BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_4966 (511 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HHX0|B2HHX0_MYCMM Tax_Id=216594 (cpsA)SubName: Full=Conserv... 897 0.0 tr|A0PUS6|A0PUS6_MYCUA Tax_Id=362242 (cpsA)SubName: Full=Conserv... 852 0.0 tr|Q7TWE7|Q7TWE7_MYCBO Tax_Id=1765 (cpsA)SubName: Full=POSSIBLE ... 724 0.0 tr|O06347|O06347_MYCTU Tax_Id=1773 (cpsA)SubName: Full=POSSIBLE ... 724 0.0 tr|C6DM03|C6DM03_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 724 0.0 tr|C1AHU1|C1AHU1_MYCBT Tax_Id=561275 (cpsA)SubName: Full=Putativ... 724 0.0 tr|A5U8F9|A5U8F9_MYCTA Tax_Id=419947 (cpsA)SubName: Full=Putativ... 724 0.0 tr|A1KPG9|A1KPG9_MYCBP Tax_Id=410289 (cpsA)SubName: Full=Possibl... 724 0.0 tr|Q7D5G2|Q7D5G2_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 724 0.0 tr|A5WT55|A5WT55_MYCTF Tax_Id=336982 SubName: Full=Putative unch... 724 0.0 tr|A4KTF3|A4KTF3_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 724 0.0 tr|A2VPQ7|A2VPQ7_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 724 0.0 tr|Q743K6|Q743K6_MYCPA Tax_Id=1770 (cpsA)SubName: Full=CpsA;[Myc... 697 0.0 tr|A0QAL4|A0QAL4_MYCA1 Tax_Id=243243 SubName: Full=Cell envelope... 697 0.0 tr|Q50160|Q50160_MYCLE Tax_Id=1769 (cpsA)SubName: Full=Putative ... 645 0.0 tr|B8ZSW7|B8ZSW7_MYCLB Tax_Id=561304 (cpsA)SubName: Full=Putativ... 645 0.0 tr|B1MGX4|B1MGX4_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 479 e-133 tr|C2AS67|C2AS67_TSUPA Tax_Id=521096 SubName: Full=Cell envelope... 357 3e-96 tr|C0ZNS0|C0ZNS0_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR... 321 2e-85 tr|C3JHK0|C3JHK0_RHOER Tax_Id=596309 SubName: Full=Transcription... 318 1e-84 tr|B4V4U7|B4V4U7_9ACTO Tax_Id=465541 SubName: Full=CpsA;[Strepto... 286 6e-75 tr|C7Q6T6|C7Q6T6_CATAD Tax_Id=479433 SubName: Full=Cell envelope... 280 2e-73 tr|A0QNN5|A0QNN5_MYCS2 Tax_Id=246196 SubName: Full=Cell envelope... 269 6e-70 tr|C7MWA0|C7MWA0_SACVD Tax_Id=471857 SubName: Full=Cell envelope... 258 1e-66 tr|C6WNS4|C6WNS4_ACTMD Tax_Id=446462 SubName: Full=Cell envelope... 251 2e-64 tr|A4FDR6|A4FDR6_SACEN Tax_Id=405948 SubName: Full=Transcription... 249 8e-64 tr|Q73U03|Q73U03_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 243 6e-62 tr|A0QMX7|A0QMX7_MYCA1 Tax_Id=243243 SubName: Full=Cell envelope... 241 1e-61 tr|C7MUW6|C7MUW6_SACVD Tax_Id=471857 SubName: Full=Cell envelope... 241 2e-61 tr|C6WRJ9|C6WRJ9_ACTMD Tax_Id=446462 SubName: Full=Cell envelope... 238 1e-60 tr|C7Q249|C7Q249_CATAD Tax_Id=479433 SubName: Full=Cell envelope... 234 2e-59 tr|Q6ACU9|Q6ACU9_LEIXX Tax_Id=59736 (lytR)SubName: Full=Transcri... 227 2e-57 tr|C7QEE1|C7QEE1_CATAD Tax_Id=479433 SubName: Full=Cell envelope... 227 2e-57 tr|Q5YQQ1|Q5YQQ1_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 226 5e-57 tr|C6WJ74|C6WJ74_ACTMD Tax_Id=446462 SubName: Full=Cell envelope... 219 5e-55 tr|B1MET0|B1MET0_MYCA9 Tax_Id=561007 SubName: Full=Putative unch... 219 9e-55 tr|C3JG80|C3JG80_RHOER Tax_Id=596309 SubName: Full=Transcription... 218 1e-54 tr|Q7TWU9|Q7TWU9_MYCBO Tax_Id=1765 SubName: Full=Putative unchar... 218 2e-54 tr|P96872|P96872_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 218 2e-54 tr|C6DL04|C6DL04_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 218 2e-54 tr|C1AH41|C1AH41_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 218 2e-54 tr|A5U7U1|A5U7U1_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 218 2e-54 tr|A1KNR9|A1KNR9_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 218 2e-54 tr|Q7D5T0|Q7D5T0_MYCTU Tax_Id=1773 SubName: Full=Putative unchar... 218 2e-54 tr|A5WSI2|A5WSI2_MYCTF Tax_Id=336982 SubName: Full=Conserved CPS... 218 2e-54 tr|A4KLG3|A4KLG3_MYCTU Tax_Id=395095 SubName: Full=Putative unch... 218 2e-54 tr|A2VP63|A2VP63_MYCTU Tax_Id=348776 SubName: Full=Putative unch... 218 2e-54 tr|Q8NSD6|Q8NSD6_CORGL Tax_Id=1718 SubName: Full=Transcriptional... 217 3e-54 tr|Q8FRK7|Q8FRK7_COREF Tax_Id=152794 SubName: Full=Putative unch... 217 3e-54 tr|C0ZWW9|C0ZWW9_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR... 217 3e-54 >tr|B2HHX0|B2HHX0_MYCMM Tax_Id=216594 (cpsA)SubName: Full=Conserved hypothetical membrane protein CpsA;[Mycobacterium marinum] Length = 511 Score = 897 bits (2319), Expect = 0.0 Identities = 456/511 (89%), Positives = 456/511 (89%) Query: 1 MGRTKARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAE 60 MGRTKARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAE Sbjct: 1 MGRTKARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAE 60 Query: 61 DPRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK 120 DPRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK Sbjct: 61 DPRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK 120 Query: 121 VVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXX 180 VVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGRE Sbjct: 121 VVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREAGR 180 Query: 181 XXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRL 240 VPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRL Sbjct: 181 AATLRAVRALTGVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRL 240 Query: 241 DAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDL 300 DAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDL Sbjct: 241 DAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDL 300 Query: 301 VLSGGWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXX 360 VLSGGWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDP Sbjct: 301 VLSGGWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPAAIKAEVAAAIGTTS 360 Query: 361 XXXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTI 420 VVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTI Sbjct: 361 TAATATTTPAKPSPSTVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTI 420 Query: 421 KYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKP 480 KYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAP YPKP Sbjct: 421 KYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPDDSDDDTTTYPKP 480 Query: 481 NAYYNGGDDSSSYPAPDHGQPIDGGGVPCVN 511 NAYYNGGDDSSSYPAPDHGQPIDGGGVPCVN Sbjct: 481 NAYYNGGDDSSSYPAPDHGQPIDGGGVPCVN 511 >tr|A0PUS6|A0PUS6_MYCUA Tax_Id=362242 (cpsA)SubName: Full=Conserved hypothetical membrane protein CpsA;[Mycobacterium ulcerans] Length = 491 Score = 852 bits (2202), Expect = 0.0 Identities = 432/491 (87%), Positives = 434/491 (88%) Query: 21 VSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRK 80 +SR LMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRK Sbjct: 1 MSRILMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRK 60 Query: 81 DQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAFSIPRDDWVPFTGVPGY 140 DQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAFSIPRDDWVPFTGVPGY Sbjct: 61 DQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAFSIPRDDWVPFTGVPGY 120 Query: 141 NHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYFAE 200 NHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGRE VPIDYFAE Sbjct: 121 NHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREAGRAATLRAVRALTGVPIDYFAE 180 Query: 201 VNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNGDL 260 VNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNGDL Sbjct: 181 VNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNGDL 240 Query: 261 DRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWDEDLIRRMGELAGA 320 DRTHRQQ FLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWDEDL+RRMGELAGA Sbjct: 241 DRTHRQQVFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWDEDLVRRMGELAGA 300 Query: 321 DIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVDV 380 DIEFRTLPVVRYDNIDGQDVNIVDP VVDV Sbjct: 301 DIEFRTLPVVRYDNIDGQDVNIVDPAAIKAEVAAAIGSTSTAATATTTPAKPSPSTVVDV 360 Query: 381 VNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPGAQADAMNLGTLLGID 440 VNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPGAQADAMNLGTLLGID Sbjct: 361 VNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPGAQADAMNLGTLLGID 420 Query: 441 APKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDSSSYPAPDHGQ 500 APKQPDASIEPGHIQVTVDTNFSMPAP YPKPNAYYNGGDDSSSYPAPDHGQ Sbjct: 421 APKQPDASIEPGHIQVTVDTNFSMPAPDDSDDDTTVYPKPNAYYNGGDDSSSYPAPDHGQ 480 Query: 501 PIDGGGVPCVN 511 PIDGGGVPCVN Sbjct: 481 PIDGGGVPCVN 491 >tr|Q7TWE7|Q7TWE7_MYCBO Tax_Id=1765 (cpsA)SubName: Full=POSSIBLE CONSERVED PROTEIN CPSA;[Mycobacterium bovis] Length = 512 Score = 724 bits (1870), Expect = 0.0 Identities = 370/507 (72%), Positives = 406/507 (80%), Gaps = 2/507 (0%) Query: 5 KARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRS 64 + RHRAV +PS IR+R+SR +MTLVSVVAL MTGAGYWVAHGAL GITISQALT EDPRS Sbjct: 8 RPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQALTPEDPRS 67 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAF 124 +GNNMNILLIGLDSRKDQEGNDLPWS+LK LHAGDSD GGYNTNTLILVHV ADGKVVAF Sbjct: 68 SGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGADGKVVAF 127 Query: 125 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXX 184 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVA++L +QGV+ ++ELETRGRE Sbjct: 128 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATL 187 Query: 185 XXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQ 244 VPIDYFAE+NLAGFYDLAQ LGGV+VCLNHAV DSYSGADFPAGRQRL+AAQ Sbjct: 188 RAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRLNAAQ 247 Query: 245 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSG 304 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMR+LQDSGTFTNLDRLD+LMAVARKD+VLS Sbjct: 248 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVARKDVVLSA 307 Query: 305 GWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 GWDEDL RRMG+LAG ++EFRTLPVVRYDNIDGQDVNI+DP Sbjct: 308 GWDEDLFRRMGDLAGGNVEFRTLPVVRYDNIDGQDVNIIDP-TAIRAEVAAAFGSAPPTS 366 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP 424 VVDVVNAGSISGLASQVS AL KRGYT QVRDR+SGDP T I+YG Sbjct: 367 QTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGA 426 Query: 425 GAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYY 484 GA+ DA N+ LLGIDAP PD ++ PGHI+VTVDTNFS+PAP + + Y Sbjct: 427 GAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEATAAATS-TETSTYP 485 Query: 485 NGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G +++ P PD G PIDGGGVPCVN Sbjct: 486 LYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|O06347|O06347_MYCTU Tax_Id=1773 (cpsA)SubName: Full=POSSIBLE CONSERVED PROTEIN CPSA;[Mycobacterium tuberculosis] Length = 512 Score = 724 bits (1870), Expect = 0.0 Identities = 370/507 (72%), Positives = 406/507 (80%), Gaps = 2/507 (0%) Query: 5 KARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRS 64 + RHRAV +PS IR+R+SR +MTLVSVVAL MTGAGYWVAHGAL GITISQALT EDPRS Sbjct: 8 RPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQALTPEDPRS 67 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAF 124 +GNNMNILLIGLDSRKDQEGNDLPWS+LK LHAGDSD GGYNTNTLILVHV ADGKVVAF Sbjct: 68 SGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGADGKVVAF 127 Query: 125 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXX 184 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVA++L +QGV+ ++ELETRGRE Sbjct: 128 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATL 187 Query: 185 XXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQ 244 VPIDYFAE+NLAGFYDLAQ LGGV+VCLNHAV DSYSGADFPAGRQRL+AAQ Sbjct: 188 RAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRLNAAQ 247 Query: 245 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSG 304 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMR+LQDSGTFTNLDRLD+LMAVARKD+VLS Sbjct: 248 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVARKDVVLSA 307 Query: 305 GWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 GWDEDL RRMG+LAG ++EFRTLPVVRYDNIDGQDVNI+DP Sbjct: 308 GWDEDLFRRMGDLAGGNVEFRTLPVVRYDNIDGQDVNIIDP-TAIRAEVAAAFGSAPPTS 366 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP 424 VVDVVNAGSISGLASQVS AL KRGYT QVRDR+SGDP T I+YG Sbjct: 367 QTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGA 426 Query: 425 GAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYY 484 GA+ DA N+ LLGIDAP PD ++ PGHI+VTVDTNFS+PAP + + Y Sbjct: 427 GAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEATAAATS-TETSTYP 485 Query: 485 NGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G +++ P PD G PIDGGGVPCVN Sbjct: 486 LYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|C6DM03|C6DM03_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 512 Score = 724 bits (1870), Expect = 0.0 Identities = 370/507 (72%), Positives = 406/507 (80%), Gaps = 2/507 (0%) Query: 5 KARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRS 64 + RHRAV +PS IR+R+SR +MTLVSVVAL MTGAGYWVAHGAL GITISQALT EDPRS Sbjct: 8 RPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQALTPEDPRS 67 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAF 124 +GNNMNILLIGLDSRKDQEGNDLPWS+LK LHAGDSD GGYNTNTLILVHV ADGKVVAF Sbjct: 68 SGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGADGKVVAF 127 Query: 125 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXX 184 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVA++L +QGV+ ++ELETRGRE Sbjct: 128 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATL 187 Query: 185 XXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQ 244 VPIDYFAE+NLAGFYDLAQ LGGV+VCLNHAV DSYSGADFPAGRQRL+AAQ Sbjct: 188 RAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRLNAAQ 247 Query: 245 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSG 304 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMR+LQDSGTFTNLDRLD+LMAVARKD+VLS Sbjct: 248 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVARKDVVLSA 307 Query: 305 GWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 GWDEDL RRMG+LAG ++EFRTLPVVRYDNIDGQDVNI+DP Sbjct: 308 GWDEDLFRRMGDLAGGNVEFRTLPVVRYDNIDGQDVNIIDP-TAIRAEVAAAFGSAPPTS 366 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP 424 VVDVVNAGSISGLASQVS AL KRGYT QVRDR+SGDP T I+YG Sbjct: 367 QTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGA 426 Query: 425 GAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYY 484 GA+ DA N+ LLGIDAP PD ++ PGHI+VTVDTNFS+PAP + + Y Sbjct: 427 GAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEATAAATS-TETSTYP 485 Query: 485 NGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G +++ P PD G PIDGGGVPCVN Sbjct: 486 LYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|C1AHU1|C1AHU1_MYCBT Tax_Id=561275 (cpsA)SubName: Full=Putative uncharacterized protein cpsA;[Mycobacterium bovis] Length = 512 Score = 724 bits (1870), Expect = 0.0 Identities = 370/507 (72%), Positives = 406/507 (80%), Gaps = 2/507 (0%) Query: 5 KARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRS 64 + RHRAV +PS IR+R+SR +MTLVSVVAL MTGAGYWVAHGAL GITISQALT EDPRS Sbjct: 8 RPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQALTPEDPRS 67 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAF 124 +GNNMNILLIGLDSRKDQEGNDLPWS+LK LHAGDSD GGYNTNTLILVHV ADGKVVAF Sbjct: 68 SGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGADGKVVAF 127 Query: 125 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXX 184 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVA++L +QGV+ ++ELETRGRE Sbjct: 128 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATL 187 Query: 185 XXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQ 244 VPIDYFAE+NLAGFYDLAQ LGGV+VCLNHAV DSYSGADFPAGRQRL+AAQ Sbjct: 188 RAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRLNAAQ 247 Query: 245 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSG 304 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMR+LQDSGTFTNLDRLD+LMAVARKD+VLS Sbjct: 248 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVARKDVVLSA 307 Query: 305 GWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 GWDEDL RRMG+LAG ++EFRTLPVVRYDNIDGQDVNI+DP Sbjct: 308 GWDEDLFRRMGDLAGGNVEFRTLPVVRYDNIDGQDVNIIDP-TAIRAEVAAAFGSAPPTS 366 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP 424 VVDVVNAGSISGLASQVS AL KRGYT QVRDR+SGDP T I+YG Sbjct: 367 QTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGA 426 Query: 425 GAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYY 484 GA+ DA N+ LLGIDAP PD ++ PGHI+VTVDTNFS+PAP + + Y Sbjct: 427 GAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEATAAATS-TETSTYP 485 Query: 485 NGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G +++ P PD G PIDGGGVPCVN Sbjct: 486 LYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|A5U8F9|A5U8F9_MYCTA Tax_Id=419947 (cpsA)SubName: Full=Putative conserved protein CpsA;[Mycobacterium tuberculosis] Length = 512 Score = 724 bits (1870), Expect = 0.0 Identities = 370/507 (72%), Positives = 406/507 (80%), Gaps = 2/507 (0%) Query: 5 KARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRS 64 + RHRAV +PS IR+R+SR +MTLVSVVAL MTGAGYWVAHGAL GITISQALT EDPRS Sbjct: 8 RPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQALTPEDPRS 67 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAF 124 +GNNMNILLIGLDSRKDQEGNDLPWS+LK LHAGDSD GGYNTNTLILVHV ADGKVVAF Sbjct: 68 SGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGADGKVVAF 127 Query: 125 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXX 184 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVA++L +QGV+ ++ELETRGRE Sbjct: 128 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATL 187 Query: 185 XXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQ 244 VPIDYFAE+NLAGFYDLAQ LGGV+VCLNHAV DSYSGADFPAGRQRL+AAQ Sbjct: 188 RAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRLNAAQ 247 Query: 245 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSG 304 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMR+LQDSGTFTNLDRLD+LMAVARKD+VLS Sbjct: 248 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVARKDVVLSA 307 Query: 305 GWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 GWDEDL RRMG+LAG ++EFRTLPVVRYDNIDGQDVNI+DP Sbjct: 308 GWDEDLFRRMGDLAGGNVEFRTLPVVRYDNIDGQDVNIIDP-TAIRAEVAAAFGSAPPTS 366 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP 424 VVDVVNAGSISGLASQVS AL KRGYT QVRDR+SGDP T I+YG Sbjct: 367 QTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGA 426 Query: 425 GAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYY 484 GA+ DA N+ LLGIDAP PD ++ PGHI+VTVDTNFS+PAP + + Y Sbjct: 427 GAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEATAAATS-TETSTYP 485 Query: 485 NGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G +++ P PD G PIDGGGVPCVN Sbjct: 486 LYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|A1KPG9|A1KPG9_MYCBP Tax_Id=410289 (cpsA)SubName: Full=Possible conserved protein cpsA;[Mycobacterium bovis] Length = 512 Score = 724 bits (1870), Expect = 0.0 Identities = 370/507 (72%), Positives = 406/507 (80%), Gaps = 2/507 (0%) Query: 5 KARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRS 64 + RHRAV +PS IR+R+SR +MTLVSVVAL MTGAGYWVAHGAL GITISQALT EDPRS Sbjct: 8 RPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQALTPEDPRS 67 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAF 124 +GNNMNILLIGLDSRKDQEGNDLPWS+LK LHAGDSD GGYNTNTLILVHV ADGKVVAF Sbjct: 68 SGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGADGKVVAF 127 Query: 125 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXX 184 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVA++L +QGV+ ++ELETRGRE Sbjct: 128 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATL 187 Query: 185 XXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQ 244 VPIDYFAE+NLAGFYDLAQ LGGV+VCLNHAV DSYSGADFPAGRQRL+AAQ Sbjct: 188 RAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRLNAAQ 247 Query: 245 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSG 304 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMR+LQDSGTFTNLDRLD+LMAVARKD+VLS Sbjct: 248 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVARKDVVLSA 307 Query: 305 GWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 GWDEDL RRMG+LAG ++EFRTLPVVRYDNIDGQDVNI+DP Sbjct: 308 GWDEDLFRRMGDLAGGNVEFRTLPVVRYDNIDGQDVNIIDP-TAIRAEVAAAFGSAPPTS 366 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP 424 VVDVVNAGSISGLASQVS AL KRGYT QVRDR+SGDP T I+YG Sbjct: 367 QTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGA 426 Query: 425 GAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYY 484 GA+ DA N+ LLGIDAP PD ++ PGHI+VTVDTNFS+PAP + + Y Sbjct: 427 GAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEATAAATS-TETSTYP 485 Query: 485 NGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G +++ P PD G PIDGGGVPCVN Sbjct: 486 LYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|Q7D5G2|Q7D5G2_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 513 Score = 724 bits (1870), Expect = 0.0 Identities = 370/507 (72%), Positives = 406/507 (80%), Gaps = 2/507 (0%) Query: 5 KARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRS 64 + RHRAV +PS IR+R+SR +MTLVSVVAL MTGAGYWVAHGAL GITISQALT EDPRS Sbjct: 9 RPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQALTPEDPRS 68 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAF 124 +GNNMNILLIGLDSRKDQEGNDLPWS+LK LHAGDSD GGYNTNTLILVHV ADGKVVAF Sbjct: 69 SGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGADGKVVAF 128 Query: 125 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXX 184 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVA++L +QGV+ ++ELETRGRE Sbjct: 129 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATL 188 Query: 185 XXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQ 244 VPIDYFAE+NLAGFYDLAQ LGGV+VCLNHAV DSYSGADFPAGRQRL+AAQ Sbjct: 189 RAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRLNAAQ 248 Query: 245 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSG 304 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMR+LQDSGTFTNLDRLD+LMAVARKD+VLS Sbjct: 249 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVARKDVVLSA 308 Query: 305 GWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 GWDEDL RRMG+LAG ++EFRTLPVVRYDNIDGQDVNI+DP Sbjct: 309 GWDEDLFRRMGDLAGGNVEFRTLPVVRYDNIDGQDVNIIDP-TAIRAEVAAAFGSAPPTS 367 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP 424 VVDVVNAGSISGLASQVS AL KRGYT QVRDR+SGDP T I+YG Sbjct: 368 QTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGA 427 Query: 425 GAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYY 484 GA+ DA N+ LLGIDAP PD ++ PGHI+VTVDTNFS+PAP + + Y Sbjct: 428 GAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEATAAATS-TETSTYP 486 Query: 485 NGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G +++ P PD G PIDGGGVPCVN Sbjct: 487 LYGGGTTTDPTPDQGAPIDGGGVPCVN 513 >tr|A5WT55|A5WT55_MYCTF Tax_Id=336982 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 512 Score = 724 bits (1870), Expect = 0.0 Identities = 370/507 (72%), Positives = 406/507 (80%), Gaps = 2/507 (0%) Query: 5 KARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRS 64 + RHRAV +PS IR+R+SR +MTLVSVVAL MTGAGYWVAHGAL GITISQALT EDPRS Sbjct: 8 RPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQALTPEDPRS 67 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAF 124 +GNNMNILLIGLDSRKDQEGNDLPWS+LK LHAGDSD GGYNTNTLILVHV ADGKVVAF Sbjct: 68 SGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGADGKVVAF 127 Query: 125 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXX 184 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVA++L +QGV+ ++ELETRGRE Sbjct: 128 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATL 187 Query: 185 XXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQ 244 VPIDYFAE+NLAGFYDLAQ LGGV+VCLNHAV DSYSGADFPAGRQRL+AAQ Sbjct: 188 RAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRLNAAQ 247 Query: 245 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSG 304 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMR+LQDSGTFTNLDRLD+LMAVARKD+VLS Sbjct: 248 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVARKDVVLSA 307 Query: 305 GWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 GWDEDL RRMG+LAG ++EFRTLPVVRYDNIDGQDVNI+DP Sbjct: 308 GWDEDLFRRMGDLAGGNVEFRTLPVVRYDNIDGQDVNIIDP-TAIRAEVAAAFGSAPPTS 366 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP 424 VVDVVNAGSISGLASQVS AL KRGYT QVRDR+SGDP T I+YG Sbjct: 367 QTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGA 426 Query: 425 GAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYY 484 GA+ DA N+ LLGIDAP PD ++ PGHI+VTVDTNFS+PAP + + Y Sbjct: 427 GAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEATAAATS-TETSTYP 485 Query: 485 NGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G +++ P PD G PIDGGGVPCVN Sbjct: 486 LYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|A4KTF3|A4KTF3_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 512 Score = 724 bits (1870), Expect = 0.0 Identities = 370/507 (72%), Positives = 406/507 (80%), Gaps = 2/507 (0%) Query: 5 KARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRS 64 + RHRAV +PS IR+R+SR +MTLVSVVAL MTGAGYWVAHGAL GITISQALT EDPRS Sbjct: 8 RPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQALTPEDPRS 67 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAF 124 +GNNMNILLIGLDSRKDQEGNDLPWS+LK LHAGDSD GGYNTNTLILVHV ADGKVVAF Sbjct: 68 SGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGADGKVVAF 127 Query: 125 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXX 184 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVA++L +QGV+ ++ELETRGRE Sbjct: 128 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATL 187 Query: 185 XXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQ 244 VPIDYFAE+NLAGFYDLAQ LGGV+VCLNHAV DSYSGADFPAGRQRL+AAQ Sbjct: 188 RAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRLNAAQ 247 Query: 245 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSG 304 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMR+LQDSGTFTNLDRLD+LMAVARKD+VLS Sbjct: 248 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVARKDVVLSA 307 Query: 305 GWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 GWDEDL RRMG+LAG ++EFRTLPVVRYDNIDGQDVNI+DP Sbjct: 308 GWDEDLFRRMGDLAGGNVEFRTLPVVRYDNIDGQDVNIIDP-TAIRAEVAAAFGSAPPTS 366 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP 424 VVDVVNAGSISGLASQVS AL KRGYT QVRDR+SGDP T I+YG Sbjct: 367 QTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGA 426 Query: 425 GAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYY 484 GA+ DA N+ LLGIDAP PD ++ PGHI+VTVDTNFS+PAP + + Y Sbjct: 427 GAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEATAAATS-TETSTYP 485 Query: 485 NGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G +++ P PD G PIDGGGVPCVN Sbjct: 486 LYGGGTTTDPTPDQGAPIDGGGVPCVN 512 >tr|A2VPQ7|A2VPQ7_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 513 Score = 724 bits (1870), Expect = 0.0 Identities = 370/507 (72%), Positives = 406/507 (80%), Gaps = 2/507 (0%) Query: 5 KARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRS 64 + RHRAV +PS IR+R+SR +MTLVSVVAL MTGAGYWVAHGAL GITISQALT EDPRS Sbjct: 9 RPRHRAVPQPSRIRKRLSRGVMTLVSVVALLMTGAGYWVAHGALGGITISQALTPEDPRS 68 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAF 124 +GNNMNILLIGLDSRKDQEGNDLPWS+LK LHAGDSD GGYNTNTLILVHV ADGKVVAF Sbjct: 69 SGNNMNILLIGLDSRKDQEGNDLPWSVLKQLHAGDSDDGGYNTNTLILVHVGADGKVVAF 128 Query: 125 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXX 184 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVA++L +QGV+ ++ELETRGRE Sbjct: 129 SIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATL 188 Query: 185 XXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQ 244 VPIDYFAE+NLAGFYDLAQ LGGV+VCLNHAV DSYSGADFPAGRQRL+AAQ Sbjct: 189 RAVRSLTGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRLNAAQ 248 Query: 245 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSG 304 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMR+LQDSGTFTNLDRLD+LMAVARKD+VLS Sbjct: 249 ALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRELQDSGTFTNLDRLDNLMAVARKDVVLSA 308 Query: 305 GWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 GWDEDL RRMG+LAG ++EFRTLPVVRYDNIDGQDVNI+DP Sbjct: 309 GWDEDLFRRMGDLAGGNVEFRTLPVVRYDNIDGQDVNIIDP-TAIRAEVAAAFGSAPPTS 367 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP 424 VVDVVNAGSISGLASQVS AL KRGYT QVRDR+SGDP T I+YG Sbjct: 368 QTAAAAKPNPSTVVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGA 427 Query: 425 GAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYY 484 GA+ DA N+ LLGIDAP PD ++ PGHI+VTVDTNFS+PAP + + Y Sbjct: 428 GAETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFSLPAPDEATAAATS-TETSTYP 486 Query: 485 NGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G +++ P PD G PIDGGGVPCVN Sbjct: 487 LYGGGTTTDPTPDQGAPIDGGGVPCVN 513 >tr|Q743K6|Q743K6_MYCPA Tax_Id=1770 (cpsA)SubName: Full=CpsA;[Mycobacterium paratuberculosis] Length = 520 Score = 697 bits (1798), Expect = 0.0 Identities = 354/518 (68%), Positives = 404/518 (77%), Gaps = 10/518 (1%) Query: 2 GRTKARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAED 61 G RHRAVR+PS R+ ++RTL LVSV A+G+TGAGY+VAHGAL GIT+S AL +D Sbjct: 5 GGAHRRHRAVRQPSRFRKGLTRTLGALVSVAAIGLTGAGYYVAHGALGGITVSNALQPDD 64 Query: 62 PRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKV 121 PRS+G+NMNILLIGLDSRKDQ+GNDLP+SILKHLHAGDSD GGYNTNTLILVHVSAD KV Sbjct: 65 PRSSGDNMNILLIGLDSRKDQDGNDLPYSILKHLHAGDSDDGGYNTNTLILVHVSADNKV 124 Query: 122 VAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXX 181 VAFSIPRDDWVPF+GVPGYNHIKIKEAYGLTKQYVAQ+L +QG +SQ+ELET+GRE Sbjct: 125 VAFSIPRDDWVPFSGVPGYNHIKIKEAYGLTKQYVAQKLANQGTSSQKELETKGREAGRA 184 Query: 182 XXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLD 241 VPIDYFAEVNLAGFYDLAQ LGGVEVCLNH V DSYSGADFPAGRQRLD Sbjct: 185 ATLRAVRNLTGVPIDYFAEVNLAGFYDLAQTLGGVEVCLNHPVYDSYSGADFPAGRQRLD 244 Query: 242 AAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLV 301 A++AL+FVRQRHGLDNGDLDRTHRQQAF+SSVM++LQ +GTFTN+D+L +LMAVARKD+V Sbjct: 245 ASEALSFVRQRHGLDNGDLDRTHRQQAFISSVMQELQAAGTFTNIDKLKNLMAVARKDVV 304 Query: 302 LSGGWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXX 361 LS GW +D+I+R+G LAG +IEFRTLPVVRYDNIDGQDVNIVDP Sbjct: 305 LSAGWTDDMIQRLGGLAGGNIEFRTLPVVRYDNIDGQDVNIVDPAAIKAEVAAAIGANAP 364 Query: 362 XXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIK 421 VVDVVN+GS+SGLAS+VS+AL+KRGYTT QVRDR+SGDPAATTI+ Sbjct: 365 TSAPTSTSVAPDPSTVVDVVNSGSMSGLASEVSHALKKRGYTTGQVRDRESGDPAATTIE 424 Query: 422 YGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPN 481 YG GAQ DA NL LL +DAP QP SI PGHI++TVDTNF+MP Sbjct: 425 YGAGAQNDARNLANLLSLDAPNQPSPSIAPGHIRLTVDTNFTMPTTDDTQLDDTTSTSST 484 Query: 482 A--------YYNGGDDSSSYPAPDHGQPIDGGGVPCVN 511 YYNG +++YP PD G+PIDGGGVPCVN Sbjct: 485 TTSSKAKTYYYNG--TTTTYPTPDQGKPIDGGGVPCVN 520 >tr|A0QAL4|A0QAL4_MYCA1 Tax_Id=243243 SubName: Full=Cell envelope-related function transcriptional attenuator domain protein;[Mycobacterium avium] Length = 521 Score = 697 bits (1798), Expect = 0.0 Identities = 354/518 (68%), Positives = 404/518 (77%), Gaps = 10/518 (1%) Query: 2 GRTKARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAED 61 G RHRAVR+PS R+ ++RTL LVSV A+G+TGAGY+VAHGAL GIT+S AL +D Sbjct: 6 GGAHRRHRAVRQPSRFRKGLTRTLGALVSVAAIGLTGAGYYVAHGALGGITVSNALQPDD 65 Query: 62 PRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKV 121 PRS+G+NMNILLIGLDSRKDQ+GNDLP+SILKHLHAGDSD GGYNTNTLILVHVSAD KV Sbjct: 66 PRSSGDNMNILLIGLDSRKDQDGNDLPYSILKHLHAGDSDDGGYNTNTLILVHVSADNKV 125 Query: 122 VAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXX 181 VAFSIPRDDWVPF+GVPGYNHIKIKEAYGLTKQYVAQ+L +QG +SQ+ELET+GRE Sbjct: 126 VAFSIPRDDWVPFSGVPGYNHIKIKEAYGLTKQYVAQKLANQGTSSQKELETKGREAGRA 185 Query: 182 XXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLD 241 VPIDYFAEVNLAGFYDLAQ LGGVEVCLNH V DSYSGADFPAGRQRLD Sbjct: 186 ATLRAVRNLTGVPIDYFAEVNLAGFYDLAQTLGGVEVCLNHPVYDSYSGADFPAGRQRLD 245 Query: 242 AAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLV 301 A++AL+FVRQRHGLDNGDLDRTHRQQAF+SSVM++LQ +GTFTN+D+L +LMAVARKD+V Sbjct: 246 ASEALSFVRQRHGLDNGDLDRTHRQQAFISSVMQELQAAGTFTNIDKLKNLMAVARKDVV 305 Query: 302 LSGGWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXX 361 LS GW +D+I+R+G LAG +IEFRTLPVVRYDNIDGQDVNIVDP Sbjct: 306 LSAGWTDDMIQRLGGLAGGNIEFRTLPVVRYDNIDGQDVNIVDPAAIKAEVAAAIGADAP 365 Query: 362 XXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIK 421 VVDVVN+GS+SGLAS+VS+AL+KRGYTT QVRDR+SGDPAATTI+ Sbjct: 366 TSAPTSTSVAPDPSTVVDVVNSGSMSGLASEVSHALKKRGYTTGQVRDRESGDPAATTIE 425 Query: 422 YGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPN 481 YG GAQ DA NL LL +DAP QP SI PGHI++TVDTNF+MP Sbjct: 426 YGAGAQNDARNLANLLSLDAPNQPSPSIAPGHIRLTVDTNFTMPTTDDTQLDDTTSTSST 485 Query: 482 A--------YYNGGDDSSSYPAPDHGQPIDGGGVPCVN 511 YYNG +++YP PD G+PIDGGGVPCVN Sbjct: 486 TTSSKAKTYYYNG--TTTTYPTPDQGKPIDGGGVPCVN 521 >tr|Q50160|Q50160_MYCLE Tax_Id=1769 (cpsA)SubName: Full=Putative uncharacterized protein cpsA; SubName: Full=CpsA;[Mycobacterium leprae] Length = 516 Score = 645 bits (1665), Expect = 0.0 Identities = 334/511 (65%), Positives = 380/511 (74%), Gaps = 10/511 (1%) Query: 7 RHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTG 66 RHRA+ KPS IR ++R+ MTL S VA+ +TGAGYWVAH AL IT+SQALT +DPRST Sbjct: 10 RHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTD 69 Query: 67 NNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAFSI 126 NN+NILLIGLDSRKDQ+GNDLPWSILK LHAGDS+ GGYNTNTLILVHV AD K VAFSI Sbjct: 70 NNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADNKAVAFSI 129 Query: 127 PRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXX 186 PRDDWVPF+ VPGYNHIKIKEAYGLTKQYV Q+LIDQGVT Q+ELET+GRE Sbjct: 130 PRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRI 189 Query: 187 XXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQAL 246 V IDYFAEVNLAGFYDL LGGVEVCLNHAV DSYSGADFPAGRQRLDA++AL Sbjct: 190 VRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEAL 249 Query: 247 AFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGW 306 AFVRQRHGLDNGDLDRTHRQQAF+SSVMR+L D+GTFTNLD+L SLMAVARKD+VLS GW Sbjct: 250 AFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGW 309 Query: 307 DEDLIRRMGELAGADI-----EFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXX 361 +EDLI+R+G LA D+ +FRTLPVVRYDNI+GQ VNI+DP Sbjct: 310 NEDLIQRLGTLAN-DVGENRTQFRTLPVVRYDNINGQAVNIIDP---VAIKAEVASTIGT 365 Query: 362 XXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIK 421 VVDV+NAG ++GLAS+V L+K GYT QVRDR SG+P T+I+ Sbjct: 366 ASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQ 425 Query: 422 YGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPA-PXXXXXXXXXYPKP 480 YG GA DA N+ TLL IDAP Q D + GHI+V VDTN+S+PA K Sbjct: 426 YGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETITSQKV 485 Query: 481 NAYYNGGDDSSSYPAPDHGQPIDGGGVPCVN 511 Y ++S YP PD G+PIDGGG+PCVN Sbjct: 486 GTYPPYSYNTSPYPTPDQGKPIDGGGIPCVN 516 >tr|B8ZSW7|B8ZSW7_MYCLB Tax_Id=561304 (cpsA)SubName: Full=Putative uncharacterized protein cpsA;[Mycobacterium leprae] Length = 516 Score = 645 bits (1665), Expect = 0.0 Identities = 334/511 (65%), Positives = 380/511 (74%), Gaps = 10/511 (1%) Query: 7 RHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTG 66 RHRA+ KPS IR ++R+ MTL S VA+ +TGAGYWVAH AL IT+SQALT +DPRST Sbjct: 10 RHRAIHKPSRIRIALTRSFMTLTSFVAVLLTGAGYWVAHRALEDITVSQALTTDDPRSTD 69 Query: 67 NNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVVAFSI 126 NN+NILLIGLDSRKDQ+GNDLPWSILK LHAGDS+ GGYNTNTLILVHV AD K VAFSI Sbjct: 70 NNINILLIGLDSRKDQQGNDLPWSILKQLHAGDSNDGGYNTNTLILVHVGADNKAVAFSI 129 Query: 127 PRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXX 186 PRDDWVPF+ VPGYNHIKIKEAYGLTKQYV Q+LIDQGVT Q+ELET+GRE Sbjct: 130 PRDDWVPFSDVPGYNHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRI 189 Query: 187 XXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQAL 246 V IDYFAEVNLAGFYDL LGGVEVCLNHAV DSYSGADFPAGRQRLDA++AL Sbjct: 190 VRSLTGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRLDASEAL 249 Query: 247 AFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGW 306 AFVRQRHGLDNGDLDRTHRQQAF+SSVMR+L D+GTFTNLD+L SLMAVARKD+VLS GW Sbjct: 250 AFVRQRHGLDNGDLDRTHRQQAFISSVMRELGDTGTFTNLDKLRSLMAVARKDVVLSAGW 309 Query: 307 DEDLIRRMGELAGADI-----EFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXX 361 +EDLI+R+G LA D+ +FRTLPVVRYDNI+GQ VNI+DP Sbjct: 310 NEDLIQRLGTLAN-DVGENRTQFRTLPVVRYDNINGQAVNIIDP---VAIKAEVASTIGT 365 Query: 362 XXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIK 421 VVDV+NAG ++GLAS+V L+K GYT QVRDR SG+P T+I+ Sbjct: 366 ASPATATPSKPNPSTVVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQ 425 Query: 422 YGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPA-PXXXXXXXXXYPKP 480 YG GA DA N+ TLL IDAP Q D + GHI+V VDTN+S+PA K Sbjct: 426 YGAGADTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYSLPADEDSTMDETITSQKV 485 Query: 481 NAYYNGGDDSSSYPAPDHGQPIDGGGVPCVN 511 Y ++S YP PD G+PIDGGG+PCVN Sbjct: 486 GTYPPYSYNTSPYPTPDQGKPIDGGGIPCVN 516 >tr|B1MGX4|B1MGX4_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 514 Score = 479 bits (1234), Expect = e-133 Identities = 262/515 (50%), Positives = 332/515 (64%), Gaps = 11/515 (2%) Query: 2 GRTKARH---RAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALT 58 GR + +H ++ ++ S + +RT+ L++ +L +TGAG+ V + A + + S A Sbjct: 6 GRRRPKHALPKSNKRWSVSKTAAARTIFALLACGSLVVTGAGWQVFYKAFSHVPTSGA-E 64 Query: 59 AEDPRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSAD 118 AE +S+ +MN+LLIGLDSRKDQ+GNDLP ++L LHAGDSD GGYNTNTLILVHV AD Sbjct: 65 AEGGKSSDGSMNMLLIGLDSRKDQDGNDLPRAVLNQLHAGDSDAGGYNTNTLILVHVGAD 124 Query: 119 GKVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREX 178 KV AFSIPRDDWVP G+PGY HIKIKEAYGLTK A +L+++G+T Q LE + RE Sbjct: 125 NKVTAFSIPRDDWVPAEGIPGYKHIKIKEAYGLTKANEADKLVNEGITDQATLEQQSREA 184 Query: 179 XXXXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQ 238 PIDYFAEVNL GFYDLA LGG+ VCLN+AV DSYSGA+FPAG Q Sbjct: 185 GRRATLNAVHRLTGQPIDYFAEVNLVGFYDLASELGGITVCLNNAVYDSYSGANFPAGEQ 244 Query: 239 RLDAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARK 298 L+A+QALAFVRQRHGL+NGDLDRTHRQQAFL SVM+ L+++GT T++ +L+ LM V K Sbjct: 245 TLNASQALAFVRQRHGLENGDLDRTHRQQAFLISVMQQLRNAGTLTDITKLNGLMNVVHK 304 Query: 299 DLVLSGGWDEDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXX 358 D+VLS GW E +R+G++A ++ F+TLPVVRYDNI+G DVNIVDP Sbjct: 305 DVVLSKGWTEKQFQRLGQIADGNVNFQTLPVVRYDNINGADVNIVDP----VAIRAKVAA 360 Query: 359 XXXXXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAAT 418 VDVVNA S SGLAS VS+AL RGYT VRD SG+ T Sbjct: 361 AFKGEDAAPASAATTPTSTVDVVNATSTSGLASTVSSALVSRGYTKGDVRDPLSGESTGT 420 Query: 419 TIKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYP 478 I YG GA ADA + T+LGI+ D ++ PG I+V + T +S P+ Sbjct: 421 AIDYGVGADADAKAMSTMLGIETEPVADPTLAPGRIRVMLGTGYSAPSDVLSAEDSGTAS 480 Query: 479 KPNAYYNGGDDSSSYPAPDHGQPI--DGGGVPCVN 511 ++ + G S Y PD G+P+ GVPCVN Sbjct: 481 SMSSSSSSG-ASGDYAPPDSGKPVVSSNSGVPCVN 514 >tr|C2AS67|C2AS67_TSUPA Tax_Id=521096 SubName: Full=Cell envelope-related function transcriptional attenuator common domain;[Tsukamurella paurometabola DSM 20162] Length = 402 Score = 357 bits (915), Expect = 3e-96 Identities = 188/323 (58%), Positives = 235/323 (72%), Gaps = 3/323 (0%) Query: 26 MTLVSVVALGMTGAGYWVAHGALTGITISQALT-AEDPRSTGNNMNILLIGLDSRKDQEG 84 + L+S+V L +TG +W + + G +S AL A+ +STG + NILL+GLD+RKDQ+G Sbjct: 3 IALLSMVVLAVTGTLWWSTNLVIGGFNLSGALAEAKVAQSTGGDRNILLMGLDTRKDQDG 62 Query: 85 NDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVPGYNHI 143 NDLP +LK LHAGDS GGYNTNTLIL+HV ADGK VVAFSIPRDD+V GV + Sbjct: 63 NDLPDDVLKQLHAGDSSNGGYNTNTLILMHVPADGKKVVAFSIPRDDYVTLVGVKSRSKG 122 Query: 144 KIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYFAEVNL 203 KIKEAYGL K V +L QGVT ++ELE + RE VPID+FAEV+L Sbjct: 123 KIKEAYGLRKAEVQDQLAAQGVTDRKELEAKSRESARAATLATVERLVGVPIDHFAEVSL 182 Query: 204 AGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNGDLDRT 263 GFYDLA+ LGGVEVCLN V DSYSGA FPAGRQ+L+AAQ+L+FVRQRHGL +GDLDRT Sbjct: 183 VGFYDLAKTLGGVEVCLNKPVRDSYSGAAFPAGRQKLNAAQSLSFVRQRHGLADGDLDRT 242 Query: 264 HRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGELAGADI 322 HRQQAF++ VM LQ+ G F ++ +L SL++VA+KD+V+S GWD E ++ G++AG + Sbjct: 243 HRQQAFIAGVMMQLQNQGVFGDVRKLQSLISVAQKDVVISSGWDLEQFAKQAGKIAGTAL 302 Query: 323 EFRTLPVVRYDNIDGQDVNIVDP 345 F TLPV+ YD ID Q VNIVDP Sbjct: 303 TFTTLPVLGYDTIDEQAVNIVDP 325 >tr|C0ZNS0|C0ZNS0_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus erythropolis] Length = 509 Score = 321 bits (822), Expect = 2e-85 Identities = 211/519 (40%), Positives = 276/519 (53%), Gaps = 34/519 (6%) Query: 7 RHRAVRKPSPIRRRVSRTLMTL-VSVVALGMTGAGYWVAHGALTGITISQALTA--EDPR 63 RHR R+P V R L +S L G G++V +G+ S AL+A ED Sbjct: 11 RHRRRRQPQRSTLSVGRKLAAASLSTTILVGVGIGWYVQSDLTSGLYRSDALSALGEDAG 70 Query: 64 ST-GNNMNILLIGLDSRKDQEGNDLPWS-ILKHLHAGDSDQGGYNTNTLILVHVSADG-K 120 S+ + NILLIGLDSRK +G+DLP + LHAGDSD GGYNTNTLIL+HV DG K Sbjct: 71 SSLDGDTNILLIGLDSRKAMDGSDLPAEFVTDKLHAGDSDVGGYNTNTLILLHVPGDGGK 130 Query: 121 VVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXX 180 A +IPRDD+V VPGY KIKEAYG+ K +L+ GVT E + RE Sbjct: 131 ASAVAIPRDDYV---SVPGYGMAKIKEAYGMAKADADAKLVADGVTDPAAREQQAREVGR 187 Query: 181 XXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRL 240 VPID+FAEVNL GFYD+ A+G V+VCLN+ V D +SGA+FPAG Q L Sbjct: 188 RSTLTTVQNLLKVPIDHFAEVNLMGFYDVVSAIGPVQVCLNNPVQDDFSGANFPAGVQTL 247 Query: 241 DAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDL 300 DA+QAL+FVRQRHGLDNGDLDRTHRQQAF+S+V+ +L+ SG N+ ++ +L V +KD+ Sbjct: 248 DASQALSFVRQRHGLDNGDLDRTHRQQAFISAVIANLKGSGVIGNIPKMTALADVVKKDV 307 Query: 301 VLSGGWDE-DLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXX 359 V+ D + LAG +I+F TLP+ Y+ +DGQDVN+VDP Sbjct: 308 VIDSAMDPVRFASQASALAGGNIDFYTLPIEGYETVDGQDVNMVDPARLRSEVSRIFAGG 367 Query: 360 XXXXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATT 419 VVD+ N + GL + ++ A++ G +V + A + Sbjct: 368 DSASAPAMDTAISTGNEVVDIRNGTATDGLGAALAAAMKASGVEVGEV--STAAATAKSV 425 Query: 420 IKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVD---TNFS-MPAPXXXXXXXX 475 + YG GA+A A L LG+ A A+ E + + D T FS PA Sbjct: 426 VSYGVGAKAVAEALAEQLGVAAVPNEQAAAESVSVLIGEDNAQTVFSAAPAQSDSSVSAG 485 Query: 476 XYPKPNAYYNGGDDSSSYPAPDHGQPI---DGGGVPCVN 511 P A G PI GG+PCV+ Sbjct: 486 TVPDTGA---------------QGSPIRADANGGIPCVD 509 >tr|C3JHK0|C3JHK0_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, LytR family;[Rhodococcus erythropolis SK121] Length = 526 Score = 318 bits (815), Expect = 1e-84 Identities = 211/519 (40%), Positives = 274/519 (52%), Gaps = 34/519 (6%) Query: 7 RHRAVRKPSPIRRRVSRTLMTL-VSVVALGMTGAGYWVAHGALTGITISQALTA--EDPR 63 RHR R+P V R L +S L G G++V +G+ S AL+A ED Sbjct: 28 RHRRRRQPQRSTLSVGRKLAAASLSTTILVGVGIGWYVQSDLTSGLYRSDALSALGEDAG 87 Query: 64 ST-GNNMNILLIGLDSRKDQEGNDLPWS-ILKHLHAGDSDQGGYNTNTLILVHVSADG-K 120 S+ + NILLIGLDSRK +G+DLP + LHAGDSD GGYNTNTLIL+HV DG K Sbjct: 88 SSLDGDTNILLIGLDSRKAMDGSDLPAEFVTDKLHAGDSDVGGYNTNTLILLHVPGDGGK 147 Query: 121 VVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXX 180 A +IPRDD+V VPGY KIKEAYG+ K +LI GVT E + RE Sbjct: 148 ASAVAIPRDDYV---AVPGYGMAKIKEAYGMAKADADAKLIADGVTDPAAREQQAREVGR 204 Query: 181 XXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRL 240 VPID+FAEVNL GFYD+ A+G V+VCLN+ V D +SGA+FPAG Q L Sbjct: 205 RSTLTTVQNLLKVPIDHFAEVNLMGFYDVVSAIGPVQVCLNNPVQDDFSGANFPAGVQTL 264 Query: 241 DAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDL 300 DA+QAL+FVRQRHGLDNGDLDRTHRQQAF+S+V+ +L+ SG N+ ++ +L V +KD+ Sbjct: 265 DASQALSFVRQRHGLDNGDLDRTHRQQAFISAVIANLKGSGVIGNIPKMTALADVVKKDV 324 Query: 301 VLSGGWDE-DLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXXXXXXXXXXXXXX 359 V+ D + LAG +I+F TLP+ Y+ +DGQDVN+VDP Sbjct: 325 VIDSAMDPVRFASQASALAGGNIDFYTLPIEGYETVDGQDVNMVDPARLRSEVSRIFAGG 384 Query: 360 XXXXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATT 419 VVD+ N + GL + ++ + G +V + A + Sbjct: 385 DSASAPVMDTAVSTGNEVVDIRNGTATDGLGAALAAVTKASGVEVGEV--STAAATAKSV 442 Query: 420 IKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVD---TNFS-MPAPXXXXXXXX 475 + YG GA+A A L LG+ A A+ E + + D T FS PA Sbjct: 443 VSYGVGAKAVAEALAEQLGVAAVPNEQAAAESVSVLIGEDNAQTVFSAAPARSDSSVSAG 502 Query: 476 XYPKPNAYYNGGDDSSSYPAPDHGQPI---DGGGVPCVN 511 P A G PI GG+PCV+ Sbjct: 503 TVPDTGA---------------QGSPIRADANGGIPCVD 526 >tr|B4V4U7|B4V4U7_9ACTO Tax_Id=465541 SubName: Full=CpsA;[Streptomyces sp. Mg1] Length = 402 Score = 286 bits (731), Expect = 6e-75 Identities = 164/342 (47%), Positives = 206/342 (60%), Gaps = 9/342 (2%) Query: 6 ARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTG-ITISQALTAEDPRS 64 A R ++ P R + L+T +V A+ G W A+ L G I S+AL + Sbjct: 3 AHRRKTKRRHPSRGLGRKLLITGCAVTAIA--GGTAWYAYQDLAGSIGSSKALEGAEKSK 60 Query: 65 TGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADG-KVVA 123 G+ NILL+GLDSR+DQ G LP +L LHAG SD GGYN NTLIL+HV DG + A Sbjct: 61 FGDT-NILLMGLDSRRDQNGEKLPEEVLDKLHAGSSDIGGYNANTLILLHVPGDGGRPTA 119 Query: 124 FSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXX 183 FS+PRDD F +PG+ K+K+AYGL K L QGV QRELE GRE Sbjct: 120 FSVPRDD---FVAIPGHGKDKVKKAYGLAKAAREDALTAQGVKDQRELEREGREAGRKAQ 176 Query: 184 XXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAA 243 VP+D+FAE+NLAGFY LA AL GV VCL V D YSGADFPAGRQ L+ Sbjct: 177 LETVRNFLGVPVDHFAELNLAGFYHLADALKGVPVCLKKPVKDKYSGADFPAGRQNLNGQ 236 Query: 244 QALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLS 303 Q+LAFVRQRHGL+ GDLDRT RQQAFL+ L GTFT+ +L L+ A++D+V Sbjct: 237 QSLAFVRQRHGLEAGDLDRTKRQQAFLAGATHKLNSVGTFTDPTKLMKLIDSAKEDVVTD 296 Query: 304 GGWD-EDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVD 344 GWD +++ L+G F TLP+ R+ G+D+N+VD Sbjct: 297 AGWDLLSFVKQAKNLSGGKTRFVTLPIERFGRNHGEDINVVD 338 >tr|C7Q6T6|C7Q6T6_CATAD Tax_Id=479433 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Catenulispora acidiphila] Length = 382 Score = 280 bits (717), Expect = 2e-73 Identities = 161/321 (50%), Positives = 199/321 (61%), Gaps = 9/321 (2%) Query: 29 VSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRKDQEGNDLP 88 +SV+ + +TGA W+ L G S AL P+S ++NILL+GLDSR+D G+DLP Sbjct: 3 MSVLLISLTGA--WLRAAVLGGFQRSAALGGTIPKSHDGSVNILLMGLDSRRDNHGHDLP 60 Query: 89 WSILKHLHAGDS-DQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVPGYNHIKIK 146 +IL LHAG S D GGYNTNTLIL+HV ADG A S+PRDDWV +P KIK Sbjct: 61 AAILSKLHAGSSSDIGGYNTNTLILLHVPADGSPATAVSVPRDDWVD---IPNLGWHKIK 117 Query: 147 EAYGLTKQYVAQELIDQGVTSQRE-LETRGREXXXXXXXXXXXXXXXVPIDYFAEVNLAG 205 EAYG K L+ G + LE GRE VPID+FAEVNLAG Sbjct: 118 EAYGRAKAAQETALVKAGRGPTGDALEAAGREAGRAASIAAVQGLLNVPIDHFAEVNLAG 177 Query: 206 FYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNGDLDRTHR 265 FYD+A ALGGV VCLN V D YSGA FPAG Q LD + ALAFVRQRHGL GDLDRT R Sbjct: 178 FYDVAVALGGVTVCLNKPVQDDYSGAAFPAGVQTLDGSNALAFVRQRHGLPGGDLDRTRR 237 Query: 266 QQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWDE-DLIRRMGELAGADIEF 324 QQAFLS+V R L G +++ +L L+ ++D+V+ +D LI + G L I+F Sbjct: 238 QQAFLSAVQRKLSADGVLSDVGKLSDLVDAVKRDVVVDDSFDVLSLISKAGSLKAGRIQF 297 Query: 325 RTLPVVRYDNIDGQDVNIVDP 345 TLP+ + DG+DVN++DP Sbjct: 298 HTLPIEGFATRDGEDVNLIDP 318 >tr|A0QNN5|A0QNN5_MYCS2 Tax_Id=246196 SubName: Full=Cell envelope-related function transcriptional attenuator common domain;[Mycobacterium smegmatis] Length = 533 Score = 269 bits (688), Expect = 6e-70 Identities = 174/468 (37%), Positives = 245/468 (52%), Gaps = 17/468 (3%) Query: 4 TKARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPR 63 TK R R R+ + RR L+ L + L TG G+ HGAL GIT S AL E Sbjct: 9 TKPRRRTPRRAVRLARRA---LVGLTAAAILAGTGMGWVTYHGALDGITTSNALAGESG- 64 Query: 64 STGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADG-KVV 122 S G+ NIL++GLDSR DQ GN LP + + LHAGD GGYN N LI+VH+ DG Sbjct: 65 SVGDTENILIMGLDSRLDQHGNPLPEDVYQALHAGDETVGGYNANVLIVVHLPGDGGPAT 124 Query: 123 AFSIPRDDWVPFTGVP-GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXX 181 AFSIPRDD+V G P G K+K+AYG Q E + E + RE Sbjct: 125 AFSIPRDDYVDLAGCPSGICKGKVKQAYGFAYQ-AEMEATESEEEDPATREQKAREAGRK 183 Query: 182 XXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLD 241 +PID+F EV L F+++A+A+ + VCLN D YSGADF G Q++D Sbjct: 184 AEIATVRNLLGIPIDHFVEVTLGAFFEIAKAVAPITVCLNDDTSDPYSGADFRKGVQQID 243 Query: 242 AAQALAFVRQRHGLDN---GDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARK 298 AAQA+AFVRQR +++ DLDRT RQQAFL++++ L+ SG ++ +L L+ V ++ Sbjct: 244 AAQAMAFVRQRRDINDENFTDLDRTRRQQAFLAALVSALRQSGALSSPSKLRGLLDVTKQ 303 Query: 299 DLVLSGGWD-EDLIRRMGELAGADIEFRTLPVVRY-DNIDGQDVNIVD--PXXXXXXXXX 354 ++ L G+D +R L A TLP+ + N G+D+NI+D Sbjct: 304 NVALDAGFDLASFTKRASALTDAPPTLYTLPIKEFGQNAYGEDINIIDVPTIRKIVHDLV 363 Query: 355 XXXXXXXXXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGD 414 +DV+N + +GLA+++ +T Q+ D ++ + Sbjct: 364 SKDDPATTTATPDKPELNGHGATLDVINGSTYTGLAAKLQTTFAADNFTEGQIGDAEALE 423 Query: 415 PAATTIKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNF 462 P ATTI YGPGA A A +L T LG+ A P + +++T+ T+F Sbjct: 424 P-ATTIDYGPGADAAAHSLATELGVTA--TPSDWVLADTVRLTIGTDF 468 >tr|C7MWA0|C7MWA0_SACVD Tax_Id=471857 SubName: Full=Cell envelope-related function transcriptional attenuator common domain protein;[Saccharomonospora viridis] Length = 522 Score = 258 bits (660), Expect = 1e-66 Identities = 166/497 (33%), Positives = 247/497 (49%), Gaps = 23/497 (4%) Query: 22 SRTLMTLVSVVALGMTGAGYWVAHGALTGITISQAL---TAEDPRSTGNNMNILLIGLDS 78 +R ++ +VSV+ L +TG + G + G+T++ + T E P + ILL+G+DS Sbjct: 42 ARIVLAMVSVLVLTITGYAWAAMKGLVDGLTMADVIGEDTGELPADGARD--ILLVGMDS 99 Query: 79 RKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADG-KVVAFSIPRDDWVPFTGV 137 R D +GN LP +L L+AG +D G NT+TLILVH+ DG K VA S+PRD +V + Sbjct: 100 RVDAQGNPLPQDMLAKLNAGVAD-GELNTDTLILVHIPNDGRKAVALSLPRDSYV---NI 155 Query: 138 PGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDY 197 PG+ KI AY K + L +GVT ++ELE R + +D Sbjct: 156 PGFGQHKINSAYARGKAAAKERLRQEGVTDEQELEVRSNQEGAKTLIATVEALTGQTVDN 215 Query: 198 FAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDN 257 +A +NL GFY++ A+GGVEVCLN A D YSGA+F AGRQ + ALAFVRQRHGL Sbjct: 216 YASINLLGFYEITNAVGGVEVCLNQATRDPYSGANFKAGRQSISGVDALAFVRQRHGLLR 275 Query: 258 GDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGE 316 GDLDR RQQ FL+ + + +GT T+ +L+ L +K +V++ GWD ++M + Sbjct: 276 GDLDRVVRQQVFLAGLANKVLSAGTLTDPGKLERLTEAIKKSVVVNKGWDILSFAQQMKD 335 Query: 317 LAGADIEFRTLPV--VRYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 G IEF T+P+ ++ DG + I Sbjct: 336 FTGGQIEFHTIPIENPEFETPDGLAIKI------NPSEVRNFVAKLSGRKAEASPTPAPE 389 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPGAQADAMNLG 434 VD+ N +I GLAS VS AL +G+T +V + ++ ++ G ++ A + Sbjct: 390 EITVDIYNTSNIQGLASSVSEALVAQGFTQGEVAN--DTPRQSSVVQSASGERSSAEAVA 447 Query: 435 TLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDSSSYP 494 LG + + + + PGH++V + ++ P G + Sbjct: 448 AALGREIAVEENPDVSPGHVRVLLAPDYQQNGNSTPGAPAGGGNTPGTSVTGAPRQAGEE 507 Query: 495 APDHGQPIDGGGVPCVN 511 A + QPI GV CVN Sbjct: 508 AAE--QPITADGVTCVN 522 >tr|C6WNS4|C6WNS4_ACTMD Tax_Id=446462 SubName: Full=Cell envelope-related transcriptional attenuator;[Actinosynnema mirum] Length = 732 Score = 251 bits (640), Expect = 2e-64 Identities = 175/507 (34%), Positives = 245/507 (48%), Gaps = 25/507 (4%) Query: 14 PSPIRRRVS-RTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAE--DPRSTGNNMN 70 P P R R++ RT + LVS L TG GY + I + ++A+ + +++ Sbjct: 242 PPPSRVRLAGRTALALVSTAVLLATGYGYKNLNALTDNIATTDVISADAGGEKPQDGSID 301 Query: 71 ILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSAD-GKVVAFSIPRD 129 IL++G+DSR D +GN LP IL L AG S+ GG NT+TLIL+H+ D GK VA S PRD Sbjct: 302 ILMVGMDSRTDSKGNPLPQEILNELQAGGSEDGGLNTDTLILLHIPNDSGKAVAVSFPRD 361 Query: 130 DWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXX 189 +V G GY KI AYG K +EL G S LE + R+ Sbjct: 362 SYVDIPG--GYGKHKINSAYGYGKNAALEELEGAG-ESGTALELKARQAGSKSLISTIEN 418 Query: 190 XXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFV 249 V ID++AEVNL GFY++ +A+GGV+VCLN+AV D SGADF G Q + +AL+FV Sbjct: 419 LSGVKIDHYAEVNLVGFYEITKAVGGVDVCLNNAVQDDLSGADFKKGPQTIQGREALSFV 478 Query: 250 RQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWDE- 308 RQR+GL GDLDR RQQ F++ + + +GT T+ +L L+ K + L GWD Sbjct: 479 RQRYGLLRGDLDRVVRQQVFMAGLANKVLSAGTLTDPGKLGDLIDALSKSITLDEGWDVL 538 Query: 309 DLIRRMGELAGADIEFRTLPVVRYD---NIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXX 365 +M L G +EF+T+P + + DG V I+ Sbjct: 539 RFATQMKGLTGGSMEFKTIPTGNPELMTDSDGMAVEII-----PSQVKKFFKDFAKSEEE 593 Query: 366 XXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPG 425 V+V NA I GLAS+V L + D D A+ + YG G Sbjct: 594 KDKATVDPATVTVEVRNASGIPGLASRVLQELVALKFVAGDA-DNADADQVASAVLYGKG 652 Query: 426 AQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYN 485 +A A + LG D + DA++ G +V V +++ P + Sbjct: 653 GEAGAQAVADALG-DVEIKEDATVAAGTARVVVGSSYDGPGVANLLGQRL------LALD 705 Query: 486 GGDDSSSYPAPDH-GQPIDGGGVPCVN 511 GG + P D G I+ GG+ CVN Sbjct: 706 GGFRTQQGPQEDQTGAEINAGGIRCVN 732 >tr|A4FDR6|A4FDR6_SACEN Tax_Id=405948 SubName: Full=Transcriptional regulator;[Saccharopolyspora erythraea] Length = 521 Score = 249 bits (635), Expect = 8e-64 Identities = 183/515 (35%), Positives = 248/515 (48%), Gaps = 32/515 (6%) Query: 4 TKARHRAVRKPSPIRRR---VSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAE 60 T+ RA SP RRR ++RT L S + L +TG WV+ L G + +TA Sbjct: 32 TRPGSRASTDGSPRRRRWRALARTATALASGIVLVLTGYA-WVSLDRLQGGLSTSDVTAA 90 Query: 61 DPRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSAD-G 119 + ++ILL+GLD R D GN LP +L+ L G++D T+TL+L+H+ D Sbjct: 91 ---AEDGALDILLVGLDGRTDARGNPLPEELLRELRTGETDSS--LTDTLVLLHIPVDRS 145 Query: 120 KVVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXX 179 + VA+S+PRD +V G+ KI AYG K +L QGV ELE R + Sbjct: 146 RTVAYSLPRDSYVSIPD--GHGKHKINSAYGRAKAAAHAQLRAQGVADPAELERRSSDAG 203 Query: 180 XXXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQR 239 V +D++AEVNL GFY L +A+GGVEVCLN V+D YSGA FPAGRQ Sbjct: 204 RKLLVRTVEKLTGVGVDHYAEVNLLGFYQLTRAIGGVEVCLNAPVNDPYSGARFPAGRQL 263 Query: 240 LDAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKD 299 + ALAFVRQRHGL GDLDR RQQAF++ + R + +GT N RL+ + + Sbjct: 264 ISGGDALAFVRQRHGLPRGDLDRVQRQQAFMAGLARSVLSTGTLANPARLNGMFDAVEQS 323 Query: 300 LVLSGGWDE-DLIRRMGELAGADIEFRTLPV--VRYDNIDGQDVNIVDPXXXXXXXXXXX 356 +VL GWD +M LAG DI F T+PV YD DGQ V VDP Sbjct: 324 VVLDQGWDVLAFAEQMQGLAGGDITFDTIPVEDPDYDTPDGQAVR-VDP----RRVSAAI 378 Query: 357 XXXXXXXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPA 416 V+VVN +SGLAS+V L V D +G Sbjct: 379 RRADDGLPAEPPRPPELERSAVEVVNTTRVSGLASRVQEVLDAADIPVRDVDD--TGRAR 436 Query: 417 ATTIKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXX 476 + + +G G A + LG P + D+S+ I+V + ++ P Sbjct: 437 TSVVLHGAGGADVARYVAGHLG-GLPVRSDSSLRERRIRVLLGDDYRGPGADGLA----- 490 Query: 477 YPKPNAYYNGGDDSSSYPAPDHGQPIDGGGVPCVN 511 P P +G + A +PI+ +PCVN Sbjct: 491 -PAPLVRLDGERQPT---ATASEEPINADEIPCVN 521 >tr|Q73U03|Q73U03_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 516 Score = 243 bits (619), Expect = 6e-62 Identities = 180/507 (35%), Positives = 243/507 (47%), Gaps = 28/507 (5%) Query: 23 RTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRKDQ 82 R + ++ S + +TG G+ H AL I IS AL S G+N NILL+GLDSR DQ Sbjct: 18 RLVASVASAFVMAVTGVGWTGYHTALGRIIISHALP-NGAMSLGDNQNILLMGLDSRLDQ 76 Query: 83 EGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVS-ADGKVVAFSIPRDDWVPFTGVPGYN 141 G LP I LHAGD GGYN N LI+VH+S DG V A SIPRDD+ G PG Sbjct: 77 NGRPLPPEIYDALHAGDESSGGYNANVLIIVHLSDGDGPVTAVSIPRDDYAELPGCPGSV 136 Query: 142 HI-KIKEAYGLTKQYVAQELIDQ-------GVTSQRELETRGREXXXXXXXXXXXXXXXV 193 KIK+AYGL Q Q L Q G T E RE + Sbjct: 137 CAGKIKQAYGLAYQ---QSLNAQAAGNSGAGATDLAAREQTAREAGRKAEIGAVTDFLGI 193 Query: 194 PIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRH 253 +D+F EV L F+ +A+A+ + VCL DSYSGADF G QR+DAA+A+AFVRQR Sbjct: 194 SVDHFVEVTLGAFFQIAKAVEPITVCLAGDTRDSYSGADFHQGVQRIDAAEAMAFVRQRR 253 Query: 254 GLDNG---DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-ED 309 ++G D DRT RQQAFL S++ + G +++ L L+ VAR ++ + G D Sbjct: 254 DENDGSFTDFDRTRRQQAFLVSLVEAARSGGALSSVSGLRKLLQVARDNVAVDAGLDLMQ 313 Query: 310 LIRRMGELAGADIEFRTLPVVRY-DNIDGQDVNIVD-----PXXXXXXXXXXXXXXXXXX 363 R +LAG + TLP+ + + +G D+N+VD Sbjct: 314 FAARASQLAGRPLSLYTLPISGFGKDPNGSDINLVDLPTIRRIVNERFMSDAPAALDAAV 373 Query: 364 XXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYG 423 V+DVVNA + GLA+ + AL RG+T + ++I+YG Sbjct: 374 PGSQPPPAPAEPAVLDVVNATTHDGLAAALEEALAGRGFTRGSATTAPT-QAEDSSIEYG 432 Query: 424 PGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAY 483 PGA+A A L L + A Q +++ PG +++TV T F PA + Sbjct: 433 PGAEAAARLLADQLHLPATAQ--SAVAPGTVRLTVGTAF--PAADYLAHPGASGSGQVST 488 Query: 484 YNGGDDSSSYPAPDHGQPIDGGGVPCV 510 + PAP + VPCV Sbjct: 489 VSATGTGDHAPAPTDLSQMTATSVPCV 515 >tr|A0QMX7|A0QMX7_MYCA1 Tax_Id=243243 SubName: Full=Cell envelope-related transcriptional attenuator domain family protein;[Mycobacterium avium] Length = 516 Score = 241 bits (616), Expect = 1e-61 Identities = 180/507 (35%), Positives = 242/507 (47%), Gaps = 28/507 (5%) Query: 23 RTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRKDQ 82 R + ++ S + +TG G+ H AL I IS AL S G+N NILL+GLDSR DQ Sbjct: 18 RLVASVASAFVMAVTGVGWTGYHTALGRIIISHALP-NGAMSLGDNQNILLMGLDSRLDQ 76 Query: 83 EGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVS-ADGKVVAFSIPRDDWVPFTGVPGYN 141 G LP I LHAGD GGYN N LI+VH+S DG V A SIPRDD+ G PG Sbjct: 77 NGRPLPPEIYDALHAGDESSGGYNANVLIVVHLSDGDGPVTAVSIPRDDYAELPGCPGSV 136 Query: 142 HI-KIKEAYGLTKQYVAQELIDQ-------GVTSQRELETRGREXXXXXXXXXXXXXXXV 193 KIK+AYGL Q Q L Q G T E RE + Sbjct: 137 CAGKIKQAYGLAYQ---QSLNAQAAGNSGAGATDLAAREQTAREAGRKAEIGAVTDFLGI 193 Query: 194 PIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRH 253 +D+F EV L F+ +A+A+ + VCL DSYSGADF G QR+DAA+A+AFVRQR Sbjct: 194 SVDHFVEVTLGAFFQIAKAVEPITVCLAGDTRDSYSGADFHQGVQRIDAAEAMAFVRQRR 253 Query: 254 GLDNG---DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-ED 309 ++G D DRT RQQAFL S++ + G +++ L L+ VAR ++ + G D Sbjct: 254 DENDGSFTDFDRTRRQQAFLVSLVEAARSGGALSSVSGLRKLLQVARDNVAVDAGLDLMQ 313 Query: 310 LIRRMGELAGADIEFRTLPVVRY-DNIDGQDVNIVD-----PXXXXXXXXXXXXXXXXXX 363 R +LAG + TLP+ + + +G D+N+VD Sbjct: 314 FAARASQLAGRPLSLYTLPISGFGKDPNGSDINLVDLPAIRRIVNERFMSDAPAALDAAV 373 Query: 364 XXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYG 423 V+DVVNA + GLA+ V AL RG+T + ++I+YG Sbjct: 374 PGSQPPAAPAEPAVLDVVNATTHDGLAAAVEEALAGRGFTRGSATTAPT-QAEDSSIEYG 432 Query: 424 PGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAY 483 PGA+A A L L + A Q +++ PG +++TV F PA + Sbjct: 433 PGAEAAARLLADQLHLPATAQ--SAVAPGTVRLTVGAAF--PAADYLAHPGASGSGQVST 488 Query: 484 YNGGDDSSSYPAPDHGQPIDGGGVPCV 510 + PAP + VPCV Sbjct: 489 VSATGTGDHAPAPTDLSQMTATSVPCV 515 >tr|C7MUW6|C7MUW6_SACVD Tax_Id=471857 SubName: Full=Cell envelope-related function transcriptional attenuator common domain protein;[Saccharomonospora viridis] Length = 538 Score = 241 bits (614), Expect = 2e-61 Identities = 166/515 (32%), Positives = 242/515 (46%), Gaps = 33/515 (6%) Query: 23 RTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDP--RSTGNNMNILLIGLDSRK 80 RTL++L+SVV L +T G+ + A + + + ++P + +++ILL+G+DSR Sbjct: 29 RTLVSLLSVVVLALTAYGWQMIGTAQSNLATTDVFDDQEPGAKPLDGSVDILLVGIDSRT 88 Query: 81 DQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADG-KVVAFSIPRDDWVPFTGVPG 139 D +GN LP +L LHAG D+G T+T+ILVH+ DG A S PRD WV G G Sbjct: 89 DAQGNPLPQEVLDMLHAG-KDEGTKQTDTMILVHIPQDGTSATAISFPRDSWVELAG--G 145 Query: 140 YNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVP--IDY 197 Y ++ A+ + L+ QG T +E + P ID Sbjct: 146 YGTNRLNTAFRFAYNHTRNTLLAQGETDTEAIEKQAEAEGRKNLIATIEQLIGRPGMIDR 205 Query: 198 FAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDN 257 +AEVNLA FY++ +A+GG+EVCL ++ SG + PAGRQ ++ QALAFVRQR GL Sbjct: 206 YAEVNLASFYEITKAIGGIEVCLKQPAKEAKSGINLPAGRQTIEGVQALAFVRQRTGLPR 265 Query: 258 GDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGE 316 GDLDR +RQQAFLS + R + N RL +++ +K +V+S WD + +M Sbjct: 266 GDLDRINRQQAFLSGLARKMLSKEILLNPSRLSEVISAVQKSVVVSKDWDLLEFAHQMRN 325 Query: 317 LAGADIEFRTLPVVRYDNIDGQDVNIVDP---XXXXXXXXXXXXXXXXXXXXXXXXXXXX 373 L+G IEF T+PVV+ ++G V VDP Sbjct: 326 LSGGQIEFHTVPVVQDMYVNGASVLEVDPAQIRAFIDELVPRETEGDPRMDSVPQTVPGA 385 Query: 374 XXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPGAQADAMNL 433 V + NA + L L +G+ + +S +T I + PG QA L Sbjct: 386 EAYTVHIYNATADPSLGEATRTLLASQGFGGESY--AQSDPQNSTVIYHAPGEQAGVDAL 443 Query: 434 GTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKP----NAYYNGGDD 489 T LG+D Q D + PG + + + +F++P P +P + Y Sbjct: 444 RTALGVDFAAQADPQLAPGTLNLYLGGDFTLP-PTTQGAEGLTGVQPLRTGSVGYRAQQQ 502 Query: 490 S--------SSYPAPDHGQ------PIDGGGVPCV 510 S S P D G PI GGVPC+ Sbjct: 503 SDTGQSAPESGEPGTDEGSEDAEDGPITAGGVPCI 537 >tr|C6WRJ9|C6WRJ9_ACTMD Tax_Id=446462 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Actinosynnema mirum] Length = 340 Score = 238 bits (607), Expect = 1e-60 Identities = 140/311 (45%), Positives = 188/311 (60%), Gaps = 11/311 (3%) Query: 21 VSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRK 80 ++R + L+ L ++G + TG+ SQA+ + T +N+LLIGL +R+ Sbjct: 9 ITRLVWALLGAALLVVSGIAWTTYQEIDTGVRRSQAIAGGAEKPT-EWVNVLLIGLTTRR 67 Query: 81 DQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVS-ADGKVVAFSIPRDDWVPFTGVPG 139 D +G +L +HAGD D+GGYN NT+IL+ V A G +S+PRD+ G+PG Sbjct: 68 DLDGGAPSDEVLARMHAGDVDRGGYNANTMILLRVPLAGGAATGYSLPRDNEGELLGIPG 127 Query: 140 Y-NHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 KIKEAYG K +EL+ +GV ELE GRE VP+ Sbjct: 128 GPQRGKIKEAYGRAKDARERELVAEGVRDPAELEWLGREAGRRAQVETVSAFLDVPVHQL 187 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE++L GFY+LAQALGG++VCLN+A D YSGADFPAG QRLDAAQALAFVRQRHGL N Sbjct: 188 AELSLVGFYELAQALGGIDVCLNNATRDEYSGADFPAGPQRLDAAQALAFVRQRHGLPNS 247 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWDEDLIRRMGELA 318 DLDRT RQQAFL++V+ +++ G L L + VAR+ +VLS GW D++ +G+ Sbjct: 248 DLDRTRRQQAFLTAVLARVREQG----LTALGPAVEVARRTVVLSEGW--DVLEVLGKAP 301 Query: 319 GADIEFRTLPV 329 G F TLP+ Sbjct: 302 G--FAFSTLPI 310 >tr|C7Q249|C7Q249_CATAD Tax_Id=479433 SubName: Full=Cell envelope-related transcriptional attenuator; Flags: Precursor;[Catenulispora acidiphila] Length = 547 Score = 234 bits (598), Expect = 2e-59 Identities = 177/543 (32%), Positives = 243/543 (44%), Gaps = 45/543 (8%) Query: 12 RKPSPIRRRVSRTLMTLVSVVALGMTGAGY-WVAHGALTGITISQALTAED---PRSTGN 67 RKP I RV +++V V+A G G + G T +I+Q + GN Sbjct: 5 RKPGLIAGRVMAATLSVVVVLATGAVWFGNKQLTSGGHTTDSINQIKPGQQGYVAPHLGN 64 Query: 68 NMNILLIGLDSRKDQEGNDLPWSILK-HLHAGDSDQGGYNTNTLILVHVSADG-KVVAFS 125 ++N+LLIGLDSRKD GNDLP S+++ LHAG S G YNTN LIL+H+ A+G V A+S Sbjct: 65 DVNLLLIGLDSRKDMNGNDLPTSLVEGELHAGSSAIGYYNTNVLILMHIPANGGTVTAYS 124 Query: 126 IPRDDWVPFTG----VPGYNHI--------KIKEAYGLTKQYVAQELIDQGVTSQRELET 173 IPRD V G +PG + KIKEAYG K + +L G+ + + E Sbjct: 125 IPRDSDVERPGGPAAIPGLGTVQVPDMGKGKIKEAYGDAKNFADTKLAATGLKDKAKEEA 184 Query: 174 RGREXXXXXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAV-----DDSY 228 RE V +D+ AEVNL GFYD A+G ++VCL D + Sbjct: 185 ESREVGREATIRAVQNLTGVHVDHLAEVNLLGFYDTVNAIGNIQVCLKAPAYDPIEDGAG 244 Query: 229 SGADFPAGRQRLDAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDR 288 +G + PAG +DAA AL FVRQR L NGDLDRTHRQQAFL+SV + L+ G ++ Sbjct: 245 TGLNLPAGVSTIDAATALQFVRQRFHLPNGDLDRTHRQQAFLASVTQKLKQEGILNDIGS 304 Query: 289 LDSLMAVARKDLVLSGGWDE-DLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVDPXX 347 + L+ V + D+V+ GW D + L G + EF TLP I + VDP Sbjct: 305 MQKLLDVVKNDVVIDDGWSVLDFASQASNLTGGNAEFITLPTTGTVMIGTESALTVDPVA 364 Query: 348 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-------------VDVVNAGSISGLASQVS 394 + + N +GLA +VS Sbjct: 365 IKKTVTTAFTNDAAVAPPPTTASTAGSTPPPAPPSTTPTPQANISIENGTKTTGLALKVS 424 Query: 395 NALRKRGYTTDQVRDRKSGDPAATTIKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHI 454 AL G + + TTI+YG G +A A L LG +S+ G I Sbjct: 425 GALFDAGIPVSKT-GNGGNNVQHTTIRYGAGEEALAKQLQAKLGTKTAPTASSSVPKGSI 483 Query: 455 QVTVDTNFSMP---APXXXXXXXXXYPKPNAYYNGGDDSSSYPAPDHGQPID----GGGV 507 VT+ ++ +P P + D+S+ G +D G+ Sbjct: 484 VVTIGYDYKLPPAKTSTSTSTPKPGQPTSTSTSTSSDNSADSSGLSSGAAVDMSGSKNGI 543 Query: 508 PCV 510 PCV Sbjct: 544 PCV 546 >tr|Q6ACU9|Q6ACU9_LEIXX Tax_Id=59736 (lytR)SubName: Full=Transcriptional regulator, LytR family;[Leifsonia xyli subsp. xyli] Length = 428 Score = 227 bits (579), Expect = 2e-57 Identities = 140/352 (39%), Positives = 196/352 (55%), Gaps = 12/352 (3%) Query: 3 RTKARHRAVRKPSPIRRRVSRTLMTLVSVVALGMTGAGYWVAHGAL--TGITISQALTAE 60 R RHR + +R ++ +L T V V A G+ Y+ +L +G T++ + Sbjct: 19 RRPIRHRGAARRRRLRMLIAGSL-TAVLVAACGVAAYAYFDLTSSLHRSGFTLAGPSGSP 77 Query: 61 DPRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADG- 119 P G NIL++GLDSR DQ G+ LP + + +HAGD GGYN N L+L+H+ A+G Sbjct: 78 TPTPHGE-ANILVMGLDSRVDQNGDPLPRELYQAIHAGDQSDGGYNANVLMLIHLPANGG 136 Query: 120 KVVAFSIPRDDWVPFTGVP-GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREX 178 K V SIPRDD+ P +G P G KIKEAYGL+ + L QGV + Sbjct: 137 KAVGISIPRDDYAPLSGAPDGVRMSKIKEAYGLSLDENLRTLRKQGVARADAYQKARAAA 196 Query: 179 XXXXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQ 238 V ID+F E+ +A F +AQA+ + VCLNHA D YSGADFPAG Q Sbjct: 197 RQTQIRTVSDFLGGVRIDHFVEITMAAFERVAQAVQPITVCLNHATKDKYSGADFPAGVQ 256 Query: 239 RLDAAQALAFVRQRH-----GLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLM 293 ++AAQA++FVRQR L+ DLDRT RQQAF+ S+ L+ + TFT+L + L+ Sbjct: 257 EINAAQAMSFVRQRRDTGPSDLELTDLDRTRRQQAFILSLAHKLRRAETFTDLGTMQRLL 316 Query: 294 AVARKDLVLSGGWD-EDLIRRMGELAGADIEFRTLPVVRYDNIDGQDVNIVD 344 A++ + + G+D L+G + F+TLP+ R+ IDG+ VNIVD Sbjct: 317 DTAKQYIAVDDGFDLLSFASDAQRLSGGGLSFQTLPIARFATIDGKAVNIVD 368 >tr|C7QEE1|C7QEE1_CATAD Tax_Id=479433 SubName: Full=Cell envelope-related transcriptional attenuator;[Catenulispora acidiphila] Length = 664 Score = 227 bits (579), Expect = 2e-57 Identities = 149/363 (41%), Positives = 192/363 (52%), Gaps = 33/363 (9%) Query: 14 PSPIRRR------VSRTLMTLVSVVALGMTGAGYWVAHGALT-GITISQALTAEDPRSTG 66 P P RRR V+R L S A+ + A W + LT G+ S A+ G Sbjct: 55 PEPPRRRRRRATIVARALACTTSA-AIVLASAAIWAEYHNLTSGLLTSNAINEIRSGEKG 113 Query: 67 -------NNMNILLIGLDSRKDQEGNDLPWSILKH-LHAGDSDQGGYNTNTLILVHVSAD 118 ++N+LLIGLDSRKD GNDLP ++ LHAG S+ GGYN N LI +H+ AD Sbjct: 114 YVAPHLDGSVNLLLIGLDSRKDMNGNDLPTDFVEQELHAGSSEIGGYNANVLIFLHIPAD 173 Query: 119 G-KVVAFSIPRDDWVPFTG-------VPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRE 170 G +V AFSI RDD+V G +P KIKEAYG K L G+T Q + Sbjct: 174 GGRVTAFSIARDDYVEEPGGSSAVGDIPDLGMHKIKEAYGRAKAIAVDRLKASGMTDQAQ 233 Query: 171 LETRGREXXXXXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSY-- 228 +E RE +D+ AE+NL GFYD+AQA+G +EVCLNH V+D Sbjct: 234 IEKVSREVGRESTIRAVQLLTGEHVDHLAEINLLGFYDVAQAVGPIEVCLNHPVNDPIED 293 Query: 229 ---SGADFPAGRQRLDAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTN 285 +G PAG LDAA AL FVRQR L GD DR RQQAFL++VM L+ G + Sbjct: 294 GAGTGLKLPAGHSMLDAATALQFVRQRFHLLRGDFDRNRRQQAFLAAVMHKLKSEGVIGD 353 Query: 286 LDRLDSLMAVARKDLVLSGGWDE-DLIRRMGELAGADIEFRTLPVVRYDNI--DGQDVNI 342 L ++ +L V +KD+V+ WD D R L G + +FR LP+ + DG VN Sbjct: 354 LGKMQALFDVVKKDVVIDDSWDVLDFADRAQNLTGGNADFRELPITGQPVLPADG-SVNT 412 Query: 343 VDP 345 V+P Sbjct: 413 VNP 415 Score = 48.9 bits (115), Expect = 0.002 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%) Query: 377 VVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPGAQADAMNLGTL 436 VVD+ NA + +GLA+ V + L G+ D+ + + TTI YG GA A L Sbjct: 520 VVDLYNATARNGLATTVGDWLAASGWPVDKTAGAAA--QSRTTILYGKGAAKAAGQLAAA 577 Query: 437 LGIDAPKQPDASIEPGHIQVTVDTNFSMP 465 LG+ A P A GH+ + + +++ P Sbjct: 578 LGVQALPAPSARTAAGHVLIRLGADYTPP 606 >tr|Q5YQQ1|Q5YQQ1_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 495 Score = 226 bits (576), Expect = 5e-57 Identities = 159/453 (35%), Positives = 230/453 (50%), Gaps = 35/453 (7%) Query: 69 MNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIP 127 ++ILL+G+DSR D G+ L LHAGD + G NT+T++LV V DG A S+P Sbjct: 68 VDILLVGVDSRTDAHGDPLSEDEKAMLHAGD--EVGTNTDTIVLVRVPNDGSSATAISLP 125 Query: 128 RDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXX 187 RD +V +PG KI AYG+TK+ +L+DQGV S+ E E R Sbjct: 126 RDSYVD---IPGLGKGKINSAYGVTKETERLKLLDQGV-SEAEAEKRSTRAGRQALIKTV 181 Query: 188 XXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALA 247 + +D++AEV+L GF L A+GGVEVCLN+ VD+ SGA FPAGRQRLD QAL+ Sbjct: 182 ADLTGITVDHYAEVSLLGFVLLTDAVGGVEVCLNNPVDEWMSGARFPAGRQRLDGPQALS 241 Query: 248 FVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD 307 FVRQRH L GDLDR RQQ F++ ++ + + T +N ++L+ L + +VL WD Sbjct: 242 FVRQRHDLPRGDLDRIVRQQVFMAQLVNQVLSAKTLSNPNKLNELSDAVGRTVVLDENWD 301 Query: 308 E-DLIRRMGELAGADIEFRTLPVVRYDNI--DGQDVNIVDPXXXXXXXXXXXXXXXXXXX 364 ++++ +L+G ++F T+PV + + +G+ V V+P Sbjct: 302 VLAFLQQLRDLSGGQVKFETIPVADLNGMTSNGESVVRVEP---KEVKSYVAGLVGEDAD 358 Query: 365 XXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRK----SGDPAATTI 420 VDV NA S+ GLA QVS AL +G+ +V + +G Sbjct: 359 EPQSPRVDPSTVTVDVFNASSVGGLAGQVSQALAGKGFQPGRVGNYSGAGVTGSRVLAAD 418 Query: 421 KYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKP 480 PGA+A A LG L + D+S+ P + V + +++S P Sbjct: 419 TSNPGAEAVAEALGGLTVV-----ADSSMSPDAVSVVLASDYSGPGSAAG---------- 463 Query: 481 NAYYNGGDDSSSYPAPDHGQPIDGG--GVPCVN 511 + + G +S+ P P PID G G CVN Sbjct: 464 SLFDFSGTSTSATPVPP-APPIDAGQNGPKCVN 495 >tr|C6WJ74|C6WJ74_ACTMD Tax_Id=446462 SubName: Full=Cell envelope-related transcriptional attenuator;[Actinosynnema mirum] Length = 517 Score = 219 bits (559), Expect = 5e-55 Identities = 176/519 (33%), Positives = 244/519 (47%), Gaps = 54/519 (10%) Query: 23 RTLMTLVSVVALGMTGAGYWVAHGALTGITIS----QALTAEDPRSTGNNMN----ILLI 74 RTL+ LVS L +T G+ G+T + +A + P ST ++ ILL+ Sbjct: 23 RTLVALVSAAVLVVTWYGWHQLRTLNQGVTTTDVFGEASSTVSPESTRKPLDGAIDILLV 82 Query: 75 GLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADG-KVVAFSIPRDDWVP 133 G DSR D +G L +L L+ G D+G NT+T+ILVHV DG + VA S PRD +V Sbjct: 83 GSDSRTDAQGKPLSDEVLALLNGG-VDEGTLNTDTIILVHVPQDGTRAVAISFPRDAYVE 141 Query: 134 FTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVT--SQRELETRGREXXXXXXXXXXXXXX 191 G+ KI A K + EL +G T ++ ELE+ Sbjct: 142 IAD--GFGKHKINSALIRQKNTTSAELQAKGETDLAKIELESTLAGRRTLIKTIEDLSGG 199 Query: 192 XVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSY-SGADFPAGRQRLDAAQALAFVR 250 + ID +AEVNLA FY++ QA+GGVEVCLN+ VDD Y SGA FPAG Q L+ QAL FVR Sbjct: 200 AIKIDRYAEVNLASFYEVTQAIGGVEVCLNNPVDDEYYSGAKFPAGVQTLEGRQALQFVR 259 Query: 251 QRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-ED 309 QRH L NGDLDR RQQ F+ ++ R + +GT T+ RL L+ +K +VLS GWD + Sbjct: 260 QRHELPNGDLDRIVRQQVFIGALARKVLSTGTLTDPARLSGLVGAVQKSVVLSQGWDITE 319 Query: 310 LIRRMGELAGADIEFRTLPV----VRYDN-----IDGQDVN-IVDPXXXXXXXXXXXXXX 359 +M LA +EFRT+PV Y + +D +V + Sbjct: 320 FASQMQGLASGKLEFRTIPVGPPTDTYSDGNVLPVDAAEVKAFLGDLASDKPKPSTSPSG 379 Query: 360 XXXXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATT 419 V V N+ +SG+A +V NAL +G+ Q + D T Sbjct: 380 SPSGSPSPSAGPQPSAITVQVYNSSGVSGVALKVLNALGDQGFRKGQALNSAVSD--TTV 437 Query: 420 IKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPK 479 ++YG G +A A + LG +A + D S+ G + + V + Sbjct: 438 VRYGTGQEAYADRVVQALGGNATTELDDSVPRGQVLIYVGAD------------------ 479 Query: 480 PNAYYNGGDDSSSYPA-------PDHGQPIDGGGVPCVN 511 NA DD+SS + PI GV CV+ Sbjct: 480 -NAELGTTDDTSSARSETGSSSPASSAAPITANGVVCVD 517 >tr|B1MET0|B1MET0_MYCA9 Tax_Id=561007 SubName: Full=Putative uncharacterized protein;[Mycobacterium abscessus] Length = 508 Score = 219 bits (557), Expect = 9e-55 Identities = 165/507 (32%), Positives = 235/507 (46%), Gaps = 30/507 (5%) Query: 29 VSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRKDQEGNDLP 88 V+ + +TG G W + G I+ + G + NILL+GLDSR DQ G LP Sbjct: 6 VAAFVMAITGFG-WAGYNTAVGQIITSHVLPGVLTPVGQDQNILLMGLDSRLDQNGQPLP 64 Query: 89 WSILKHLHAGDSDQGGYNTNTLILVHVSADG-KVVAFSIPRDDWVPFTGVPG-YNHIKIK 146 + LHAGD GGYN N LI+VH+ +G + A SIPRDD+V G PG K+K Sbjct: 65 QDMYDALHAGDETSGGYNANVLIVVHIPGNGGPISAVSIPRDDYVNLVGCPGSVCKGKVK 124 Query: 147 EAYGLTKQYV--AQELIDQGVTSQRELETR---GREXXXXXXXXXXXXXXXVPIDYFAEV 201 +AYG Q AQ ++L R RE V ID+F EV Sbjct: 125 QAYGFAYQQALDAQANGSADAAGAKDLTAREQAAREAGRKAQIDTVSEFLGVQIDHFVEV 184 Query: 202 NLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG--- 258 LA F+ +A+ + + VCLNH D +SGA+F G Q++DA+QA+AFVRQR ++G Sbjct: 185 TLAAFFQIAKTVQPIAVCLNHDTIDEFSGANFHEGVQQIDASQAMAFVRQRRDENDGSFT 244 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 D+DRT RQQAFL S++ ++ G +N + +++ VA +++ + G + D R EL Sbjct: 245 DMDRTRRQQAFLVSLLAAVRQGGAMSNPAAIRNILNVAHENVAIDSGLNIVDFAARASEL 304 Query: 318 AGADIEFRTLPVVRYD-NIDGQDVNIVD----PXXXXXXXXXXXXXXXXXXXXXXXXXXX 372 F TLP+ + + +G DVNIVD Sbjct: 305 TKRPTSFYTLPISDFGADSNGSDVNIVDLPTIRQIVHDRFSSDPVPEAPSAAAASAPPAL 364 Query: 373 XXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPGAQADAMN 432 V++VVNA S GLA+ V +A RG+T + ++ ++I YG AQ A Sbjct: 365 STPVVLNVVNATSRDGLAAAVEDAFTARGFTRGRASTAET-QSTESSIMYGEDAQEGAQA 423 Query: 433 LGTLLGIDAPKQPDASIEPGHIQVTVDTNF---------SMPAPXXXXXXXXXYPKPNAY 483 L L + P ++ PG +Q+TV + F S A K A Sbjct: 424 LADQLHL--PMTESGAVAPGTVQLTVGSQFPVDNYIAHHSGGAKGGSSGEADPADKMTAV 481 Query: 484 YNGGDDSSSYPAPDHGQPIDGGGVPCV 510 G + PAP + G+PCV Sbjct: 482 AATGTGVQA-PAPTDLSQLTANGIPCV 507 >tr|C3JG80|C3JG80_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, LytR family;[Rhodococcus erythropolis SK121] Length = 510 Score = 218 bits (555), Expect = 1e-54 Identities = 163/521 (31%), Positives = 249/521 (47%), Gaps = 21/521 (4%) Query: 1 MGRTKARHRAVRKPSPIRRRVS--RTLMTLVSVVALGMTGAGYWVAHGALTGITISQALT 58 M + + RA +P+PIR + S R + ++SV+ L +TG + + + L Sbjct: 1 MSHQQPQRRARPRPAPIRTKTSPARIAVAVLSVLVLLVTGFAWRGVDSLRNSLATASGLG 60 Query: 59 AEDPRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSAD 118 + ++IL++G DSR D GN L S L L AG+ + NT+T+IL+ V D Sbjct: 61 LGGGKDGA--IDILMVGTDSRTDAHGNPLSQSELDSLRAGE--EVASNTDTIILIRVPND 116 Query: 119 GK-VVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGRE 177 G A SIPRD +V VPG KI A+G TK+ +L++ G +S + + + E Sbjct: 117 GSSATAISIPRDAYV---NVPGIGMSKINAAFGATKETERLKLVNNG-SSDSDADKKSTE 172 Query: 178 XXXXXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGR 237 + +D++AEV L GF L A+GGV+VCLN VD+ SGA+F AG+ Sbjct: 173 AGRTALIGAVANLTGITVDHYAEVGLLGFVLLTNAVGGVDVCLNAPVDEPMSGANFAAGK 232 Query: 238 QRLDAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVAR 297 Q LD A AL+FVRQRH L GDLDR RQQ F++S++ + + T ++ +L L + + Sbjct: 233 QTLDGADALSFVRQRHDLPRGDLDRIVRQQVFMASLVSKVLSAKTLSDPGKLSQLTSAVQ 292 Query: 298 KDLVLSGGWD-EDLIRRMGELAGADIEFRTLPVVRYDNID--GQDVNIVDP--XXXXXXX 352 + +V+ WD + +++ LAG ++F T+PV+ + + G+ + VDP Sbjct: 293 RSVVIDDDWDIIEFAKQLQNLAGGKVQFETIPVLDINGMTDYGESIVKVDPKAVKKYIAG 352 Query: 353 XXXXXXXXXXXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKS 412 VDV NA I+GLAS VS AL GY QV + Sbjct: 353 LVGADSEDSDETSEAPTTVNASSITVDVANASDIAGLASGVSEALSALGYKQGQVGNNTG 412 Query: 413 GDPAATTIKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXX 472 D +T+ A+ + LG + D+S+ G ++V + ++S P Sbjct: 413 SDVTESTVFAKSADDDAALAVAEALG-GLTVKADSSLSSGKVRVVIAEDYSGPQSADAVS 471 Query: 473 XXXXYPKPNAYYNGGDDSSSYPAPDHGQPID--GGGVPCVN 511 + ++S PAP G PID G CVN Sbjct: 472 PPEG-ATSTTESSSTTETSPTPAPP-GPPIDAASNGPRCVN 510 >tr|Q7TWU9|Q7TWU9_MYCBO Tax_Id=1765 SubName: Full=Putative uncharacterized protein Mb3295;[Mycobacterium bovis] Length = 498 Score = 218 bits (554), Expect = 2e-54 Identities = 164/501 (32%), Positives = 230/501 (45%), Gaps = 23/501 (4%) Query: 20 RVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSR 79 R +R + T ++V + TG + GI A + G ++ILL+GLDSR Sbjct: 12 RTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGA-IDILLVGLDSR 70 Query: 80 KDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVP 138 D GN L L LHAGD + NT+T+IL+ V +GK A SIPRD +V P Sbjct: 71 TDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYV---AAP 125 Query: 139 GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 G KI YG T++ L+ G S E G E V +D++ Sbjct: 126 GLGKTKINGVYGQTRETKRAGLVQAGA-SPTEAAAAGTEAGREALIKTVADLTGVTVDHY 184 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE+ L GF +A ALGGV+VCL V + SGADFPAGRQ+L+ QAL+FVRQRH L G Sbjct: 185 AEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPRG 244 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 DLDR RQQA ++++ + T ++ L L ++ +VLS GWD D +R++ +L Sbjct: 245 DLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKL 304 Query: 318 AGADIEFRTLPVV---RYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 AG ++ F T+PV+ + + Q V VDP Sbjct: 305 AGGNVAFATIPVLDGAGWSDDGMQSVVRVDP--RQVQDWVVGLLHEQDQGKTDELAYTPA 362 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP----GAQADA 430 +VVN I+GLA+ VS L +G+TT V + + ++ GAQ A Sbjct: 363 KTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQVA 422 Query: 431 MNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDS 490 LG L P DASI PG ++V + ++S P P +N G Sbjct: 423 KELGGL-----PVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSAD 477 Query: 491 SSYPAPDHGQPIDGGGVPCVN 511 + P P C+N Sbjct: 478 DTTPPPSPILTAGSDAPECIN 498 >tr|P96872|P96872_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 498 Score = 218 bits (554), Expect = 2e-54 Identities = 164/501 (32%), Positives = 230/501 (45%), Gaps = 23/501 (4%) Query: 20 RVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSR 79 R +R + T ++V + TG + GI A + G ++ILL+GLDSR Sbjct: 12 RTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGA-IDILLVGLDSR 70 Query: 80 KDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVP 138 D GN L L LHAGD + NT+T+IL+ V +GK A SIPRD +V P Sbjct: 71 TDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYV---AAP 125 Query: 139 GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 G KI YG T++ L+ G S E G E V +D++ Sbjct: 126 GLGKTKINGVYGQTRETKRAGLVQAGA-SPTEAAAAGTEAGREALIKTVADLTGVTVDHY 184 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE+ L GF +A ALGGV+VCL V + SGADFPAGRQ+L+ QAL+FVRQRH L G Sbjct: 185 AEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPRG 244 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 DLDR RQQA ++++ + T ++ L L ++ +VLS GWD D +R++ +L Sbjct: 245 DLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKL 304 Query: 318 AGADIEFRTLPVV---RYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 AG ++ F T+PV+ + + Q V VDP Sbjct: 305 AGGNVAFATIPVLDGAGWSDDGMQSVVRVDP--RQVQDWVVGLLHEQDQGKTDELAYTPA 362 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP----GAQADA 430 +VVN I+GLA+ VS L +G+TT V + + ++ GAQ A Sbjct: 363 KTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQVA 422 Query: 431 MNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDS 490 LG L P DASI PG ++V + ++S P P +N G Sbjct: 423 KELGGL-----PVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSAD 477 Query: 491 SSYPAPDHGQPIDGGGVPCVN 511 + P P C+N Sbjct: 478 DTTPPPSPILTAGSDAPECIN 498 >tr|C6DL04|C6DL04_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 498 Score = 218 bits (554), Expect = 2e-54 Identities = 164/501 (32%), Positives = 230/501 (45%), Gaps = 23/501 (4%) Query: 20 RVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSR 79 R +R + T ++V + TG + GI A + G ++ILL+GLDSR Sbjct: 12 RTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGA-IDILLVGLDSR 70 Query: 80 KDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVP 138 D GN L L LHAGD + NT+T+IL+ V +GK A SIPRD +V P Sbjct: 71 TDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYV---AAP 125 Query: 139 GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 G KI YG T++ L+ G S E G E V +D++ Sbjct: 126 GLGKTKINGVYGQTRETKRAGLVQAGA-SPTEAAAAGTEAGREALIKTVADLTGVTVDHY 184 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE+ L GF +A ALGGV+VCL V + SGADFPAGRQ+L+ QAL+FVRQRH L G Sbjct: 185 AEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPRG 244 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 DLDR RQQA ++++ + T ++ L L ++ +VLS GWD D +R++ +L Sbjct: 245 DLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKL 304 Query: 318 AGADIEFRTLPVV---RYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 AG ++ F T+PV+ + + Q V VDP Sbjct: 305 AGGNVAFATIPVLDGAGWSDDGMQSVVRVDP--RQVQDWVVGLLHEQDQGKTDELAYTPA 362 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP----GAQADA 430 +VVN I+GLA+ VS L +G+TT V + + ++ GAQ A Sbjct: 363 KTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQVA 422 Query: 431 MNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDS 490 LG L P DASI PG ++V + ++S P P +N G Sbjct: 423 KELGGL-----PVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSAD 477 Query: 491 SSYPAPDHGQPIDGGGVPCVN 511 + P P C+N Sbjct: 478 DTTPPPSPILTAGSDAPECIN 498 >tr|C1AH41|C1AH41_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 498 Score = 218 bits (554), Expect = 2e-54 Identities = 164/501 (32%), Positives = 230/501 (45%), Gaps = 23/501 (4%) Query: 20 RVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSR 79 R +R + T ++V + TG + GI A + G ++ILL+GLDSR Sbjct: 12 RTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGA-IDILLVGLDSR 70 Query: 80 KDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVP 138 D GN L L LHAGD + NT+T+IL+ V +GK A SIPRD +V P Sbjct: 71 TDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYV---AAP 125 Query: 139 GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 G KI YG T++ L+ G S E G E V +D++ Sbjct: 126 GLGKTKINGVYGQTRETKRAGLVQAGA-SPTEAAAAGTEAGREALIKTVADLTGVTVDHY 184 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE+ L GF +A ALGGV+VCL V + SGADFPAGRQ+L+ QAL+FVRQRH L G Sbjct: 185 AEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPRG 244 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 DLDR RQQA ++++ + T ++ L L ++ +VLS GWD D +R++ +L Sbjct: 245 DLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKL 304 Query: 318 AGADIEFRTLPVV---RYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 AG ++ F T+PV+ + + Q V VDP Sbjct: 305 AGGNVAFATIPVLDGAGWSDDGMQSVVRVDP--RQVQDWVVGLLHEQDQGKTDELAYTPA 362 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP----GAQADA 430 +VVN I+GLA+ VS L +G+TT V + + ++ GAQ A Sbjct: 363 KTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQVA 422 Query: 431 MNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDS 490 LG L P DASI PG ++V + ++S P P +N G Sbjct: 423 KELGGL-----PVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSAD 477 Query: 491 SSYPAPDHGQPIDGGGVPCVN 511 + P P C+N Sbjct: 478 DTTPPPSPILTAGSDAPECIN 498 >tr|A5U7U1|A5U7U1_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 498 Score = 218 bits (554), Expect = 2e-54 Identities = 164/501 (32%), Positives = 230/501 (45%), Gaps = 23/501 (4%) Query: 20 RVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSR 79 R +R + T ++V + TG + GI A + G ++ILL+GLDSR Sbjct: 12 RTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGA-IDILLVGLDSR 70 Query: 80 KDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVP 138 D GN L L LHAGD + NT+T+IL+ V +GK A SIPRD +V P Sbjct: 71 TDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYV---AAP 125 Query: 139 GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 G KI YG T++ L+ G S E G E V +D++ Sbjct: 126 GLGKTKINGVYGQTRETKRAGLVQAGA-SPTEAAAAGTEAGREALIKTVADLTGVTVDHY 184 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE+ L GF +A ALGGV+VCL V + SGADFPAGRQ+L+ QAL+FVRQRH L G Sbjct: 185 AEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPRG 244 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 DLDR RQQA ++++ + T ++ L L ++ +VLS GWD D +R++ +L Sbjct: 245 DLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKL 304 Query: 318 AGADIEFRTLPVV---RYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 AG ++ F T+PV+ + + Q V VDP Sbjct: 305 AGGNVAFATIPVLDGAGWSDDGMQSVVRVDP--RQVQDWVVGLLHEQDQGKTDELAYTPA 362 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP----GAQADA 430 +VVN I+GLA+ VS L +G+TT V + + ++ GAQ A Sbjct: 363 KTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQVA 422 Query: 431 MNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDS 490 LG L P DASI PG ++V + ++S P P +N G Sbjct: 423 KELGGL-----PVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSAD 477 Query: 491 SSYPAPDHGQPIDGGGVPCVN 511 + P P C+N Sbjct: 478 DTTPPPSPILTAGSDAPECIN 498 >tr|A1KNR9|A1KNR9_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_3296;[Mycobacterium bovis] Length = 498 Score = 218 bits (554), Expect = 2e-54 Identities = 164/501 (32%), Positives = 230/501 (45%), Gaps = 23/501 (4%) Query: 20 RVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSR 79 R +R + T ++V + TG + GI A + G ++ILL+GLDSR Sbjct: 12 RTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGA-IDILLVGLDSR 70 Query: 80 KDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVP 138 D GN L L LHAGD + NT+T+IL+ V +GK A SIPRD +V P Sbjct: 71 TDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYV---AAP 125 Query: 139 GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 G KI YG T++ L+ G S E G E V +D++ Sbjct: 126 GLGKTKINGVYGQTRETKRAGLVQAGA-SPTEAAAAGTEAGREALIKTVADLTGVTVDHY 184 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE+ L GF +A ALGGV+VCL V + SGADFPAGRQ+L+ QAL+FVRQRH L G Sbjct: 185 AEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPRG 244 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 DLDR RQQA ++++ + T ++ L L ++ +VLS GWD D +R++ +L Sbjct: 245 DLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKL 304 Query: 318 AGADIEFRTLPVV---RYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 AG ++ F T+PV+ + + Q V VDP Sbjct: 305 AGGNVAFATIPVLDGAGWSDDGMQSVVRVDP--RQVQDWVVGLLHEQDQGKTDELAYTPA 362 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP----GAQADA 430 +VVN I+GLA+ VS L +G+TT V + + ++ GAQ A Sbjct: 363 KTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQVA 422 Query: 431 MNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDS 490 LG L P DASI PG ++V + ++S P P +N G Sbjct: 423 KELGGL-----PVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSAD 477 Query: 491 SSYPAPDHGQPIDGGGVPCVN 511 + P P C+N Sbjct: 478 DTTPPPSPILTAGSDAPECIN 498 >tr|Q7D5T0|Q7D5T0_MYCTU Tax_Id=1773 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 497 Score = 218 bits (554), Expect = 2e-54 Identities = 164/501 (32%), Positives = 230/501 (45%), Gaps = 23/501 (4%) Query: 20 RVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSR 79 R +R + T ++V + TG + GI A + G ++ILL+GLDSR Sbjct: 11 RTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGA-IDILLVGLDSR 69 Query: 80 KDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVP 138 D GN L L LHAGD + NT+T+IL+ V +GK A SIPRD +V P Sbjct: 70 TDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYV---AAP 124 Query: 139 GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 G KI YG T++ L+ G S E G E V +D++ Sbjct: 125 GLGKTKINGVYGQTRETKRAGLVQAGA-SPTEAAAAGTEAGREALIKTVADLTGVTVDHY 183 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE+ L GF +A ALGGV+VCL V + SGADFPAGRQ+L+ QAL+FVRQRH L G Sbjct: 184 AEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPRG 243 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 DLDR RQQA ++++ + T ++ L L ++ +VLS GWD D +R++ +L Sbjct: 244 DLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKL 303 Query: 318 AGADIEFRTLPVV---RYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 AG ++ F T+PV+ + + Q V VDP Sbjct: 304 AGGNVAFATIPVLDGAGWSDDGMQSVVRVDP--RQVQDWVVGLLHEQDQGKTDELAYTPA 361 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP----GAQADA 430 +VVN I+GLA+ VS L +G+TT V + + ++ GAQ A Sbjct: 362 KTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQVA 421 Query: 431 MNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDS 490 LG L P DASI PG ++V + ++S P P +N G Sbjct: 422 KELGGL-----PVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSAD 476 Query: 491 SSYPAPDHGQPIDGGGVPCVN 511 + P P C+N Sbjct: 477 DTTPPPSPILTAGSDAPECIN 497 >tr|A5WSI2|A5WSI2_MYCTF Tax_Id=336982 SubName: Full=Conserved CPSA-related protein;[Mycobacterium tuberculosis] Length = 497 Score = 218 bits (554), Expect = 2e-54 Identities = 164/501 (32%), Positives = 230/501 (45%), Gaps = 23/501 (4%) Query: 20 RVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSR 79 R +R + T ++V + TG + GI A + G ++ILL+GLDSR Sbjct: 11 RTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGA-IDILLVGLDSR 69 Query: 80 KDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVP 138 D GN L L LHAGD + NT+T+IL+ V +GK A SIPRD +V P Sbjct: 70 TDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYV---AAP 124 Query: 139 GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 G KI YG T++ L+ G S E G E V +D++ Sbjct: 125 GLGKTKINGVYGQTRETKRAGLVQAGA-SPTEAAAAGTEAGREALIKTVADLTGVTVDHY 183 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE+ L GF +A ALGGV+VCL V + SGADFPAGRQ+L+ QAL+FVRQRH L G Sbjct: 184 AEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPRG 243 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 DLDR RQQA ++++ + T ++ L L ++ +VLS GWD D +R++ +L Sbjct: 244 DLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKL 303 Query: 318 AGADIEFRTLPVV---RYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 AG ++ F T+PV+ + + Q V VDP Sbjct: 304 AGGNVAFATIPVLDGAGWSDDGMQSVVRVDP--RQVQDWVVGLLHEQDQGKTDELAYTPA 361 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP----GAQADA 430 +VVN I+GLA+ VS L +G+TT V + + ++ GAQ A Sbjct: 362 KTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQVA 421 Query: 431 MNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDS 490 LG L P DASI PG ++V + ++S P P +N G Sbjct: 422 KELGGL-----PVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSAD 476 Query: 491 SSYPAPDHGQPIDGGGVPCVN 511 + P P C+N Sbjct: 477 DTTPPPSPILTAGSDAPECIN 497 >tr|A4KLG3|A4KLG3_MYCTU Tax_Id=395095 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis str. Haarlem] Length = 497 Score = 218 bits (554), Expect = 2e-54 Identities = 164/501 (32%), Positives = 230/501 (45%), Gaps = 23/501 (4%) Query: 20 RVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSR 79 R +R + T ++V + TG + GI A + G ++ILL+GLDSR Sbjct: 11 RTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGA-IDILLVGLDSR 69 Query: 80 KDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVP 138 D GN L L LHAGD + NT+T+IL+ V +GK A SIPRD +V P Sbjct: 70 TDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYV---AAP 124 Query: 139 GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 G KI YG T++ L+ G S E G E V +D++ Sbjct: 125 GLGKTKINGVYGQTRETKRAGLVQAGA-SPTEAAAAGTEAGREALIKTVADLTGVTVDHY 183 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE+ L GF +A ALGGV+VCL V + SGADFPAGRQ+L+ QAL+FVRQRH L G Sbjct: 184 AEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPRG 243 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 DLDR RQQA ++++ + T ++ L L ++ +VLS GWD D +R++ +L Sbjct: 244 DLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKL 303 Query: 318 AGADIEFRTLPVV---RYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 AG ++ F T+PV+ + + Q V VDP Sbjct: 304 AGGNVAFATIPVLDGAGWSDDGMQSVVRVDP--RQVQDWVVGLLHEQDQGKTDELAYTPA 361 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP----GAQADA 430 +VVN I+GLA+ VS L +G+TT V + + ++ GAQ A Sbjct: 362 KTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQVA 421 Query: 431 MNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDS 490 LG L P DASI PG ++V + ++S P P +N G Sbjct: 422 KELGGL-----PVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSAD 476 Query: 491 SSYPAPDHGQPIDGGGVPCVN 511 + P P C+N Sbjct: 477 DTTPPPSPILTAGSDAPECIN 497 >tr|A2VP63|A2VP63_MYCTU Tax_Id=348776 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis C] Length = 498 Score = 218 bits (554), Expect = 2e-54 Identities = 164/501 (32%), Positives = 230/501 (45%), Gaps = 23/501 (4%) Query: 20 RVSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSR 79 R +R + T ++V + TG + GI A + G ++ILL+GLDSR Sbjct: 12 RTARAISTALAVAIVLGTGVAWSSVRSFEDGIFHMSAPSLGHGGDDGA-IDILLVGLDSR 70 Query: 80 KDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGK-VVAFSIPRDDWVPFTGVP 138 D GN L L LHAGD + NT+T+IL+ V +GK A SIPRD +V P Sbjct: 71 TDAHGNPLSAEELATLHAGDEE--ATNTDTIILIRVPNNGKSATAISIPRDSYV---AAP 125 Query: 139 GYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXVPIDYF 198 G KI YG T++ L+ G S E G E V +D++ Sbjct: 126 GLGKTKINGVYGQTRETKRAGLVQAGA-SPTEAAAAGTEAGREALIKTVADLTGVTVDHY 184 Query: 199 AEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRHGLDNG 258 AE+ L GF +A ALGGV+VCL V + SGADFPAGRQ+L+ QAL+FVRQRH L G Sbjct: 185 AEIGLLGFALIADALGGVDVCLKEPVYEPLSGADFPAGRQKLNGPQALSFVRQRHDLPRG 244 Query: 259 DLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIRRMGEL 317 DLDR RQQA ++++ + T ++ L L ++ +VLS GWD D +R++ +L Sbjct: 245 DLDRVVRQQAVMAALAHRVISGQTLSSPATLKRLEQAVQRSVVLSSGWDIMDFVRQLQKL 304 Query: 318 AGADIEFRTLPVV---RYDNIDGQDVNIVDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 374 AG ++ F T+PV+ + + Q V VDP Sbjct: 305 AGGNVAFATIPVLDGAGWSDDGMQSVVRVDP--RQVQDWVVGLLHEQDQGKTDELAYTPA 362 Query: 375 XXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGP----GAQADA 430 +VVN I+GLA+ VS L +G+TT V + + ++ GAQ A Sbjct: 363 KTTANVVNDTDINGLAAAVSKVLSSKGFTTGSVGNNDGDHVPGSQVRAAKADDLGAQQVA 422 Query: 431 MNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYPKPNAYYNGGDDS 490 LG L P DASI PG ++V + ++S P P +N G Sbjct: 423 KELGGL-----PVVADASIAPGSVRVVLANDYSGPGSGLGGSDPNGVVSPARAFNLGSAD 477 Query: 491 SSYPAPDHGQPIDGGGVPCVN 511 + P P C+N Sbjct: 478 DTTPPPSPILTAGSDAPECIN 498 >tr|Q8NSD6|Q8NSD6_CORGL Tax_Id=1718 SubName: Full=Transcriptional regulator; SubName: Full=Putative transcriptional regulator;[Corynebacterium glutamicum] Length = 518 Score = 217 bits (552), Expect = 3e-54 Identities = 166/537 (30%), Positives = 253/537 (47%), Gaps = 54/537 (10%) Query: 7 RHRAVR--KPSPIRRR--------VSRTLMTLVSVVALGMTGAGYWVAHGALTGIT---- 52 ++R VR KP+P + V R+++ VSV+ L ++G GY +A G + G+ Sbjct: 4 KYRPVRDIKPAPAAMQSTKQAGHPVFRSVVAFVSVLVLLVSGLGY-LAVGKVDGVASGNL 62 Query: 53 -ISQALTAEDPRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLI 111 + +D + +ILL+G DSR D +GN L L L AGD + NT+T++ Sbjct: 63 NLGGGRGIQDGNAADGATDILLVGSDSRSDAQGNTLTEEELAMLRAGDEEND--NTDTIM 120 Query: 112 LVHVSADGK-VVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRE 170 ++ V DG A SIPRD ++ Y ++KI YG K EL++QG T++ E Sbjct: 121 VIRVPNDGSSATAVSIPRDTYIHDDD---YGNMKINGVYGAYKDARRAELMEQGFTNESE 177 Query: 171 LETRGREXXXXXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSG 230 LETR ++ + +D++AEV L GF L A+GGVEVCLN+AVD+ SG Sbjct: 178 LETRAKDAGREGLIDAVSDLTGITVDHYAEVGLLGFVLLTDAVGGVEVCLNNAVDEPLSG 237 Query: 231 ADFPAGRQRLDAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLD 290 A+FPAGRQ L + AL++VRQRH L GDLDR RQQ++++S++ + SGT TN +L Sbjct: 238 ANFPAGRQTLGGSDALSYVRQRHDLPRGDLDRIVRQQSYMASLVNQVLSSGTLTNPAKLS 297 Query: 291 SLMAVARKDLVLSGGWD-EDLIRRMGELAGADIEFRTLPVVRYD-------NIDGQDVNI 342 +L + +V+ GW+ ++ LAG ++ F T+PV D ++ DVN Sbjct: 298 ALADAVTRSVVIDEGWEIMSFATQLQNLAGGNVTFATIPVTSIDGTGDYGESVVTIDVNQ 357 Query: 343 VDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGY 402 V V V+NA + GLA+ ++ L++ GY Sbjct: 358 VHAFFQEALGEAEPAPEDGSDDQSADQAPDLSEVEVHVLNASYVEGLANGIAAQLQELGY 417 Query: 403 TTDQVRDRKSGDPAATTIKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNF 462 + + + G + I A A+ + LG P ++S++ + V Sbjct: 418 SIAETGNAAEGLYYESQILAAEEDSAKALAISEALG-GLPIVANSSLDDNTVIVV----- 471 Query: 463 SMPAPXXXXXXXXXYPKPNAYYNGGDDSS-SYPAPDHGQPID-------GGGVPCVN 511 Y P A N S+ P D G+PI+ G G CVN Sbjct: 472 ----------SAGDYAGPTAEANAVTSSTVGQPGADVGEPIESPEFDAGGDGPRCVN 518 >tr|Q8FRK7|Q8FRK7_COREF Tax_Id=152794 SubName: Full=Putative uncharacterized protein;[Corynebacterium efficiens] Length = 524 Score = 217 bits (552), Expect = 3e-54 Identities = 164/513 (31%), Positives = 240/513 (46%), Gaps = 38/513 (7%) Query: 21 VSRTLMTLVSVVALGMTGAGYWVAHGALTGITISQALT------AEDPRSTGNNMNILLI 74 V R+++ +SV+ L ++G GY+ A G++ + + LT D +S +ILL+ Sbjct: 28 VVRSVVAFLSVLVLLISGLGYF-AVGSIGDVANAGNLTLGGGAGVRDGQSLDGATDILLV 86 Query: 75 GLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSADGKVV-AFSIPRDDWVP 133 G DSR D +GN L L L AGD + NT+T++++ V DG A SIPRD ++ Sbjct: 87 GSDSRSDAQGNTLSDEELAMLRAGDEEND--NTDTIMVIRVPNDGSSASAVSIPRDTYIH 144 Query: 134 FTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREXXXXXXXXXXXXXXXV 193 Y ++KI YG K EL++QG T++ ELE+R +E + Sbjct: 145 DDE---YGNMKINGVYGAYKDARHTELVEQGFTNESELESRSKEAGREGLIDAVSNLTGI 201 Query: 194 PIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRLDAAQALAFVRQRH 253 +D++AE+ L GF L A+GGVEVCLN V++ SGADF AGRQ L + AL+FVRQRH Sbjct: 202 TVDHYAEIGLLGFVLLTDAVGGVEVCLNEPVNEPLSGADFDAGRQTLGGSDALSFVRQRH 261 Query: 254 GLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVARKDLVLSGGWD-EDLIR 312 GL GDLDR RQQAF++S++ + SGT TN +L +L + +++ GWD Sbjct: 262 GLPRGDLDRIVRQQAFMASLVNQILSSGTLTNPGKLSALADAVMRSVIIDEGWDVMGFAT 321 Query: 313 RMGELAGADIEFRTLPVVRYDNID--GQDVNIVD--------PXXXXXXXXXXXXXXXXX 362 ++ LAG ++ F T+PV D + G+ V VD Sbjct: 322 QLQNLAGGNVTFTTIPVTSIDGVGDYGESVVTVDLDQVHAFFEDALGGDEPEETTSDGDA 381 Query: 363 XXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSG----DPAAT 418 +V V+NA +GLA V+ L GYT +++ + G Sbjct: 382 SGEATGEATANADTMVHVLNASGEAGLAGGVAGHLEGLGYTIEEIGNAIDGLYYESQVLA 441 Query: 419 TIKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXXXXXXYP 478 P A+A A LG L P +AS++ I V +++ P P Sbjct: 442 ADPTDPQAEAIAAELGGL-----PIVANASLDADTIIVISHIDYAGPTAETVSE-----P 491 Query: 479 KPNAYYNGGDDSSSYPAPDHGQPIDGGGVPCVN 511 G D+S P G G CVN Sbjct: 492 TSTPVGQPGGDASGEPILSPEIDAGGDGPRCVN 524 >tr|C0ZWW9|C0ZWW9_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR family regulatory protein;[Rhodococcus erythropolis] Length = 510 Score = 217 bits (552), Expect = 3e-54 Identities = 162/521 (31%), Positives = 249/521 (47%), Gaps = 21/521 (4%) Query: 1 MGRTKARHRAVRKPSPIRRRVS--RTLMTLVSVVALGMTGAGYWVAHGALTGITISQALT 58 M + + RA +P+PIR + S R + ++SV+ L +TG + + + L Sbjct: 1 MSHQQPQRRARPRPAPIRTKTSPARIAVAVLSVLVLLVTGFAWRGVDSLRNSLATASGLG 60 Query: 59 AEDPRSTGNNMNILLIGLDSRKDQEGNDLPWSILKHLHAGDSDQGGYNTNTLILVHVSAD 118 + ++IL++G DSR D GN L S L L AG+ + NT+T+IL+ V D Sbjct: 61 LGGGKDGA--IDILMVGTDSRTDAHGNPLSQSELDSLRAGE--EVASNTDTIILIRVPND 116 Query: 119 GK-VVAFSIPRDDWVPFTGVPGYNHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGRE 177 G A SIPRD +V VPG KI A+G TK+ +L++ G +S + + + E Sbjct: 117 GSSATAISIPRDAYV---NVPGIGMSKINAAFGATKETERLKLVNNG-SSDSDADKKSTE 172 Query: 178 XXXXXXXXXXXXXXXVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGR 237 + +D++AEV L GF L A+GGV+VCLN VD+ SGA+F AG+ Sbjct: 173 AGRTALIGAVGNLTGITVDHYAEVGLLGFVLLTNAVGGVDVCLNAPVDEPMSGANFAAGK 232 Query: 238 QRLDAAQALAFVRQRHGLDNGDLDRTHRQQAFLSSVMRDLQDSGTFTNLDRLDSLMAVAR 297 Q LD A AL+FVRQRH L GDLDR RQQ F++S++ + + T ++ +L L + + Sbjct: 233 QTLDGADALSFVRQRHDLPRGDLDRIVRQQVFMASLVSKVLSAKTLSDPGKLSQLTSAVQ 292 Query: 298 KDLVLSGGWD-EDLIRRMGELAGADIEFRTLPVVRYDNID--GQDVNIVDP--XXXXXXX 352 + +V+ WD + +++ LAG ++F T+PV+ + + G+ + VDP Sbjct: 293 RSVVIDDDWDIIEFAKQLQNLAGGKVQFETIPVLDINGMTDYGESIVKVDPKAVKKYIAG 352 Query: 353 XXXXXXXXXXXXXXXXXXXXXXXXVVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKS 412 VDV NA ++GLAS VS AL GY QV + Sbjct: 353 LVGADSEDSEETSEAPTTVNASSITVDVANASDVAGLASGVSEALSALGYKQGQVGNNTG 412 Query: 413 GDPAATTIKYGPGAQADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFSMPAPXXXXX 472 D + +T+ A+ + LG + D+S+ G ++V + ++S P Sbjct: 413 SDVSESTVFAKSADDDAALAVAEALG-GLTVKADSSLSSGKVRVVIAEDYSGPQSADAVS 471 Query: 473 XXXXYPKPNAYYNGGDDSSSYPAPDHGQPID--GGGVPCVN 511 ++S PAP G PID G CVN Sbjct: 472 PSEG-AATTTESASTTETSPTPAPP-GPPIDAASNGPRCVN 510 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.317 0.136 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 3,561,097,160 Number of extensions: 145820399 Number of successful extensions: 377058 Number of sequences better than 10.0: 2261 Number of HSP's gapped: 376573 Number of HSP's successfully gapped: 2447 Length of query: 511 Length of database: 3,846,993,858 Length adjustment: 142 Effective length of query: 369 Effective length of database: 2,245,915,032 Effective search space: 828742646808 Effective search space used: 828742646808 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 83 (36.6 bits)