BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_5136
         (405 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HJ77|B2HJ77_MYCMM Tax_Id=216594 SubName: Full=Conserved pro...   595   e-168
tr|A0PV82|A0PV82_MYCUA Tax_Id=362242 SubName: Full=Conserved pro...   588   e-166
tr|C6DMU5|C6DMU5_MYCTK Tax_Id=478434 SubName: Full=DNA polymeras...   502   e-140
tr|Q7D554|Q7D554_MYCTU Tax_Id=1773 (holB)SubName: Full=DNA polym...   502   e-140
tr|Q7TW17|Q7TW17_MYCBO Tax_Id=1765 SubName: Full=DNA POLYMERASE;...   502   e-140
tr|O06363|O06363_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE DNA PO...   502   e-140
tr|C1AI96|C1AI96_MYCBT Tax_Id=561275 SubName: Full=DNA polymeras...   502   e-140
tr|A5U8W8|A5U8W8_MYCTA Tax_Id=419947 SubName: Full=DNA polymeras...   502   e-140
tr|A1KPX3|A1KPX3_MYCBP Tax_Id=410289 SubName: Full=DNA polymeras...   502   e-140
tr|A5WTK9|A5WTK9_MYCTF Tax_Id=336982 SubName: Full=Hypothetical ...   502   e-140
tr|A4KMB6|A4KMB6_MYCTU Tax_Id=395095 SubName: Full=Hypothetical ...   500   e-139
tr|Q744B4|Q744B4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   500   e-139
tr|A0QA63|A0QA63_MYCA1 Tax_Id=243243 SubName: Full=DNA polymeras...   493   e-137
tr|A1TG65|A1TG65_MYCVP Tax_Id=350058 SubName: Full=DNA polymeras...   486   e-135
tr|O69546|O69546_MYCLE Tax_Id=1769 (MLCB2548.29c)SubName: Full=P...   484   e-134
tr|B8ZU29|B8ZU29_MYCLB Tax_Id=561304 SubName: Full=Putative unch...   484   e-134
tr|A4T5R0|A4T5R0_MYCGI Tax_Id=350054 SubName: Full=DNA polymeras...   483   e-134
tr|A0R5D5|A0R5D5_MYCS2 Tax_Id=246196 SubName: Full=DNA polymeras...   476   e-132
tr|Q1B2I6|Q1B2I6_MYCSS Tax_Id=164756 SubName: Full=DNA polymeras...   473   e-131
tr|A1UML2|A1UML2_MYCSK Tax_Id=189918 SubName: Full=DNA polymeras...   473   e-131
tr|A3Q717|A3Q717_MYCSJ Tax_Id=164757 SubName: Full=DNA polymeras...   473   e-131
tr|B1MGQ6|B1MGQ6_MYCA9 Tax_Id=561007 SubName: Full=Probable DNA ...   426   e-117
tr|Q5Z2Y1|Q5Z2Y1_NOCFA Tax_Id=37329 SubName: Full=Putative DNA p...   389   e-106
tr|Q0S8J2|Q0S8J2_RHOSR Tax_Id=101510 SubName: Full=Probable DNA-...   387   e-105
tr|C1BA08|C1BA08_RHOOB Tax_Id=632772 (holB)SubName: Full=DNA pol...   385   e-105
tr|C0ZNH0|C0ZNH0_RHOE4 Tax_Id=234621 (holB)SubName: Full=Putativ...   384   e-105
tr|C3JWH0|C3JWH0_RHOER Tax_Id=596309 SubName: Full=DNA polymeras...   384   e-105
tr|D0LEI8|D0LEI8_GORB4 Tax_Id=526226 SubName: Full=DNA polymeras...   372   e-101
tr|C2AJX9|C2AJX9_TSUPA Tax_Id=521096 SubName: Full=DNA polymeras...   349   4e-94
tr|C7MQK6|C7MQK6_SACVD Tax_Id=471857 SubName: Full=DNA polymeras...   328   7e-88
tr|A4F6Q3|A4F6Q3_SACEN Tax_Id=405948 (holB)SubName: Full=DNA pol...   327   2e-87
tr|C8X989|C8X989_NAKMY Tax_Id=479431 SubName: Full=DNA-directed ...   312   4e-83
tr|A4XBZ5|A4XBZ5_SALTO Tax_Id=369723 SubName: Full=DNA polymeras...   304   1e-80
tr|C6WFD1|C6WFD1_ACTMD Tax_Id=446462 SubName: Full=DNA-directed ...   304   2e-80
tr|A8M5W5|A8M5W5_SALAI Tax_Id=391037 SubName: Full=DNA polymeras...   301   7e-80
tr|C4LLH9|C4LLH9_CORK4 Tax_Id=645127 SubName: Full=DNA polymeras...   293   3e-77
tr|C0UA30|C0UA30_9ACTO Tax_Id=526225 SubName: Full=DNA polymeras...   289   4e-76
tr|C4DLA3|C4DLA3_9ACTO Tax_Id=446470 SubName: Full=DNA polymeras...   287   2e-75
tr|C7PWW6|C7PWW6_CATAD Tax_Id=479433 SubName: Full=DNA-directed ...   268   9e-70
tr|C1YIK8|C1YIK8_NOCDA Tax_Id=446468 SubName: Full=DNA polymeras...   266   5e-69
tr|Q8FSS1|Q8FSS1_COREF Tax_Id=152794 SubName: Full=DNA polymeras...   259   6e-67
tr|C8NKG7|C8NKG7_COREF Tax_Id=196164 (holB)SubName: Full=DNA pol...   259   6e-67
tr|C8RUZ9|C8RUZ9_CORJE Tax_Id=525262 (holB)SubName: Full=DNA pol...   258   7e-67
tr|B1VI07|B1VI07_CORU7 Tax_Id=504474 SubName: Full=DNA polymeras...   257   2e-66
tr|Q4JSS5|Q4JSS5_CORJK Tax_Id=306537 (holB)SubName: Full=DNA pol...   255   6e-66
tr|C9NA19|C9NA19_9ACTO Tax_Id=591167 SubName: Full=DNA polymeras...   252   7e-65
tr|B5G9L0|B5G9L0_9ACTO Tax_Id=465543 SubName: Full=DNA polymeras...   251   9e-65
tr|B4VDJ3|B4VDJ3_9ACTO Tax_Id=465541 SubName: Full=DNA polymeras...   251   1e-64
tr|B5HA97|B5HA97_STRPR Tax_Id=457429 SubName: Full=DNA polymeras...   250   2e-64
tr|A0LWD2|A0LWD2_ACIC1 Tax_Id=351607 SubName: Full=DNA polymeras...   250   3e-64

>tr|B2HJ77|B2HJ77_MYCMM Tax_Id=216594 SubName: Full=Conserved
           protein;[Mycobacterium marinum]
          Length = 405

 Score =  595 bits (1535), Expect = e-168
 Identities = 318/405 (78%), Positives = 319/405 (78%)

Query: 1   VSTVMSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIA 60
           +STVMSGVFARLVGQG                     GFDGDMTHAWLITGPPGSGRSIA
Sbjct: 1   MSTVMSGVFARLVGQGAVESELLAAARSARSDSTHSSGFDGDMTHAWLITGPPGSGRSIA 60

Query: 61  ALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRR 120
           ALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRR
Sbjct: 61  ALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRR 120

Query: 121 PTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRH 180
           PTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRH
Sbjct: 121 PTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRH 180

Query: 181 VALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLV 240
           VALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLV
Sbjct: 181 VALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLV 240

Query: 241 RDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSA 300
           RD                         TSD                         MRGSA
Sbjct: 241 RDAATPARAYAAAEELVAAAEAEALALTSDRAEAETEELRTALGAGGTGKGTAGTMRGSA 300

Query: 301 GAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAAL 360
           GAIKDLERRQKSRHT               TYFRDALLVSAKADQPRANHPDMADRVAAL
Sbjct: 301 GAIKDLERRQKSRHTRAARDALDRALIDLATYFRDALLVSAKADQPRANHPDMADRVAAL 360

Query: 361 AAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
           AAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ
Sbjct: 361 AAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405


>tr|A0PV82|A0PV82_MYCUA Tax_Id=362242 SubName: Full=Conserved
           protein;[Mycobacterium ulcerans]
          Length = 401

 Score =  588 bits (1517), Expect = e-166
 Identities = 314/401 (78%), Positives = 315/401 (78%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVFARLVGQG                     GFDGDMTHAWLITGPPGSGRSIAALCF
Sbjct: 1   MSGVFARLVGQGAVESELLAAARSARSDSTHSSGFDGDMTHAWLITGPPGSGRSIAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG
Sbjct: 61  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
           RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV
Sbjct: 121 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRD  
Sbjct: 181 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  TSD                         MRGSAGAIK
Sbjct: 241 TPARAYAAAEELVAAAEAEALALTSDRAEAETEELRTALGAGGTGKGTAGTMRGSAGAIK 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLERRQKSRHT               TYFRDALLVSAKADQPRANHPDMADRVAALAAHA
Sbjct: 301 DLERRQKSRHTRAARDALDRALIDLATYFRDALLVSAKADQPRANHPDMADRVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
           TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQL+
Sbjct: 361 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLR 401


>tr|C6DMU5|C6DMU5_MYCTK Tax_Id=478434 SubName: Full=DNA
           polymerase;[Mycobacterium tuberculosis]
          Length = 402

 Score =  502 bits (1293), Expect = e-140
 Identities = 269/402 (66%), Positives = 289/402 (71%)

Query: 4   VMSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALC 63
           +MSGVF RLVGQ                      G  G MTHAWL+TGPPGSGRS+AALC
Sbjct: 1   MMSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALC 60

Query: 64  FAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTT 123
           FAAALQCTS G+PGCGRCR+C TT+AGTHADVRRVIPEGLSIGVD+MRAIVQIA+RRPTT
Sbjct: 61  FAAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTT 120

Query: 124 GRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVAL 183
           G  QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIAVTLRSRCRHVAL
Sbjct: 121 GHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVAL 180

Query: 184 VTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDX 243
           VTP T AIAQVL D DGL  +TANWAASVSGGHVGRARRLATDP+ARQRRERALGL RD 
Sbjct: 181 VTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDA 240

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAI 303
                                   T+                          +RG+ GA+
Sbjct: 241 ATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAM 300

Query: 304 KDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAH 363
           KDLERRQKSR T               TYFRDALLV+A A   RANHPDMADRVAALAAH
Sbjct: 301 KDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAH 360

Query: 364 ATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
           A PERLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ+L+
Sbjct: 361 APPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 402


>tr|Q7D554|Q7D554_MYCTU Tax_Id=1773 (holB)SubName: Full=DNA
           polymerase III, delta' subunit;
           EC=2.7.7.7;[Mycobacterium tuberculosis]
          Length = 404

 Score =  502 bits (1293), Expect = e-140
 Identities = 269/402 (66%), Positives = 289/402 (71%)

Query: 4   VMSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALC 63
           +MSGVF RLVGQ                      G  G MTHAWL+TGPPGSGRS+AALC
Sbjct: 3   MMSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALC 62

Query: 64  FAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTT 123
           FAAALQCTS G+PGCGRCR+C TT+AGTHADVRRVIPEGLSIGVD+MRAIVQIA+RRPTT
Sbjct: 63  FAAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTT 122

Query: 124 GRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVAL 183
           G  QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIAVTLRSRCRHVAL
Sbjct: 123 GHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVAL 182

Query: 184 VTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDX 243
           VTP T AIAQVL D DGL  +TANWAASVSGGHVGRARRLATDP+ARQRRERALGL RD 
Sbjct: 183 VTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDA 242

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAI 303
                                   T+                          +RG+ GA+
Sbjct: 243 ATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAM 302

Query: 304 KDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAH 363
           KDLERRQKSR T               TYFRDALLV+A A   RANHPDMADRVAALAAH
Sbjct: 303 KDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAH 362

Query: 364 ATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
           A PERLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ+L+
Sbjct: 363 APPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 404


>tr|Q7TW17|Q7TW17_MYCBO Tax_Id=1765 SubName: Full=DNA POLYMERASE;
           EC=2.7.7.-;[Mycobacterium bovis]
          Length = 401

 Score =  502 bits (1292), Expect = e-140
 Identities = 269/401 (67%), Positives = 288/401 (71%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLVGQ                      G  G MTHAWL+TGPPGSGRS+AALCF
Sbjct: 1   MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTS G+PGCGRCR+C TT+AGTHADVRRVIPEGLSIGVD+MRAIVQIA+RRPTTG
Sbjct: 61  AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
             QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIAVTLRSRCRHVALV
Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP T AIAQVL D DGL  +TANWAASVSGGHVGRARRLATDP+ARQRRERALGL RD  
Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T+                          +RG+ GA+K
Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLERRQKSR T               TYFRDALLV+A A   RANHPDMADRVAALAAHA
Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            PERLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ+L+
Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401


>tr|O06363|O06363_MYCTU Tax_Id=1773 SubName: Full=POSSIBLE DNA
           POLYMERASE; EC=2.7.7.-;[Mycobacterium tuberculosis]
          Length = 401

 Score =  502 bits (1292), Expect = e-140
 Identities = 269/401 (67%), Positives = 288/401 (71%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLVGQ                      G  G MTHAWL+TGPPGSGRS+AALCF
Sbjct: 1   MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTS G+PGCGRCR+C TT+AGTHADVRRVIPEGLSIGVD+MRAIVQIA+RRPTTG
Sbjct: 61  AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
             QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIAVTLRSRCRHVALV
Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP T AIAQVL D DGL  +TANWAASVSGGHVGRARRLATDP+ARQRRERALGL RD  
Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T+                          +RG+ GA+K
Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLERRQKSR T               TYFRDALLV+A A   RANHPDMADRVAALAAHA
Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            PERLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ+L+
Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401


>tr|C1AI96|C1AI96_MYCBT Tax_Id=561275 SubName: Full=DNA polymerase
           III subunit delta; EC=2.7.7.7;[Mycobacterium bovis]
          Length = 401

 Score =  502 bits (1292), Expect = e-140
 Identities = 269/401 (67%), Positives = 288/401 (71%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLVGQ                      G  G MTHAWL+TGPPGSGRS+AALCF
Sbjct: 1   MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTS G+PGCGRCR+C TT+AGTHADVRRVIPEGLSIGVD+MRAIVQIA+RRPTTG
Sbjct: 61  AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
             QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIAVTLRSRCRHVALV
Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP T AIAQVL D DGL  +TANWAASVSGGHVGRARRLATDP+ARQRRERALGL RD  
Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T+                          +RG+ GA+K
Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLERRQKSR T               TYFRDALLV+A A   RANHPDMADRVAALAAHA
Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            PERLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ+L+
Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401


>tr|A5U8W8|A5U8W8_MYCTA Tax_Id=419947 SubName: Full=DNA polymerase
           III subunit delta;[Mycobacterium tuberculosis]
          Length = 401

 Score =  502 bits (1292), Expect = e-140
 Identities = 269/401 (67%), Positives = 288/401 (71%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLVGQ                      G  G MTHAWL+TGPPGSGRS+AALCF
Sbjct: 1   MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTS G+PGCGRCR+C TT+AGTHADVRRVIPEGLSIGVD+MRAIVQIA+RRPTTG
Sbjct: 61  AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
             QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIAVTLRSRCRHVALV
Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP T AIAQVL D DGL  +TANWAASVSGGHVGRARRLATDP+ARQRRERALGL RD  
Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T+                          +RG+ GA+K
Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLERRQKSR T               TYFRDALLV+A A   RANHPDMADRVAALAAHA
Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            PERLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ+L+
Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401


>tr|A1KPX3|A1KPX3_MYCBP Tax_Id=410289 SubName: Full=DNA polymerase;
           EC=2.7.7.-;[Mycobacterium bovis]
          Length = 401

 Score =  502 bits (1292), Expect = e-140
 Identities = 269/401 (67%), Positives = 288/401 (71%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLVGQ                      G  G MTHAWL+TGPPGSGRS+AALCF
Sbjct: 1   MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTS G+PGCGRCR+C TT+AGTHADVRRVIPEGLSIGVD+MRAIVQIA+RRPTTG
Sbjct: 61  AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
             QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIAVTLRSRCRHVALV
Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP T AIAQVL D DGL  +TANWAASVSGGHVGRARRLATDP+ARQRRERALGL RD  
Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T+                          +RG+ GA+K
Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLERRQKSR T               TYFRDALLV+A A   RANHPDMADRVAALAAHA
Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            PERLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ+L+
Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401


>tr|A5WTK9|A5WTK9_MYCTF Tax_Id=336982 SubName: Full=Hypothetical DNA
           polymerase;[Mycobacterium tuberculosis]
          Length = 401

 Score =  502 bits (1292), Expect = e-140
 Identities = 269/401 (67%), Positives = 288/401 (71%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLVGQ                      G  G MTHAWL+TGPPGSGRS+AALCF
Sbjct: 1   MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTS G+PGCGRCR+C TT+AGTHADVRRVIPEGLSIGVD+MRAIVQIA+RRPTTG
Sbjct: 61  AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
             QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIAVTLRSRCRHVALV
Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP T AIAQVL D DGL  +TANWAASVSGGHVGRARRLATDP+ARQRRERALGL RD  
Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T+                          +RG+ GA+K
Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLERRQKSR T               TYFRDALLV+A A   RANHPDMADRVAALAAHA
Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            PERLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ+L+
Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401


>tr|A4KMB6|A4KMB6_MYCTU Tax_Id=395095 SubName: Full=Hypothetical DNA
           polymerase;[Mycobacterium tuberculosis str. Haarlem]
          Length = 401

 Score =  500 bits (1288), Expect = e-139
 Identities = 268/401 (66%), Positives = 287/401 (71%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLVGQ                      G  G MTHAWL+TGPPGSGRS+AALCF
Sbjct: 1   MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTS G+PGCGRCR+C TT+AGTHADVRRVIPEGLSIGVD+MRAIVQIA+RRPTTG
Sbjct: 61  AAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
             QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIAVTLRSRCRHVALV
Sbjct: 121 HWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP T AIAQVL D DGL  +T NWAASVSGGHVGRARRLATDP+ARQRRERALGL RD  
Sbjct: 181 TPSTHAIAQVLSDGDGLDPDTGNWAASVSGGHVGRARRLATDPQARQRRERALGLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T+                          +RG+ GA+K
Sbjct: 241 TPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMK 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLERRQKSR T               TYFRDALLV+A A   RANHPDMADRVAALAAHA
Sbjct: 301 DLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            PERLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ+L+
Sbjct: 361 PPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR 401


>tr|Q744B4|Q744B4_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 401

 Score =  500 bits (1287), Expect = e-139
 Identities = 265/400 (66%), Positives = 288/400 (72%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLVGQ                         G MTHAWLITGPPGSGRS+AALCF
Sbjct: 1   MSGVFTRLVGQDAVKAELLGAARAARGDAGHSDAGAGTMTHAWLITGPPGSGRSVAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCT+DG+PGCGRC +C TT+AGTHADVRRV+PEGLSIGVD+MRAIVQIA+RRP TG
Sbjct: 61  AAALQCTADGEPGCGRCHACTTTLAGTHADVRRVVPEGLSIGVDEMRAIVQIAARRPATG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
             QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPED+A+TLRSRCRHVALV
Sbjct: 121 NWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDVAITLRSRCRHVALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP T AIA+VL+D+DGL  ETA+WAASVSGGHVGRARRLATDPEARQRRERALGLVRD  
Sbjct: 181 TPSTEAIARVLVDSDGLTPETADWAASVSGGHVGRARRLATDPEARQRRERALGLVRDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T++                         MRG+AGAIK
Sbjct: 241 TPSRAYAAAEELVAAAEAEAVVLTAERAEAETEELRTALGAGGTGKGTAGAMRGAAGAIK 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLER QKSR T               TYFRDAL+ S+ A   RANHPDMA+RVAALAAHA
Sbjct: 301 DLERCQKSRQTRASRDALDRALIDLATYFRDALMASSGAGAVRANHPDMAERVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQL 404
            PERLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQQL
Sbjct: 361 PPERLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQQL 400


>tr|A0QA63|A0QA63_MYCA1 Tax_Id=243243 SubName: Full=DNA polymerase
           III subunit delta;[Mycobacterium avium]
          Length = 388

 Score =  493 bits (1270), Expect = e-137
 Identities = 256/364 (70%), Positives = 278/364 (76%)

Query: 41  GDMTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIP 100
           G MTHAWLITGPPGSGRS+AALCFAAALQCT+DG+PGCGRC +C TT+AGTHADVRRV+P
Sbjct: 24  GTMTHAWLITGPPGSGRSVAALCFAAALQCTADGEPGCGRCHACTTTLAGTHADVRRVVP 83

Query: 101 EGLSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLL 160
           EGLSIGVD MRAIVQIA+RRP TG  QIV+IEDADRLTEGAANALLKVVEEPP STVFLL
Sbjct: 84  EGLSIGVDGMRAIVQIAARRPATGNWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLL 143

Query: 161 CAPSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRA 220
           CAPSVDPED+A+TLRSRCRHVALVTP T AIA+VL+D+DGL  ETA+WAASVSGGHVGRA
Sbjct: 144 CAPSVDPEDVAITLRSRCRHVALVTPSTEAIARVLVDSDGLTPETADWAASVSGGHVGRA 203

Query: 221 RRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXX 280
           RRLATDPEARQRRERALGLVRD                         T++          
Sbjct: 204 RRLATDPEARQRRERALGLVRDAATPSRAYAAAEELVAAAEAEAVVLTAERAEAETEELR 263

Query: 281 XXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVS 340
                          MRG+AGAIKDLERRQKSR T               TYFRDAL+ S
Sbjct: 264 TALGAGGTGKGTAGAMRGAAGAIKDLERRQKSRQTRASRDALDRALIDLATYFRDALMAS 323

Query: 341 AKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
           + A   RANHPDMA+RVAALAAHA PERLLRCIEAVL CREAL++NVKPKFAVDAMVA I
Sbjct: 324 SGAGAVRANHPDMAERVAALAAHAPPERLLRCIEAVLECREALAVNVKPKFAVDAMVATI 383

Query: 401 GQQL 404
           GQQL
Sbjct: 384 GQQL 387


>tr|A1TG65|A1TG65_MYCVP Tax_Id=350058 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Mycobacterium
           vanbaalenii]
          Length = 407

 Score =  486 bits (1252), Expect = e-135
 Identities = 260/406 (64%), Positives = 286/406 (70%), Gaps = 5/406 (1%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFD-----GDMTHAWLITGPPGSGRSI 59
           M+GVF+RLVGQ                      G D     G MTHAWLITGPPGSGRSI
Sbjct: 1   MTGVFSRLVGQDAVETELTAAARAARGDSPHTSGLDVSGVTGTMTHAWLITGPPGSGRSI 60

Query: 60  AALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASR 119
           AALCFAAALQCTSDG PGCG CR+C TTMAGTHADVRR+IPEGLSIGVD MRAIVQIASR
Sbjct: 61  AALCFAAALQCTSDGTPGCGECRACATTMAGTHADVRRIIPEGLSIGVDAMRAIVQIASR 120

Query: 120 RPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCR 179
           RP TGR QIV+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIA+TLRSRCR
Sbjct: 121 RPGTGRWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCR 180

Query: 180 HVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGL 239
           HVALVTPP  AIA+VLID+DGL  + A WAA+VSGGHVGRARRLATD  AR+RR+RALGL
Sbjct: 181 HVALVTPPVDAIARVLIDSDGLPEKDAEWAAAVSGGHVGRARRLATDERARERRQRALGL 240

Query: 240 VRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGS 299
            RD                         T D                         MRG+
Sbjct: 241 ARDAATPSRAYAAAEELVATAEAEAKALTEDRNEVEAEELRTALGAGGTGKGTAGTMRGA 300

Query: 300 AGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAA 359
           AGA+K+LE+RQKSRHT               TYFRDALLVS+ A    ANHPDMA++VAA
Sbjct: 301 AGALKELEKRQKSRHTRASRDALDRALIDLATYFRDALLVSSGATDVVANHPDMAEKVAA 360

Query: 360 LAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
           +AAHA+PE+LLRCIEAVL CREAL++NVKPKFAVDAMV  +GQ L+
Sbjct: 361 MAAHASPEKLLRCIEAVLECREALAVNVKPKFAVDAMVGTVGQALR 406


>tr|O69546|O69546_MYCLE Tax_Id=1769 (MLCB2548.29c)SubName:
           Full=Putative uncharacterized protein ML0202; SubName:
           Full=Putative uncharacterized protein
           MLCB2548.29c;[Mycobacterium leprae]
          Length = 405

 Score =  484 bits (1245), Expect = e-134
 Identities = 262/404 (64%), Positives = 284/404 (70%), Gaps = 3/404 (0%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLVGQ                        DG MTHAWLITGPPGSGRS+AA+CF
Sbjct: 1   MSGVFTRLVGQDAVEAELLAAAKAARSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60

Query: 65  AAALQCTSD---GDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRP 121
           AAALQCT+D   G PGCGRCR+C TTMAGTHADVRRVIP+GLSIGVD+MRAIV  ASRRP
Sbjct: 61  AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120

Query: 122 TTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHV 181
           +TG  QIVLIEDADRLTEGAANALLKVVEEPP+STVFLLCAPSV PEDIAVTLRSRCRHV
Sbjct: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180

Query: 182 ALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVR 241
           ALVTP   AIA+VLID+DGLAA+TANWAA VSGGHVG ARRLATDPEA+QRRERA GL+R
Sbjct: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240

Query: 242 DXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAG 301
           D                         T++                         +R   G
Sbjct: 241 DAVVPSRAYAVAEELVAAAEAEALVLTAERAEAETEELRTALGAGGTGKGTAGALRSVTG 300

Query: 302 AIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALA 361
           AIKDLERRQKSR T               TYFRDALLVSA A   + NHPDMADRVA LA
Sbjct: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360

Query: 362 AHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            HATPERLLRCIEAVL CREAL++NVKPKFAVDA+VA IGQ+L+
Sbjct: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404


>tr|B8ZU29|B8ZU29_MYCLB Tax_Id=561304 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium leprae]
          Length = 405

 Score =  484 bits (1245), Expect = e-134
 Identities = 262/404 (64%), Positives = 284/404 (70%), Gaps = 3/404 (0%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLVGQ                        DG MTHAWLITGPPGSGRS+AA+CF
Sbjct: 1   MSGVFTRLVGQDAVEAELLAAAKAARSDLVHSRPADGTMTHAWLITGPPGSGRSVAAVCF 60

Query: 65  AAALQCTSD---GDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRP 121
           AAALQCT+D   G PGCGRCR+C TTMAGTHADVRRVIP+GLSIGVD+MRAIV  ASRRP
Sbjct: 61  AAALQCTADFQDGGPGCGRCRACTTTMAGTHADVRRVIPDGLSIGVDEMRAIVHEASRRP 120

Query: 122 TTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHV 181
           +TG  QIVLIEDADRLTEGAANALLKVVEEPP+STVFLLCAPSV PEDIAVTLRSRCRHV
Sbjct: 121 STGYWQIVLIEDADRLTEGAANALLKVVEEPPSSTVFLLCAPSVAPEDIAVTLRSRCRHV 180

Query: 182 ALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVR 241
           ALVTP   AIA+VLID+DGLAA+TANWAA VSGGHVG ARRLATDPEA+QRRERA GL+R
Sbjct: 181 ALVTPSHAAIARVLIDSDGLAADTANWAALVSGGHVGLARRLATDPEAQQRRERAFGLIR 240

Query: 242 DXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAG 301
           D                         T++                         +R   G
Sbjct: 241 DAVVPSRAYAVAEELVAAAEAEALVLTAERAEAETEELRTALGAGGTGKGTAGALRSVTG 300

Query: 302 AIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALA 361
           AIKDLERRQKSR T               TYFRDALLVSA A   + NHPDMADRVA LA
Sbjct: 301 AIKDLERRQKSRQTRASRDALDRVLIDLATYFRDALLVSANAGSVQPNHPDMADRVAVLA 360

Query: 362 AHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            HATPERLLRCIEAVL CREAL++NVKPKFAVDA+VA IGQ+L+
Sbjct: 361 CHATPERLLRCIEAVLECREALAVNVKPKFAVDALVATIGQELR 404


>tr|A4T5R0|A4T5R0_MYCGI Tax_Id=350054 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Mycobacterium
           gilvum]
          Length = 404

 Score =  483 bits (1242), Expect = e-134
 Identities = 261/403 (64%), Positives = 283/403 (70%), Gaps = 2/403 (0%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXX--GFDGDMTHAWLITGPPGSGRSIAAL 62
           M+GVF+RLVGQ                           G MTHAWLITGPPGSGRSIAAL
Sbjct: 1   MAGVFSRLVGQDTVEAELIAAARAARGDSVHDDDPAETGTMTHAWLITGPPGSGRSIAAL 60

Query: 63  CFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPT 122
           CFAAALQCTS+G PGCG CR+C TTMAGTHADVRR+IPEGLSIGVD MRAIVQIASRRP 
Sbjct: 61  CFAAALQCTSEGRPGCGECRACTTTMAGTHADVRRIIPEGLSIGVDAMRAIVQIASRRPG 120

Query: 123 TGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVA 182
           TGR QIV++EDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIA+TLRSRCRHVA
Sbjct: 121 TGRWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHVA 180

Query: 183 LVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRD 242
           LVTPP  AIAQVLID DGL+A  A WAASVSGGHVGRARRLATD EAR+RR+RALGL RD
Sbjct: 181 LVTPPVEAIAQVLIDADGLSAAEARWAASVSGGHVGRARRLATDDEARERRKRALGLARD 240

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGA 302
                                    T D                         MRG+AGA
Sbjct: 241 AATPSRAYAAAEELVATAEAEAKALTGDRNEAESEELRTALGAGGTGKGTAGTMRGAAGA 300

Query: 303 IKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAA 362
           +K+LE+RQKSR T               TYFRDALLVSA A    ANHPDMAD+VAALAA
Sbjct: 301 LKELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSAGATDVVANHPDMADKVAALAA 360

Query: 363 HATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
           HA P++LLRCIEAVL CREAL++NVKPKFAVDAMV  +GQ L+
Sbjct: 361 HAPPDKLLRCIEAVLECREALAVNVKPKFAVDAMVGTVGQALR 403


>tr|A0R5D5|A0R5D5_MYCS2 Tax_Id=246196 SubName: Full=DNA polymerase
           III subunit delta;[Mycobacterium smegmatis]
          Length = 402

 Score =  476 bits (1226), Expect = e-132
 Identities = 254/401 (63%), Positives = 279/401 (69%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF+RLVGQ                         G MTHAWLITGPPGSGRS+AALCF
Sbjct: 1   MSGVFSRLVGQHAVEQELVAAAAAARGDSAHSGVATGTMTHAWLITGPPGSGRSVAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTSDG PGCG CR+C TTMAGTHADVRR++PEGLSI V +MR IVQIASRRP TG
Sbjct: 61  AAALQCTSDGVPGCGECRACTTTMAGTHADVRRIVPEGLSIAVKEMREIVQIASRRPGTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
           R Q+V+IEDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIA+TLRSRCRH+AL 
Sbjct: 121 RWQVVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALT 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP   AIA VLI  DGL  E A WAASV GGHVGRARRLATDPEAR+RR+RALGL RD  
Sbjct: 181 TPSIDAIADVLITGDGLPPEDARWAASVCGGHVGRARRLATDPEARERRKRALGLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T+D                         MRG+AGA+K
Sbjct: 241 TPSRAYAAAEEMVAVAEAEAVALTADRNENETEELKTALGAGGTGKGTAGTMRGAAGALK 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           +LE+RQKSR T               TYFRDALLVS+ A+   ANHPDMA++VAALAAHA
Sbjct: 301 ELEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGANTVTANHPDMAEKVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            P+RLLRCIEAVL CREAL++NVKPKFAVDAMVA IGQ L+
Sbjct: 361 APDRLLRCIEAVLECREALAVNVKPKFAVDAMVATIGQALR 401


>tr|Q1B2I6|Q1B2I6_MYCSS Tax_Id=164756 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Mycobacterium sp.]
          Length = 402

 Score =  473 bits (1217), Expect = e-131
 Identities = 250/401 (62%), Positives = 279/401 (69%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           M+GVF+RLVGQ                         G MTHAWLITGPPGSGRSIAALCF
Sbjct: 1   MAGVFSRLVGQHAVEAELVGAAQAARGDAAHSASATGTMTHAWLITGPPGSGRSIAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTS+G PGCG CR+C TTMAGTHADVRR+IPEGLSIGVD+MR+IVQIASRRP TG
Sbjct: 61  AAALQCTSEGVPGCGECRACTTTMAGTHADVRRIIPEGLSIGVDEMRSIVQIASRRPGTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
           R QIV++EDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIA+TLRSRCRH+ALV
Sbjct: 121 RWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP   AI QVLI+ DG++ + A WAASVSGGHVGRARRL  D +AR RR+RAL L RD  
Sbjct: 181 TPSVDAITQVLIEGDGMSEQEARWAASVSGGHVGRARRLVVDEQARDRRKRALSLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T D                         MRG+ GAI+
Sbjct: 241 TPSRAYAAAEELVASAEAEAKALTVDRNETEAEELRTALGAGGTGKGTAGTMRGATGAIR 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLE+RQKSR T               TYFRDALLVS+ A   +ANHPDMA++VAALAAHA
Sbjct: 301 DLEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGAGHVQANHPDMAEKVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            PE+LLRCIEAVL CREAL++NVKPKFAVDAMVA +GQ L+
Sbjct: 361 PPEKLLRCIEAVLECREALAVNVKPKFAVDAMVATVGQALR 401


>tr|A1UML2|A1UML2_MYCSK Tax_Id=189918 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Mycobacterium sp.]
          Length = 402

 Score =  473 bits (1217), Expect = e-131
 Identities = 250/401 (62%), Positives = 279/401 (69%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           M+GVF+RLVGQ                         G MTHAWLITGPPGSGRSIAALCF
Sbjct: 1   MAGVFSRLVGQHAVEAELVGAAQAARGDAAHSASATGTMTHAWLITGPPGSGRSIAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTS+G PGCG CR+C TTMAGTHADVRR+IPEGLSIGVD+MR+IVQIASRRP TG
Sbjct: 61  AAALQCTSEGVPGCGECRACTTTMAGTHADVRRIIPEGLSIGVDEMRSIVQIASRRPGTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
           R QIV++EDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIA+TLRSRCRH+ALV
Sbjct: 121 RWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHIALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP   AI QVLI+ DG++ + A WAASVSGGHVGRARRL  D +AR RR+RAL L RD  
Sbjct: 181 TPSVDAITQVLIEGDGMSEQEARWAASVSGGHVGRARRLVVDEQARDRRKRALSLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T D                         MRG+ GAI+
Sbjct: 241 TPSRAYAAAEELVASAEAEAKALTVDRNETEAEELRTALGAGGTGKGTAGTMRGATGAIR 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLE+RQKSR T               TYFRDALLVS+ A   +ANHPDMA++VAALAAHA
Sbjct: 301 DLEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGAGHVQANHPDMAEKVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            PE+LLRCIEAVL CREAL++NVKPKFAVDAMVA +GQ L+
Sbjct: 361 PPEKLLRCIEAVLECREALAVNVKPKFAVDAMVATVGQALR 401


>tr|A3Q717|A3Q717_MYCSJ Tax_Id=164757 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Mycobacterium sp.]
          Length = 402

 Score =  473 bits (1216), Expect = e-131
 Identities = 251/401 (62%), Positives = 279/401 (69%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           M+GVF+RLVGQ                         G MTHAWLITGPPGSGRSIAALCF
Sbjct: 1   MAGVFSRLVGQHAVEAELVGAAQAARGDAAHSASATGTMTHAWLITGPPGSGRSIAALCF 60

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCTS+G PGCG CR+C TTMAGTHADVRR+IPEGLSIGVD+MR+IVQIASRRP TG
Sbjct: 61  AAALQCTSEGVPGCGDCRACTTTMAGTHADVRRIIPEGLSIGVDEMRSIVQIASRRPGTG 120

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
           R QIV++EDADRLTEGAANALLKVVEEPP STVFLLCAPSVDPEDIA+TLRSRCRHVALV
Sbjct: 121 RWQIVVVEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAITLRSRCRHVALV 180

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP   AI QVLI+ DG++ + A WAASVSGGHVGRARRL  D +AR RR+RAL L RD  
Sbjct: 181 TPSVDAITQVLIEGDGMSEQEARWAASVSGGHVGRARRLVVDEQARDRRKRALSLARDAA 240

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T D                         MRG+ GAI+
Sbjct: 241 TPSRAYAAAEELVASAEAEAKALTVDRNETEAEELRTALGAGGTGKGTAGTMRGATGAIR 300

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHA 364
           DLE+RQKSR T               TYFRDALLVS+ A   +ANHPDMA++VAALAAHA
Sbjct: 301 DLEKRQKSRQTRASRDALDRALIDLATYFRDALLVSSGAGHVQANHPDMAEKVAALAAHA 360

Query: 365 TPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
            PE+LLRCIEAVL CREAL++NVKPKFAVDAMVA +GQ L+
Sbjct: 361 PPEKLLRCIEAVLECREALAVNVKPKFAVDAMVATVGQALR 401


>tr|B1MGQ6|B1MGQ6_MYCA9 Tax_Id=561007 SubName: Full=Probable DNA
           polymerase III, delta' subunit;[Mycobacterium abscessus]
          Length = 401

 Score =  426 bits (1094), Expect = e-117
 Identities = 234/404 (57%), Positives = 263/404 (65%), Gaps = 9/404 (2%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           MSGVF RLV QG                        G MTHAWL TGPPGSGRS+AALCF
Sbjct: 1   MSGVFGRLVDQGAVVSTLSSSALAARGDDA------GRMTHAWLFTGPPGSGRSVAALCF 54

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQC S+   GCG CR C TTMAGTHADVRRV+PEGLSIGVD+MRAIVQ A RRP+TG
Sbjct: 55  AAALQCESEDVAGCGACRPCTTTMAGTHADVRRVVPEGLSIGVDEMRAIVQAAWRRPSTG 114

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
           R  +VLIEDADRLTEGA N LLKVVEEPP  TVFLLCAPSVDPEDI++TLRSRCRHVALV
Sbjct: 115 RWLVVLIEDADRLTEGAGNVLLKVVEEPPPRTVFLLCAPSVDPEDISITLRSRCRHVALV 174

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP   AIAQVL+D DG+ AE A WAASVSGGHVGRARRLATD +AR RR +ALGL R+  
Sbjct: 175 TPSVAAIAQVLVDRDGIDAEQAQWAASVSGGHVGRARRLATDEQARARRLKALGLAREAA 234

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  T+                          +RGSAG +K
Sbjct: 235 TPSRAYAAAEELVTSADAEAKELTAARNEAEEEELKTALGAGGTGKGAATALRGSAGVLK 294

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVS-AKADQPRA--NHPDMADRVAALA 361
           DLER+QKSR T               TYFRDAL++S   A Q R   +HPDMADR+  + 
Sbjct: 295 DLERKQKSRQTRASRDALDRTLIDLATYFRDALVLSFGAAGQGRVALHHPDMADRLGPMV 354

Query: 362 AHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQQLQ 405
               PE+LL+CIEAVL CREAL++NVKPKFA+DA+VA  GQ L+
Sbjct: 355 DRVPPEQLLKCIEAVLECREALAVNVKPKFAIDALVATAGQALR 398


>tr|Q5Z2Y1|Q5Z2Y1_NOCFA Tax_Id=37329 SubName: Full=Putative DNA
           polymerase III delta' subunit;[Nocardia farcinica]
          Length = 410

 Score =  389 bits (998), Expect = e-106
 Identities = 217/399 (54%), Positives = 247/399 (61%), Gaps = 8/399 (2%)

Query: 5   MSGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCF 64
           ++GVF RLVGQ                        +G MTH+WL TGPPGSGRS+AALCF
Sbjct: 11  VAGVFDRLVGQDAVESELTAAAVAARAG-----SVEGAMTHSWLFTGPPGSGRSVAALCF 65

Query: 65  AAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTG 124
           AAALQCT  G PGCGRC +C TTMAGTH DVRRV+PEGLSI   +MR IVQIASRRP+TG
Sbjct: 66  AAALQCTDPGTPGCGRCHACTTTMAGTHGDVRRVVPEGLSISTKEMREIVQIASRRPSTG 125

Query: 125 RHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALV 184
           R Q+V+IEDADRLTE A N LLKVVEEPP  TVFLLCAPSVDPEDI+VTLRSRCRHV LV
Sbjct: 126 RWQVVVIEDADRLTEAAGNVLLKVVEEPPERTVFLLCAPSVDPEDISVTLRSRCRHVHLV 185

Query: 185 TPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXX 244
           TP   AIA VL + DGL A+TA WAASVSGGHVGRARRLATD  AR+RR+RAL L     
Sbjct: 186 TPSVAAIATVLRERDGLDAKTAEWAASVSGGHVGRARRLATDAHARERRQRALALAAAAA 245

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIK 304
                                  +++                          RGSAG +K
Sbjct: 246 RPGAAYAAADELVKAADDEAKEMSAERDEREREELATALGAGGTGKGAASATRGSAGVLK 305

Query: 305 DLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLV---SAKADQPRANHPDMADRVAALA 361
           +LERRQKSR T                 +RDAL V   +  AD     HPDM +++  LA
Sbjct: 306 ELERRQKSRATRTGRDALDRALIDVAGLYRDALAVRFAAHDADAVTLTHPDMTEQIHDLA 365

Query: 362 AHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
               PE LLR I+AVL CREAL +NVKP+FAV AMVA +
Sbjct: 366 DRVPPEGLLRSIDAVLACREALDLNVKPRFAVAAMVATL 404


>tr|Q0S8J2|Q0S8J2_RHOSR Tax_Id=101510 SubName: Full=Probable
           DNA-directed DNA polymerase III delta prime subunit;
           EC=2.7.7.7;[Rhodococcus sp.]
          Length = 404

 Score =  387 bits (995), Expect = e-105
 Identities = 209/359 (58%), Positives = 243/359 (67%), Gaps = 1/359 (0%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTH+WL TGPPGSGRS+AA CFAAALQCTSDG PGCG C +C T MAGTH DVR+V+PEG
Sbjct: 35  MTHSWLFTGPPGSGRSVAAQCFAAALQCTSDGVPGCGVCHACTTAMAGTHGDVRQVVPEG 94

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           LSI V +MRAIVQ A+RRP+TGR QIV++EDADRLTEGAANALLKVVEEPP  TVFLLCA
Sbjct: 95  LSISVKEMRAIVQTAARRPSTGRWQIVVVEDADRLTEGAANALLKVVEEPPDRTVFLLCA 154

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           PSVDP+DI+VTLRSRCRHV LVTP   +IA+VL + DGL    A  AAS+SGGHVGRARR
Sbjct: 155 PSVDPQDISVTLRSRCRHVHLVTPSADSIAKVLRERDGLDPADAQLAASISGGHVGRARR 214

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LATD  A+ RR+ AL L                            ++             
Sbjct: 215 LATDLNAKVRRKDALDLAVAALRPATAFAAAEELVRSADAEAKEMSASRDEQETEELRTA 274

Query: 283 XXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAK 342
                        +RGSAG +KDLE+RQKSR T                 +RDAL V+ K
Sbjct: 275 LGAGGTGKGAAGALRGSAGVLKDLEKRQKSRATRTGRDALDRALIDLAGLYRDALAVAWK 334

Query: 343 ADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIG 401
           ++   ANHPDMADR A LA+  TPE LLRCIEAVL CREA+++NVKP++AVDAMVA +G
Sbjct: 335 SN-AAANHPDMADRAADLASRTTPEGLLRCIEAVLECREAITVNVKPQWAVDAMVATLG 392


>tr|C1BA08|C1BA08_RHOOB Tax_Id=632772 (holB)SubName: Full=DNA
           polymerase III delta' subunit; EC=2.7.7.7;[Rhodococcus
           opacus]
          Length = 404

 Score =  385 bits (988), Expect = e-105
 Identities = 206/359 (57%), Positives = 243/359 (67%), Gaps = 1/359 (0%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTH+WL TGPPGSGRS+AA CFAAALQCTS+G PGCG C +C T MAGTH DVR+V+PEG
Sbjct: 35  MTHSWLFTGPPGSGRSVAAQCFAAALQCTSEGTPGCGVCHACTTAMAGTHGDVRQVVPEG 94

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           LSI V +MRA VQ A+RRP+TGR QIV++EDADRLTEGAANALLKVVEEPP  TVFLLCA
Sbjct: 95  LSISVKEMRATVQTAARRPSTGRWQIVVVEDADRLTEGAANALLKVVEEPPDRTVFLLCA 154

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           PSVDP+DI+VTLRSRCRH+ LVTP   +IA+VL + DGL  E A  AAS+SGGHVGRARR
Sbjct: 155 PSVDPQDISVTLRSRCRHIHLVTPSADSIAKVLRERDGLDPEAAQLAASISGGHVGRARR 214

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LATD  A+ RR+ AL L                            ++             
Sbjct: 215 LATDLNAKVRRKDALDLAVAALRPATAFAAAEELVRSADAEAKEMSAARDEQETEELRTA 274

Query: 283 XXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAK 342
                        +RGSAG +KDLE+RQKSR T                 +RDAL V+ K
Sbjct: 275 LGAGGTGKGAAGALRGSAGVLKDLEKRQKSRATRTGRDALDRALIDLAGLYRDALAVAWK 334

Query: 343 ADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIG 401
           +    ANHPDMADR A LA+  TPE LL+CIEAVL CREA+++NVKP++AVDAMVA++G
Sbjct: 335 S-TAAANHPDMADRAADLASRTTPEGLLKCIEAVLECREAIAVNVKPQWAVDAMVASLG 392


>tr|C0ZNH0|C0ZNH0_RHOE4 Tax_Id=234621 (holB)SubName: Full=Putative
           DNA polymerase III delta' subunit;
           EC=2.7.7.7;[Rhodococcus erythropolis]
          Length = 409

 Score =  384 bits (987), Expect = e-105
 Identities = 214/395 (54%), Positives = 243/395 (61%), Gaps = 6/395 (1%)

Query: 7   GVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCFAA 66
           GVF RLVGQ                          +MTHAWL TGPPGSGRS+AALCFAA
Sbjct: 9   GVFGRLVGQ-----HDVEQSLRDAALSARGDSSGSEMTHAWLFTGPPGSGRSVAALCFAA 63

Query: 67  ALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTGRH 126
           ALQCTSDG PGCG C +C TTM GTH DVRR+IP+GLSI V  MR IV IASRRPTTGR 
Sbjct: 64  ALQCTSDGAPGCGECHACTTTMGGTHGDVRRIIPDGLSISVKGMREIVNIASRRPTTGRW 123

Query: 127 QIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALVTP 186
           Q++++EDADRLTEGAANALLKVVEEPP  TV LLCAP+ DPED++VTLRSRCRH+ LVTP
Sbjct: 124 QVIVVEDADRLTEGAANALLKVVEEPPDRTVILLCAPTTDPEDMSVTLRSRCRHMPLVTP 183

Query: 187 PTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXXXX 246
              +IAQVLID DGL  E A  AAS+SGGHVGRARRLATD  AR  R+R+L L  D    
Sbjct: 184 SVESIAQVLIDRDGLDPERARIAASISGGHVGRARRLATDESARDERQRSLRLAADAIGA 243

Query: 247 XXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIKDL 306
                                 ++                         +RGSAG IKDL
Sbjct: 244 STAYKAAENLVKSIEADTKAFYAELKEQELEELKVSLGGGGTGKGTAGTLRGSAGLIKDL 303

Query: 307 ERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHATP 366
           E RQKSR T                 +RDAL  S       A HPDMA + A LAA  +P
Sbjct: 304 EARQKSRDTRARRDLLDRTLIDLAGMYRDALSYSL-GSTSTATHPDMARQAAELAARTSP 362

Query: 367 ERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIG 401
           E LL+CIEAVL CREA+  NVK ++A+DAMVA+IG
Sbjct: 363 EGLLKCIEAVLECREAVDFNVKLQWALDAMVASIG 397


>tr|C3JWH0|C3JWH0_RHOER Tax_Id=596309 SubName: Full=DNA polymerase
           III subunit delta;[Rhodococcus erythropolis SK121]
          Length = 405

 Score =  384 bits (987), Expect = e-105
 Identities = 214/395 (54%), Positives = 243/395 (61%), Gaps = 6/395 (1%)

Query: 7   GVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCFAA 66
           GVF RLVGQ                          +MTHAWL TGPPGSGRS+AALCFAA
Sbjct: 5   GVFGRLVGQ-----HDVEQSLRDAALSARGDSSGSEMTHAWLFTGPPGSGRSVAALCFAA 59

Query: 67  ALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTGRH 126
           ALQCTSDG PGCG C +C TTM GTH DVRR+IP+GLSI V  MR IV IASRRPTTGR 
Sbjct: 60  ALQCTSDGAPGCGECHACTTTMGGTHGDVRRIIPDGLSISVKGMREIVNIASRRPTTGRW 119

Query: 127 QIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALVTP 186
           Q++++EDADRLTEGAANALLKVVEEPP  TV LLCAP+ DPED++VTLRSRCRH+ LVTP
Sbjct: 120 QVIVVEDADRLTEGAANALLKVVEEPPDRTVILLCAPTTDPEDMSVTLRSRCRHMPLVTP 179

Query: 187 PTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXXXX 246
              +IAQVLID DGL  E A  AAS+SGGHVGRARRLATD  AR  R+R+L L  D    
Sbjct: 180 SVESIAQVLIDRDGLDPERARIAASISGGHVGRARRLATDESARDERQRSLRLAADAIGA 239

Query: 247 XXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIKDL 306
                                 ++                         +RGSAG IKDL
Sbjct: 240 STAYKAAENLVKSIEADTKAFYAELKEQELEELKVSLGGGGTGKGTAGTLRGSAGLIKDL 299

Query: 307 ERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHATP 366
           E RQKSR T                 +RDAL  S       A HPDMA + A LAA  +P
Sbjct: 300 EARQKSRDTRARRDLLDRTLIDLAGMYRDALSCSL-GSTSTATHPDMARQAAELAARTSP 358

Query: 367 ERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIG 401
           E LL+CIEAVL CREA+  NVK ++A+DAMVA+IG
Sbjct: 359 EGLLKCIEAVLECREAVDFNVKLQWALDAMVASIG 393


>tr|D0LEI8|D0LEI8_GORB4 Tax_Id=526226 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Gordonia
           bronchialis]
          Length = 431

 Score =  372 bits (955), Expect = e-101
 Identities = 203/362 (56%), Positives = 237/362 (65%), Gaps = 4/362 (1%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSD--GDPGCGRCRSCLTTMAGTHADVRRVIP 100
           MTH+WL TGPPGSGRS+AA CFAAALQC +D   D GCG+CR+C+T MAGTHADVR + P
Sbjct: 62  MTHSWLFTGPPGSGRSVAATCFAAALQCQADDPADIGCGQCRACVTVMAGTHADVRSIAP 121

Query: 101 EGLSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLL 160
           +GL++ V  MR IVQ ASRRP TGR QIV++EDADRLTE AANALLKVVEEPP+ TVFLL
Sbjct: 122 DGLTLSVKSMREIVQTASRRPGTGRWQIVIVEDADRLTEQAANALLKVVEEPPSRTVFLL 181

Query: 161 CAPSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRA 220
           CAPSVDP+DI+VTLRSRCRHVAL +P    I +VL+D DG+    A WAASV GGH+GRA
Sbjct: 182 CAPSVDPDDISVTLRSRCRHVALTSPSVADIERVLVDRDGIDPAQAAWAASVCGGHIGRA 241

Query: 221 RRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXX 280
           RRLATD +AR++RE AL L R                           ++          
Sbjct: 242 RRLATDADAREQREMALRLARAATVDSTAYKAAEELVRTAEAASKAIAAELNEPELEEMK 301

Query: 281 XXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVS 340
                           RGSAGAIK+LE+RQKSR T                 FRDAL+V 
Sbjct: 302 TALGAGGTGKGTARAPRGSAGAIKELEKRQKSRETRVGRDVLDRALVDLAALFRDALVVG 361

Query: 341 AKADQPRANHPDMADRVA-ALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAA 399
             A Q    HPD AD V   +A  A PE+LL+C+EAVL CREAL +NVKPKFAVDAMVA+
Sbjct: 362 VGA-QVTPMHPDKADDVVIPMAGFARPEQLLQCVEAVLACREALDVNVKPKFAVDAMVAS 420

Query: 400 IG 401
           IG
Sbjct: 421 IG 422


>tr|C2AJX9|C2AJX9_TSUPA Tax_Id=521096 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Tsukamurella
           paurometabola DSM 20162]
          Length = 403

 Score =  349 bits (895), Expect = 4e-94
 Identities = 189/363 (52%), Positives = 227/363 (62%), Gaps = 3/363 (0%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTHAWL TGPPGSGRS+AA   AAALQC    +PGCG CR+C T +AGTHADVR + P+G
Sbjct: 40  MTHAWLFTGPPGSGRSVAARALAAALQCEDPAEPGCGHCRACTTVLAGTHADVRAIAPDG 99

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           LSI V  MR +V  ASRRP+ G  QIVLIEDADRLTE A NALLK+VEEPPA T+ LLCA
Sbjct: 100 LSIAVKQMREVVADASRRPSVGHWQIVLIEDADRLTEQAGNALLKMVEEPPAQTIVLLCA 159

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           P+VDPEDI+VTL+SRCRHV LVTP   AIA VL + DG+ AE A WAA V GGHVGRA+R
Sbjct: 160 PTVDPEDISVTLKSRCRHVPLVTPSAPAIAAVL-ERDGIDAERAAWAAGVCGGHVGRAKR 218

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LATDPE++++R +AL + R                           +D            
Sbjct: 219 LATDPESQKQRRQALSVAR-AATSEGVYGVVEQLLRDAESAAKEINADLNERETEELKTA 277

Query: 283 XXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAK 342
                        MRGSAG +KDLE+RQK+R T                 FRDA LV   
Sbjct: 278 LGAGGTGRGTAGVMRGSAGQLKDLEKRQKARSTRSVRDALDRALIDLAALFRDA-LVQGS 336

Query: 343 ADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAIGQ 402
             Q    HPD A++ + LA +A PE LLRC+E+VL+CREA+ +NVKP  A+DAM A +  
Sbjct: 337 GAQVTLMHPDEAEQTSRLAGYARPEGLLRCVESVLDCREAIDLNVKPVVALDAMAAGVSS 396

Query: 403 QLQ 405
            L+
Sbjct: 397 ALR 399


>tr|C7MQK6|C7MQK6_SACVD Tax_Id=471857 SubName: Full=DNA polymerase
           III, delta prime subunit;[Saccharomonospora viridis]
          Length = 406

 Score =  328 bits (841), Expect = 7e-88
 Identities = 181/360 (50%), Positives = 222/360 (61%), Gaps = 3/360 (0%)

Query: 41  GDMTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIP 100
           G MTHAWL TGPPGSGRS+AA  FAAALQCT D   GCGRC+ C TT+AGTHADV+ V+P
Sbjct: 47  GSMTHAWLFTGPPGSGRSVAARTFAAALQCTVDA--GCGRCQGCHTTLAGTHADVKLVVP 104

Query: 101 EGLSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLL 160
           EGLSI V +MRA+VQ A+RRPTTGR QIV+IEDADRLTEGA+NALLK VEEPP  TVFLL
Sbjct: 105 EGLSISVSEMRALVQAAARRPTTGRWQIVIIEDADRLTEGASNALLKAVEEPPERTVFLL 164

Query: 161 CAPSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRA 220
           CAPS  P+DI++T+RSRCR V L TP   AIA VL++ DG+  E A WAASV GGHVGRA
Sbjct: 165 CAPSDHPDDISITIRSRCRTVNLRTPSPEAIATVLVERDGIDPERARWAASVCGGHVGRA 224

Query: 221 RRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXX 280
           RRLATD  AR RR   L +                            +            
Sbjct: 225 RRLATDENARARRAAVLRIPLGLRRAEDVFRCADELISTAEADATEVSKARDEAEQDALR 284

Query: 281 XXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVS 340
                           R +  A++ LE++QKSR T                ++RD L++S
Sbjct: 285 TAMGSGGTGKGVAAAKRAADAAVRALEKKQKSRATRTQRDTLDLALMDLAGFYRDVLVLS 344

Query: 341 AKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
           + +D    NHPD+A++ A  A   TP   LR +EAVL CR+A++ NVKP+ AV+AM+  +
Sbjct: 345 SGSD-AALNHPDVAEQAAEAAREWTPVSTLRRLEAVLACRDAIAWNVKPRVAVEAMLTTL 403


>tr|A4F6Q3|A4F6Q3_SACEN Tax_Id=405948 (holB)SubName: Full=DNA
           polymerase III, delta' subunit;
           EC=2.7.7.7;[Saccharopolyspora erythraea]
          Length = 403

 Score =  327 bits (838), Expect = 2e-87
 Identities = 190/395 (48%), Positives = 228/395 (57%), Gaps = 3/395 (0%)

Query: 6   SGVFARLVGQGXXXXXXXXXXXXXXXXXXXXXGFDGDMTHAWLITGPPGSGRSIAALCFA 65
           +GV+A +VGQ                         G MTHAWL TGPPGSGRS+AA  FA
Sbjct: 9   TGVWADVVGQPEAVRTLRAAVRAADLLARGEPAPAGAMTHAWLFTGPPGSGRSVAARSFA 68

Query: 66  AALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEGLSIGVDDMRAIVQIASRRPTTGR 125
           AALQCTS    GCG C +C T  AGTHADVR V+PEGLSI V +MR++VQ ++RRPTTG+
Sbjct: 69  AALQCTSG--EGCGHCSACRTVQAGTHADVRVVVPEGLSISVSEMRSLVQASARRPTTGQ 126

Query: 126 HQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCAPSVDPEDIAVTLRSRCRHVALVT 185
            ++VLIED+DRLTEGA+NALLK VEEPP  TVFLLCAPS  PED++VT+RSRCR V L T
Sbjct: 127 WRVVLIEDSDRLTEGASNALLKAVEEPPDRTVFLLCAPSDHPEDVSVTIRSRCRVVQLKT 186

Query: 186 PPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARRLATDPEARQRRERALGLVRDXXX 245
           P   AIA+VL + DG+    A WAASVSGGH+GRARRLATD EAR+RRE  L +      
Sbjct: 187 PRPDAIAEVLAERDGIEPRMAQWAASVSGGHIGRARRLATDGEARERREAVLSVPLGLRR 246

Query: 246 XXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXXXXXXXXXXXXXXXMRGSAGAIKD 305
                                   D                          RG+  AI++
Sbjct: 247 FSDVFTAAGGLVKASETDAVAANEDRNEAEKEELRTAMGAGGTGKGTAAATRGANAAIRE 306

Query: 306 LERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAKADQPRANHPDMADRVAALAAHAT 365
           LE+RQKSR T                ++RD L+V +       NHPD A  V+  AA  T
Sbjct: 307 LEKRQKSRATRSQRDALDLALVDLAGFYRDVLVVRS-GSTAALNHPDFARSVSKAAAEWT 365

Query: 366 PERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
            E  LR +EAVL CR AL+ NVKP  AV+AM AA+
Sbjct: 366 SESTLRRLEAVLACRLALTQNVKPIIAVEAMAAAL 400


>tr|C8X989|C8X989_NAKMY Tax_Id=479431 SubName: Full=DNA-directed DNA
           polymerase; EC=2.7.7.7;[Nakamurella multipartita]
          Length = 412

 Score =  312 bits (800), Expect = 4e-83
 Identities = 174/358 (48%), Positives = 212/358 (59%), Gaps = 4/358 (1%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTHAWL TGP GSGRS+AA  FAAALQC    D GCG C  C T  A TH+DVR VIPEG
Sbjct: 49  MTHAWLFTGPAGSGRSVAARAFAAALQCA---DRGCGHCSHCRTVAAHTHSDVRAVIPEG 105

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           L+I V +MR +VQ+A+R P  GR+QIVLIEDADRLTEGA+NALLK VEEP   TVFLLCA
Sbjct: 106 LTISVKEMRQVVQLAARSPAAGRYQIVLIEDADRLTEGASNALLKAVEEPAEHTVFLLCA 165

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           PS  P+D++VT+RSRCR V L TP   AIA VL   DG+  ETA+WAASV+ GHVGRARR
Sbjct: 166 PSTHPDDVSVTIRSRCRVVGLRTPSAPAIADVLARRDGVDPETAHWAASVAAGHVGRARR 225

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LA D +AR++R + L L                            +              
Sbjct: 226 LARDEQAREQRRQVLALPTSLASVADVFEQSAELLARAKGEASSMSQTRDAAEIEELKTA 285

Query: 283 XXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAK 342
                         RGSAG +K++ERRQKSR T                ++RD L  S  
Sbjct: 286 LGAGGTGKGAVGAARGSAGVVKEMERRQKSRATRTERDVLDRALVDLSGFYRDVLARSLG 345

Query: 343 ADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
           +  P  N PDM  +V A+A    P+  L  ++AVL CREA+ +NVKP+ A++AMV A+
Sbjct: 346 STAPLLN-PDMPGQVDAVAKRLGPDGALAAVDAVLACREAIELNVKPQIAIEAMVMAL 402


>tr|A4XBZ5|A4XBZ5_SALTO Tax_Id=369723 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Salinispora
           tropica]
          Length = 427

 Score =  304 bits (779), Expect = 1e-80
 Identities = 171/358 (47%), Positives = 211/358 (58%), Gaps = 3/358 (0%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTHAW+ TGPPGSGRS+AA  FAAALQC      GCG C  C TTMAGTHADVR V+P+G
Sbjct: 70  MTHAWIFTGPPGSGRSVAARAFAAALQCGHGS--GCGACPGCHTTMAGTHADVRLVVPDG 127

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           LSIGV++MRA+V  A+  P+ GR Q+V+IEDADRLTE A NALLK VEEPP  TVFLLCA
Sbjct: 128 LSIGVNEMRALVLRAASTPSGGRWQVVVIEDADRLTEAAGNALLKAVEEPPPRTVFLLCA 187

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           PS+ P+DI+VT+RSRCR V L  P   A+A+VL+  DG+  + ANWAA+ + GHVGRARR
Sbjct: 188 PSIHPDDISVTIRSRCRVVPLRQPAPAAVAEVLVRRDGVEPDVANWAAAAAQGHVGRARR 247

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LA DP+AR RR+  L + R                           +D            
Sbjct: 248 LARDPQARTRRDAVLAVPRQLTGVGAAIDAAAALIGAAEAEAAALVADTDAAERAALETA 307

Query: 283 XXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAK 342
                         RG+AG +K+LERRQKSR T                ++RDAL ++  
Sbjct: 308 LGAGGTGRRAASAFRGAAGQVKELERRQKSRATRAQRDALDRALVDLAGFYRDALTMALG 367

Query: 343 ADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
           A      H D A    A A     +  LR +EAVL CR A+  NVKP+ AV+AM+ A+
Sbjct: 368 APVEPV-HTDTATVAGAGARKWEADGALRRLEAVLACRAAIEANVKPRIAVEAMMLAL 424


>tr|C6WFD1|C6WFD1_ACTMD Tax_Id=446462 SubName: Full=DNA-directed DNA
           polymerase; EC=2.7.7.7;[Actinosynnema mirum]
          Length = 399

 Score =  304 bits (778), Expect = 2e-80
 Identities = 172/361 (47%), Positives = 216/361 (59%), Gaps = 3/361 (0%)

Query: 41  GDMTHAWLITGPPGSGRSIAALCFAAALQCTSDGD-PGCGRCRSCLTTMAGTHADVRRVI 99
           G MTHAWL TGPPGSGR+ AA  FA ALQCT+  D PGCG C  C T +AGTHADVR V 
Sbjct: 38  GAMTHAWLFTGPPGSGRTEAARAFAGALQCTAADDRPGCGVCAGCHTALAGTHADVRVVA 97

Query: 100 PEGLSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFL 159
           PEGLSI V++MRA+VQ+++RRPT+GR Q+V++ DADRLTEGA+NALLK VEEPP  TVFL
Sbjct: 98  PEGLSISVNEMRALVQVSARRPTSGRWQVVIVADADRLTEGASNALLKAVEEPPDRTVFL 157

Query: 160 LCAPSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGR 219
           LCAPS  P D++VT+RSRCR V L +P    +A  L + +G+A + A+W+ASV+GG+V R
Sbjct: 158 LCAPSEHPYDVSVTIRSRCRVVRLGSPKVPDVAAAL-EEEGVAPDLASWSASVTGGNVVR 216

Query: 220 ARRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXX 279
           ARRLATD ++R RRE  L +                              D         
Sbjct: 217 ARRLATDEQSRLRRESVLAIPLALRRPADVFTCADDLVKAAEGDALSANEDRDEQERKAL 276

Query: 280 XXXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLV 339
                            RG+ GA+KDLE+RQKSR T                ++RD +LV
Sbjct: 277 ETAMGAGGTGKGTASATRGAKGALKDLEKRQKSRATRTQRDSLDQALVDLAAFYRD-VLV 335

Query: 340 SAKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAA 399
           +A   +   NHPD A      AA  + E  LR +EAVL CR AL  NVKP+ AV+AM+  
Sbjct: 336 TATGSEAALNHPDRAADARTAAAAWSRESTLRRLEAVLACRGALERNVKPRIAVEAMLTT 395

Query: 400 I 400
           +
Sbjct: 396 L 396


>tr|A8M5W5|A8M5W5_SALAI Tax_Id=391037 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Salinispora
           arenicola]
          Length = 424

 Score =  301 bits (772), Expect = 7e-80
 Identities = 171/358 (47%), Positives = 209/358 (58%), Gaps = 3/358 (0%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTHAW+ TGPPGSGRS+AA  FAAALQC      GCG C  C TTMAGTHADVR V+PEG
Sbjct: 67  MTHAWIFTGPPGSGRSVAARAFAAALQCLHG--TGCGSCPGCHTTMAGTHADVRLVVPEG 124

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           LSIGV++MRA+V  A+  P+ GR Q+V+IEDADRLTE A NALLK VEEPP  TVFLLCA
Sbjct: 125 LSIGVNEMRALVLRAASTPSGGRWQVVVIEDADRLTEAAGNALLKAVEEPPPRTVFLLCA 184

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           PS  P+DI+VT+RSRCR V L  P   A+A+VL+  DG+  + A WAA+ + GHVGRARR
Sbjct: 185 PSTHPDDISVTIRSRCRVVPLRQPAPAAVAEVLVRRDGVELDVARWAAAAAQGHVGRARR 244

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LA DPEAR RR+  L + R                           +D            
Sbjct: 245 LARDPEARARRDAVLAVPRQLTGVGAAIDAAAALIGAAEAEAAASVADTDAAERAALETA 304

Query: 283 XXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAK 342
                         RG+AG +K+LERRQKSR T                ++RDAL ++  
Sbjct: 305 LGAGGTGRGAAGAFRGAAGQVKELERRQKSRATRAQRDALDRALVDLAGFYRDALTMALH 364

Query: 343 ADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
           A     N  D +    A A     +  LR +EAVL CR A+  NVKP+ AV+AM+ A+
Sbjct: 365 APVEPVN-TDTSTVAGAGARKWEADGALRRLEAVLACRTAIEANVKPRIAVEAMMLAL 421


>tr|C4LLH9|C4LLH9_CORK4 Tax_Id=645127 SubName: Full=DNA polymerase
           III, delta' subunit; EC=2.7.7.7;[Corynebacterium
           kroppenstedtii]
          Length = 452

 Score =  293 bits (749), Expect = 3e-77
 Identities = 159/364 (43%), Positives = 215/364 (59%), Gaps = 5/364 (1%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTHAWL TGPPG+GRS+AA  FAA+L C  +  PGCG+C +C T +AGTH D+  ++PEG
Sbjct: 82  MTHAWLFTGPPGAGRSVAAKAFAASLMCKEE-TPGCGQCEACRTALAGTHTDIVTIVPEG 140

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           + I V  +R +++ ASR PTT + ++V++EDADRL +  ANALLK +EEPP  TVF+LCA
Sbjct: 141 VVIPVKQVRDMIEAASRMPTTAQWRVVIVEDADRLNDAGANALLKSIEEPPPRTVFILCA 200

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDND--GLAAETANWAASVSGGHVGRA 220
           PS DP+D+ VT+RSRCRHV + TP    +  +L D+   GL  +  +WAASVSGGHVGRA
Sbjct: 201 PSTDPDDVHVTIRSRCRHVYIPTPSIDEVKHILADDTALGLTDKQIDWAASVSGGHVGRA 260

Query: 221 RRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXX 280
           +RLA+D +AR +R+RAL +                            T++          
Sbjct: 261 KRLASDDQARTQRQRALRVPEKVYQDGDAYLYTGELVASAKKEAEAATAERDEAELAKLR 320

Query: 281 XXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVS 340
                           RGSAGA+K+LE +QK+R T                 +RDAL+VS
Sbjct: 321 EALGVGAKGRGAAKAQRGSAGAMKELETKQKNRRTRMVIDLLDLSLMDIAGLYRDALMVS 380

Query: 341 AKADQPR--ANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVA 398
             A   R  A HPD A+  A LA   TPE+LL+C++AV   RE L+  V+ + A+DAMV 
Sbjct: 381 VNAGGGRVPAIHPDHANTAAELARRNTPEQLLQCVDAVRMGRELLASGVRQEGALDAMVG 440

Query: 399 AIGQ 402
            + Q
Sbjct: 441 RLRQ 444


>tr|C0UA30|C0UA30_9ACTO Tax_Id=526225 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Geodermatophilus
           obscurus DSM 43160]
          Length = 386

 Score =  289 bits (740), Expect = 4e-76
 Identities = 163/359 (45%), Positives = 208/359 (57%), Gaps = 5/359 (1%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTHAWL TGPPGSGRS+AA  FAAALQC   GD   G C +C T +AGTHADV+ V+PEG
Sbjct: 28  MTHAWLFTGPPGSGRSVAARAFAAALQCPDGGD---GTCHACRTVLAGTHADVQTVVPEG 84

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           LSIGV ++R +V+IA R P+ GR Q+VL+EDADR+TE A+N +LK++EEPPA TVFLLCA
Sbjct: 85  LSIGVAEVRELVRIAGRAPSQGRWQVVLVEDADRMTEQASNTVLKMLEEPPARTVFLLCA 144

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           PS+ P+D+ VT+RSRCR V L TPP  A+A VL+  DG+    A W+A+ +GGHVGRAR 
Sbjct: 145 PSLHPDDVPVTIRSRCRVVGLRTPPVDAVADVLVRRDGVDPALAAWSAAAAGGHVGRARH 204

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LA D  AR  R+  L +                            +++            
Sbjct: 205 LARDETARLARKAVLDVPLSLVSLAACLNAADDLVGAAKEESDRASTELDGAETEAVKQS 264

Query: 283 XXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAK 342
                         RG AG +K+LE+RQKSR T                 +RDAL+V+  
Sbjct: 265 LGVGARGPGVAAASRG-AGQLKELEKRQKSRATRLGRDSLDRALVDLAALYRDALVVATS 323

Query: 343 ADQ-PRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
             +     HPD       LA    PE  LR I+AVL+CR AL  NVKP+ AV+A+  A+
Sbjct: 324 GTEGVTLAHPDRRADAEELARRIGPEGALRRIDAVLDCRRALEQNVKPQVAVEALTVAL 382


>tr|C4DLA3|C4DLA3_9ACTO Tax_Id=446470 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Stackebrandtia
           nassauensis DSM 44728]
          Length = 389

 Score =  287 bits (734), Expect = 2e-75
 Identities = 161/362 (44%), Positives = 209/362 (57%), Gaps = 8/362 (2%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTHAWL TGPPGSGRS+AA  FAAALQC + G   CG C +C T + GTHADV  VIP+G
Sbjct: 33  MTHAWLFTGPPGSGRSVAARAFAAALQCPNQG---CGSCPACHTVLGGTHADVTHVIPDG 89

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           ++IGV  MR ++  A R P TGR ++++IEDADRLTE A NALLK +EEPP  TVFLLCA
Sbjct: 90  VTIGVSVMRDLIGTAQRAPGTGRWRVLVIEDADRLTEAAGNALLKSIEEPPERTVFLLCA 149

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           PS +P +I+VT+RSRCR V L  P   A+A++L   DG+    A   AS + GHVGRA+R
Sbjct: 150 PSSNPAEISVTIRSRCRLVPLRQPSVAAVARLLETRDGVDPSLARLCASAAQGHVGRAKR 209

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LATDP+AR RR+  LG+ R                          T              
Sbjct: 210 LATDPQARDRRDTVLGVPRQLSSVGACFTAADAIIEASESEATDATKGQAEREIAELETA 269

Query: 283 XXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALL--VS 340
                         RG+AG IK+LERRQK R T                ++RD L+  + 
Sbjct: 270 LGKGGTGKGASKATRGNAGQIKELERRQKMRLTRAQRDTLDRALVDLAAFYRDVLIQGLG 329

Query: 341 AKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
           A+ D     HPD A+ V A A+  +PE ++R I+A+L CR A+  NV+P+ AV++M+  +
Sbjct: 330 ARVD---PIHPDAAEAVTAAASRWSPESVIRRIDAILQCRIAIDRNVRPRIAVESMMLKL 386

Query: 401 GQ 402
            Q
Sbjct: 387 WQ 388


>tr|C7PWW6|C7PWW6_CATAD Tax_Id=479433 SubName: Full=DNA-directed DNA
           polymerase; EC=2.7.7.7;[Catenulispora acidiphila]
          Length = 395

 Score =  268 bits (685), Expect = 9e-70
 Identities = 157/360 (43%), Positives = 198/360 (55%), Gaps = 11/360 (3%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTHAWL+TGPPGSGRS AA  FAAALQCT+ G+PGCG C  C T + GTH DV ++  + 
Sbjct: 36  MTHAWLLTGPPGSGRSTAARAFAAALQCTTAGEPGCGYCLGCRTVLDGTHPDVLQLATDQ 95

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           LSIGV D R +V+ +S  P++GR Q++LIEDADRLTE A N LLK VEEP   T+++LCA
Sbjct: 96  LSIGVADTRGLVRRSSMTPSSGRWQVLLIEDADRLTEAAGNVLLKAVEEPSPRTIWILCA 155

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           P  D  D+  T+RSRCRH+ L TPP++A+A++L+  DG+    A  AA  + GH+GRA+R
Sbjct: 156 PGRD--DMLPTIRSRCRHLLLRTPPSSAVAEILVRRDGVDPIRAREAARAAQGHIGRAKR 213

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LATD EAR +R+  L L                              D            
Sbjct: 214 LATDDEARAKRKAVLALASS---LTDIGSALSAAQKLVDATIAEAKHDADERNVIETADM 270

Query: 283 XXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVSAK 342
                        + G+AGA+KDLE RQK R T                ++RD L V   
Sbjct: 271 RLALGYQEGSRKAVPGAAGALKDLESRQKKRATRMQRDALDLALVDLAAFYRDVLAVQLG 330

Query: 343 A------DQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAM 396
           A      D     H D    V  +AA  TPE  LR IEAVL CR+A+  NV P  AV+AM
Sbjct: 331 AIGGPGGDVTEPIHDDQYAAVRKIAAAGTPEATLRRIEAVLACRKAVERNVAPLLAVEAM 390


>tr|C1YIK8|C1YIK8_NOCDA Tax_Id=446468 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 390

 Score =  266 bits (679), Expect = 5e-69
 Identities = 159/360 (44%), Positives = 197/360 (54%), Gaps = 10/360 (2%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTHAWL TGPPGSGRS AA  FAAALQC    D GCG C SC  T+AGTH DV  V P G
Sbjct: 36  MTHAWLFTGPPGSGRSEAARAFAAALQCR---DGGCGHCASCHQTLAGTHPDVLYVRPSG 92

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           LS GV   R +V  A  +P+ GR +IVL EDADR TE A+NALLK VEEP   TV+LLC 
Sbjct: 93  LSFGVAATRDLVLRAGSKPSGGRFRIVLFEDADRATEAASNALLKAVEEPSPRTVWLLCT 152

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           P+  P+D+ VT+RSRCR V L TP T  +   L+  DG+ AETA  AA  + G + RAR+
Sbjct: 153 PT--PDDLLVTIRSRCRMVTLATPGTRELVDALVQRDGIDAETARAAAVAASGRIDRARQ 210

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LATDPEAR+RRE  L +                            T+             
Sbjct: 211 LATDPEARRRREEVLSIPARLDGLGACVTSAARLYEIAEEESKALTTALDEKEREELRAA 270

Query: 283 XXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALL--VS 340
                        MRGSAGA+KDLE RQK R T                ++RDAL   + 
Sbjct: 271 FGEGSTGKGVAKAMRGSAGAMKDLEERQKRRATRIKRDSYDRALLDLVAFYRDALTLQLG 330

Query: 341 AKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
           A+ +   A      +RV   A  +TPE  LR I+A++ CRE ++ NV P+ A++AM +A+
Sbjct: 331 ARVELSTAERSGDLERV---ARSSTPESTLRRIDAIMECRERIAANVHPQIAMEAMTSAL 387


>tr|Q8FSS1|Q8FSS1_COREF Tax_Id=152794 SubName: Full=DNA polymerase
           III delta' subunit;[Corynebacterium efficiens]
          Length = 414

 Score =  259 bits (661), Expect = 6e-67
 Identities = 144/361 (39%), Positives = 189/361 (52%), Gaps = 1/361 (0%)

Query: 40  DGDMTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVI 99
           D   TH+WL TGPPGSGRS+AA  FAAAL C+   + GCGRC  C  T+A TH DV  + 
Sbjct: 48  DSTFTHSWLFTGPPGSGRSVAARAFAAALVCSDPDEVGCGRCEHCRATLADTHGDVVFIQ 107

Query: 100 PEGLSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFL 159
           P  LSIG+D MR +V  A+R PT    +++++E+ADRLTE A NALLK VEEPP  T+ +
Sbjct: 108 PHELSIGIDLMRTVVDDAARLPTVSNWRVIILENADRLTEPAGNALLKTVEEPPERTIII 167

Query: 160 LCAPSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGR 219
           LCAPS DPEDI VTLRSRCRHV + TP    + ++L+   G+A + A  AA+ SGGH+GR
Sbjct: 168 LCAPSTDPEDIMVTLRSRCRHVYIPTPTIEQVTRILVSEGGVAEDDARLAAASSGGHIGR 227

Query: 220 ARRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXX 279
           AR L  + + + RR   L L                                        
Sbjct: 228 ARHLVHNQKVQVRRANILNLSELIFHGDQAFQAVNSLIKGIEKEMVETLEPLEEQEREKL 287

Query: 280 XXXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLV 339
                           ++G+ G +K LE  QK R T                 +RDAL+V
Sbjct: 288 ETSLGMGSRGKGVHKALQGTGGQLKALEDNQKKRRTRFLRDALDLALIDLAGIYRDALVV 347

Query: 340 SAKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAA 399
           ++ A +    HPDM      LA   TPE LL C++A+   RE    NV+P  A+DA+V  
Sbjct: 348 ASGA-EVGLTHPDMEGLSTELATKVTPEGLLDCLDAINKSREYFGQNVRPVVAMDALVGR 406

Query: 400 I 400
           +
Sbjct: 407 L 407


>tr|C8NKG7|C8NKG7_COREF Tax_Id=196164 (holB)SubName: Full=DNA
           polymerase III, delta' subunit;
           EC=2.7.7.7;[Corynebacterium efficiens YS-314]
          Length = 417

 Score =  259 bits (661), Expect = 6e-67
 Identities = 144/361 (39%), Positives = 189/361 (52%), Gaps = 1/361 (0%)

Query: 40  DGDMTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVI 99
           D   TH+WL TGPPGSGRS+AA  FAAAL C+   + GCGRC  C  T+A TH DV  + 
Sbjct: 51  DSTFTHSWLFTGPPGSGRSVAARAFAAALVCSDPDEVGCGRCEHCRATLADTHGDVVFIQ 110

Query: 100 PEGLSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFL 159
           P  LSIG+D MR +V  A+R PT    +++++E+ADRLTE A NALLK VEEPP  T+ +
Sbjct: 111 PHELSIGIDLMRTVVDDAARLPTVSNWRVIILENADRLTEPAGNALLKTVEEPPERTIII 170

Query: 160 LCAPSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGR 219
           LCAPS DPEDI VTLRSRCRHV + TP    + ++L+   G+A + A  AA+ SGGH+GR
Sbjct: 171 LCAPSTDPEDIMVTLRSRCRHVYIPTPTIEQVTRILVSEGGVAEDDARLAAASSGGHIGR 230

Query: 220 ARRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXX 279
           AR L  + + + RR   L L                                        
Sbjct: 231 ARHLVHNQKVQVRRANILNLSELIFHGDQAFQAVNSLIKGIEKEMVETLEPLEEQEREKL 290

Query: 280 XXXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLV 339
                           ++G+ G +K LE  QK R T                 +RDAL+V
Sbjct: 291 ETSLGMGSRGKGVHKALQGTGGQLKALEDNQKKRRTRFLRDALDLALIDLAGIYRDALVV 350

Query: 340 SAKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAA 399
           ++ A +    HPDM      LA   TPE LL C++A+   RE    NV+P  A+DA+V  
Sbjct: 351 ASGA-EVGLTHPDMEGLSTELATKVTPEGLLDCLDAINKSREYFGQNVRPVVAMDALVGR 409

Query: 400 I 400
           +
Sbjct: 410 L 410


>tr|C8RUZ9|C8RUZ9_CORJE Tax_Id=525262 (holB)SubName: Full=DNA
           polymerase III, delta' subunit;
           EC=2.7.7.7;[Corynebacterium jeikeium ATCC 43734]
          Length = 415

 Score =  258 bits (660), Expect = 7e-67
 Identities = 152/368 (41%), Positives = 192/368 (52%), Gaps = 11/368 (2%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTH+WL TGPPGSGRSIAA  FA AL C   G   CG C  C +  AGTH D+  V   G
Sbjct: 46  MTHSWLFTGPPGSGRSIAAKVFATALVCPHGG---CGECEQCRSAAAGTHPDILWVSTTG 102

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           + + VD++R  +  A+  PT  R ++V++EDADRL + AANALLK VEEPPA TVFLLCA
Sbjct: 103 VVLTVDEIRGAIHEAANMPTVARWRVVVVEDADRLNDAAANALLKSVEEPPARTVFLLCA 162

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDND--GLAAETANWAASVSGGHVGRA 220
           PS DP DIA+TLRSRCRHV + TP   A+  VL+ +   GL    A WAA VS GH+GRA
Sbjct: 163 PSTDPSDIAITLRSRCRHVYVPTPSPAAVKGVLLSDATLGLNETQAQWAADVSAGHIGRA 222

Query: 221 RRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXX 280
           R LA+D  AR +R  AL L +                                       
Sbjct: 223 RHLASDEAARTKRATALKLPQLVYEPNALFRFTSELVKKAEEEAASELEKLDQREREELE 282

Query: 281 XXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVS 340
                           RG++G +K+LE+ QK+R T                 +RDA+L +
Sbjct: 283 SSLGVGAKGKGAAKAQRGASGRMKELEKEQKNRRTRRTRDSLDLALIDIAGLYRDAMLQA 342

Query: 341 AKADQPRA------NHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVD 394
           A A            HPDMA     LA   +   L+ CI+AV+ CRE L  NV+P+ A+D
Sbjct: 343 AGAVDGDGVPVGGHQHPDMAATSKELARRNSASALVSCIDAVMECREVLGYNVRPEVALD 402

Query: 395 AMVAAIGQ 402
           AM   + Q
Sbjct: 403 AMAGRLQQ 410


>tr|B1VI07|B1VI07_CORU7 Tax_Id=504474 SubName: Full=DNA polymerase
           III, delta' subunit; EC=2.7.7.7;[Corynebacterium
           urealyticum]
          Length = 448

 Score =  257 bits (657), Expect = 2e-66
 Identities = 153/389 (39%), Positives = 194/389 (49%), Gaps = 34/389 (8%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTH+WL TGPPGSGRSIAA  FA  L C + G   CG C  C +   GTH D+  +   G
Sbjct: 56  MTHSWLFTGPPGSGRSIAAKAFATGLVCPNGG---CGECEQCQSAATGTHPDIVWIATTG 112

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
             I V+D+R ++  A+  PT  R ++V++EDADRL E  +NALLK VEEPPA TVF+LCA
Sbjct: 113 SVIPVEDVREVISSAASMPTVSRWRVVVVEDADRLNEAGSNALLKSVEEPPAHTVFVLCA 172

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDND--GLAAETANWAASVSGGHVGRA 220
           PS DP DI++TLRSRCRHV + TP    +  VL+ +   G+  E A WAA VSGGH+GRA
Sbjct: 173 PSTDPLDISITLRSRCRHVYIPTPSPQQVEDVLLQDASLGITQEQARWAAGVSGGHIGRA 232

Query: 221 RRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXX 280
           R LA D  AR +R  AL L +                                       
Sbjct: 233 RHLARDEAARTKRATALKLPQMVYEGARLFSFTSQLVAKATEEVAAQVEAVEAKEREALE 292

Query: 281 XXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVS 340
                           RGSAG +K+LER QK+R T                 +RDA+L +
Sbjct: 293 ESLGVGAKGRGAAKAQRGSAGQMKELEREQKNRRTRMVRDALDLALIDVVGLYRDAMLQA 352

Query: 341 AKADQPRA-----------------------------NHPDMADRVAALAAHATPERLLR 371
           A A +P                                HPDM      LA   +PE L+R
Sbjct: 353 AGAVEPVGGSADAAEVATGDTDGTAAAAHGLQPVGGFQHPDMRATSGELARRNSPEALVR 412

Query: 372 CIEAVLNCREALSINVKPKFAVDAMVAAI 400
           CI+AV  CRE L +NVKP+ A+DA+  A+
Sbjct: 413 CIDAVSACRETLGMNVKPEVALDALGGAL 441


>tr|Q4JSS5|Q4JSS5_CORJK Tax_Id=306537 (holB)SubName: Full=DNA
           polymerase III, delta' subunit;
           EC=2.7.7.7;[Corynebacterium jeikeium]
          Length = 415

 Score =  255 bits (652), Expect = 6e-66
 Identities = 151/368 (41%), Positives = 191/368 (51%), Gaps = 11/368 (2%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTH+WL TGPPGSGRSIAA  FA AL C   G   CG C  C +  AGTH D+  V   G
Sbjct: 46  MTHSWLFTGPPGSGRSIAAKVFATALVCPHGG---CGECEQCRSAAAGTHPDILWVSTTG 102

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           + + VD++R  +  A+  PT  R ++V++EDADRL + AANALLK VEEPPA TVFLLCA
Sbjct: 103 VVLTVDEIRGAIHEAANMPTVARWRVVVVEDADRLNDAAANALLKSVEEPPARTVFLLCA 162

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDND--GLAAETANWAASVSGGHVGRA 220
           PS DP DIA+TLRSRCRHV + TP   A+  VL+ +   GL    A WAA VS GH+GRA
Sbjct: 163 PSTDPSDIAITLRSRCRHVYVPTPSPAAVKGVLLSDATLGLNETQAQWAADVSAGHIGRA 222

Query: 221 RRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXX 280
           R LA+D  AR +R  AL L +                                       
Sbjct: 223 RHLASDEAARTKRATALKLPQLVYEPNALYRFTSELVKKAEEEAASELEKLDQREREELE 282

Query: 281 XXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDALLVS 340
                            G++G +K+LE+ QK+R T                 +RDA+L +
Sbjct: 283 SSLGVGAKGKGAAKAQWGASGRMKELEKEQKNRRTRRTRDSLDLALIDIAGLYRDAMLQA 342

Query: 341 AKADQPRA------NHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVD 394
           A A            HPDMA     LA   +   L+ CI+AV+ CRE L  NV+P+ A+D
Sbjct: 343 AGAVDGDGVPVGGHQHPDMAATSKELARRNSASALVSCIDAVMECREVLGYNVRPEVALD 402

Query: 395 AMVAAIGQ 402
           AM   + Q
Sbjct: 403 AMAGRLQQ 410


>tr|C9NA19|C9NA19_9ACTO Tax_Id=591167 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Streptomyces
           flavogriseus ATCC 33331]
          Length = 444

 Score =  252 bits (643), Expect = 7e-65
 Identities = 159/366 (43%), Positives = 193/366 (52%), Gaps = 18/366 (4%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSD-----GDPGCGRCRSCLTTMAGTHADVRR 97
           MTHAWL TGPPGSGR+ AA  FAAALQCTS      G PGCG C  C T + GTHADV  
Sbjct: 86  MTHAWLFTGPPGSGRATAARAFAAALQCTSPDRAMGGAPGCGFCDGCHTALIGTHADVEV 145

Query: 98  VIPEGLSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTV 157
           +  + LSIGV + R +V+ A   P  GR Q++++EDADRLTEGA N LLK VEEP   TV
Sbjct: 146 IRTDLLSIGVKETRELVRRAQLSPAVGRWQVIVMEDADRLTEGAGNVLLKAVEEPAPRTV 205

Query: 158 FLLCAPSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHV 217
           +LLC+PS+  ED+  T+RSRCRH+ L TPP  A+A VLI  DG+  E A  AA  + GH+
Sbjct: 206 WLLCSPSL--EDVLPTIRSRCRHLTLRTPPVEAVADVLIRRDGIDPERAASAARATQGHI 263

Query: 218 GRARRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXX 277
           GRARRLATD  AR RR   L L                            T D       
Sbjct: 264 GRARRLATDERARARRAAVLKL-------PLRVHDVGGCLKSAQELIDTATDDAKQVAEE 316

Query: 278 XXXXXXXXXXXXXXXXXXMRGSAG---AIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFR 334
                              R   G   A+K+LE RQK R T                ++R
Sbjct: 317 IDVKETDDLKAALGAVAGGRMPRGTAGAMKELEDRQKRRRTRTQRDSLDLALSELTGFYR 376

Query: 335 DALLVSAKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVD 394
           D L +   +    AN  D+ D +  +A  +TPER LR IEAV  CR AL  NV P  AV+
Sbjct: 377 DVLALQLGSRIALAN-TDVRDALDRVAESSTPERTLRRIEAVFACRRALDRNVAPLLAVE 435

Query: 395 AMVAAI 400
           +M  A+
Sbjct: 436 SMTVAL 441


>tr|B5G9L0|B5G9L0_9ACTO Tax_Id=465543 SubName: Full=DNA polymerase
           III subunit delta;[Streptomyces sp. SPB74]
          Length = 401

 Score =  251 bits (642), Expect = 9e-65
 Identities = 154/363 (42%), Positives = 194/363 (53%), Gaps = 12/363 (3%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSD-----GDPGCGRCRSCLTTMAGTHADVRR 97
           MTHAWL TGPPGSGR+ AA  FAAALQC S      G+PGCG C  C T + GTHADV  
Sbjct: 43  MTHAWLFTGPPGSGRAEAARAFAAALQCVSPDRALGGEPGCGFCEGCHTALIGTHADVEF 102

Query: 98  VIPEGLSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTV 157
           V  + LSIGV + R +V+ A   P TGR Q++++EDADRLTEGA N LLK VEEP   TV
Sbjct: 103 VRTDLLSIGVKETRDLVRRAQLSPATGRWQVIVLEDADRLTEGAGNVLLKAVEEPAPRTV 162

Query: 158 FLLCAPSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHV 217
           +LLCAPS+  ED+  T+RSRCRH++L TPP  A+A +L+  DG+    A   A  + GH+
Sbjct: 163 WLLCAPSL--EDVLPTIRSRCRHLSLRTPPVEAVADLLVRRDGVDPALAASVARATQGHI 220

Query: 218 GRARRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXX 277
            RARRLATD  AR RR   L L                              +       
Sbjct: 221 DRARRLATDERARARRAAVLKL----PVRLGDVGAGLRAAQELIDAAGDDAKEVAEVTDE 276

Query: 278 XXXXXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDAL 337
                              RG+AGA+K+L+ RQK R T                ++RD L
Sbjct: 277 KETEELRAALGAQAGGRLPRGTAGAMKELQDRQKRRSTRTQRDSLDLALLDLTGFYRDVL 336

Query: 338 LVSAKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMV 397
            +   A    AN  D+ D V  +A  + PE  LR +EA+  CREAL+ NV P  AV++M 
Sbjct: 337 ALQFGAGAEIANE-DVRDSVERVARDSRPESTLRRMEAIGACREALARNVAPLLAVESMA 395

Query: 398 AAI 400
            A+
Sbjct: 396 MAL 398


>tr|B4VDJ3|B4VDJ3_9ACTO Tax_Id=465541 SubName: Full=DNA polymerase
           III subunit delta;[Streptomyces sp. Mg1]
          Length = 403

 Score =  251 bits (641), Expect = 1e-64
 Identities = 156/363 (42%), Positives = 192/363 (52%), Gaps = 10/363 (2%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSD-----GDPGCGRCRSCLTTMAGTHADVRR 97
           MTHAWL TGPPGSGRS AA  FAAALQCTS      G+PGCG C  C TT+ GTHADV  
Sbjct: 43  MTHAWLFTGPPGSGRSTAARAFAAALQCTSPDRALGGEPGCGFCDGCHTTLIGTHADVEI 102

Query: 98  VIPEGLSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTV 157
           V  + LSIGV + R +V+ A   P  GR Q++++EDADRLTEGA N LLK VEEP   TV
Sbjct: 103 VRTDLLSIGVKETRDLVRRAQLSPAVGRWQVIVLEDADRLTEGAGNVLLKAVEEPAPRTV 162

Query: 158 FLLCAPSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHV 217
           +LLCAPS+  ED+  T+RSRCRH+ L TPP +A+A VL+  DG+    A  AA  + GH+
Sbjct: 163 WLLCAPSL--EDVLPTIRSRCRHLTLRTPPVSAVADVLVRRDGIDPAVAEAAARATQGHI 220

Query: 218 GRARRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXX 277
           GRARRLATD  A  R  RA  L                                      
Sbjct: 221 GRARRLATDEAA--RARRAAVLKLPLRVDDVGGCLKAAQELIDAAAEDAKQVAEEVDTKE 278

Query: 278 XXXXXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDAL 337
                              RG+AG +K+LE RQK R T                ++RD L
Sbjct: 279 TEELRAALGAAAGTGGRMPRGTAGVMKELEDRQKRRRTRTQRDTLDLALTDLTGFYRDVL 338

Query: 338 LVSAKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMV 397
            +   +    AN     D +  +A  + PER LR IEA++ CR AL  NV P  AV+AM 
Sbjct: 339 ALQLGSAVAIANEEIRQD-LDRIARASGPERTLRRIEAIIACRSALDRNVAPLLAVEAMT 397

Query: 398 AAI 400
            ++
Sbjct: 398 MSL 400


>tr|B5HA97|B5HA97_STRPR Tax_Id=457429 SubName: Full=DNA polymerase
           III subunit delta;[Streptomyces pristinaespiralis ATCC
           25486]
          Length = 401

 Score =  250 bits (639), Expect = 2e-64
 Identities = 154/363 (42%), Positives = 189/363 (52%), Gaps = 12/363 (3%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSD-----GDPGCGRCRSCLTTMAGTHADVRR 97
           MTHAWL TGPPGSGR  AA  FAAALQCT       G PGCG C  C T + GTHADV  
Sbjct: 43  MTHAWLFTGPPGSGRVTAARAFAAALQCTGPDRALGGTPGCGFCDGCHTALIGTHADVSW 102

Query: 98  VIPEGLSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTV 157
           +   G  I V DMR  V+ +   P  GR Q++L+EDA+RL E +ANA+LK VEEP   TV
Sbjct: 103 IAATGTQILVSDMRDTVRKSFTAPANGRWQVILVEDAERLNERSANAVLKAVEEPAPRTV 162

Query: 158 FLLCAPSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHV 217
           +LLCAPSV  ED+  T+RSRCRH+ L TPP  A+A VLI  DG+  + A  AA  + GH+
Sbjct: 163 WLLCAPSV--EDVLPTIRSRCRHLTLRTPPVAAVADVLIRRDGVEPDLAATAARATQGHI 220

Query: 218 GRARRLATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXX 277
           GRARRLATD  AR RR   L +                              D       
Sbjct: 221 GRARRLATDERARARRSAVLKMPLRVEDIGGCLRAAQELVDAAADDAKQVAEDTDVKETE 280

Query: 278 XXXXXXXXXXXXXXXXXXMRGSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFRDAL 337
                              RG+AG +K+LE  QK R T                ++RD L
Sbjct: 281 ELRAALGASEGGRMP----RGTAGLMKELEDLQKRRKTRTQRDSLDLALTDLTGFYRDVL 336

Query: 338 LVSAKADQPRANHPDMADRVAALAAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMV 397
            +   +    AN  D+ D +  +A  +TPE  LR IEA++ CREAL  NV P  AV+AM 
Sbjct: 337 ALQMGSRVALANE-DVRDSLDRIARSSTPESTLRRIEAIVACREALERNVAPLLAVEAMT 395

Query: 398 AAI 400
            A+
Sbjct: 396 VAL 398


>tr|A0LWD2|A0LWD2_ACIC1 Tax_Id=351607 SubName: Full=DNA polymerase
           III, delta prime subunit; EC=2.7.7.7;[Acidothermus
           cellulolyticus]
          Length = 442

 Score =  250 bits (638), Expect = 3e-64
 Identities = 153/400 (38%), Positives = 198/400 (49%), Gaps = 45/400 (11%)

Query: 43  MTHAWLITGPPGSGRSIAALCFAAALQCTSDGDPGCGRCRSCLTTMAGTHADVRRVIPEG 102
           MTHAWL  GPPGSGRS+AA  FAAALQC +  +PGCG C  C T +AGTH DV  V P+G
Sbjct: 33  MTHAWLFVGPPGSGRSVAARAFAAALQCRA-AEPGCGECTDCRTVLAGTHPDVTIVRPQG 91

Query: 103 LSIGVDDMRAIVQIASRRPTTGRHQIVLIEDADRLTEGAANALLKVVEEPPASTVFLLCA 162
           LS+GV + R +V  A+  P   R Q+V++EDADRLTEGAAN LLK +EEP   TV+LLC 
Sbjct: 92  LSLGVAEARELVARAALAPANARWQVVVLEDADRLTEGAANVLLKAIEEPAPRTVWLLCV 151

Query: 163 PSVDPEDIAVTLRSRCRHVALVTPPTTAIAQVLIDNDGLAAETANWAASVSGGHVGRARR 222
           P+  P D+  T+RSRCR V L TPP  A+A++LI  +G+AA+TA  AA  +G H+GRA R
Sbjct: 152 PA--PHDLVPTIRSRCRLVTLRTPPVAAVAELLIRRNGVAADTAELAARAAGAHIGRALR 209

Query: 223 LATDPEARQRRERALGLVRDXXXXXXXXXXXXXXXXXXXXXXXXXTSDXXXXXXXXXXXX 282
           LATD  AR RR   L                              T++            
Sbjct: 210 LATDARARARRSAVLEAAARLAGPIDLGGCLRVAADLVDAATSEATTETEALDQAETAAL 269

Query: 283 XXXXXXXXXXXXXMR--------GSAGAIKDLERRQKSRHTXXXXXXXXXXXXXXXTYFR 334
                         R        GS+ A+++LE RQKSR +                +FR
Sbjct: 270 REALGEGGTASGDRRRVASGVLRGSSAALRELEARQKSRASRAQRDALDRTLMDLAGFFR 329

Query: 335 DALLVS----------------------------------AKADQPRANHPDMADRVAAL 360
           D LLV                                   A   +P   + D+ DR+  +
Sbjct: 330 DVLLVQLGVAAETVSGVAEAVPGVAEGVSGAGAAGAVPGVAARSRPWVMNADVLDRIRDV 389

Query: 361 AAHATPERLLRCIEAVLNCREALSINVKPKFAVDAMVAAI 400
           AA +TPE  L  I+A++ CR AL+ N  P  A +A+   I
Sbjct: 390 AARSTPEMTLHRIDAIMECRAALAANANPLLAFEALAIQI 429


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.321    0.133    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 2,313,108,516
Number of extensions: 83744485
Number of successful extensions: 263040
Number of sequences better than 10.0: 4182
Number of HSP's gapped: 259421
Number of HSP's successfully gapped: 4374
Length of query: 405
Length of database: 3,846,993,858
Length adjustment: 140
Effective length of query: 265
Effective length of database: 2,268,465,438
Effective search space: 601143341070
Effective search space used: 601143341070
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)