BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_5085 (491 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HJ26|B2HJ26_MYCMM Tax_Id=216594 (radA)RecName: Full=DNA rep... 896 0.0 sp|P65953|RADA_MYCTU Tax_Id=1773 (radA)RecName: Full=DNA repair ... 664 0.0 sp|P65954|RADA_MYCBO Tax_Id=1765 (radA)RecName: Full=DNA repair ... 664 0.0 tr|C6DMN7|C6DMN7_MYCTK Tax_Id=478434 RecName: Full=DNA repair pr... 664 0.0 tr|C1AI44|C1AI44_MYCBT Tax_Id=561275 (radA)RecName: Full=DNA rep... 664 0.0 tr|A5U8R0|A5U8R0_MYCTA Tax_Id=419947 (radA)RecName: Full=DNA rep... 664 0.0 tr|A1KPS1|A1KPS1_MYCBP Tax_Id=410289 (radA)RecName: Full=DNA rep... 664 0.0 tr|A5WTF4|A5WTF4_MYCTF Tax_Id=336982 RecName: Full=DNA repair pr... 664 0.0 tr|A4KM70|A4KM70_MYCTU Tax_Id=395095 RecName: Full=DNA repair pr... 664 0.0 tr|A2VPZ3|A2VPZ3_MYCTU Tax_Id=348776 RecName: Full=DNA repair pr... 664 0.0 tr|Q743W8|Q743W8_MYCPA Tax_Id=1770 (radA)RecName: Full=DNA repai... 661 0.0 tr|A0QAB0|A0QAB0_MYCA1 Tax_Id=243243 (radA)RecName: Full=DNA rep... 640 0.0 tr|A3Q6W5|A3Q6W5_MYCSJ Tax_Id=164757 RecName: Full=DNA repair pr... 586 e-165 tr|Q1B2N8|Q1B2N8_MYCSS Tax_Id=164756 RecName: Full=DNA repair pr... 584 e-164 tr|A1UMG0|A1UMG0_MYCSK Tax_Id=189918 RecName: Full=DNA repair pr... 584 e-164 tr|A1TG13|A1TG13_MYCVP Tax_Id=350058 RecName: Full=DNA repair pr... 581 e-164 tr|A4T5L4|A4T5L4_MYCGI Tax_Id=350054 RecName: Full=DNA repair pr... 572 e-161 tr|A0R563|A0R563_MYCS2 Tax_Id=246196 (radA)RecName: Full=DNA rep... 560 e-157 tr|B1MGX8|B1MGX8_MYCA9 Tax_Id=561007 RecName: Full=DNA repair pr... 535 e-150 tr|C1BAB9|C1BAB9_RHOOB Tax_Id=632772 (radA)RecName: Full=DNA rep... 479 e-133 tr|Q5Z2R7|Q5Z2R7_NOCFA Tax_Id=37329 (sms)RecName: Full=DNA repai... 464 e-128 tr|C0ZPR4|C0ZPR4_RHOE4 Tax_Id=234621 (radA)RecName: Full=DNA rep... 463 e-128 tr|C3JUM6|C3JUM6_RHOER Tax_Id=596309 (radA)RecName: Full=DNA rep... 463 e-128 tr|C2ANE9|C2ANE9_TSUPA Tax_Id=521096 RecName: Full=DNA repair pr... 462 e-128 tr|C6WGL9|C6WGL9_ACTMD Tax_Id=446462 RecName: Full=DNA repair pr... 460 e-127 tr|C7MQ45|C7MQ45_SACVD Tax_Id=471857 RecName: Full=DNA repair pr... 457 e-126 tr|A4F6W0|A4F6W0_SACEN Tax_Id=405948 (radA)RecName: Full=DNA rep... 450 e-124 tr|C0U9Z2|C0U9Z2_9ACTO Tax_Id=526225 RecName: Full=DNA repair pr... 450 e-124 tr|B4VEB1|B4VEB1_9ACTO Tax_Id=465541 RecName: Full=DNA repair pr... 449 e-124 tr|Q82EA5|Q82EA5_STRAW Tax_Id=33903 (radA)RecName: Full=DNA repa... 448 e-124 tr|B5HYI2|B5HYI2_9ACTO Tax_Id=463191 RecName: Full=DNA repair pr... 446 e-123 tr|Q9X8L5|Q9X8L5_STRCO Tax_Id=1902 RecName: Full=DNA repair prot... 446 e-123 tr|C9NK14|C9NK14_9ACTO Tax_Id=591167 SubName: Full=DNA repair pr... 446 e-123 tr|C9Z0Q3|C9Z0Q3_STRSW Tax_Id=680198 SubName: Full=Putative DNA ... 443 e-122 tr|B1VSK4|B1VSK4_STRGG Tax_Id=455632 RecName: Full=DNA repair pr... 442 e-122 tr|Q0S893|Q0S893_RHOSR Tax_Id=101510 (radA)RecName: Full=DNA rep... 441 e-121 tr|D0L455|D0L455_GORB4 Tax_Id=526226 SubName: Full=DNA repair pr... 437 e-120 tr|B5HI60|B5HI60_STRPR Tax_Id=457429 RecName: Full=DNA repair pr... 437 e-120 tr|A8LF80|A8LF80_FRASN Tax_Id=298653 RecName: Full=DNA repair pr... 434 e-119 tr|Q2J538|Q2J538_FRASC Tax_Id=106370 RecName: Full=DNA repair pr... 427 e-117 tr|A4XCP0|A4XCP0_SALTO Tax_Id=369723 RecName: Full=DNA repair pr... 426 e-117 tr|C1YIG5|C1YIG5_NOCDA Tax_Id=446468 RecName: Full=DNA repair pr... 426 e-117 tr|C4RE09|C4RE09_9ACTO Tax_Id=219305 RecName: Full=DNA repair pr... 424 e-116 tr|Q0RBN3|Q0RBN3_FRAAA Tax_Id=326424 RecName: Full=DNA repair pr... 423 e-116 tr|C7NFR2|C7NFR2_KYTSD Tax_Id=478801 RecName: Full=DNA repair pr... 422 e-116 tr|D1BB82|D1BB82_9MICO Tax_Id=446469 SubName: Full=DNA repair pr... 421 e-115 tr|C2GEE6|C2GEE6_9CORY Tax_Id=548478 RecName: Full=DNA repair pr... 419 e-115 tr|C0VXL0|C0VXL0_9CORY Tax_Id=548477 RecName: Full=DNA repair pr... 419 e-115 tr|A8M7T6|A8M7T6_SALAI Tax_Id=391037 RecName: Full=DNA repair pr... 418 e-115 tr|A3TNA1|A3TNA1_9MICO Tax_Id=313589 RecName: Full=DNA repair pr... 417 e-114 >tr|B2HJ26|B2HJ26_MYCMM Tax_Id=216594 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium marinum] Length = 491 Score = 896 bits (2315), Expect = 0.0 Identities = 458/491 (93%), Positives = 459/491 (93%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +ANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS Sbjct: 1 MANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ Sbjct: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH Sbjct: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 IDTVGSALVIVDSVQTMSTSEVDGVTGG KSNGFALILVGHVTKDG Sbjct: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGVTQVRAVTAALTAAAKSNGFALILVGHVTKDG 240 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN Sbjct: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL Sbjct: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKHARLSLAVNDMYLSTVGGMRLTDP PLPTTAVMIGEVGLAGD Sbjct: 361 EKHARLSLAVNDMYLSTVGGMRLTDPSSDLAVAIALASAYANLPLPTTAVMIGEVGLAGD 420 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP Sbjct: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 Query: 481 SAKVHRLDTSH 491 SAKVHRLDTSH Sbjct: 481 SAKVHRLDTSH 491 >sp|P65953|RADA_MYCTU Tax_Id=1773 (radA)RecName: Full=DNA repair protein radA homolog; AltName: Full=DNA repair protein sms homolog;[Mycobacterium tuberculosis] Length = 480 Score = 664 bits (1713), Expect = 0.0 Identities = 349/482 (72%), Positives = 385/482 (79%), Gaps = 19/482 (3%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +ANAR QYRC++CR+++AKWVGRC EC WGTV+EV+VLSAVGG R P S Sbjct: 1 MANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRS------VAPAS 54 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPIS+V + +R PTGIDELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWAQ Sbjct: 55 GAVPISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQ 114 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY+SGEESAGQIRLRADRIGCG +EV EIYLAA+SD+H VLD Sbjct: 115 SGRRALYVSGEESAGQIRLRADRIGCG-------TEVE------EIYLAAQSDVHTVLDQ 161 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I+TV ALVIVDSVQTMSTSE DGVTGG K+N ALILVGHVTKDG Sbjct: 162 IETVQPALVIVDSVQTMSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDG 221 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNG LRMVRGVKNRFGAADEVGCFLLHDNGI+G+ DPSN Sbjct: 222 AIAGPRSLEHLVDVVLHFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSN 281 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRPTPV GTAITVTLDGKRPL+GEVQALLATP GG+PRRAVSGI ARAAMI+AVL Sbjct: 282 LFLDQRPTPVAGTAITVTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVL 341 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKHARL++AVND+YLSTVGGMRLT+P PLPTTAVMIGEVGLAGD Sbjct: 342 EKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGD 401 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 +RRVNGM RRL+EAARQGF IALVPP + VP G+ L A TIVAAL++M+DIADHR Sbjct: 402 IRRVNGMARRLSEAARQGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIADHRGTT 461 Query: 481 SA 482 A Sbjct: 462 LA 463 >sp|P65954|RADA_MYCBO Tax_Id=1765 (radA)RecName: Full=DNA repair protein radA homolog; AltName: Full=DNA repair protein sms homolog;[Mycobacterium bovis] Length = 480 Score = 664 bits (1713), Expect = 0.0 Identities = 349/482 (72%), Positives = 385/482 (79%), Gaps = 19/482 (3%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +ANAR QYRC++CR+++AKWVGRC EC WGTV+EV+VLSAVGG R P S Sbjct: 1 MANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRS------VAPAS 54 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPIS+V + +R PTGIDELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWAQ Sbjct: 55 GAVPISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQ 114 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY+SGEESAGQIRLRADRIGCG +EV EIYLAA+SD+H VLD Sbjct: 115 SGRRALYVSGEESAGQIRLRADRIGCG-------TEVE------EIYLAAQSDVHTVLDQ 161 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I+TV ALVIVDSVQTMSTSE DGVTGG K+N ALILVGHVTKDG Sbjct: 162 IETVQPALVIVDSVQTMSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDG 221 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNG LRMVRGVKNRFGAADEVGCFLLHDNGI+G+ DPSN Sbjct: 222 AIAGPRSLEHLVDVVLHFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSN 281 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRPTPV GTAITVTLDGKRPL+GEVQALLATP GG+PRRAVSGI ARAAMI+AVL Sbjct: 282 LFLDQRPTPVAGTAITVTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVL 341 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKHARL++AVND+YLSTVGGMRLT+P PLPTTAVMIGEVGLAGD Sbjct: 342 EKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGD 401 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 +RRVNGM RRL+EAARQGF IALVPP + VP G+ L A TIVAAL++M+DIADHR Sbjct: 402 IRRVNGMARRLSEAARQGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIADHRGTT 461 Query: 481 SA 482 A Sbjct: 462 LA 463 >tr|C6DMN7|C6DMN7_MYCTK Tax_Id=478434 RecName: Full=DNA repair protein radA;[Mycobacterium tuberculosis] Length = 480 Score = 664 bits (1713), Expect = 0.0 Identities = 349/482 (72%), Positives = 385/482 (79%), Gaps = 19/482 (3%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +ANAR QYRC++CR+++AKWVGRC EC WGTV+EV+VLSAVGG R P S Sbjct: 1 MANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRS------VAPAS 54 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPIS+V + +R PTGIDELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWAQ Sbjct: 55 GAVPISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQ 114 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY+SGEESAGQIRLRADRIGCG +EV EIYLAA+SD+H VLD Sbjct: 115 SGRRALYVSGEESAGQIRLRADRIGCG-------TEVE------EIYLAAQSDVHTVLDQ 161 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I+TV ALVIVDSVQTMSTSE DGVTGG K+N ALILVGHVTKDG Sbjct: 162 IETVQPALVIVDSVQTMSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDG 221 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNG LRMVRGVKNRFGAADEVGCFLLHDNGI+G+ DPSN Sbjct: 222 AIAGPRSLEHLVDVVLHFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSN 281 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRPTPV GTAITVTLDGKRPL+GEVQALLATP GG+PRRAVSGI ARAAMI+AVL Sbjct: 282 LFLDQRPTPVAGTAITVTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVL 341 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKHARL++AVND+YLSTVGGMRLT+P PLPTTAVMIGEVGLAGD Sbjct: 342 EKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGD 401 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 +RRVNGM RRL+EAARQGF IALVPP + VP G+ L A TIVAAL++M+DIADHR Sbjct: 402 IRRVNGMARRLSEAARQGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIADHRGTT 461 Query: 481 SA 482 A Sbjct: 462 LA 463 >tr|C1AI44|C1AI44_MYCBT Tax_Id=561275 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium bovis] Length = 480 Score = 664 bits (1713), Expect = 0.0 Identities = 349/482 (72%), Positives = 385/482 (79%), Gaps = 19/482 (3%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +ANAR QYRC++CR+++AKWVGRC EC WGTV+EV+VLSAVGG R P S Sbjct: 1 MANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRS------VAPAS 54 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPIS+V + +R PTGIDELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWAQ Sbjct: 55 GAVPISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQ 114 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY+SGEESAGQIRLRADRIGCG +EV EIYLAA+SD+H VLD Sbjct: 115 SGRRALYVSGEESAGQIRLRADRIGCG-------TEVE------EIYLAAQSDVHTVLDQ 161 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I+TV ALVIVDSVQTMSTSE DGVTGG K+N ALILVGHVTKDG Sbjct: 162 IETVQPALVIVDSVQTMSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDG 221 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNG LRMVRGVKNRFGAADEVGCFLLHDNGI+G+ DPSN Sbjct: 222 AIAGPRSLEHLVDVVLHFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSN 281 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRPTPV GTAITVTLDGKRPL+GEVQALLATP GG+PRRAVSGI ARAAMI+AVL Sbjct: 282 LFLDQRPTPVAGTAITVTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVL 341 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKHARL++AVND+YLSTVGGMRLT+P PLPTTAVMIGEVGLAGD Sbjct: 342 EKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGD 401 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 +RRVNGM RRL+EAARQGF IALVPP + VP G+ L A TIVAAL++M+DIADHR Sbjct: 402 IRRVNGMARRLSEAARQGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIADHRGTT 461 Query: 481 SA 482 A Sbjct: 462 LA 463 >tr|A5U8R0|A5U8R0_MYCTA Tax_Id=419947 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium tuberculosis] Length = 480 Score = 664 bits (1713), Expect = 0.0 Identities = 349/482 (72%), Positives = 385/482 (79%), Gaps = 19/482 (3%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +ANAR QYRC++CR+++AKWVGRC EC WGTV+EV+VLSAVGG R P S Sbjct: 1 MANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRS------VAPAS 54 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPIS+V + +R PTGIDELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWAQ Sbjct: 55 GAVPISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQ 114 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY+SGEESAGQIRLRADRIGCG +EV EIYLAA+SD+H VLD Sbjct: 115 SGRRALYVSGEESAGQIRLRADRIGCG-------TEVE------EIYLAAQSDVHTVLDQ 161 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I+TV ALVIVDSVQTMSTSE DGVTGG K+N ALILVGHVTKDG Sbjct: 162 IETVQPALVIVDSVQTMSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDG 221 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNG LRMVRGVKNRFGAADEVGCFLLHDNGI+G+ DPSN Sbjct: 222 AIAGPRSLEHLVDVVLHFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSN 281 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRPTPV GTAITVTLDGKRPL+GEVQALLATP GG+PRRAVSGI ARAAMI+AVL Sbjct: 282 LFLDQRPTPVAGTAITVTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVL 341 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKHARL++AVND+YLSTVGGMRLT+P PLPTTAVMIGEVGLAGD Sbjct: 342 EKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGD 401 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 +RRVNGM RRL+EAARQGF IALVPP + VP G+ L A TIVAAL++M+DIADHR Sbjct: 402 IRRVNGMARRLSEAARQGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIADHRGTT 461 Query: 481 SA 482 A Sbjct: 462 LA 463 >tr|A1KPS1|A1KPS1_MYCBP Tax_Id=410289 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium bovis] Length = 480 Score = 664 bits (1713), Expect = 0.0 Identities = 349/482 (72%), Positives = 385/482 (79%), Gaps = 19/482 (3%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +ANAR QYRC++CR+++AKWVGRC EC WGTV+EV+VLSAVGG R P S Sbjct: 1 MANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRS------VAPAS 54 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPIS+V + +R PTGIDELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWAQ Sbjct: 55 GAVPISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQ 114 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY+SGEESAGQIRLRADRIGCG +EV EIYLAA+SD+H VLD Sbjct: 115 SGRRALYVSGEESAGQIRLRADRIGCG-------TEVE------EIYLAAQSDVHTVLDQ 161 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I+TV ALVIVDSVQTMSTSE DGVTGG K+N ALILVGHVTKDG Sbjct: 162 IETVQPALVIVDSVQTMSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDG 221 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNG LRMVRGVKNRFGAADEVGCFLLHDNGI+G+ DPSN Sbjct: 222 AIAGPRSLEHLVDVVLHFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSN 281 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRPTPV GTAITVTLDGKRPL+GEVQALLATP GG+PRRAVSGI ARAAMI+AVL Sbjct: 282 LFLDQRPTPVAGTAITVTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVL 341 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKHARL++AVND+YLSTVGGMRLT+P PLPTTAVMIGEVGLAGD Sbjct: 342 EKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGD 401 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 +RRVNGM RRL+EAARQGF IALVPP + VP G+ L A TIVAAL++M+DIADHR Sbjct: 402 IRRVNGMARRLSEAARQGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIADHRGTT 461 Query: 481 SA 482 A Sbjct: 462 LA 463 >tr|A5WTF4|A5WTF4_MYCTF Tax_Id=336982 RecName: Full=DNA repair protein radA;[Mycobacterium tuberculosis] Length = 480 Score = 664 bits (1713), Expect = 0.0 Identities = 349/482 (72%), Positives = 385/482 (79%), Gaps = 19/482 (3%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +ANAR QYRC++CR+++AKWVGRC EC WGTV+EV+VLSAVGG R P S Sbjct: 1 MANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRS------VAPAS 54 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPIS+V + +R PTGIDELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWAQ Sbjct: 55 GAVPISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQ 114 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY+SGEESAGQIRLRADRIGCG +EV EIYLAA+SD+H VLD Sbjct: 115 SGRRALYVSGEESAGQIRLRADRIGCG-------TEVE------EIYLAAQSDVHTVLDQ 161 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I+TV ALVIVDSVQTMSTSE DGVTGG K+N ALILVGHVTKDG Sbjct: 162 IETVQPALVIVDSVQTMSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDG 221 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNG LRMVRGVKNRFGAADEVGCFLLHDNGI+G+ DPSN Sbjct: 222 AIAGPRSLEHLVDVVLHFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSN 281 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRPTPV GTAITVTLDGKRPL+GEVQALLATP GG+PRRAVSGI ARAAMI+AVL Sbjct: 282 LFLDQRPTPVAGTAITVTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVL 341 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKHARL++AVND+YLSTVGGMRLT+P PLPTTAVMIGEVGLAGD Sbjct: 342 EKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGD 401 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 +RRVNGM RRL+EAARQGF IALVPP + VP G+ L A TIVAAL++M+DIADHR Sbjct: 402 IRRVNGMARRLSEAARQGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIADHRGTT 461 Query: 481 SA 482 A Sbjct: 462 LA 463 >tr|A4KM70|A4KM70_MYCTU Tax_Id=395095 RecName: Full=DNA repair protein radA;[Mycobacterium tuberculosis str. Haarlem] Length = 480 Score = 664 bits (1713), Expect = 0.0 Identities = 349/482 (72%), Positives = 385/482 (79%), Gaps = 19/482 (3%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +ANAR QYRC++CR+++AKWVGRC EC WGTV+EV+VLSAVGG R P S Sbjct: 1 MANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRS------VAPAS 54 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPIS+V + +R PTGIDELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWAQ Sbjct: 55 GAVPISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQ 114 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY+SGEESAGQIRLRADRIGCG +EV EIYLAA+SD+H VLD Sbjct: 115 SGRRALYVSGEESAGQIRLRADRIGCG-------TEVE------EIYLAAQSDVHTVLDQ 161 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I+TV ALVIVDSVQTMSTSE DGVTGG K+N ALILVGHVTKDG Sbjct: 162 IETVQPALVIVDSVQTMSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDG 221 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNG LRMVRGVKNRFGAADEVGCFLLHDNGI+G+ DPSN Sbjct: 222 AIAGPRSLEHLVDVVLHFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSN 281 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRPTPV GTAITVTLDGKRPL+GEVQALLATP GG+PRRAVSGI ARAAMI+AVL Sbjct: 282 LFLDQRPTPVAGTAITVTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVL 341 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKHARL++AVND+YLSTVGGMRLT+P PLPTTAVMIGEVGLAGD Sbjct: 342 EKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGD 401 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 +RRVNGM RRL+EAARQGF IALVPP + VP G+ L A TIVAAL++M+DIADHR Sbjct: 402 IRRVNGMARRLSEAARQGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIADHRGTT 461 Query: 481 SA 482 A Sbjct: 462 LA 463 >tr|A2VPZ3|A2VPZ3_MYCTU Tax_Id=348776 RecName: Full=DNA repair protein radA;[Mycobacterium tuberculosis C] Length = 480 Score = 664 bits (1713), Expect = 0.0 Identities = 349/482 (72%), Positives = 385/482 (79%), Gaps = 19/482 (3%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +ANAR QYRC++CR+++AKWVGRC EC WGTV+EV+VLSAVGG R P S Sbjct: 1 MANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRS------VAPAS 54 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPIS+V + +R PTGIDELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWAQ Sbjct: 55 GAVPISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQ 114 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY+SGEESAGQIRLRADRIGCG +EV EIYLAA+SD+H VLD Sbjct: 115 SGRRALYVSGEESAGQIRLRADRIGCG-------TEVE------EIYLAAQSDVHTVLDQ 161 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I+TV ALVIVDSVQTMSTSE DGVTGG K+N ALILVGHVTKDG Sbjct: 162 IETVQPALVIVDSVQTMSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDG 221 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNG LRMVRGVKNRFGAADEVGCFLLHDNGI+G+ DPSN Sbjct: 222 AIAGPRSLEHLVDVVLHFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSN 281 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRPTPV GTAITVTLDGKRPL+GEVQALLATP GG+PRRAVSGI ARAAMI+AVL Sbjct: 282 LFLDQRPTPVAGTAITVTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVL 341 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKHARL++AVND+YLSTVGGMRLT+P PLPTTAVMIGEVGLAGD Sbjct: 342 EKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGD 401 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 +RRVNGM RRL+EAARQGF IALVPP + VP G+ L A TIVAAL++M+DIADHR Sbjct: 402 IRRVNGMARRLSEAARQGFTIALVPPSDDPVPPGMHALRASTIVAALQYMVDIADHRGTT 461 Query: 481 SA 482 A Sbjct: 462 LA 463 >tr|Q743W8|Q743W8_MYCPA Tax_Id=1770 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium paratuberculosis] Length = 474 Score = 661 bits (1706), Expect = 0.0 Identities = 348/481 (72%), Positives = 385/481 (80%), Gaps = 26/481 (5%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +A AR QYRC++CR++TAKWVGRC EC +WGTV+EV LSAV G RR A S Sbjct: 1 MATARSQYRCSECRHVTAKWVGRCLECGTWGTVDEVPALSAVAG-----RRPRLTAA--S 53 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 QAVPI+S++P+ SRHR TG+DELDRVLGGGVVPGSVTLLAG+PGVGKSTLLLEVAHRWAQ Sbjct: 54 QAVPITSIKPDASRHRSTGVDELDRVLGGGVVPGSVTLLAGDPGVGKSTLLLEVAHRWAQ 113 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LYISGEESAGQIRLRADRIGCGG ++YLAAESDLH VL+H Sbjct: 114 SGRRALYISGEESAGQIRLRADRIGCGGD---------------QVYLAAESDLHTVLEH 158 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I TV ALVIVDSVQTMST+E DGV GG K+NG ALILVGHVTKDG Sbjct: 159 IATVKPALVIVDSVQTMSTTEADGVAGGVTQVRAVTAALTAAAKANGVALILVGHVTKDG 218 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDRNG LRMVRG+KNRFGAADEVGCFLLHDNGI GV DPSN Sbjct: 219 AIAGPRSLEHLVDVVLHFEGDRNGSLRMVRGIKNRFGAADEVGCFLLHDNGIAGVTDPSN 278 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQR PVPGTAITVTLDGKRPLIGEVQALLA+P+GG+PRRAVSGIDH+RAAMI+AVL Sbjct: 279 LFLDQRSAPVPGTAITVTLDGKRPLIGEVQALLASPSGGSPRRAVSGIDHSRAAMITAVL 338 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EKH +L +AVND+YLSTVGGMRLTDP PLPTTAVMIGEVGLAGD Sbjct: 339 EKHGKLPVAVNDIYLSTVGGMRLTDPSSDLAVAIALASALSELPLPTTAVMIGEVGLAGD 398 Query: 421 LRRVNGMDRRLAEAARQGFNIALVP----PGCEAVPAGLRTLCAPTIVAALEHMIDIADH 476 LRRV+GM RRL+EAARQGF+IAL+P P E VP+G+R L APTI AAL+HM+DIA+ Sbjct: 399 LRRVSGMARRLSEAARQGFSIALIPDGDDPRREIVPSGMRALRAPTIGAALKHMVDIAEP 458 Query: 477 R 477 R Sbjct: 459 R 459 >tr|A0QAB0|A0QAB0_MYCA1 Tax_Id=243243 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium avium] Length = 459 Score = 640 bits (1650), Expect = 0.0 Identities = 338/466 (72%), Positives = 372/466 (79%), Gaps = 26/466 (5%) Query: 16 LTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVPISSVQPNLSRH 75 +TAKWVGRC EC +WGTV+EV LSAV G RR A SQAVPI+S++P+ SRH Sbjct: 1 MTAKWVGRCLECGTWGTVDEVPALSAVAG-----RRPRLTAA--SQAVPITSIKPDASRH 53 Query: 76 RPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQRVLYISGEESAG 135 R TG+DELDRVLGGGVVPGSVTLLAG+PGVGKSTLLLEVAHRWAQSG+R LYISGEESAG Sbjct: 54 RSTGVDELDRVLGGGVVPGSVTLLAGDPGVGKSTLLLEVAHRWAQSGRRALYISGEESAG 113 Query: 136 QIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTVGSALVIVDSVQ 195 QIRLRADRIGCGG ++YLAAESDLH VL+H+ TV ALVIVDSVQ Sbjct: 114 QIRLRADRIGCGGD---------------QVYLAAESDLHTVLEHVATVKPALVIVDSVQ 158 Query: 196 TMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIAGPRSLEHLVDVV 255 TMST+E DGV GG K+NG ALILVGHVTKDGAIAGPRSLEHLVDVV Sbjct: 159 TMSTTEADGVAGGVTQVRAVTAALTAAAKANGVALILVGHVTKDGAIAGPRSLEHLVDVV 218 Query: 256 LHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFLDQRPTPVPGTAI 315 LHFEGDRNG LRMVRG+KNRFGAADEVGCFLLHDNGI GV DPSNLFLDQR PVPGTAI Sbjct: 219 LHFEGDRNGSLRMVRGIKNRFGAADEVGCFLLHDNGIAGVTDPSNLFLDQRSAPVPGTAI 278 Query: 316 TVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKHARLSLAVNDMYL 375 TVTLDGKRPLIGEVQALLA+P+GG+PRRAVSGIDH+RAAMI+AVLEKH +L +AVND+YL Sbjct: 279 TVTLDGKRPLIGEVQALLASPSGGSPRRAVSGIDHSRAAMITAVLEKHGKLPVAVNDIYL 338 Query: 376 STVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRRVNGMDRRLAEAA 435 STVGGMRLTDP PLPTTAVMIGEVGLAGDLRRV+GM RRL+EAA Sbjct: 339 STVGGMRLTDPSSDLAVAIALASALSELPLPTTAVMIGEVGLAGDLRRVSGMARRLSEAA 398 Query: 436 RQGFNIALVP----PGCEAVPAGLRTLCAPTIVAALEHMIDIADHR 477 RQGF+IAL+P P E VP+G+R L APTI AAL+HM+DIA+ R Sbjct: 399 RQGFSIALIPDGDDPRREIVPSGMRALRAPTIGAALQHMVDIAEPR 444 >tr|A3Q6W5|A3Q6W5_MYCSJ Tax_Id=164757 RecName: Full=DNA repair protein radA;[Mycobacterium sp.] Length = 466 Score = 586 bits (1510), Expect = e-165 Identities = 314/483 (65%), Positives = 350/483 (72%), Gaps = 27/483 (5%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +A AR QYRC++CR++TAKWVGRCP+C +WGTVEEV+VL+AV G A P S Sbjct: 1 MAKARSQYRCSECRHITAKWVGRCPDCGTWGTVEEVAVLAAVAGAP-----ARHAVAPAS 55 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPISS+ P +RH TGI ELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWA Sbjct: 56 PAVPISSIDPGRTRHDETGISELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWAV 115 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY++GEESAGQ+RLRA+R GC E+YLAAESDL L H Sbjct: 116 SGRRALYLTGEESAGQVRLRAERTGC---------------THDELYLAAESDLPTALGH 160 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKS-------NGFALILV 233 ID V +LV+VDSVQTMSTSE DGVTGG K G A++LV Sbjct: 161 IDAVQPSLVVVDSVQTMSTSENDGVTGGVTQVRAVTTALTQYAKGAAGPGGPGGIAMVLV 220 Query: 234 GHVTKDGAIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIE 293 GHVTKDGAIAGPRSLEHLVDVVLHFEGDRN LRMVRGVKNRFGAADEVGCF LHDNGIE Sbjct: 221 GHVTKDGAIAGPRSLEHLVDVVLHFEGDRNSTLRMVRGVKNRFGAADEVGCFQLHDNGIE 280 Query: 294 GVADPSNLFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARA 353 VADPS LF DQR TPV GTA+TVTLDGKRPLIGEVQAL+ P G PRRAVSGID ARA Sbjct: 281 CVADPSGLFRDQRDTPVAGTAVTVTLDGKRPLIGEVQALVGPPTGPHPRRAVSGIDAARA 340 Query: 354 AMISAVLEKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIG 413 AMI+AVL+KHARL + D+YLSTVGGMRLTDP +P +V+IG Sbjct: 341 AMIAAVLDKHARLQVGPCDIYLSTVGGMRLTDPSSDLAVAIAMASARKERAMPANSVVIG 400 Query: 414 EVGLAGDLRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDI 473 E+GLAGDLRRV GMDRRLAEAAR GF A+VPPG VP GLR L A I AAL + I Sbjct: 401 ELGLAGDLRRVTGMDRRLAEAARLGFTTAVVPPGTTGVPPGLRVLPAENISAALRVLDRI 460 Query: 474 ADH 476 AD+ Sbjct: 461 ADN 463 >tr|Q1B2N8|Q1B2N8_MYCSS Tax_Id=164756 RecName: Full=DNA repair protein radA;[Mycobacterium sp.] Length = 466 Score = 584 bits (1505), Expect = e-164 Identities = 313/483 (64%), Positives = 349/483 (72%), Gaps = 27/483 (5%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +A AR QYRC++CR++TAKWVGRCP+C +WGTVEEV+VL+AV G A P S Sbjct: 1 MAKARSQYRCSECRHITAKWVGRCPDCGTWGTVEEVAVLAAVAGAP-----ARHAVAPAS 55 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPISS+ P +RH TGI ELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWA Sbjct: 56 PAVPISSIDPGRTRHDETGISELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWAV 115 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY++GEESAGQ+RLRA+R GC E+YLAAESDL L H Sbjct: 116 SGRRALYLTGEESAGQVRLRAERTGC---------------THDELYLAAESDLPTALGH 160 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKS-------NGFALILV 233 ID V +LV+VDSVQTMSTSE DGVTGG K G A++LV Sbjct: 161 IDAVQPSLVVVDSVQTMSTSENDGVTGGVTQVRAVTTALTQYAKGAAGPGGPGGIAMVLV 220 Query: 234 GHVTKDGAIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIE 293 GHVTKDGAIAGPRSLEHLVDVVLHFEGDRN LRMVRGVKNRFGAADEVGCF LHDNGIE Sbjct: 221 GHVTKDGAIAGPRSLEHLVDVVLHFEGDRNSTLRMVRGVKNRFGAADEVGCFQLHDNGIE 280 Query: 294 GVADPSNLFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARA 353 VADPS LF DQR TPV GTA+TV LDGKRPLIGEVQAL+ P G PRRAVSGID ARA Sbjct: 281 CVADPSGLFRDQRDTPVAGTAVTVALDGKRPLIGEVQALVGPPTGPHPRRAVSGIDAARA 340 Query: 354 AMISAVLEKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIG 413 AMI+AVL+KHARL + D+YLSTVGGMRLTDP +P +V+IG Sbjct: 341 AMIAAVLDKHARLQVGPCDIYLSTVGGMRLTDPSSDLAVAIAMASARKERAMPANSVVIG 400 Query: 414 EVGLAGDLRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDI 473 E+GLAGDLRRV GMDRRLAEAAR GF A+VPPG VP GLR L A I AAL + I Sbjct: 401 ELGLAGDLRRVTGMDRRLAEAARLGFTTAVVPPGTTGVPPGLRVLPAENISAALRVLDRI 460 Query: 474 ADH 476 AD+ Sbjct: 461 ADN 463 >tr|A1UMG0|A1UMG0_MYCSK Tax_Id=189918 RecName: Full=DNA repair protein radA;[Mycobacterium sp.] Length = 466 Score = 584 bits (1505), Expect = e-164 Identities = 313/483 (64%), Positives = 349/483 (72%), Gaps = 27/483 (5%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +A AR QYRC++CR++TAKWVGRCP+C +WGTVEEV+VL+AV G A P S Sbjct: 1 MAKARSQYRCSECRHITAKWVGRCPDCGTWGTVEEVAVLAAVAGAP-----ARHAVAPAS 55 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPISS+ P +RH TGI ELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWA Sbjct: 56 PAVPISSIDPGRTRHDETGISELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWAV 115 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG+R LY++GEESAGQ+RLRA+R GC E+YLAAESDL L H Sbjct: 116 SGRRALYLTGEESAGQVRLRAERTGC---------------THDELYLAAESDLPTALGH 160 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKS-------NGFALILV 233 ID V +LV+VDSVQTMSTSE DGVTGG K G A++LV Sbjct: 161 IDAVQPSLVVVDSVQTMSTSENDGVTGGVTQVRAVTTALTQYAKGAAGPGGPGGIAMVLV 220 Query: 234 GHVTKDGAIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIE 293 GHVTKDGAIAGPRSLEHLVDVVLHFEGDRN LRMVRGVKNRFGAADEVGCF LHDNGIE Sbjct: 221 GHVTKDGAIAGPRSLEHLVDVVLHFEGDRNSTLRMVRGVKNRFGAADEVGCFQLHDNGIE 280 Query: 294 GVADPSNLFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARA 353 VADPS LF DQR TPV GTA+TV LDGKRPLIGEVQAL+ P G PRRAVSGID ARA Sbjct: 281 CVADPSGLFRDQRDTPVAGTAVTVALDGKRPLIGEVQALVGPPTGPHPRRAVSGIDAARA 340 Query: 354 AMISAVLEKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIG 413 AMI+AVL+KHARL + D+YLSTVGGMRLTDP +P +V+IG Sbjct: 341 AMIAAVLDKHARLQVGPCDIYLSTVGGMRLTDPSSDLAVAIAMASARKERAMPANSVVIG 400 Query: 414 EVGLAGDLRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDI 473 E+GLAGDLRRV GMDRRLAEAAR GF A+VPPG VP GLR L A I AAL + I Sbjct: 401 ELGLAGDLRRVTGMDRRLAEAARLGFTTAVVPPGTTGVPPGLRVLPAENISAALRVLDRI 460 Query: 474 ADH 476 AD+ Sbjct: 461 ADN 463 >tr|A1TG13|A1TG13_MYCVP Tax_Id=350058 RecName: Full=DNA repair protein radA;[Mycobacterium vanbaalenii] Length = 462 Score = 581 bits (1497), Expect = e-164 Identities = 305/467 (65%), Positives = 350/467 (74%), Gaps = 21/467 (4%) Query: 2 ANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQ 61 + R Q+RC++C ++T KWVGRCP+C +WGTV EV+ L+AVGG + RRA PA P Sbjct: 6 SKTRSQFRCSECHHVTPKWVGRCPDCGTWGTVNEVA-LTAVGGSAT--RRAVAPASP--- 59 Query: 62 AVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQS 121 AVPISS+ P +RH TGI ELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWA + Sbjct: 60 AVPISSIDPGSTRHFHTGISELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWAST 119 Query: 122 GQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHI 181 G+R LY+SGEESAGQIRLRA+R GC + E+YLAAESDL L HI Sbjct: 120 GRRALYLSGEESAGQIRLRAERTGC---------------SHDEVYLAAESDLQTALGHI 164 Query: 182 DTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGA 241 D V LV+VDSVQTMST+E DGVTGG K+ G A++LVGHVTKDGA Sbjct: 165 DAVQPTLVVVDSVQTMSTTEADGVTGGVTQVRAVTTALTMTAKTTGVAMLLVGHVTKDGA 224 Query: 242 IAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNL 301 IAGPRSLEHLVDVVLHFEGDR LRMVRG+KNRFGAADEVGCFLLHDNGIE V+DPS L Sbjct: 225 IAGPRSLEHLVDVVLHFEGDRASALRMVRGIKNRFGAADEVGCFLLHDNGIECVSDPSGL 284 Query: 302 FLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLE 361 FLDQRP PV GTA+TVTLDGKRP+IGEVQAL+ +P G+PRRAVSGID +RAAMI+AVLE Sbjct: 285 FLDQRPKPVSGTAVTVTLDGKRPMIGEVQALIGSPASGSPRRAVSGIDSSRAAMITAVLE 344 Query: 362 KHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDL 421 K A+L + +ND+YLSTVGGMRLTD LPTTA+ IGEVGLAGDL Sbjct: 345 KRAKLPVGMNDIYLSTVGGMRLTDSSSDLAVALSIASAFTDLALPTTAIAIGEVGLAGDL 404 Query: 422 RRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALE 468 RRV GMDRRLAEAAR GF A+VP G + PAGL+ L A I +AL+ Sbjct: 405 RRVTGMDRRLAEAARLGFTYAVVPSGVTSAPAGLQVLPADNITSALQ 451 >tr|A4T5L4|A4T5L4_MYCGI Tax_Id=350054 RecName: Full=DNA repair protein radA;[Mycobacterium gilvum] Length = 467 Score = 572 bits (1475), Expect = e-161 Identities = 304/467 (65%), Positives = 346/467 (74%), Gaps = 22/467 (4%) Query: 2 ANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQ 61 + R QYRC++C + TAKWVGRC +C +WGTV+EV+ L+AVGG +R RA PA P Sbjct: 6 SKVRSQYRCSECHHTTAKWVGRCSDCGTWGTVDEVA-LTAVGGATR---RAVAPASP--- 58 Query: 62 AVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQS 121 AVPISS+ P +RH TGI ELDRVLGGG+VPGSVTLLAG+PGVGKSTLLLEVAHRWA + Sbjct: 59 AVPISSIDPGTTRHFHTGISELDRVLGGGLVPGSVTLLAGDPGVGKSTLLLEVAHRWAST 118 Query: 122 GQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHI 181 G+R LY+SGEESAGQIRLRA+R GC + E+YLAAESDL L HI Sbjct: 119 GRRALYLSGEESAGQIRLRAERTGC---------------SHDEVYLAAESDLQTALGHI 163 Query: 182 DTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGA 241 D V +LV+VDSVQTMST+E DGVTGG K+ G A++LVGHVTKDGA Sbjct: 164 DAVRPSLVVVDSVQTMSTTEADGVTGGVTQVRAVTTALTMTAKTTGVAMLLVGHVTKDGA 223 Query: 242 IAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNL 301 IAGPRSLEHLVDVVLHFEGDR LRMVRGVKNRFGAADEVGCFLLHDNGIE V+DPS L Sbjct: 224 IAGPRSLEHLVDVVLHFEGDRASALRMVRGVKNRFGAADEVGCFLLHDNGIECVSDPSGL 283 Query: 302 FLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLE 361 FLDQRP V GTA+TVTLDGKRP+IGEVQAL+ G+PRRAVSGID +RAAMI+AVLE Sbjct: 284 FLDQRPKAVSGTAVTVTLDGKRPMIGEVQALIGASASGSPRRAVSGIDSSRAAMITAVLE 343 Query: 362 KHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDL 421 K ARL + ND+YLSTVGGMRLTD LPTTA+ IGEVGLAGDL Sbjct: 344 KRARLPVGTNDIYLSTVGGMRLTDSSSDLAVALAIASAYTDLALPTTAIAIGEVGLAGDL 403 Query: 422 RRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALE 468 RRV GMD+RLAEAAR GF +A+VP G AGL+ L A I +AL+ Sbjct: 404 RRVTGMDKRLAEAARLGFTVAVVPSGAVGAHAGLKVLQADNIGSALQ 450 >tr|A0R563|A0R563_MYCS2 Tax_Id=246196 (radA)RecName: Full=DNA repair protein radA;[Mycobacterium smegmatis] Length = 466 Score = 560 bits (1442), Expect = e-157 Identities = 296/474 (62%), Positives = 344/474 (72%), Gaps = 23/474 (4%) Query: 5 RLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVP 64 R QYRC++C+++ KWVGRC C +WGTV+EV+VL+ G ++L A PTS AVP Sbjct: 7 RSQYRCSECQHVAPKWVGRCANCGTWGTVDEVAVLA---GNNKLNGAARRSVAPTSPAVP 63 Query: 65 ISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQR 124 I+S+ P ++RH PTG+ ELDRVLGGG+V GSVTLLAG+PGVGKSTLLLEVA+RWA SG+R Sbjct: 64 ITSIDPGVTRHYPTGVSELDRVLGGGLVAGSVTLLAGDPGVGKSTLLLEVANRWAHSGKR 123 Query: 125 VLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTV 184 LY+SGEESAGQIRLRA+R GC ++YLAAESDL L HID V Sbjct: 124 ALYLSGEESAGQIRLRAERTGC---------------THDQVYLAAESDLQIALGHIDEV 168 Query: 185 GSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSN----GFALILVGHVTKDG 240 +LV+VDSVQTMST+E DGVTGG K+ A+ILVGHVTKDG Sbjct: 169 KPSLVVVDSVQTMSTTEADGVTGGVTQVRAVTTSLTAYAKAAVGDPAVAMILVGHVTKDG 228 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGDR LRMVRGVKNRFGAADEVGCF LHDNGIE V+DPS Sbjct: 229 AIAGPRSLEHLVDVVLHFEGDRASSLRMVRGVKNRFGAADEVGCFQLHDNGIECVSDPSG 288 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFLDQRP VPGTA+TVTLDGKRP+IGEVQAL++ P G PRRAVSGID ARAAMI AVL Sbjct: 289 LFLDQRPLAVPGTAVTVTLDGKRPMIGEVQALVSPP-AGPPRRAVSGIDSARAAMIGAVL 347 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 + R+ + ND+YLSTVGGMRLTDP +P A+ IGEVGLAGD Sbjct: 348 QTRCRMPINSNDLYLSTVGGMRLTDPSADLAVALAIASAYFDIAMPMKAIAIGEVGLAGD 407 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIA 474 LRRV GMDRRL+EAAR GF A+VPPG + PAGL+ + A I AA++ M +IA Sbjct: 408 LRRVTGMDRRLSEAARLGFTTAVVPPGVTSAPAGLKVVAADNIRAAVQTMREIA 461 >tr|B1MGX8|B1MGX8_MYCA9 Tax_Id=561007 RecName: Full=DNA repair protein radA;[Mycobacterium abscessus] Length = 473 Score = 535 bits (1377), Expect = e-150 Identities = 274/469 (58%), Positives = 337/469 (71%), Gaps = 21/469 (4%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +A R QYRC++C++ TAKWVGRCP+C +WG+V E +VLS++GG LG A P S Sbjct: 1 MAKPRAQYRCSECQHTTAKWVGRCPDCGTWGSVSETAVLSSIGG---LG--AVRAVAPAS 55 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 AVPI+S+ + +RH+PTG+ ELDRVLGGG++PGSV LLAGEPGVGKSTLLL+V H+WA Sbjct: 56 AAVPITSIATDTTRHQPTGVSELDRVLGGGLIPGSVNLLAGEPGVGKSTLLLKVVHQWAA 115 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 SG R LYISGEESA Q+RLRA+R GC E+YLA+ESDLH+VL H Sbjct: 116 SGGRALYISGEESAAQVRLRAERTGCVHD---------------EVYLASESDLHSVLGH 160 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 I+ V L I+DSVQTMST++ DGVTGG KS+G A++LVGHVTKDG Sbjct: 161 IEAVKPTLAIIDSVQTMSTTDADGVTGGVTQVRAVTTALTMAAKSSGVAMVLVGHVTKDG 220 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 AIAGPRSLEHLVDVVLHFEGD++ LRMVRG+KNRFGAADEVGCF L D GIE V+DPS Sbjct: 221 AIAGPRSLEHLVDVVLHFEGDKHSALRMVRGIKNRFGAADEVGCFQLRDKGIECVSDPSG 280 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFL+ R GTA+TVTLDGKRPL+GEVQ+L+ T +PRRAVSG+DHAR+AM++AVL Sbjct: 281 LFLEHREKAAAGTAVTVTLDGKRPLLGEVQSLVTTSTNPSPRRAVSGLDHARSAMVTAVL 340 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 E+H RL L ND+Y++TVGGMR+TDP LP V IGEVGLAGD Sbjct: 341 ERHGRLPLGNNDIYMATVGGMRMTDPSADLAILMAVASAYTDIALPANMVFIGEVGLAGD 400 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPP-GCEAVPAGLRTLCAPTIVAALE 468 +RR + +R++EAAR G+ A++PP G + PAG+ L PT+ ALE Sbjct: 401 IRRTAAVGKRISEAARLGYTHAVIPPEGDDLHPAGMHLLRCPTVGRALE 449 >tr|C1BAB9|C1BAB9_RHOOB Tax_Id=632772 (radA)RecName: Full=DNA repair protein radA;[Rhodococcus opacus] Length = 460 Score = 479 bits (1233), Expect = e-133 Identities = 250/471 (53%), Positives = 321/471 (68%), Gaps = 19/471 (4%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGG--GSRLGRRAHGPAVP 58 +A + +RC+ C+ KWVGRCPEC SWG+++E ++++V G+ L + G +P Sbjct: 1 MAKLKSSFRCSSCQCTVPKWVGRCPECGSWGSMDEAPIVASVASRPGASLAKAGAGAVLP 60 Query: 59 TSQAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRW 118 ++ A PI+ + +R +PTGIDELDRVLGGGVVPGSV LLAGEPGVGKSTLLLEV H+W Sbjct: 61 STPATPITRIDSTSTRAKPTGIDELDRVLGGGVVPGSVVLLAGEPGVGKSTLLLEVVHQW 120 Query: 119 AQSG--QRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHA 176 A+ G R LY++GEESAGQ+RLRADR G + E +YLAAESDL Sbjct: 121 ARRGPDDRSLYVTGEESAGQVRLRADRTGA-------VHE--------RVYLAAESDLAT 165 Query: 177 VLDHIDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHV 236 VL H++ V L+IVDSVQTM ++VDGV GG K++G ++L+GHV Sbjct: 166 VLGHVEQVRPTLLIVDSVQTMLAADVDGVVGGVTQVKAVTSALTSLAKASGVPVLLIGHV 225 Query: 237 TKDGAIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVA 296 TKDGA+AGPRSLEHLVDVVLHFEGD++ LRMVRGVKNRFGAADEVGCF L ++GI G++ Sbjct: 226 TKDGAVAGPRSLEHLVDVVLHFEGDKHSTLRMVRGVKNRFGAADEVGCFELREDGIAGIS 285 Query: 297 DPSNLFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMI 356 DPS LFL R VPGTA+TV +DGKRPL+GEVQAL+A + APRRAVSG+D AR AM+ Sbjct: 286 DPSGLFLHHRAEAVPGTAVTVMMDGKRPLLGEVQALVAATSMPAPRRAVSGLDSARVAMV 345 Query: 357 SAVLEKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVG 416 AVL++ + +A D+Y +TVGGMR+T+P +P V++GEVG Sbjct: 346 LAVLDRRCGVQIAKQDVYAATVGGMRMTEPSADLALALAVASAVRDRAVPDGLVILGEVG 405 Query: 417 LAGDLRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAAL 467 LAG++RRV G+ RRLAEA R GF A+VP A P G++ + AA+ Sbjct: 406 LAGEVRRVPGVGRRLAEAHRLGFTRAIVPLDSGAAPKGMKVTEVGNLDAAI 456 >tr|Q5Z2R7|Q5Z2R7_NOCFA Tax_Id=37329 (sms)RecName: Full=DNA repair protein radA;[Nocardia farcinica] Length = 462 Score = 464 bits (1193), Expect = e-128 Identities = 243/450 (54%), Positives = 309/450 (68%), Gaps = 21/450 (4%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +A + +RC+ C + AKWVG+CP+C +WGTV+EV+V + G GRRA +P++ Sbjct: 1 MAKTKAIFRCSACSHEVAKWVGKCPDCGAWGTVDEVAVSAGAPGAP--GRRA---MLPST 55 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 A PIS++ +++ RPTG+ ELDRVLGGGVV GSV LL+GEPGVGKSTLLLEVAH+WA+ Sbjct: 56 AAAPISAIDSQVTKARPTGVSELDRVLGGGVVAGSVVLLSGEPGVGKSTLLLEVAHQWAR 115 Query: 121 S-GQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLD 179 G++ LY++ EESAGQ+RLRADR G + E +++LAAESDL VL Sbjct: 116 RPGEKALYVTAEESAGQVRLRADRTGA-------VHE--------QVFLAAESDLSIVLG 160 Query: 180 HIDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKD 239 H++ V L++VDSVQTM E +GV GG K++G A++LVGHVTKD Sbjct: 161 HVEQVRPTLLVVDSVQTMLAPEAEGVIGGVTQVRAVTAALTSLAKASGIAVLLVGHVTKD 220 Query: 240 GAIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPS 299 G +AGPR+LEHLVDVVL FEGD+N LRMVRG+KNRFG+ADEVGCF LH++GI V DPS Sbjct: 221 GNVAGPRTLEHLVDVVLQFEGDKNSTLRMVRGIKNRFGSADEVGCFELHEDGIACVDDPS 280 Query: 300 NLFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAV 359 LFL R PVPGTA+TV +DGKRPL+GEVQ L APRRAVSG+D+ R AM+ AV Sbjct: 281 GLFLHHRTDPVPGTAVTVAMDGKRPLVGEVQGLTVKTEIPAPRRAVSGLDYNRVAMVLAV 340 Query: 360 LEKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAG 419 L+ R+ L +D+Y +TVGGMRL +P LP V++GEVGLAG Sbjct: 341 LQSRGRVFLGKHDVYAATVGGMRLAEPAADLAIALAIASAECDTALPAGWVILGEVGLAG 400 Query: 420 DLRRVNGMDRRLAEAARQGFNIALVPPGCE 449 ++R+V G+ RRLAEA R GF ALVPPG E Sbjct: 401 EVRKVTGVARRLAEAERLGFTTALVPPGSE 430 >tr|C0ZPR4|C0ZPR4_RHOE4 Tax_Id=234621 (radA)RecName: Full=DNA repair protein radA;[Rhodococcus erythropolis] Length = 477 Score = 463 bits (1192), Expect = e-128 Identities = 246/473 (52%), Positives = 315/473 (66%), Gaps = 19/473 (4%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGG--GSRLGRRAHGPAVP 58 +A + YRC++C+ + KWVGRCP+C SWG++ EV+V++ V G+ L + +P Sbjct: 1 MAKVKSNYRCSECQSVVPKWVGRCPDCDSWGSMTEVAVVAPVASRAGASLAKAGSSAVLP 60 Query: 59 TSQAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRW 118 T+ A P++ + ++ +PTGI ELDRVLGGGVVPGSV LLAGEPGVGKSTLLLEV +RW Sbjct: 61 TTPATPLTQIDSTSTQAKPTGIGELDRVLGGGVVPGSVVLLAGEPGVGKSTLLLEVVYRW 120 Query: 119 AQ--SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHA 176 A + R LY++GEESAGQ+RLRADR + E +YLAAESDL Sbjct: 121 AMRSADDRALYVTGEESAGQVRLRADRTN-------SVHE--------RMYLAAESDLAT 165 Query: 177 VLDHIDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHV 236 +L HI+ V LVIVDSVQTM ++VDGV GG K++G ++L+GHV Sbjct: 166 ILGHIEQVKPTLVIVDSVQTMLAADVDGVVGGVTQVKAVTSALTSLAKASGIPVLLIGHV 225 Query: 237 TKDGAIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVA 296 TKDGA+AGPRSLEHLVDVVLHFEGD++ LRMVRGVKNRFGAADEVGCF L + GI ++ Sbjct: 226 TKDGAVAGPRSLEHLVDVVLHFEGDKHSTLRMVRGVKNRFGAADEVGCFELSEQGINEIS 285 Query: 297 DPSNLFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMI 356 DPS LFL R V GTA+TV +DGKRPL+GEVQAL+A PRRAVSG+D AR AM+ Sbjct: 286 DPSGLFLHHREEAVEGTAVTVMMDGKRPLLGEVQALVAATPLPTPRRAVSGLDTARVAMV 345 Query: 357 SAVLEKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVG 416 AVLE+ +S++ D+Y +TVGGMR+T+P P+P V++GEVG Sbjct: 346 LAVLERRVGVSISKADVYAATVGGMRMTEPGADLALAIAVASAVKAKPVPKGLVILGEVG 405 Query: 417 LAGDLRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEH 469 LAG++RRV G++RRL EAAR GF A+VP G+R + AL + Sbjct: 406 LAGEVRRVAGVNRRLIEAARLGFTSAIVPVDSGPNIPGMRVNEVANLAEALAY 458 >tr|C3JUM6|C3JUM6_RHOER Tax_Id=596309 (radA)RecName: Full=DNA repair protein radA;[Rhodococcus erythropolis SK121] Length = 477 Score = 463 bits (1192), Expect = e-128 Identities = 246/473 (52%), Positives = 315/473 (66%), Gaps = 19/473 (4%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGG--GSRLGRRAHGPAVP 58 +A + YRC++C+ + KWVGRCP+C SWG++ EV+V++ V G+ L + +P Sbjct: 1 MAKVKSNYRCSECQSVVPKWVGRCPDCDSWGSMTEVAVVAPVASRAGASLAKAGSSAVLP 60 Query: 59 TSQAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRW 118 T+ A P++ + ++ +PTGI ELDRVLGGGVVPGSV LLAGEPGVGKSTLLLEV +RW Sbjct: 61 TTPATPLTQIDSTSTQAKPTGIGELDRVLGGGVVPGSVVLLAGEPGVGKSTLLLEVVYRW 120 Query: 119 AQ--SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHA 176 A + R LY++GEESAGQ+RLRADR + E +YLAAESDL Sbjct: 121 AMRSADDRALYVTGEESAGQVRLRADRTN-------SVHE--------RMYLAAESDLAT 165 Query: 177 VLDHIDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHV 236 +L HI+ V LVIVDSVQTM ++VDGV GG K++G ++L+GHV Sbjct: 166 ILGHIEQVKPTLVIVDSVQTMLAADVDGVVGGVTQVKAVTSALTSLAKASGIPVLLIGHV 225 Query: 237 TKDGAIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVA 296 TKDGA+AGPRSLEHLVDVVLHFEGD++ LRMVRGVKNRFGAADEVGCF L + GI ++ Sbjct: 226 TKDGAVAGPRSLEHLVDVVLHFEGDKHSTLRMVRGVKNRFGAADEVGCFELSEQGINEIS 285 Query: 297 DPSNLFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMI 356 DPS LFL R V GTA+TV +DGKRPL+GEVQAL+A PRRAVSG+D AR AM+ Sbjct: 286 DPSGLFLHHREEAVEGTAVTVMMDGKRPLLGEVQALVAATPLPTPRRAVSGLDTARVAMV 345 Query: 357 SAVLEKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVG 416 AVLE+ +S++ D+Y +TVGGMR+T+P P+P V++GEVG Sbjct: 346 LAVLERRVGVSISKADVYAATVGGMRMTEPGADLALAIAVASAVKAKPVPKGLVILGEVG 405 Query: 417 LAGDLRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEH 469 LAG++RRV G++RRL EAAR GF A+VP G+R + AL + Sbjct: 406 LAGEVRRVAGVNRRLIEAARLGFTSAIVPVDSGPNIPGMRVNEVANLAEALAY 458 >tr|C2ANE9|C2ANE9_TSUPA Tax_Id=521096 RecName: Full=DNA repair protein radA;[Tsukamurella paurometabola DSM 20162] Length = 456 Score = 462 bits (1189), Expect = e-128 Identities = 252/466 (54%), Positives = 315/466 (67%), Gaps = 22/466 (4%) Query: 6 LQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAH-GPAVPTSQAVP 64 +QY C++C + AKWVGRCP C +W T+EE + VGGGS G AH G +P++ AVP Sbjct: 1 MQYTCSECGHTVAKWVGRCPSCGAWSTMEE-GAPARVGGGS--GPTAHVGLTLPSTPAVP 57 Query: 65 ISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQ- 123 I+ + PN +R P GI ELDRVLGGG+VPGSV LLAGEPGVGKSTLLL+V HRWA +G+ Sbjct: 58 ITRIDPNSTRALPVGIGELDRVLGGGIVPGSVILLAGEPGVGKSTLLLDVVHRWASTGRG 117 Query: 124 RVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDT 183 + LY++GEESAGQ+RLRA+R G S E+YLAAESDL VL H++ Sbjct: 118 KSLYVTGEESAGQVRLRAERTGA---------------LSDELYLAAESDLGTVLGHVEQ 162 Query: 184 VGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIA 243 + L++VDSVQT+S S VDGV GG K++G A+ILVGHVTKDGA+A Sbjct: 163 ISPTLMVVDSVQTLSASGVDGVHGGVTQVRAITATLTSLAKASGIAVILVGHVTKDGAVA 222 Query: 244 GPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFL 303 GPRSLEHLVDVVL FEGD++ LRMVRG+KNRFGA+DEVGCF ++GI V DPS LFL Sbjct: 223 GPRSLEHLVDVVLSFEGDKHSTLRMVRGIKNRFGASDEVGCFEQRESGIAQVTDPSGLFL 282 Query: 304 DQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKH 363 R GTA+TV LDGKRP++GE+QAL+ PRRAVSG+D AR AMI AVL KH Sbjct: 283 HHRDQAAAGTAVTVGLDGKRPMLGELQALVTPTPLPQPRRAVSGLDSARVAMILAVLTKH 342 Query: 364 ARL-SLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLR 422 + +LA D+Y +TVGGM++T+P L V++GEVGLAG++R Sbjct: 343 GGIENLAQKDVYAATVGGMKITEPAADLALALAIASGAADTALRPNTVVLGEVGLAGEVR 402 Query: 423 RVNGMDRRLAEAARQGFNIALVPPGCEAVPAG-LRTLCAPTIVAAL 467 RV G++RRLAEA R GF A+VPP E + G +R A T+ A+ Sbjct: 403 RVTGVERRLAEAHRMGFTHAIVPPAQERLRVGDMRIAEAATVAEAV 448 >tr|C6WGL9|C6WGL9_ACTMD Tax_Id=446462 RecName: Full=DNA repair protein radA;[Actinosynnema mirum] Length = 462 Score = 460 bits (1184), Expect = e-127 Identities = 252/467 (53%), Positives = 308/467 (65%), Gaps = 24/467 (5%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 V AR YRCA+C + +KWVGRCPEC +WGTVEE V + R G + Sbjct: 5 VRAARPVYRCAECGHEVSKWVGRCPECQAWGTVEERGVAAPA-------RFLAGAT--SG 55 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 A PI V SR TG+ ELDRVLGGG+VPG+V LLAGEPGVGKSTLLLEVAH+WA Sbjct: 56 DARPIGQVDIESSRASATGVGELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLEVAHQWAS 115 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 + R LY++GEESAGQ+RLRADR G + EIYLAAESD+ AVL Sbjct: 116 TVGRCLYVTGEESAGQVRLRADRTG---------------NLHDEIYLAAESDISAVLGQ 160 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 +D V +++IVDSVQTMS+ +DG+ GG K +ILVGHVTKDG Sbjct: 161 VDAVKPSMMIVDSVQTMSSLSIDGMPGGVSQVRAVTSGLISVAKERNLPIILVGHVTKDG 220 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 ++AGPR LEHLVDVVL FEGDR+ LR++RG+KNRFGAADEVGCF L D+GI GV DPS Sbjct: 221 SVAGPRVLEHLVDVVLQFEGDRHSTLRLLRGIKNRFGAADEVGCFELRDDGIVGVPDPSG 280 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 LFL++R V G+A+TV ++GKRPL+GEVQAL+A + APRRAVSG+D AR AM+ AVL Sbjct: 281 LFLNRREQDVTGSAVTVVVEGKRPLLGEVQALVAPTSLPAPRRAVSGLDSARVAMVMAVL 340 Query: 361 EKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 EK R+ L D++ +TVGGMRL +P PLP V++GEVGL+G+ Sbjct: 341 EKRGRVPLGNKDVFAATVGGMRLVEPSVDLALALAVASAAVDQPLPHDLVVVGEVGLSGE 400 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAAL 467 LRRVNG+ RRL+EAAR G+ ALVPP +P R L A + AL Sbjct: 401 LRRVNGVGRRLSEAARLGYTRALVPPDAGPLPKETRALVANDLGEAL 447 >tr|C7MQ45|C7MQ45_SACVD Tax_Id=471857 RecName: Full=DNA repair protein radA;[Saccharomonospora viridis] Length = 454 Score = 457 bits (1175), Expect = e-126 Identities = 247/461 (53%), Positives = 302/461 (65%), Gaps = 23/461 (4%) Query: 8 YRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVPISS 67 YRCA+C Y AKW+GRCPEC +WGT+EE G +R P+S A PI+ Sbjct: 8 YRCAECGYEVAKWLGRCPECQAWGTIEE-------RGDARAPIARVAAGAPSSPARPIAE 60 Query: 68 VQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWA-QSGQRVL 126 V SR R TG+ ELDRVLGGG+VPG V LLAGEPGVGKSTLLLEVA++WA SG L Sbjct: 61 VDLEASRARATGVSELDRVLGGGLVPGVVVLLAGEPGVGKSTLLLEVAYQWAANSGASAL 120 Query: 127 YISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTVGS 186 Y++GEESAGQ+RLRA+R G + ++LAAESDL AVL H+D V Sbjct: 121 YVTGEESAGQVRLRAERTG---------------NVHDRMFLAAESDLAAVLGHVDDVKP 165 Query: 187 ALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIAGPR 246 L+IVDSVQTMS+ + +G GG K G +LVGHVTK+G++AGPR Sbjct: 166 GLLIVDSVQTMSSPQAEGAPGGVTQVKAVTAGLVALAKERGLPTVLVGHVTKEGSVAGPR 225 Query: 247 SLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFLDQR 306 LEHLVDVVLHFEGD++ LRMVRGVKNRFGAADE+GCF L D+GI GV DPS LFL++ Sbjct: 226 VLEHLVDVVLHFEGDKHSTLRMVRGVKNRFGAADEIGCFELRDDGIVGVPDPSGLFLNRH 285 Query: 307 PTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKHARL 366 VPGTA+TVT++GKRPL+GEVQAL+ + PRRAVSG+D AR +M+ AVLEK Sbjct: 286 AEAVPGTAVTVTVEGKRPLLGEVQALVTDSSLAQPRRAVSGLDSARVSMVLAVLEKRTGS 345 Query: 367 SLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRRVNG 426 L D+Y +TVGGM++T+P L V IGEVGLAG++RRV G Sbjct: 346 PLGGKDVYTATVGGMKVTEPAVDLAVALAVWSGMRDRALSPRLVAIGEVGLAGEVRRVTG 405 Query: 427 MDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAAL 467 + RRL EAAR GF ALVPP +PA ++TL + +AL Sbjct: 406 VGRRLTEAARLGFTHALVPPDSGPLPADIKTLEVADLASAL 446 >tr|A4F6W0|A4F6W0_SACEN Tax_Id=405948 (radA)RecName: Full=DNA repair protein radA;[Saccharopolyspora erythraea] Length = 460 Score = 450 bits (1158), Expect = e-124 Identities = 242/466 (51%), Positives = 307/466 (65%), Gaps = 24/466 (5%) Query: 4 ARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAV 63 AR +RCADC + AKWVGRCP C +WGT++E A L + A G P + A Sbjct: 9 ARPGFRCADCGHEVAKWVGRCPSCQAWGTIDE-----AAAARPALAKVAAG--APATPAR 61 Query: 64 PISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQ 123 PI+ V + +R TGI ELDRVLGGG+VPG+V L+AGEPGVGKSTLLLEVAHRWA +G Sbjct: 62 PIAEVDLDSARAVSTGIGELDRVLGGGIVPGAVVLMAGEPGVGKSTLLLEVAHRWAATGG 121 Query: 124 R--VLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHI 181 LY++GEESAGQ+RLRA+R P ++YL AESDL +VL H+ Sbjct: 122 GGPSLYVTGEESAGQVRLRAERTDSVHP---------------QLYLGAESDLGSVLGHV 166 Query: 182 DTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGA 241 D+V L+IVDSVQT+ + E +G GG K G ++LVGHVTKDGA Sbjct: 167 DSVKPGLLIVDSVQTVQSPEAEGSPGGVTQVRAVTSALVALAKERGLPVLLVGHVTKDGA 226 Query: 242 IAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNL 301 +AGPR LEHLVDVVLHFEGDR+ LRM+RGVKNRFG +DEVGCF D+GI VADPS L Sbjct: 227 VAGPRVLEHLVDVVLHFEGDRHSSLRMLRGVKNRFGPSDEVGCFEQRDDGIAEVADPSGL 286 Query: 302 FLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLE 361 F++++ T V GTA+TV ++GKRPL+ EVQAL+ PRRAVSG+D AR +M+ AVL+ Sbjct: 287 FVNRQETQVEGTAVTVMVEGKRPLLAEVQALVTPTQMTMPRRAVSGLDSARVSMMLAVLD 346 Query: 362 KHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDL 421 KH + +++ +TVGGM++++P PLP+ + +GEVGLAG++ Sbjct: 347 KHGGVKTGDQEVFAATVGGMKVSEPAADLAVALAVASSRRGVPLPSNVIAVGEVGLAGEI 406 Query: 422 RRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAAL 467 RRVN + RRLAEAAR GF+ ALVPP +P G+RT P I AAL Sbjct: 407 RRVNAVGRRLAEAARLGFDHALVPPDSGPLPRGVRTTVVPDIRAAL 452 >tr|C0U9Z2|C0U9Z2_9ACTO Tax_Id=526225 RecName: Full=DNA repair protein radA;[Geodermatophilus obscurus DSM 43160] Length = 449 Score = 450 bits (1158), Expect = e-124 Identities = 239/468 (51%), Positives = 315/468 (67%), Gaps = 23/468 (4%) Query: 4 ARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAV 63 +R +RC +C Y +AKWVGRCPEC +WGT++EV + + S L A GP T+ AV Sbjct: 3 SRPAHRCTECGYASAKWVGRCPECQAWGTIQEVGIPA-----SPLRAVAAGPV--TAPAV 55 Query: 64 PISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQ 123 PI+ V+ +R PTGIDE DRVLGGG+VPG+V L+AGEPGVGKSTLLLEVAHR A S Sbjct: 56 PIAQVELAAARAVPTGIDEFDRVLGGGLVPGAVLLVAGEPGVGKSTLLLEVAHRVAASNG 115 Query: 124 RVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDT 183 L +SGEESA Q+RLRA+RIG A D +YLAAE++L AVL H++ Sbjct: 116 PALVVSGEESAAQVRLRAERIG----ALHD-----------RLYLAAETELSAVLAHVED 160 Query: 184 VGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIA 243 V +L+++DSVQT+ + V+G GG KS ILVGHVTKDGAIA Sbjct: 161 VAPSLLVLDSVQTVRSPAVEGTDGGSTQVRAVASALTAVAKSRAMTTILVGHVTKDGAIA 220 Query: 244 GPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFL 303 GPR+LEHLVDVV+ F+G+R+ LR++R +KNRFG ADE+GCF + DNG+ GV DPS+LF+ Sbjct: 221 GPRTLEHLVDVVVSFDGERHSTLRLIRAMKNRFGPADEIGCFEIGDNGVAGVPDPSHLFV 280 Query: 304 DQRPTPVPGTAITVTLDGKRPLIGEVQALL-ATPNGGAPRRAVSGIDHARAAMISAVLEK 362 +R PVPG+ +TVTL+G RPL+ EVQAL+ A+ GG+PRRAVSG+D R AM++AV+E+ Sbjct: 281 SRRTAPVPGSCVTVTLEGSRPLLAEVQALVAASGGGGSPRRAVSGLDSQRVAMVNAVVER 340 Query: 363 HARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLR 422 R+ LA D++ ++VGG+R+ +P PLP V +GEVGL+G++R Sbjct: 341 RGRVRLADADVFAASVGGVRIAEPAADLALALAIASAAKDVPLPRGLVAVGEVGLSGEIR 400 Query: 423 RVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHM 470 RV G RRLAEAARQG+ +ALVP + P G+R + P + AA + Sbjct: 401 RVGGTGRRLAEAARQGYKVALVPEDAGSAPKGMRLVEVPDLGAAFARL 448 >tr|B4VEB1|B4VEB1_9ACTO Tax_Id=465541 RecName: Full=DNA repair protein radA;[Streptomyces sp. Mg1] Length = 471 Score = 449 bits (1155), Expect = e-124 Identities = 243/456 (53%), Positives = 300/456 (65%), Gaps = 24/456 (5%) Query: 2 ANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQ 61 A R YRC +C Y TAKW+GRCPEC +WGTVEE+ GG + A G ++ Sbjct: 10 AKDRPSYRCTECGYTTAKWLGRCPECQAWGTVEEM------GGAPAVRTTAAGRV--SAP 61 Query: 62 AVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQS 121 A+PI+ V + R TG+DELDRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA + A Sbjct: 62 ALPIAQVDGRTATARSTGVDELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAASD 121 Query: 122 GQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHI 181 R LY++GEESA Q+RLRADRI S +YLAAE+DL AVL H+ Sbjct: 122 AHRTLYVTGEESASQVRLRADRINA---------------LSDHLYLAAETDLSAVLGHL 166 Query: 182 DTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGA 241 D V +L+++DSVQT+++ E+DG GG K G A +LVGHVTKDGA Sbjct: 167 DAVKPSLLVLDSVQTVASPEIDGAPGGMAQVREVAGALIRASKERGMATLLVGHVTKDGA 226 Query: 242 IAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNL 301 IAGPR LEHLVDVVL FEGDR+ LR+VRGVKNR+GA DEVGCF LHD GI G+ADPS L Sbjct: 227 IAGPRLLEHLVDVVLSFEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGL 286 Query: 302 FLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLE 361 FL +R VPGT +TVTL+GKRPL+ EVQAL +PRR SG++ +R +M+ AVLE Sbjct: 287 FLTRRAEAVPGTCLTVTLEGKRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLE 346 Query: 362 KHARL-SLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 + R+ +L D+Y +TVGG++LT+P PLP V IGEVGLAG+ Sbjct: 347 QRGRITALGKRDIYSATVGGVKLTEPAADLAIALALASAASDVPLPKNLVAIGEVGLAGE 406 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLR 456 +RRV G+ RRLAEA R GF ALVP VPAG++ Sbjct: 407 VRRVTGVQRRLAEAHRLGFTHALVPVDPGKVPAGMK 442 >tr|Q82EA5|Q82EA5_STRAW Tax_Id=33903 (radA)RecName: Full=DNA repair protein radA;[Streptomyces avermitilis] Length = 469 Score = 448 bits (1152), Expect = e-124 Identities = 244/467 (52%), Positives = 302/467 (64%), Gaps = 25/467 (5%) Query: 2 ANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQ 61 A R YRC +C + TAKW+GRCPEC +WGTVEE + R P T+ Sbjct: 8 AKDRPSYRCTECGWQTAKWLGRCPECQAWGTVEEYGTPAV---------RTTTPGRVTTS 58 Query: 62 AVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQS 121 A+PI V + R TG+ ELDRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA + A Sbjct: 59 ALPIGQVDGRQATARSTGVPELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAASD 118 Query: 122 GQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHI 181 R LY++GEESA Q+R+RADRI AID+ +YLAAE+DL AVL H+ Sbjct: 119 EHRTLYVTGEESASQVRMRADRI-------------KAIDD--HLYLAAETDLAAVLGHL 163 Query: 182 DTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGA 241 D V +L+I+DSVQT+++ E+DG GG K G + +LVGHVTKDG Sbjct: 164 DAVKPSLLIMDSVQTVASPEIDGAPGGVAQVREVAGALIRASKERGMSTLLVGHVTKDGT 223 Query: 242 IAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNL 301 IAGPR LEHLVDVVLHFEGDR+ LR+VRGVKNR+GA DEVGCF LHD GI G+ADPS L Sbjct: 224 IAGPRLLEHLVDVVLHFEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGL 283 Query: 302 FLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLE 361 FL +R PVPGT +TVTL+G+RPL+ EVQAL PRR SG++ +R +M+ AVLE Sbjct: 284 FLTRRAEPVPGTCLTVTLEGRRPLVAEVQALTVDTQIPTPRRTTSGLETSRVSMMLAVLE 343 Query: 362 KHARLS-LAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 + R+S L D+Y +TVGG+RL++P PLP V IGEVGLAG+ Sbjct: 344 QRGRISALGKRDIYSATVGGVRLSEPAADLAIALALASAASDAPLPKNLVAIGEVGLAGE 403 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAAL 467 +RRV G+ RRLAEA R GF ALVP +P+G++ L I AL Sbjct: 404 VRRVTGVQRRLAEAHRLGFTHALVPTDPGKIPSGMKVLEVADIGDAL 450 >tr|B5HYI2|B5HYI2_9ACTO Tax_Id=463191 RecName: Full=DNA repair protein radA;[Streptomyces sviceus ATCC 29083] Length = 469 Score = 446 bits (1147), Expect = e-123 Identities = 242/467 (51%), Positives = 304/467 (65%), Gaps = 25/467 (5%) Query: 2 ANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQ 61 A R YRC +C + TAKW+GRCPEC +WGT+EE + R P T+ Sbjct: 8 AKERPSYRCTECGWQTAKWLGRCPECQAWGTIEEYGAPAV---------RTTTPGRVTTS 58 Query: 62 AVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQS 121 AVPI V + R TG+ ELDRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA + A Sbjct: 59 AVPIGQVDGRQATARSTGVPELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKSASD 118 Query: 122 GQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHI 181 R LY++GEESA Q+R+RADRI AID+ ++YLAAE+DL AVL H+ Sbjct: 119 EHRTLYVTGEESASQVRMRADRI-------------RAIDD--QLYLAAETDLSAVLGHL 163 Query: 182 DTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGA 241 D V +L+I+DSVQT+++ E+DG GG K G + +LVGHVTKDGA Sbjct: 164 DAVKPSLLILDSVQTVASPEIDGAPGGMAQVREVAGALIRVSKERGMSTLLVGHVTKDGA 223 Query: 242 IAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNL 301 IAGPR LEHLVDVVL FEGDR+ LR+VRGVKNR+GA DEVGCF LHD GI G+ADPS L Sbjct: 224 IAGPRLLEHLVDVVLSFEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGL 283 Query: 302 FLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLE 361 FL +R PVPGT +TVTL+G+RPL+ EVQAL +PRR SG++ +R +M+ AVLE Sbjct: 284 FLTRRDEPVPGTCLTVTLEGRRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLE 343 Query: 362 KHARLS-LAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 + R+S L D+Y +TVGG++L++P PLP V IGEVGLAG+ Sbjct: 344 QRGRISALGKRDIYSATVGGVKLSEPAADLAIALALASAASDTPLPKNLVAIGEVGLAGE 403 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAAL 467 +RRV G+ RRL+EA R GF ALVP +PAG++ + I AL Sbjct: 404 VRRVTGVQRRLSEAHRLGFTHALVPGDPGKIPAGMKVMEVADIGDAL 450 >tr|Q9X8L5|Q9X8L5_STRCO Tax_Id=1902 RecName: Full=DNA repair protein radA;[Streptomyces coelicolor] Length = 469 Score = 446 bits (1146), Expect = e-123 Identities = 241/458 (52%), Positives = 299/458 (65%), Gaps = 25/458 (5%) Query: 2 ANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQ 61 A R YRC +C + TAKW+GRCPEC +WGTVEE + R P T+ Sbjct: 8 AKERPSYRCTECGWQTAKWLGRCPECQAWGTVEEYGAPAV---------RTTTPGRVTTS 58 Query: 62 AVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQS 121 AVPI V + R TG+ ELDRVLGGG+VPG+V L+AGEPGVGKSTLLL+VA + A Sbjct: 59 AVPIGQVDGRQATARSTGVPELDRVLGGGLVPGAVVLVAGEPGVGKSTLLLDVAAKSASD 118 Query: 122 GQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHI 181 R LY++GEESA Q+RLRADRI AID+ +YLAAE+DL AVL H+ Sbjct: 119 EHRTLYVTGEESASQVRLRADRI-------------HAIDD--HLYLAAETDLAAVLGHL 163 Query: 182 DTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGA 241 D V +L+I+DSVQT+++ E+DG GG K G + +LVGHVTKDGA Sbjct: 164 DAVKPSLLILDSVQTVASPEIDGAPGGMAQVREVAGALIRASKERGMSTLLVGHVTKDGA 223 Query: 242 IAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNL 301 IAGPR LEHLVDVVLHFEGDR+ LR+VRGVKNR+G DEVGCF LHD GI G+ADPS L Sbjct: 224 IAGPRLLEHLVDVVLHFEGDRHARLRLVRGVKNRYGTTDEVGCFELHDEGITGLADPSGL 283 Query: 302 FLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLE 361 FL +R PVPGT +TVTL+G+RPL+ EVQAL +PRR SG++ +R +M+ AVLE Sbjct: 284 FLTRRAEPVPGTCLTVTLEGRRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLE 343 Query: 362 KHARLS-LAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 + R+S L D+Y +TVGG++L++P PLP V IGEVGLAG+ Sbjct: 344 QRGRISALGKRDIYSATVGGVKLSEPAADLAVALALASAASDTPLPKNLVAIGEVGLAGE 403 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTL 458 +RRV G+ RRL+EA R GF ALVP VP G++ L Sbjct: 404 VRRVTGVQRRLSEAHRLGFTHALVPADPGRVPDGMKVL 441 >tr|C9NK14|C9NK14_9ACTO Tax_Id=591167 SubName: Full=DNA repair protein RadA; EC=2.1.1.63;[Streptomyces flavogriseus ATCC 33331] Length = 470 Score = 446 bits (1146), Expect = e-123 Identities = 248/480 (51%), Positives = 309/480 (64%), Gaps = 28/480 (5%) Query: 2 ANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQ 61 A R YRC +C + TAKW+GRCPEC +WGTVEE GG + A G +S Sbjct: 8 AKDRPSYRCTECGWTTAKWLGRCPECQAWGTVEEF------GGAPAVRTTAAGRV--SSA 59 Query: 62 AVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQS 121 A+PI V + R TG+ ELDRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA + A Sbjct: 60 ALPIGQVDSRQATARSTGVGELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAASD 119 Query: 122 GQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHI 181 R LY++ EESA Q+R+RADRI AI++ +YLAAE+DL AVL H+ Sbjct: 120 DHRTLYVTAEESASQVRMRADRI-------------RAIND--HLYLAAETDLSAVLGHL 164 Query: 182 DTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGA 241 D V +L+++DSVQT+++ E+DG GG K G + +LVGHVTKDGA Sbjct: 165 DAVKPSLLVLDSVQTVASPEIDGAPGGMAQVREVAGALIRASKERGMSTLLVGHVTKDGA 224 Query: 242 IAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNL 301 IAGPR LEHLVDVVL FEGDR+ LR+VRGVKNR+GA DEVGCF LHD GI G+ADPS L Sbjct: 225 IAGPRLLEHLVDVVLSFEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGL 284 Query: 302 FLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLE 361 FL +R PVPGT +TVTL+GKRPL+ EVQAL +PRR SG++ +R +M+ AVLE Sbjct: 285 FLTRRDEPVPGTCLTVTLEGKRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLE 344 Query: 362 KHARLS-LAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 + R+S L D+Y +TVGG++LT+P PLP V IGEVGLAG+ Sbjct: 345 QRGRISALGKRDIYSATVGGVKLTEPAADLAIALALASAASDTPLPKNLVAIGEVGLAGE 404 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRSVP 480 +RRV G+ RRLAEA R GF ALVP VPAG++ T VA + + + RS P Sbjct: 405 VRRVTGVQRRLAEAYRLGFKHALVPRDPGQVPAGMKV----TEVADMGDALRVLPRRSRP 460 >tr|C9Z0Q3|C9Z0Q3_STRSW Tax_Id=680198 SubName: Full=Putative DNA repair protein;[Streptomyces scabies] Length = 469 Score = 443 bits (1139), Expect = e-122 Identities = 239/458 (52%), Positives = 298/458 (65%), Gaps = 25/458 (5%) Query: 2 ANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQ 61 A R YRC +C + TAKW+GRCPEC +WGTV+E + R P T+ Sbjct: 8 AKDRPSYRCTECGWQTAKWLGRCPECQAWGTVDEYGTPAV---------RTTAPGRVTTS 58 Query: 62 AVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQS 121 AVPI V + R TG+ ELDRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA + A + Sbjct: 59 AVPIGQVDGRQATARTTGVPELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAADA 118 Query: 122 GQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHI 181 LY++GEESA Q+RLRADRIG A D +YLAAE+DL AVL H+ Sbjct: 119 ENPTLYVTGEESASQVRLRADRIG----ALHD-----------HLYLAAETDLSAVLGHL 163 Query: 182 DTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGA 241 D V +L+I+DSVQT+++ E+DG GG K G + +LVGHVTKDGA Sbjct: 164 DAVKPSLLILDSVQTVASPEIDGAPGGMAQVREVAGALIRASKERGMSTLLVGHVTKDGA 223 Query: 242 IAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNL 301 IAGPR LEHLVDVVLHFEGDR+ LR+VRGVKNR+GA DEVGCF LHD GI G+ DPS L Sbjct: 224 IAGPRLLEHLVDVVLHFEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLTDPSGL 283 Query: 302 FLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLE 361 FL +R PVPGT +TVTL+G+RPL+ EVQ+L +PRR SG++ +R +M+ AVLE Sbjct: 284 FLTRRDEPVPGTCLTVTLEGRRPLVAEVQSLTVDSQLPSPRRTTSGLETSRVSMMLAVLE 343 Query: 362 KHARLS-LAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 + R+S L D+Y +TVGG++L++P PLP V IGEVGLAG+ Sbjct: 344 QRGRISALGKRDIYSATVGGVKLSEPAADLAIALALASAATDTPLPKNLVAIGEVGLAGE 403 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTL 458 +RRV G+ RRL+EA R GF ALVP VP G++ L Sbjct: 404 VRRVTGVQRRLSEAHRLGFTHALVPSDPGKVPPGMKVL 441 >tr|B1VSK4|B1VSK4_STRGG Tax_Id=455632 RecName: Full=DNA repair protein radA;[Streptomyces griseus subsp. griseus] Length = 473 Score = 442 bits (1136), Expect = e-122 Identities = 247/475 (52%), Positives = 306/475 (64%), Gaps = 28/475 (5%) Query: 5 RLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVP 64 R YRC +C + TAKW+GRCPEC +WGTVEE GG+ R V T+ A+P Sbjct: 11 RPSYRCTECGWTTAKWLGRCPECQAWGTVEEF-------GGAPAVRTTAAGRVSTA-ALP 62 Query: 65 ISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQR 124 I V + R TG+ ELDRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA + A R Sbjct: 63 IGQVDSRTATARSTGVGELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAASDDHR 122 Query: 125 VLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTV 184 LY++ EESA Q+RLRADRI AI++ +YLAAE+DL AVL H+D V Sbjct: 123 TLYVTAEESASQVRLRADRI-------------RAIND--HLYLAAETDLSAVLGHLDAV 167 Query: 185 GSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIAG 244 +L+I+DSVQT+++ E+DG GG K G A +LVGHVTKDGAIAG Sbjct: 168 KPSLLILDSVQTVASPEIDGAPGGMAQVREVAGALIRASKERGMATLLVGHVTKDGAIAG 227 Query: 245 PRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFLD 304 PR LEHLVDVVL FEGDR+ LR+VRGVKNR+GA DEVGCF LHD GI G+ADPS LFL Sbjct: 228 PRLLEHLVDVVLSFEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGLFLT 287 Query: 305 QRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKHA 364 +R VPGT +TVTL+GKRPL+ EVQAL +PRR SG++ +R +M+ AVLE+ Sbjct: 288 RRDVAVPGTCLTVTLEGKRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLEQRG 347 Query: 365 RLS-LAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRR 423 R+S L D+Y +TVGG++LT+P PLP V IGEVGLAG++RR Sbjct: 348 RISALGKRDIYSATVGGVKLTEPAADLAIALALASAASDTPLPKNLVAIGEVGLAGEVRR 407 Query: 424 VNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMIDIADHRS 478 V G+ RRL+EA R GF ALVP VPAG++ T VA + + + RS Sbjct: 408 VTGVQRRLSEAHRLGFTHALVPTDPGKVPAGMKV----TEVADMGDALRVLPRRS 458 >tr|Q0S893|Q0S893_RHOSR Tax_Id=101510 (radA)RecName: Full=DNA repair protein radA;[Rhodococcus sp.] Length = 428 Score = 441 bits (1134), Expect = e-121 Identities = 235/439 (53%), Positives = 301/439 (68%), Gaps = 19/439 (4%) Query: 33 VEEVSVLSAVGG--GSRLGRRAHGPAVPTSQAVPISSVQPNLSRHRPTGIDELDRVLGGG 90 ++E ++++V G+ L + G +P++ A PI+ + +R +PTGIDELDRVLGGG Sbjct: 1 MDEAPIVASVASRPGASLAKAGAGAVLPSTPATPITRIDSTSTRAKPTGIDELDRVLGGG 60 Query: 91 VVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSG--QRVLYISGEESAGQIRLRADRIGCGG 148 VVPGSV LLAGEPGVGKSTLLLEV H+WA+ G R LY++GEESAGQ+RLRADR G Sbjct: 61 VVPGSVVLLAGEPGVGKSTLLLEVVHQWARRGPDDRSLYVTGEESAGQVRLRADRTGA-- 118 Query: 149 PAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTVGSALVIVDSVQTMSTSEVDGVTGG 208 + E +YLAAESDL +L H++ V L+IVDSVQTM ++VDGV GG Sbjct: 119 -----VHE--------RVYLAAESDLATILGHVEQVRPTLLIVDSVQTMLAADVDGVVGG 165 Query: 209 XXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIAGPRSLEHLVDVVLHFEGDRNGGLRM 268 K++G ++L+GHVTKDGA+AGPRSLEHLVDVVLHFEGD++ LRM Sbjct: 166 VTQVKAVTSALTSLAKASGVPVLLIGHVTKDGAVAGPRSLEHLVDVVLHFEGDKHSTLRM 225 Query: 269 VRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFLDQRPTPVPGTAITVTLDGKRPLIGE 328 VRGVKNRFGAADEVGCF L ++GI G++DPS LFL R VPGTA+TV +DGKRPL+GE Sbjct: 226 VRGVKNRFGAADEVGCFELREDGIAGISDPSGLFLHHRAEAVPGTAVTVMMDGKRPLLGE 285 Query: 329 VQALLATPNGGAPRRAVSGIDHARAAMISAVLEKHARLSLAVNDMYLSTVGGMRLTDPXX 388 VQAL+A + APRRAVSG+D AR AM+ AVL++ + +A ND+Y +TVGGMR+T+P Sbjct: 286 VQALVAATSMPAPRRAVSGLDSARVAMVLAVLDRRCGVPIAKNDVYAATVGGMRMTEPSA 345 Query: 389 XXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRRVNGMDRRLAEAARQGFNIALVPPGC 448 P+P V++GEVGLAG++RRV G+ RRLAEA R GF A+VP Sbjct: 346 DLALALAVASAVKDKPVPDGLVILGEVGLAGEVRRVPGVGRRLAEAHRLGFTRAIVPLDS 405 Query: 449 EAVPAGLRTLCAPTIVAAL 467 A P G++ + AA+ Sbjct: 406 GAAPKGMKVTEVGNLGAAI 424 >tr|D0L455|D0L455_GORB4 Tax_Id=526226 SubName: Full=DNA repair protein RadA;[Gordonia bronchialis] Length = 461 Score = 437 bits (1124), Expect = e-120 Identities = 241/469 (51%), Positives = 299/469 (63%), Gaps = 23/469 (4%) Query: 1 VANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTS 60 +A + +RC C AKWVGRCP+C WG+V+EV+ L A G A P+S Sbjct: 1 MAKPKSTFRCTACGRQVAKWVGRCPDCGEWGSVDEVTTLFAAGTS------ATAAVAPSS 54 Query: 61 QAVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQ 120 A I+ + S PTGI E DRVLG GVVPGSV LLAGEPGVGKSTLLLE WA Sbjct: 55 PARRITEIDAASSAAVPTGIGEFDRVLGRGVVPGSVILLAGEPGVGKSTLLLETVKHWAG 114 Query: 121 SGQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDH 180 G+ LYI+GEESAGQ+R+RA+R G + E +YLAAESDL +L Sbjct: 115 LGRTALYITGEESAGQVRMRAERTGA-------VHE--------NVYLAAESDLATILGQ 159 Query: 181 IDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDG 240 +D V +L+IVDSVQT+ + DGVTGG K+ G A+ILVGHVTKDG Sbjct: 160 VDAVRPSLMIVDSVQTVVATGADGVTGGVTQIRAVTTALVSLAKNRGIAVILVGHVTKDG 219 Query: 241 AIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSN 300 A+AGPRSLEHLVDVVL FEGDR+ LRMVRG+KNRFG ADEVGCF D+GI V DPS Sbjct: 220 AVAGPRSLEHLVDVVLSFEGDRHSTLRMVRGIKNRFGPADEVGCFEQRDDGIHQVTDPSG 279 Query: 301 LFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVL 360 +FL QR + V GTA VT+DGKRPL+GEVQ+L PRRAVSG+D AR AM+ AVL Sbjct: 280 IFLHQRDSDVSGTATMVTMDGKRPLVGEVQSLANGSQMATPRRAVSGMDSARVAMVLAVL 339 Query: 361 EKHARL-SLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAG 419 + L +A N++Y++TVGGMR+T+P P+P T + IGEVGLAG Sbjct: 340 QSRMGLEQIAKNEIYVATVGGMRVTEPAADLAIALAVHSAMTKRPVPATTIAIGEVGLAG 399 Query: 420 DLRRVNGMDRRLAEAARQGFNIALVPPGC-EAVPAGLRTLCAPTIVAAL 467 ++RRV+ + RR+AEA R GF A++P G E +P G+R ++AA+ Sbjct: 400 EVRRVSAVSRRIAEAQRLGFRHAIIPGGTDEKLPKGMRITRVGDLLAAV 448 >tr|B5HI60|B5HI60_STRPR Tax_Id=457429 RecName: Full=DNA repair protein radA;[Streptomyces pristinaespiralis ATCC 25486] Length = 480 Score = 437 bits (1124), Expect = e-120 Identities = 238/456 (52%), Positives = 298/456 (65%), Gaps = 25/456 (5%) Query: 2 ANARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQ 61 A R YRC +C + T KW+GRCPEC +WGTVEE G+ R V T+ Sbjct: 8 AKDRPSYRCTECGWTTVKWLGRCPECQAWGTVEEY--------GAPAVRTTAAGRVSTA- 58 Query: 62 AVPISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQS 121 A+PI V + R TG+DELDRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA + A Sbjct: 59 ALPIGQVDGRQATARSTGVDELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAASD 118 Query: 122 GQRVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHI 181 R LY++GEESA Q+RLRADRI A+ + +YLAAE+DL AVL H+ Sbjct: 119 EHRTLYVTGEESASQVRLRADRI-------------KALHD--HLYLAAETDLSAVLGHL 163 Query: 182 DTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGA 241 D V +L+++DSVQT+++ E+DG GG K G + +LVGHVTKDGA Sbjct: 164 DAVKPSLLVLDSVQTVASPEIDGAPGGMAQVREVAGALIRASKERGMSTLLVGHVTKDGA 223 Query: 242 IAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNL 301 IAGPR LEHLVDVVL FEGDR+ LR+VRGVKNR+GA DEVGCF LHD GI G+ADPS L Sbjct: 224 IAGPRLLEHLVDVVLSFEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGL 283 Query: 302 FLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLE 361 FL +R PVPGT +TVTL+G+RPL+ EVQAL +PRR SG++ +R +M+ AVLE Sbjct: 284 FLTRRDEPVPGTCLTVTLEGRRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLE 343 Query: 362 KHARL-SLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGD 420 + R+ +L D+Y +TVGG++L++P PLP V IGEVGLAG+ Sbjct: 344 QRGRITALGKRDIYSATVGGVKLSEPAADLAIALALASAASDVPLPKNLVAIGEVGLAGE 403 Query: 421 LRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLR 456 +RRV G+ RRLAEA R GF ALVP VP G++ Sbjct: 404 VRRVTGVQRRLAEAHRLGFTHALVPSDPGKVPPGMK 439 >tr|A8LF80|A8LF80_FRASN Tax_Id=298653 RecName: Full=DNA repair protein radA;[Frankia sp.] Length = 490 Score = 434 bits (1116), Expect = e-119 Identities = 240/473 (50%), Positives = 301/473 (63%), Gaps = 23/473 (4%) Query: 8 YRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGG--SRLGRRAH-GPAVP-TSQAV 63 +RC+ C +W GRCP C +WGT++ + GG LG G A P T+ A Sbjct: 32 FRCSACEAEAVRWAGRCPRCQAWGTLDAQAPAPRRAGGFSGGLGGTGRIGAAAPVTAPAT 91 Query: 64 PISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQ 123 P+++V +R RPTGI ELDRVLGGG+VPG+V LLAGEPGVGKSTLLLEVA R A +G Sbjct: 92 PVTAVDVTTARSRPTGIGELDRVLGGGIVPGAVILLAGEPGVGKSTLLLEVAARSAATGS 151 Query: 124 RVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDT 183 R L I+GEESA Q+RLRA R G P +++LAAE+DL AVL H++ Sbjct: 152 RSLVITGEESAAQVRLRAGRTGALHP---------------DLWLAAETDLGAVLTHVEQ 196 Query: 184 VGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIA 243 V AL++VDSVQT+S+S DG GG K+ G A +LVGHVTK+GA+A Sbjct: 197 VQPALLVVDSVQTISSSGFDGSAGGVTQVREVAGALIRTAKALGLATVLVGHVTKEGAVA 256 Query: 244 GPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFL 303 GPR LEHLVDVV+HFEG+R+ LR++R KNR+G ADEVGCF +HD+GI VADPS LFL Sbjct: 257 GPRLLEHLVDVVVHFEGERHSTLRLLRAGKNRYGPADEVGCFEMHDSGIREVADPSGLFL 316 Query: 304 DQR----PTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAV 359 + P VPGT +TVT++G+RPL+ EVQAL+A + PRRAVSG+D AR AMI AV Sbjct: 317 SRSGGAGPAAVPGTCVTVTVEGRRPLVAEVQALVAEASAQVPRRAVSGLDAARVAMILAV 376 Query: 360 LEKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAG 419 +E+ AR+ D+Y +TVGG+RL +P PLP V IGEVGLAG Sbjct: 377 VERRARVRFGRADVYTATVGGVRLAEPAADLAVALATVSAARDRPLPGDLVAIGEVGLAG 436 Query: 420 DLRRVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHMID 472 ++R V + RLA AAR GF ALVP G P GL P ++AA+ HM D Sbjct: 437 EVRSVGAVRARLAAAARLGFRRALVPTGSGEAPEGLTVQEVPDLIAAIAHMYD 489 >tr|Q2J538|Q2J538_FRASC Tax_Id=106370 RecName: Full=DNA repair protein radA;[Frankia sp.] Length = 485 Score = 427 bits (1098), Expect = e-117 Identities = 230/467 (49%), Positives = 293/467 (62%), Gaps = 19/467 (4%) Query: 8 YRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVPISS 67 +RC C + +W GRC C WGT+E + G G G R+ A T+ A+P+ S Sbjct: 31 FRCNSCGSESVRWAGRCSRCQEWGTLEAQAPAPRRGAGLVAGGRSASSAAVTAPALPVMS 90 Query: 68 VQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQRVLY 127 V +R RPTGIDELDRVLGGG+VPG+V LLAGEPGVGKSTLLLEVA R A +G R L Sbjct: 91 VDVTATRRRPTGIDELDRVLGGGLVPGAVILLAGEPGVGKSTLLLEVAARSAAAGARALV 150 Query: 128 ISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTVGSA 187 ++GEESA Q+RLRA R G ++++AAE+DL AVL H++ V A Sbjct: 151 VTGEESAAQVRLRAGRTGA---------------LHEDLWIAAETDLGAVLRHVEEVSPA 195 Query: 188 LVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIAGPRS 247 L++VDSVQT+S + VDG GG K+ G +LVGHVTKDG +AGPR Sbjct: 196 LLVVDSVQTISAAGVDGAAGGVTQVREVTAALIRTAKALGLVTVLVGHVTKDGLVAGPRL 255 Query: 248 LEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFLDQRP 307 LEHLVDVVLHFEG+R+ LR+VR KNR+G ADEVGCF + D+GI G+ADPS LFL + Sbjct: 256 LEHLVDVVLHFEGERHSALRLVRAGKNRYGPADEVGCFEMDDSGIHGIADPSGLFLSRSS 315 Query: 308 ----TPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKH 363 VPGT +TVT++G+RPL+ EVQAL+A + PRRAVSG+D AR AMI AV+E+ Sbjct: 316 GAGLEAVPGTCVTVTVEGRRPLVAEVQALVAETSAQIPRRAVSGLDPARVAMILAVVERR 375 Query: 364 ARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRR 423 A++ D+Y +TVGG+RL +P PLP V IGEVGLAG++R Sbjct: 376 AKVRFGRADVYAATVGGVRLAEPAADLATALAIVSAARDRPLPADLVAIGEVGLAGEVRA 435 Query: 424 VNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHM 470 V + +RLA AAR GF ALVP P G++ P ++ A+ M Sbjct: 436 VGSVRQRLAAAARLGFRRALVPADPGPAPDGMKVTEVPDLIGAISKM 482 >tr|A4XCP0|A4XCP0_SALTO Tax_Id=369723 RecName: Full=DNA repair protein radA;[Salinispora tropica] Length = 481 Score = 426 bits (1095), Expect = e-117 Identities = 227/454 (50%), Positives = 289/454 (63%), Gaps = 22/454 (4%) Query: 5 RLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVP 64 R Y C C + KWVGRCPEC WG+V E ++ G + R +P A P Sbjct: 23 RPAYECDACGHQPPKWVGRCPECGEWGSVVECTLTGPTVSGRVVSSR-----MPAEPARP 77 Query: 65 ISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQR 124 I+++ +R RPTG+ ELDRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA +WA G Sbjct: 78 IATISAAPARARPTGVSELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAQQWAAGGAN 137 Query: 125 V-LYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDT 183 L +SGEES Q+RLRA+R+G ++YLAAESDL AVL H+D Sbjct: 138 PSLVVSGEESVSQVRLRAERMGA---------------LHEQLYLAAESDLAAVLGHLDA 182 Query: 184 VGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIA 243 V L+++DSVQT+ST+ +GV GG K G A +LVGHVTKDG +A Sbjct: 183 VKPGLLVLDSVQTISTTGTEGVPGGVTQVRAVTAALVAVAKERGIATLLVGHVTKDGQVA 242 Query: 244 GPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFL 303 GPR LEHLVDVVLHFEGD++ LR+VRGVKNRFGAADEVGCF +H+ GI +ADPS LFL Sbjct: 243 GPRVLEHLVDVVLHFEGDKHSSLRLVRGVKNRFGAADEVGCFEMHEGGISSLADPSGLFL 302 Query: 304 DQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKH 363 + PVPGT +TV ++G+R L+ EVQAL+ G+PRR VSG+D AR AM+ AVL++ Sbjct: 303 TRYSEPVPGTCVTVAMEGRRALVTEVQALIGATVAGSPRRTVSGLDSARLAMVLAVLQRR 362 Query: 364 A-RLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLR 422 RL+L +++ +TVGG+R+ +P + V IGEVGL G++R Sbjct: 363 TERLTLHDREVFAATVGGIRVVEPAADLAVALAVASGGLNLAITPHLVAIGEVGLTGEVR 422 Query: 423 RVNGMDRRLAEAARQGFNIALVPPGCEAVPAGLR 456 RV + RRLAEA R GF +ALVPPGC G+R Sbjct: 423 RVGAVPRRLAEATRLGFRLALVPPGCGPESTGVR 456 >tr|C1YIG5|C1YIG5_NOCDA Tax_Id=446468 RecName: Full=DNA repair protein radA;[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 463 Score = 426 bits (1095), Expect = e-117 Identities = 233/442 (52%), Positives = 287/442 (64%), Gaps = 25/442 (5%) Query: 4 ARLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAV 63 A+ +RCA+C + T KWVGRC EC +WGTVEE + A PA TS+A Sbjct: 8 AKTTFRCAECGWSTLKWVGRCGECQAWGTVEEAGAPAP---------SAVAPAPVTSRAR 58 Query: 64 PISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQ 123 PI+ + + PTG+DELDRVLGGG VPG V LLAGEPGVGKSTLLLEVA A G Sbjct: 59 PITEISVESAEAVPTGVDELDRVLGGGAVPGGVVLLAGEPGVGKSTLLLEVAAMRAAEGP 118 Query: 124 RVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDT 183 VLY++GEESAGQ+RLRA+R+G S ++YLAAE+ + A+ H+D Sbjct: 119 -VLYVTGEESAGQVRLRAERLGA---------------LSDKLYLAAETSIAALASHVDA 162 Query: 184 VGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIA 243 VG L+IVDSVQTM + + GV GG K G A +LVGHVTKDG+IA Sbjct: 163 VGPRLLIVDSVQTMVSPDASGVPGGVTQIRQVTGALIQIAKERGIATVLVGHVTKDGSIA 222 Query: 244 GPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFL 303 GPR LEHLVDVVLHFEG+R+ LR++R VKNR+G DE+GCF L ++GI G+ DPS LFL Sbjct: 223 GPRMLEHLVDVVLHFEGERHSQLRLLRAVKNRYGPTDEIGCFELTESGIVGLPDPSGLFL 282 Query: 304 DQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKH 363 +R PVPGT +TVTL+G+RPLI EVQAL+A APRRA SG+D +R MI AVLEK Sbjct: 283 TERTDPVPGTCVTVTLEGRRPLITEVQALVAPTPLPAPRRATSGLDTSRVNMILAVLEKR 342 Query: 364 ARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRR 423 + LA D+Y STVGG++LT+P LP + IGEVGLAGD+R Sbjct: 343 TGMKLANMDVYASTVGGVKLTEPAVDLALAMAAASSNNDVALPVGFIAIGEVGLAGDVRT 402 Query: 424 VNGMDRRLAEAARQGFNIALVP 445 V+G+ RR+AEA R GF A+VP Sbjct: 403 VSGVRRRVAEAQRLGFTEAVVP 424 >tr|C4RE09|C4RE09_9ACTO Tax_Id=219305 RecName: Full=DNA repair protein radA;[Micromonospora sp. ATCC 39149] Length = 480 Score = 424 bits (1091), Expect = e-116 Identities = 230/452 (50%), Positives = 291/452 (64%), Gaps = 22/452 (4%) Query: 5 RLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVP 64 R Y C C + KWVGRCPEC WG+V E +V G + R +P A P Sbjct: 22 RPAYECDACGHQPPKWVGRCPECGEWGSVVECTVTGPTVSGRVVSSR-----MPAEPARP 76 Query: 65 ISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQS-GQ 123 I+++ ++ RPTG+ ELDRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA +WA + G Sbjct: 77 IATISAAPAKARPTGVSELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAQQWAATAGS 136 Query: 124 RVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDT 183 L +SGEES Q+RLRA+R+ A D +++LAAESDL AVL H+D Sbjct: 137 PSLVVSGEESVSQVRLRAERMN----ALHD-----------QLWLAAESDLGAVLGHLDA 181 Query: 184 VGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIA 243 V L+++DSVQT+ST +GV GG K G A +LVGHVTKDG +A Sbjct: 182 VKPGLLVLDSVQTISTPGTEGVPGGVTQVRAVTAALVAVAKDRGVATVLVGHVTKDGQVA 241 Query: 244 GPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFL 303 GPR LEHLVDVVLHFEGD++ LRMVRGVKNRFGAADEVGCF +H+ GI +ADPS LFL Sbjct: 242 GPRVLEHLVDVVLHFEGDKHSSLRMVRGVKNRFGAADEVGCFEMHEGGISSLADPSGLFL 301 Query: 304 DQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKH 363 + PVPGT +TV ++G+R L+ EVQAL+ G+PRR VSG+D AR AM+ AVL++ Sbjct: 302 TRYSEPVPGTCVTVAMEGRRALVTEVQALIGATVAGSPRRTVSGLDGARLAMVLAVLQRR 361 Query: 364 A-RLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLR 422 A RL+L +++ +TVGG+R+ +P + V IGEVGL G++R Sbjct: 362 AERLTLHDREVFAATVGGIRVVEPAADLAVALAVASGGLNLAINPHLVAIGEVGLTGEVR 421 Query: 423 RVNGMDRRLAEAARQGFNIALVPPGCEAVPAG 454 RV + RRLAEAAR GF +ALVPPGC AG Sbjct: 422 RVGAVPRRLAEAARLGFRVALVPPGCGPESAG 453 >tr|Q0RBN3|Q0RBN3_FRAAA Tax_Id=326424 RecName: Full=DNA repair protein radA;[Frankia alni] Length = 485 Score = 423 bits (1088), Expect = e-116 Identities = 229/467 (49%), Positives = 290/467 (62%), Gaps = 19/467 (4%) Query: 8 YRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVPISS 67 +RC+ C +W GRCP C WGT+E + G RA T+ A P+ S Sbjct: 31 FRCSGCGAEFVRWAGRCPRCQEWGTLEAQAPAPRRAAGLGGAGRAVAATEVTAPAQPVVS 90 Query: 68 VQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQRVLY 127 V +R RPTGIDELDRVLGGG+VPG+V LLAGEPGVGKSTLLLEVA R A G R L Sbjct: 91 VDVTAARRRPTGIDELDRVLGGGLVPGAVILLAGEPGVGKSTLLLEVAARSAAGGARALV 150 Query: 128 ISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTVGSA 187 ++GEESA Q+RLRA R G ++++AAE+DL AVL H++ V A Sbjct: 151 VTGEESAAQVRLRAGRTGA---------------LHEDLWIAAETDLGAVLRHVEEVSPA 195 Query: 188 LVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIAGPRS 247 L++VDSVQT+S + V+G GG K+ G A +LVGHVTKDG +AGPR Sbjct: 196 LLVVDSVQTISAAGVEGAAGGVTQVREVTAALIRTAKALGLATVLVGHVTKDGLVAGPRL 255 Query: 248 LEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFLDQRP 307 LEHLVDVVLHFEG+R+ LR+VR KNR+G ADEVGCF + D GI G+ADPS LFL + Sbjct: 256 LEHLVDVVLHFEGERHSALRLVRAGKNRYGPADEVGCFEMDDAGIHGIADPSGLFLSRSG 315 Query: 308 T----PVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKH 363 VPGT +TVT++G+RPL+ EVQAL+A + PRRAVSG+D AR AMI AV+E+ Sbjct: 316 AGGLEAVPGTCVTVTVEGRRPLVAEVQALVAETSAQVPRRAVSGLDPARVAMILAVVERR 375 Query: 364 ARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRR 423 A++ D+Y +TVGG+RL +P PLP V +GEVGLAG++R Sbjct: 376 AKVRFGKADVYAATVGGVRLAEPAADLATALAVVSAARDRPLPADLVAVGEVGLAGEVRA 435 Query: 424 VNGMDRRLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALEHM 470 V + +RLA AAR GF ALVP G P G++ P ++ A+ M Sbjct: 436 VGAVRQRLAAAARLGFRRALVPAGAGPGPEGMKVTEVPDLIGAITRM 482 >tr|C7NFR2|C7NFR2_KYTSD Tax_Id=478801 RecName: Full=DNA repair protein radA;[Kytococcus sedentarius] Length = 461 Score = 422 bits (1086), Expect = e-116 Identities = 231/470 (49%), Positives = 294/470 (62%), Gaps = 30/470 (6%) Query: 5 RLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVP 64 R YRC++C + T KW+GRC EC +WGT+ E GG GR +V A P Sbjct: 13 RESYRCSECGWTTVKWIGRCKECQAWGTLVEA-------GGRPAGRTTPAASV-REPARP 64 Query: 65 ISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQR 124 I V + S H TG++E DRVLGGG+VPG V L+AG+PG+GKSTLLL+VA R A G Sbjct: 65 IGEVDLSASEHHATGVEEFDRVLGGGMVPGGVVLVAGDPGIGKSTLLLDVAARVAAGGGP 124 Query: 125 VLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTV 184 LY+SGEESA Q+R+RA+RIG A+ + +YLA+E+DL AVL H++ V Sbjct: 125 ALYVSGEESAAQVRMRAERIG-------------AVTDG--LYLASETDLAAVLAHLEAV 169 Query: 185 GSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIAG 244 LV++DSVQT+S+ EVDG G K G A +LVGHVTK+GAIAG Sbjct: 170 QPRLVVLDSVQTISSQEVDGAAGNVAQVREVAASVIREAKHRGIATVLVGHVTKEGAIAG 229 Query: 245 PRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFLD 304 PR LEHLVDVV+ FEG+R+ LR++R VKNRFG DEVGCF L ++GI G+ADPS LF+ Sbjct: 230 PRVLEHLVDVVVTFEGERHSRLRLIRAVKNRFGPTDEVGCFDLDESGITGLADPSGLFVS 289 Query: 305 QRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKHA 364 + PVPGT +TVTL+G+RPL+ EVQAL +PRR SG+D +R AM AVL +H Sbjct: 290 RHAAPVPGTCLTVTLEGRRPLVAEVQALAVPTQAPSPRRTTSGVDSSRVAMTVAVLNRHG 349 Query: 365 RLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRRV 424 + LA +D+Y+STVGG+RL++P LP V IGEVGLAGDLR Sbjct: 350 GVPLATSDVYVSTVGGVRLSEPSTDLAVALALASSLADQALPDGLVAIGEVGLAGDLRNA 409 Query: 425 NGMDRRLAEAARQGFNIALVPPGC---EAVPAGLRTLCAPTIVAALEHMI 471 G RRL EA R GF+ A++P G + PAG++ A T LEH I Sbjct: 410 PGTGRRLVEAHRIGFDKAVIPRGALGDQQAPAGMKVFQADT----LEHAI 455 >tr|D1BB82|D1BB82_9MICO Tax_Id=446469 SubName: Full=DNA repair protein RadA;[Sanguibacter keddieii DSM 10542] Length = 473 Score = 421 bits (1082), Expect = e-115 Identities = 228/462 (49%), Positives = 292/462 (63%), Gaps = 23/462 (4%) Query: 8 YRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVPISS 67 YRC +C + T+KWVGRC EC WG+V E + ++ G + A S A PI Sbjct: 20 YRCTECGWTTSKWVGRCGECQEWGSVTEAAAAAS-------GPKTVASAPTRSVAQPIGE 72 Query: 68 VQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQRVLY 127 + + ++ PTGI E DRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA A++G+RVLY Sbjct: 73 IDVDSAQAAPTGISEFDRVLGGGIVPGAVVLLAGEPGVGKSTLLLDVASTTARAGRRVLY 132 Query: 128 ISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTVGSA 187 I+GEESAGQ+RLRA+RI P + LAAE+DL VL I+ Sbjct: 133 ITGEESAGQVRLRAERIDALAPT---------------LLLAAETDLGQVLGQIEATDPD 177 Query: 188 LVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIAGPRS 247 L+IVDSVQT+++++VDG GG K ++LVGHVTKDGA+AGPR+ Sbjct: 178 LLIVDSVQTVASAQVDGSPGGVGQVREVASALIAAAKGRNMPVVLVGHVTKDGAVAGPRT 237 Query: 248 LEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFLDQRP 307 LEHLVDVVL FEGDR+ LRMVR VKNR+G DEVGCF L ++GI G+ADPS LFL Sbjct: 238 LEHLVDVVLQFEGDRHSRLRMVRAVKNRYGPTDEVGCFELTEDGIAGLADPSGLFLSHIN 297 Query: 308 TPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKHARLS 367 VPGT +TVTL+G+RPL E+Q+L+ PRR SGID +R AMI AV+ +H Sbjct: 298 LAVPGTCVTVTLEGRRPLALEIQSLVVASPLANPRRTTSGIDSSRLAMILAVIHRHLGAR 357 Query: 368 LAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRRVNGM 427 L D+Y+ST+GG R+T+P P+P + IGEVGLAG+LR V+G+ Sbjct: 358 LTDADVYVSTIGGARVTEPAADLAIALATLSALENKPVPVGTIAIGEVGLAGELRAVSGI 417 Query: 428 DRRLAEAARQGFNIALVPPGCEA-VPAGLRTLCAPTIVAALE 468 RRL+EAAR GF A+VPPG PAG+ L A + A++ Sbjct: 418 SRRLSEAARLGFTRAVVPPGTSGPAPAGMTLLPAANLAEAVQ 459 >tr|C2GEE6|C2GEE6_9CORY Tax_Id=548478 RecName: Full=DNA repair protein radA;[Corynebacterium glucuronolyticum ATCC 51866] Length = 457 Score = 419 bits (1077), Expect = e-115 Identities = 223/459 (48%), Positives = 289/459 (62%), Gaps = 15/459 (3%) Query: 10 CADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVPISSVQ 69 C +C Y T KW+GRCPEC +WGT+EE +V ++ G R PTS A PI+ V+ Sbjct: 11 CTECGYSTPKWLGRCPECGAWGTLEEQAVATSPSGSRSRQARTIQALTPTSPATPITKVK 70 Query: 70 PNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQRVLYIS 129 ++ PTGI ELDRVLG G+V GSV LLAGEPGVGKSTLLLEVA RWA G+ LY++ Sbjct: 71 GATAKAVPTGIGELDRVLGAGIVKGSVVLLAGEPGVGKSTLLLEVASRWASLGRTALYVT 130 Query: 130 GEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTVGSALV 189 EESAGQ+R+RA+R G A+ ++ ++LAAES+L V H++ V +LV Sbjct: 131 AEESAGQVRMRAERTG-------------ALHDT--LFLAAESNLDVVAGHVNQVKPSLV 175 Query: 190 IVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIAGPRSLE 249 IVDSVQTM V+GV GG K+ G L+LVGHVTKDG +AGPR LE Sbjct: 176 IVDSVQTMHAPGVEGVAGGVAQSRAVTAQLTALAKTTGIPLLLVGHVTKDGNVAGPRVLE 235 Query: 250 HLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFLDQRPTP 309 HLVDVVL+FEGD N LRM+RG+KNRFGA DEVGCF +GI+ V DPS LFL R Sbjct: 236 HLVDVVLNFEGDTNSNLRMLRGIKNRFGATDEVGCFEQQSDGIKEVEDPSGLFLSHRDAT 295 Query: 310 VPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKHARLSLA 369 GTA+TV +DG RP++ EVQAL+ PRR V+G+D+ R M+ AVL+ A + + Sbjct: 296 PDGTAVTVAMDGVRPMLAEVQALMVETQTKNPRRQVTGLDYNRVPMVLAVLQSRAGVKTS 355 Query: 370 VNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRRVNGMDR 429 D Y++TVGGM++ +P LP V++GEVGLAG++RRV + R Sbjct: 356 DKDAYVATVGGMKIKEPATDLAVALATASAMKKTSLPARLVVLGEVGLAGEIRRVPNITR 415 Query: 430 RLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALE 468 RL EAAR G+ +A++P G + AG+ T+ AL+ Sbjct: 416 RLQEAARLGYKMAIIPAGDKPKVAGMGVRQVATLTEALK 454 >tr|C0VXL0|C0VXL0_9CORY Tax_Id=548477 RecName: Full=DNA repair protein radA;[Corynebacterium glucuronolyticum ATCC 51867] Length = 457 Score = 419 bits (1077), Expect = e-115 Identities = 223/459 (48%), Positives = 289/459 (62%), Gaps = 15/459 (3%) Query: 10 CADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVPISSVQ 69 C +C Y T KW+GRCPEC +WGT+EE +V ++ G R PTS A PI+ V+ Sbjct: 11 CTECGYSTPKWLGRCPECGAWGTLEEQAVATSPSGSRSRQARTIQALTPTSPATPITKVK 70 Query: 70 PNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQRVLYIS 129 ++ PTGI ELDRVLG G+V GSV LLAGEPGVGKSTLLLEVA RWA G+ LY++ Sbjct: 71 GATAKAVPTGIGELDRVLGAGIVKGSVVLLAGEPGVGKSTLLLEVASRWASLGRTALYVT 130 Query: 130 GEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDTVGSALV 189 EESAGQ+R+RA+R G A+ ++ ++LAAES+L V H++ V +LV Sbjct: 131 AEESAGQVRMRAERTG-------------ALHDT--LFLAAESNLDVVAGHVNQVKPSLV 175 Query: 190 IVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIAGPRSLE 249 IVDSVQTM V+GV GG K+ G L+LVGHVTKDG +AGPR LE Sbjct: 176 IVDSVQTMHAPGVEGVAGGVAQSRAVTAQLTALAKTTGIPLLLVGHVTKDGNVAGPRVLE 235 Query: 250 HLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFLDQRPTP 309 HLVDVVL+FEGD N LRM+RG+KNRFGA DEVGCF +GI+ V DPS LFL R Sbjct: 236 HLVDVVLNFEGDTNSNLRMLRGIKNRFGATDEVGCFEQQSDGIKEVEDPSGLFLSHRDAT 295 Query: 310 VPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKHARLSLA 369 GTA+TV +DG RP++ EVQAL+ PRR V+G+D+ R M+ AVL+ A + + Sbjct: 296 PDGTAVTVAMDGVRPMLAEVQALMVETQTKNPRRQVTGLDYNRVPMVLAVLQSRAGVKTS 355 Query: 370 VNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLRRVNGMDR 429 D Y++TVGGM++ +P LP V++GEVGLAG++RRV + R Sbjct: 356 DKDAYVATVGGMKIKEPATDLAVALATASAMKKTSLPARLVVLGEVGLAGEIRRVPNITR 415 Query: 430 RLAEAARQGFNIALVPPGCEAVPAGLRTLCAPTIVAALE 468 RL EAAR G+ +A++P G + AG+ T+ AL+ Sbjct: 416 RLQEAARLGYKMAIIPAGDKPKVAGMGVRQVATLTEALK 454 >tr|A8M7T6|A8M7T6_SALAI Tax_Id=391037 RecName: Full=DNA repair protein radA;[Salinispora arenicola] Length = 499 Score = 418 bits (1074), Expect = e-115 Identities = 231/471 (49%), Positives = 296/471 (62%), Gaps = 27/471 (5%) Query: 5 RLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVP 64 R Y C C + KW GRCPEC WG+V E ++ G + R +P A P Sbjct: 23 RPAYECDACGHQPPKWFGRCPECGEWGSVVECTMTGPTVSGRVVSSR-----LPAEPARP 77 Query: 65 ISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQR 124 I+++ ++ RPTG+ ELDRVLGGG+VPG+V LLAGEPGVGKSTLLL+VA +WA G Sbjct: 78 IATISAAPAQARPTGVSELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAQQWAVGGTS 137 Query: 125 V-LYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLDHIDT 183 L +SGEES Q+RLRA+R+G ++YLAAESDL AVL H+D Sbjct: 138 PSLVVSGEESVSQVRLRAERMGT---------------LHDQLYLAAESDLAAVLGHLDA 182 Query: 184 VGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKDGAIA 243 V L+++DSVQT+ST+ +GV GG K G A +LVGHVTKDG +A Sbjct: 183 VKPGLLVLDSVQTISTTGTEGVPGGVTQVRAVTAALVAVAKERGIATLLVGHVTKDGQVA 242 Query: 244 GPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPSNLFL 303 GPR LEHLVDVVLHFEGD++ LR+VRGVKNRFGAADEVGCF +H+ GI +ADPS LFL Sbjct: 243 GPRVLEHLVDVVLHFEGDKHSSLRLVRGVKNRFGAADEVGCFEMHEGGISSLADPSGLFL 302 Query: 304 DQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAVLEKH 363 + PVPGT +TV ++G+R L+ EVQAL+ G+PRR VSG+D AR AM+ AVL++ Sbjct: 303 TRYSEPVPGTCVTVAMEGRRALVTEVQALIGATVAGSPRRTVSGLDSARLAMVLAVLQRR 362 Query: 364 A-RLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAGDLR 422 RL+L +++ +TVGG+R+ +P + V IGEVGL G++R Sbjct: 363 TERLTLHDREVFAATVGGIRVVEPAADLAVALAVASGGLNLAIAPHLVAIGEVGLTGEVR 422 Query: 423 RVNGMDRRLAEAARQGFNIALVPPG----CEAVPAG-LRTLCAPTIVAALE 468 RV + RRLAEAAR GF +ALVPPG VPA LR + + AAL+ Sbjct: 423 RVGAVPRRLAEAARLGFRLALVPPGSGPESTGVPADQLRVIEVGDVRAALQ 473 >tr|A3TNA1|A3TNA1_9MICO Tax_Id=313589 RecName: Full=DNA repair protein radA;[Janibacter sp. HTCC2649] Length = 463 Score = 417 bits (1072), Expect = e-114 Identities = 233/471 (49%), Positives = 294/471 (62%), Gaps = 32/471 (6%) Query: 5 RLQYRCADCRYLTAKWVGRCPECSSWGTVEEVSVLSAVGGGSRLGRRAHGPAVPTSQAVP 64 R YRC +C + T KWVGRC EC +WG+V EV ++A ++ R AVP Sbjct: 7 RPAYRCTECGWTTVKWVGRCGECQAWGSVAEVGAVAARTAAAKSVERP---------AVP 57 Query: 65 ISSVQPNLSRHRPTGIDELDRVLGGGVVPGSVTLLAGEPGVGKSTLLLEVAHRWAQSGQ- 123 I V + + R TG+ E DRVLGGG+VPG+V L+AGEPG+GKSTLLL+VA R A+ G+ Sbjct: 58 IGEVDVSRAEARGTGVPEFDRVLGGGLVPGAVVLVAGEPGIGKSTLLLDVAGRAARGGEP 117 Query: 124 ----RVLYISGEESAGQIRLRADRIGCGGPAAPDISEVSAIDNSAEIYLAAESDLHAVLD 179 RVLY+SGEESA Q+R RA+RI + ++LA+E+DL VL Sbjct: 118 GQERRVLYVSGEESAAQVRSRAERIEA---------------MARTLFLASETDLATVLG 162 Query: 180 HIDTVGSALVIVDSVQTMSTSEVDGVTGGXXXXXXXXXXXXXXXKSNGFALILVGHVTKD 239 ID V LVIVDSVQT+S++EV+G G K+ G A++LVGHVTKD Sbjct: 163 QIDQVEPELVIVDSVQTISSAEVEGAAGNVSQVREVAASLIAVAKARGIAVLLVGHVTKD 222 Query: 240 GAIAGPRSLEHLVDVVLHFEGDRNGGLRMVRGVKNRFGAADEVGCFLLHDNGIEGVADPS 299 G+IAGPR LEHLVDVV+ FEGDR+ LR+VR VKNR+G DEVGCF L D GI G+ADPS Sbjct: 223 GSIAGPRVLEHLVDVVVQFEGDRHSRLRLVRAVKNRYGPTDEVGCFDLSDIGITGLADPS 282 Query: 300 NLFLDQRPTPVPGTAITVTLDGKRPLIGEVQALLATPNGGAPRRAVSGIDHARAAMISAV 359 LFL R VPGT +TVTL+G+RPL+ EVQAL+ PRRA SG+D +R MI AV Sbjct: 283 GLFLSNRTAAVPGTCVTVTLEGRRPLVTEVQALVDQTEMPNPRRATSGLDSSRVGMILAV 342 Query: 360 LEKHARLSLAVNDMYLSTVGGMRLTDPXXXXXXXXXXXXXXXXXPLPTTAVMIGEVGLAG 419 L A+ + D+++STVGG+R+T+P PLP V GEVGLAG Sbjct: 343 LGTRAKAPIGRKDVFVSTVGGVRITEPAADLALTLALASAINDQPLPVGTVAFGEVGLAG 402 Query: 420 DLRRVNGMDRRLAEAARQGFNIALVPPGC---EAVPAGLRTLCAPTIVAAL 467 +LR V G RRLAEA+R GF A+VPPG VP GLR + T++ A+ Sbjct: 403 ELRPVTGAHRRLAEASRLGFTTAIVPPGVLGGGPVPDGLRVIEVSTVLEAV 453 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.318 0.136 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 3,494,876,255 Number of extensions: 145193575 Number of successful extensions: 538948 Number of sequences better than 10.0: 3733 Number of HSP's gapped: 538562 Number of HSP's successfully gapped: 3912 Length of query: 491 Length of database: 3,846,993,858 Length adjustment: 142 Effective length of query: 349 Effective length of database: 2,245,915,032 Effective search space: 783824346168 Effective search space used: 783824346168 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 82 (36.2 bits)