGVSPA+AYTYF SK+ L+A VYL L+R +P TDVN Sbjct: 1 MDELRATSFANLTMRAVAARAGVSPASAYTYFPSKSALVAAVYLRLLRDLPLHTDVNDTT 60 Query: 98 RDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPG 157 + RV +R +A+VVADEPE+ DPAV+ +R QIG E+ RRI +A+GPG Sbjct: 61 KTRVSATMRDMAMVVADEPEL--TAACGTALMADDPAVQPLRTQIGEEVARRIGAALGPG 118 Query: 158 AQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLILVGAGQA 205 + L+M F GAL+ A +Y E+A +L D AV +++GA A Sbjct: 119 WPRSVKSTLQMTFSGALMTARF--LSYEEIAGQL-DEAVNLILGAAVA 163 >tr|C1BBG1|C1BBG1_RHOOB Tax_Id=632772 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus opacus] Length = 190 Score = 129 bits (324), Expect = 2e-28 Identities = 76/164 (46%), Positives = 97/164 (59%), Gaps = 2/164 (1%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A ++ LR + LTVR VA AGV+PATAYTYFSSK HL+AEV+ + P D + Sbjct: 28 AAVEVLREEGFAGLTVRSVAGIAGVAPATAYTYFSSKEHLVAEVFWRRLAASPQPADEGL 87 Query: 96 AMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIG 155 RVV LRH+AL+VADEPE+ DP V +R +IG EI R+A+A+G Sbjct: 88 DRTGRVVAVLRHIALLVADEPEL--AGAVTNALLGRDPDVEHLRARIGLEIRDRLATALG 145 Query: 156 PGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 G P + ALE+ + G LV AG G +Y + ADRL A LIL Sbjct: 146 EGHDPDVLEALELLYAGGLVRAGMGYGSYAQFADRLETSAKLIL 189 >tr|Q0S7N2|Q0S7N2_RHOSR Tax_Id=101510 SubName: Full=Possible transcriptional regulator, TetR family protein;[Rhodococcus sp.] Length = 186 Score = 128 bits (322), Expect = 4e-28 Identities = 76/164 (46%), Positives = 97/164 (59%), Gaps = 2/164 (1%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A ++ LR + LTVR VA AGV+PATAYTYFSSK HL+AEV+ + P D + Sbjct: 24 AAVEVLREEGFAGLTVRSVAGIAGVAPATAYTYFSSKEHLVAEVFWRRLAGSPQPADDGL 83 Query: 96 AMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIG 155 RVV LRH+AL+VADEPE+ DP V +R +IG EI R+A+A+G Sbjct: 84 DRTGRVVAVLRHIALLVADEPEL--AGAVTNALLGRDPDVEHLRARIGLEIRDRLATALG 141 Query: 156 PGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 G P + ALE+ + G LV AG G +Y + ADRL A LIL Sbjct: 142 EGHDPDVLEALELLYAGGLVRAGMGYGSYAQFADRLETSAKLIL 185 >tr|C1A0D4|C1A0D4_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus erythropolis] Length = 200 Score = 127 bits (319), Expect = 9e-28 Identities = 73/167 (43%), Positives = 98/167 (58%), Gaps = 2/167 (1%) Query: 35 AAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVN 94 AA + LR + DLTVRMVAA AGV+ ATAYTYFSSK+HL+AE++ + VP Sbjct: 31 AAAITVLRDKGFADLTVRMVAAEAGVAAATAYTYFSSKSHLVAELFWRRLDAVPHEPSPE 90 Query: 95 VAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAI 154 +V LR +AL+V+DEPE+ DP V +R +IG I R+ A+ Sbjct: 91 AEREAQVCSVLRSVALLVSDEPEL--AAAVTTAMMGNDPDVEHLRGRIGKNIRERLIEAL 148 Query: 155 GPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLILVG 201 GP P + ALE+++ GALV AG G +Y ++ADRL A LI+ G Sbjct: 149 GPSYDPDVLEALEISWSGALVRAGMGYESYSQIADRLEVTARLIMAG 195 >tr|C3JQJ0|C3JQJ0_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, TetR family protein;[Rhodococcus erythropolis SK121] Length = 196 Score = 127 bits (319), Expect = 9e-28 Identities = 73/167 (43%), Positives = 98/167 (58%), Gaps = 2/167 (1%) Query: 35 AAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVN 94 AA + LR + DLTVRMVAA AGV+ ATAYTYFSSK+HL+AE++ + VP Sbjct: 27 AAAITVLRDKGFADLTVRMVAAEAGVAAATAYTYFSSKSHLVAELFWRRLDAVPHEPSPE 86 Query: 95 VAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAI 154 +V LR +AL+V+DEPE+ DP V +R +IG I R+ A+ Sbjct: 87 AEREAQVCSVLRSVALLVSDEPEL--AAAVTTAMMGNDPDVEHLRGRIGKNIRERLIEAL 144 Query: 155 GPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLILVG 201 GP P + ALE+++ GALV AG G +Y ++ADRL A LI+ G Sbjct: 145 GPSYDPDVLEALEISWSGALVRAGMGYESYSQIADRLEVTARLIMAG 191 >tr|C1A0F3|C1A0F3_RHOE4 Tax_Id=234621 SubName: Full=Putative TetR family transcriptional regulator;[Rhodococcus erythropolis] Length = 201 Score = 122 bits (307), Expect = 2e-26 Identities = 72/164 (43%), Positives = 97/164 (59%), Gaps = 2/164 (1%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A + LR + LTVR VAA AGV ATAYTYF+SK HL+AEV+ ++ + Sbjct: 37 ATVKVLRKQEFSGLTVRSVAAEAGVGTATAYTYFASKEHLVAEVFWRRLQNSSAPDGSGL 96 Query: 96 AMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIG 155 V+ LR++AL++ADEPEV DP V +R +IG EIH+R+ASA+ Sbjct: 97 DRTAHVLSVLRNIALLLADEPEVSAAVTNALLGS--DPEVEHLRGRIGLEIHQRLASALD 154 Query: 156 PGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 P +P + ALEM + GAL+ AG G TY ++A RL A+LIL Sbjct: 155 PNGEPEVLEALEMLYAGALLRAGIGYGTYAQIAGRLEASALLIL 198 >tr|C3JQH1|C3JQH1_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, TetR family protein;[Rhodococcus erythropolis SK121] Length = 171 Score = 122 bits (307), Expect = 2e-26 Identities = 72/164 (43%), Positives = 97/164 (59%), Gaps = 2/164 (1%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A + LR + LTVR VAA AGV ATAYTYF+SK HL+AEV+ ++ + Sbjct: 7 ATVKVLRKQEFSGLTVRSVAAEAGVGTATAYTYFASKEHLVAEVFWRRLQNSSAPDGSGL 66 Query: 96 AMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIG 155 V+ LR++AL++ADEPEV DP V +R +IG EIH+R+ASA+ Sbjct: 67 DRTAHVLSVLRNIALLLADEPEVSAAVTNALLGS--DPEVEHLRGRIGLEIHQRLASALD 124 Query: 156 PGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 P +P + ALEM + GAL+ AG G TY ++A RL A+LIL Sbjct: 125 PNGEPEVLEALEMLYAGALLRAGIGYGTYAQIAGRLEASALLIL 168 >tr|Q5YWM0|Q5YWM0_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 159 Score = 122 bits (305), Expect = 4e-26 Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 2/159 (1%) Query: 41 LRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDR 100 L Y +T+RMVAA AGV ATAYTYFSSK HL+AE++ +R P R Sbjct: 2 LAREGYAGMTIRMVAAAAGVGAATAYTYFSSKEHLVAEIFWRRLRAAPVPATAGSDRTAR 61 Query: 101 VVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQP 160 V+ LR +AL+VADEPE+ DP V+ +R +IG EI RI++A+ P P Sbjct: 62 VIAELRTIALLVADEPEL--SGAVTGALLGRDPDVQHLRTRIGVEIRGRISAALAPDPDP 119 Query: 161 GTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 I +LE+ + GAL+ AG G +Y ++ADR+ A+L+L Sbjct: 120 EIIESLELIYAGALMRAGMGHESYADIADRIVRSAMLVL 158 >tr|Q5YQN2|Q5YQN2_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 192 Score = 120 bits (301), Expect = 1e-25 Identities = 68/164 (41%), Positives = 98/164 (59%), Gaps = 2/164 (1%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A ++ L + +T+R+VAA AGV ATAYTYFSSK HL+AE++ + P + Sbjct: 30 AAVEVLSREGFAGMTIRLVAAAAGVGTATAYTYFSSKEHLVAEIFWRRLVASPSPASDSD 89 Query: 96 AMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIG 155 RV+ LR++AL+VADE E+ DP V +RD+IGAEI +RI A+G Sbjct: 90 DPVARVIAELRNIALLVADEQELSGAVTSALLGR--DPDVAHLRDRIGAEIRKRILRALG 147 Query: 156 PGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 P P + +LE+ + GALV AG G +Y ++ADR+ A++IL Sbjct: 148 PDPDPDVVESLELLYAGALVRAGMGYGSYSQIADRIEKSALMIL 191 >tr|Q1B1N5|Q1B1N5_MYCSS Tax_Id=164756 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 189 Score = 116 bits (290), Expect = 2e-24 Identities = 70/164 (42%), Positives = 91/164 (55%), Gaps = 2/164 (1%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A +D L + LTVR VAA AGV ATAYTYFSSK HL+AEV+ + P V+ Sbjct: 27 AAVDILNRDGFSGLTVRRVAAEAGVGAATAYTYFSSKEHLVAEVFWRRLSAAPPAAHVSD 86 Query: 96 AMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIG 155 RVV+ LR +AL+VADEPE DP V +R +IG ++ R+ A+G Sbjct: 87 DPAARVVEVLRDIALLVADEPE--FAGAVTNALLGKDPDVEVLRQRIGRDVRDRLVDALG 144 Query: 156 PGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 P I ALE+ + GALV AG G +Y ++ RL A L+L Sbjct: 145 PPVDFDVIEALELLYVGALVWAGMGYSSYDDMTQRLERSARLLL 188 >tr|A3Q7W0|A3Q7W0_MYCSJ Tax_Id=164757 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 189 Score = 116 bits (290), Expect = 2e-24 Identities = 70/164 (42%), Positives = 91/164 (55%), Gaps = 2/164 (1%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A +D L + LTVR VAA AGV ATAYTYFSSK HL+AEV+ + P V+ Sbjct: 27 AAVDILNRDGFSGLTVRRVAAEAGVGAATAYTYFSSKEHLVAEVFWRRLSAAPPAAHVSD 86 Query: 96 AMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIG 155 RVV+ LR +AL+VADEPE DP V +R +IG ++ R+ A+G Sbjct: 87 DPAARVVEVLRDIALLVADEPE--FAGAVTNALLGKDPDVEVLRQRIGRDVRDRLVDALG 144 Query: 156 PGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 P I ALE+ + GALV AG G +Y ++ RL A L+L Sbjct: 145 PPVDFDVIEALELLYVGALVWAGMGYSSYDDMTQRLERSARLLL 188 >tr|A1UNG4|A1UNG4_MYCSK Tax_Id=189918 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 189 Score = 116 bits (290), Expect = 2e-24 Identities = 70/164 (42%), Positives = 91/164 (55%), Gaps = 2/164 (1%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A +D L + LTVR VAA AGV ATAYTYFSSK HL+AEV+ + P V+ Sbjct: 27 AAVDILNRDGFSGLTVRRVAAEAGVGAATAYTYFSSKEHLVAEVFWRRLSAAPPAAHVSD 86 Query: 96 AMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIG 155 RVV+ LR +AL+VADEPE DP V +R +IG ++ R+ A+G Sbjct: 87 DPAARVVEVLRDIALLVADEPE--FAGAVTNALLGKDPDVEVLRQRIGRDVRDRLVDALG 144 Query: 156 PGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 P I ALE+ + GALV AG G +Y ++ RL A L+L Sbjct: 145 PPVDFDVIEALELLYVGALVWAGMGYSSYDDMTQRLERSARLLL 188 >tr|A0R6A5|A0R6A5_MYCS2 Tax_Id=246196 SubName: Full=Putative transcriptional regulator;[Mycobacterium smegmatis] Length = 189 Score = 115 bits (287), Expect = 5e-24 Identities = 68/164 (41%), Positives = 93/164 (56%), Gaps = 2/164 (1%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A ++ + Y LTVR VAA AGV ATAYTYFSSK HL+AEV+ + P + Sbjct: 27 AAVELISREGYAGLTVRRVAAEAGVGSATAYTYFSSKEHLVAEVFWRRLSAAPPAVHESP 86 Query: 96 AMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIG 155 RVV+ L+H+A +VADEP DP V A+R +IGA+I +R+ +A+G Sbjct: 87 DPATRVVEVLQHIASLVADEP--AFAGAVTTALLGKDPDVDALRQRIGADIRQRLVAALG 144 Query: 156 PGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 P + I ALE+ + G +V AG G +Y +V RL A L+L Sbjct: 145 PDVRIDVIEALELLYTGTMVWAGMGYDSYEQVVRRLEKSARLVL 188 >tr|A1TH29|A1TH29_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium vanbaalenii] Length = 189 Score = 114 bits (286), Expect = 6e-24 Identities = 73/167 (43%), Positives = 96/167 (57%), Gaps = 8/167 (4%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A ++ LR + LTVR VAA AGV ATAYTYFSSK HL+AEV+ R++ V+ Sbjct: 27 AAVELLRRDGFAALTVRRVAAEAGVGAATAYTYFSSKEHLVAEVFW---RRLAGSQRVDH 83 Query: 96 AMRD---RVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIAS 152 D RVV+ L H++L+VA EPE DP V +R +IG +I R++ Sbjct: 84 GSGDPASRVVEVLGHISLLVAGEPEFAGAVTTALLGK--DPDVEVLRLRIGRDIRDRLSD 141 Query: 153 AIGPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 A+GP P I ALEM + GALV AG G +Y E+A +L A L+L Sbjct: 142 ALGPDTDPDVIDALEMLYSGALVRAGMGYTSYPEIAAKLEKAARLML 188 >tr|D0L394|D0L394_GORB4 Tax_Id=526226 SubName: Full=Regulatory protein TetR;[Gordonia bronchialis] Length = 193 Score = 108 bits (269), Expect = 6e-22 Identities = 68/166 (40%), Positives = 93/166 (56%), Gaps = 4/166 (2%) Query: 36 AGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNV 95 A +D L + LTVR VA AGV+PATAYTYFSSK+HL+AEV+ + D Sbjct: 28 AAVDILNQDGFDGLTVRSVAKLAGVAPATAYTYFSSKSHLVAEVFWRRLSAGVSDPDPQA 87 Query: 96 AMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIG 155 +RV Q LR +++VVA E ++ DP V +R +IG I RR+A A+ Sbjct: 88 THTERVAQVLREVSMVVAGEGQL--GGAVTMALLGTDPDVEHLRLRIGGFIRRRLAQALE 145 Query: 156 PGAQ-PGTIA-ALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 + PG + ALEM + G LVHAG G TY + ++RL A L++ Sbjct: 146 TDPEHPGPLLDALEMIYAGGLVHAGMGHMTYEQTSERLVAAAHLLM 191 >tr|A3PX85|A3PX85_MYCSJ Tax_Id=164757 SubName: Full=Putative transcriptional regulator, TetR family;[Mycobacterium sp.] Length = 194 Score = 100 bits (249), Expect = 1e-19 Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 1/153 (0%) Query: 49 LTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTDVNVAMRDRVVQALRHL 108 L++ +AARA ++PA F S + ++AE+YL V +P D A+ RV LR + Sbjct: 42 LSMPALAARARLAPAAVNARFPSVDAVLAELYLHRVSALPLTVDTGAAVAARVSGQLRAV 101 Query: 109 ALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIASAIGPGAQPGTIAALEM 168 LV+ADEP + DPAV RD+IGAE+ RRIA+A+G GA P A LE Sbjct: 102 TLVMADEPTLAAACSRALLCSD-DPAVLTARDRIGAEVQRRIAAALGTGAWPEVQATLET 160 Query: 169 AFFGALVHAGSGEFTYHEVADRLADVAVLILVG 201 F+GAL+ S Y ++A RL + LIL G Sbjct: 161 VFWGALLQVQSRHIDYRDMAGRLDTMLSLILPG 193 >tr|A1TDW0|A1TDW0_MYCVP Tax_Id=350058 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium vanbaalenii] Length = 195 Score = 83.2 bits (204), Expect = 2e-14 Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 2/167 (1%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTD 92 VL A L ++ DLT R +A AGV+ YF S ++AE+YL L+R P D Sbjct: 27 VLDATAALLCEFTFDDLTTRRIAEAAGVTHGDLCVYFRSTEAIVAEIYLGLLRDAPLTVD 86 Query: 93 VNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIAS 152 + + + RV L ++ AD P + + + A+R +I AE+HRR+ + Sbjct: 87 IEQSAQARVAALFNQLVMLPADHPGL--AAACSRALISQEMSAHAIRRRIHAELHRRVCA 144 Query: 153 AIGPGAQPGTIAALEMAFFGALVHAGSGEFTYHEVADRLADVAVLIL 199 + A P LE GA+V A +G T+ A LA V +L Sbjct: 145 VLRSEAWPEVTETLEFGLVGAMVQASAGITTFEATAGELACVVARLL 191 >tr|A4IN44|A4IN44_GEOTN Tax_Id=420246 SubName: Full=Transcriptional regulator TetR family;[Geobacillus thermodenitrificans] Length = 195 Score = 48.5 bits (114), Expect = 5e-04 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%) Query: 38 MDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLD-LVRKV 87 ++ LR S +T++M+A +A VSP T Y YF SK HL+ E +D ++R+V Sbjct: 20 LELLRTSDPRGMTIQMIAKQANVSPVTIYNYFGSKEHLVRETLIDYMIRQV 70 >tr|D1AE68|D1AE68_THECU Tax_Id=471852 SubName: Full=Transcriptional regulator, TetR family;[Thermomonospora curvata DSM 43183] Length = 208 Score = 48.5 bits (114), Expect = 5e-04 Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 7/182 (3%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFT- 91 ++ A + Y +T+ VA RAGV+ AT Y YF++K+HL+ EV +V T Sbjct: 24 LIDAARELALQGGYHAVTMHDVADRAGVARATVYRYFATKDHLLTEVAAVWAHEVTGDTV 83 Query: 92 --DVNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRR 149 V +R+ L + V A + DP+V R ++ I R Sbjct: 84 ALAVGETPAERLTALLGRIVEVAAANRTL--TSAIVQAVTSEDPSVEDARTELFLLIRDR 141 Query: 150 IASAIGPGAQPGTIAALEM--AFFGALVHAGSGEFTYHEVADRLADVAVLILVGAGQAAP 207 +A AIG T + + AL+ S EV D + A L++ G Sbjct: 142 LAQAIGAPVPERTDIEIVLGHVLLAALISLTSLSRPMEEVRDMVTTAARLVMAGVVPLPQ 201 Query: 208 GD 209 G+ Sbjct: 202 GE 203 >tr|B4BKA5|B4BKA5_9BACI Tax_Id=495036 SubName: Full=Transcriptional regulator, TetR family;[Geobacillus sp. G11MC16] Length = 195 Score = 48.5 bits (114), Expect = 5e-04 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%) Query: 38 MDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLD-LVRKV 87 ++ LR S +T++M+A +A VSP T Y YF SK HL+ E +D ++R+V Sbjct: 20 LELLRTSDPRGMTIQMIAKQANVSPVTIYNYFGSKEHLVRETLIDYMIRQV 70 >tr|C7MT69|C7MT69_SACVD Tax_Id=471857 SubName: Full=Transcriptional regulator, TetR family;[Saccharomonospora viridis] Length = 213 Score = 47.0 bits (110), Expect = 0.002 Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 13/175 (7%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKVPFFTD 92 +L+A + +V + AGV+ Y YF SK+ L+ E+Y ++R+ + Sbjct: 31 LLSAATRLFAEHGFDRTSVSQIVEAAGVTKGAMYHYFRSKDDLLYEIYARVLREQTRRLE 90 Query: 93 VNVAMRDRVVQALRHLA--LVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRI 150 A V + L +A +VV+ + DP +R H R Sbjct: 91 ALAASGGPVAKRLHSIASDVVVSTIANLDDATIFFQSLHQLDPVMRKTVRAERRRYHERF 150 Query: 151 ASAIGPGAQPGTIAALEMA------FFGALVHAG-----SGEFTYHEVADRLADV 194 I G + G A + A FFGA+ H SGE + +V D AD+ Sbjct: 151 RGLIEEGQRTGEFRADKPAEIIVDFFFGAVHHLAYWYRPSGELSAQQVGDHFADL 205 >tr|Q828P9|Q828P9_STRAW Tax_Id=33903 SubName: Full=Putative TetR-family transcriptional regulator;[Streptomyces avermitilis] Length = 200 Score = 46.6 bits (109), Expect = 0.002 Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 21/184 (11%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVR----KVP 88 +LAA Y +V+ + AGV+ Y YF SK+ L+ EVY ++R ++ Sbjct: 19 LLAAATRLFADRGYDRTSVQEIVEAAGVTKGALYHYFGSKDDLLHEVYARVLRVQQERLD 78 Query: 89 FFTDVNVAMRDRVVQALRHLALVVAD--EPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEI 146 F D + + +R+ A + + D + + + VRA R Sbjct: 79 AFADADAPIEERLRAAAADVVVTTIDNLDDAMIFFRSMHHLSPEKNKQVRAER----RRY 134 Query: 147 HRRIASAIGPGAQPGTIAALEMA------FFGALVHAGS-----GEFTYHEVADRLADVA 195 H R + I G + G + A FG++ H + G T +VAD+LAD+ Sbjct: 135 HERFRALIEEGQKEGVFSTRTPADLVVDYHFGSVHHLSTWYRPGGPLTPQQVADQLADLL 194 Query: 196 VLIL 199 + L Sbjct: 195 LRAL 198 >tr|A4T9Y1|A4T9Y1_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, TetR family;[Mycobacterium gilvum] Length = 195 Score = 46.6 bits (109), Expect = 0.002 Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 15/174 (8%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKV-PFFT 91 +L A + A Y + VAARA V +T Y ++ K LIA+ L R+ P Sbjct: 22 ILRAALAEFAAHGYTGFRMESVAARAEVGRSTVYRHWPDKGALIADALAGLSRQPDPAHE 81 Query: 92 DVNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHRRIA 151 D R R L HLA + D P V D A R + A+ +R+ Sbjct: 82 DSAATARRRAHILLNHLAQALTDSP-VSACVPALIHAAANDDAFRDRLHRFSAQRRQRLT 140 Query: 152 SAIGPGAQPGTI----------AALEMA-FFGALVHAGSGEFTYHEVADRLADV 194 + I G G AAL A F+ AL+ A + + + VAD L +V Sbjct: 141 ATIAEGVASGEFPPTVDPEIASAALSGAVFYRALMTADAPDTDF--VADLLDEV 192 >tr|Q87TM9|Q87TM9_VIBPA Tax_Id=670 SubName: Full=Transcriptional regulator, TetR family;[Vibrio parahaemolyticus] Length = 193 Score = 45.1 bits (105), Expect = 0.006 Identities = 20/55 (36%), Positives = 34/55 (61%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKV 87 +LAA + S + L+++ +A AGV+ T Y YFS K HL+ EV L++ +++ Sbjct: 13 ILAAAEQLIAESGFQGLSMQKLANEAGVAAGTIYRYFSDKEHLLEEVRLNVAKRI 67 >tr|Q1QIK6|Q1QIK6_NITHX Tax_Id=323097 SubName: Full=Transcriptional regulator, TetR family;[Nitrobacter hamburgensis] Length = 227 Score = 45.1 bits (105), Expect = 0.006 Identities = 45/169 (26%), Positives = 67/169 (39%), Gaps = 7/169 (4%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVR----KVP 88 +LAA DT S + + VA RA V+ T Y YF SK LI+E+ +++ R + Sbjct: 20 ILAAARDTASNSGMAAVQIAPVALRANVAAGTVYRYFPSKADLISELIMEVARDELAAIR 79 Query: 89 FFTDVNVAMRDRVVQALRHLALVVADEPEVXXXXXXXXXXXXXDPAVRAVRDQIGAEIHR 148 D + A+ +A+ + ++ A R I EI Sbjct: 80 AAADAAPGPSSALAAAVATVAVHMVSHRKLAWGILAEPVDVDVAATRLASRRDIAGEIET 139 Query: 149 RIASAIGPGAQPGTIAAL-EMAFFGALVHAGSGEFTYHEVAD--RLADV 194 RI +A+ G P +L A GAL + G + D RL DV Sbjct: 140 RIIAAVRAGHLPAQDTSLAATALLGALNESLVGPLAPDNLDDPARLRDV 188 >tr|C7NHU0|C7NHU0_KYTSD Tax_Id=478801 SubName: Full=Transcriptional regulator, TetR family;[Kytococcus sedentarius] Length = 227 Score = 45.1 bits (105), Expect = 0.006 Identities = 21/51 (41%), Positives = 29/51 (56%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDL 83 VL + R Y T+R +A AG+SP+ AY YFS K+ L+ E+Y L Sbjct: 12 VLDTALRLFRQEGYAATTMRRIATEAGLSPSNAYYYFSGKDELVQELYRQL 62 >tr|A6B4T4|A6B4T4_VIBPA Tax_Id=419109 SubName: Full=Transcriptional regulator, TetR family;[Vibrio parahaemolyticus AQ3810] Length = 204 Score = 45.1 bits (105), Expect = 0.006 Identities = 20/55 (36%), Positives = 34/55 (61%) Query: 33 VLAAGMDTLRASSYPDLTVRMVAARAGVSPATAYTYFSSKNHLIAEVYLDLVRKV 87 +LAA + S + L+++ +A AGV+ T Y YFS K HL+ EV L++ +++ Sbjct: 24 ILAAAEQLIAESGFQGLSMQKLANEAGVAAGTIYRYFSDKEHLLEEVRLNVAKRI 78 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.132 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 1,343,151,938 Number of extensions: 47388236 Number of successful extensions: 143379 Number of sequences better than 10.0: 1116 Number of HSP's gapped: 144256 Number of HSP's successfully gapped: 1116 Length of query: 222 Length of database: 3,846,993,858 Length adjustment: 132 Effective length of query: 90 Effective length of database: 2,358,667,062 Effective search space: 212280035580 Effective search space used: 212280035580 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 78 (34.7 bits)