BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_5143
         (107 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HJ84|B2HJ84_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp...    50   8e-05
tr|C6DMV6|C6DMV6_MYCTK Tax_Id=478434 SubName: Full=Putative unch...    40   0.085
tr|A5U8X8|A5U8X8_MYCTA Tax_Id=419947 SubName: Full=Putative unch...    40   0.085
tr|Q8VIW5|Q8VIW5_MYCTU Tax_Id=1773 SubName: Full=Putative unchar...    40   0.085
tr|A5WTM0|A5WTM0_MYCTF Tax_Id=336982 SubName: Full=Putative unch...    40   0.085
tr|A2VM37|A2VM37_MYCTU Tax_Id=348776 SubName: Full=Putative unch...    40   0.085
tr|A0QA56|A0QA56_MYCA1 Tax_Id=243243 SubName: Full=Putative unch...    33   7.9  

>tr|B2HJ84|B2HJ84_MYCMM Tax_Id=216594 SubName: Full=Conserved
           hypothetical membrane protein;[Mycobacterium marinum]
          Length = 107

 Score = 50.1 bits (118), Expect = 8e-05
 Identities = 36/107 (33%), Positives = 36/107 (33%)

Query: 1   MIAVLLCIAGTGVYLGAAMVARHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MIAVLLCIAGTGVYLGAAMVARH                                     
Sbjct: 1   MIAVLLCIAGTGVYLGAAMVARHRAQTSADLAALAGAARLSSGAAQACARAAAVARAMRV 60

Query: 61  XXXXCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTPERAHSIHRQ 107
               C                              DTPERAHSIHRQ
Sbjct: 61  GDVGCVVRELDVVVTVEVPIGIVGAARAVARAGPIDTPERAHSIHRQ 107


>tr|C6DMV6|C6DMV6_MYCTK Tax_Id=478434 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 107

 Score = 40.0 bits (92), Expect = 0.085
 Identities = 16/23 (69%), Positives = 20/23 (86%)

Query: 1  MIAVLLCIAGTGVYLGAAMVARH 23
          M+AVLLC+ G G YLG+A+VARH
Sbjct: 6  MVAVLLCVTGAGAYLGSAVVARH 28


>tr|A5U8X8|A5U8X8_MYCTA Tax_Id=419947 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 107

 Score = 40.0 bits (92), Expect = 0.085
 Identities = 16/23 (69%), Positives = 20/23 (86%)

Query: 1  MIAVLLCIAGTGVYLGAAMVARH 23
          M+AVLLC+ G G YLG+A+VARH
Sbjct: 6  MVAVLLCVTGAGAYLGSAVVARH 28


>tr|Q8VIW5|Q8VIW5_MYCTU Tax_Id=1773 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 102

 Score = 40.0 bits (92), Expect = 0.085
 Identities = 16/23 (69%), Positives = 20/23 (86%)

Query: 1  MIAVLLCIAGTGVYLGAAMVARH 23
          M+AVLLC+ G G YLG+A+VARH
Sbjct: 1  MVAVLLCVTGAGAYLGSAVVARH 23


>tr|A5WTM0|A5WTM0_MYCTF Tax_Id=336982 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 102

 Score = 40.0 bits (92), Expect = 0.085
 Identities = 16/23 (69%), Positives = 20/23 (86%)

Query: 1  MIAVLLCIAGTGVYLGAAMVARH 23
          M+AVLLC+ G G YLG+A+VARH
Sbjct: 1  MVAVLLCVTGAGAYLGSAVVARH 23


>tr|A2VM37|A2VM37_MYCTU Tax_Id=348776 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 107

 Score = 40.0 bits (92), Expect = 0.085
 Identities = 16/23 (69%), Positives = 20/23 (86%)

Query: 1  MIAVLLCIAGTGVYLGAAMVARH 23
          M+AVLLC+ G G YLG+A+VARH
Sbjct: 6  MVAVLLCVTGAGAYLGSAVVARH 28


>tr|A0QA56|A0QA56_MYCA1 Tax_Id=243243 SubName: Full=Putative
          uncharacterized protein;[Mycobacterium avium]
          Length = 97

 Score = 33.5 bits (75), Expect = 7.9
 Identities = 15/23 (65%), Positives = 17/23 (73%)

Query: 1  MIAVLLCIAGTGVYLGAAMVARH 23
          M+ VLL   G  VYLGAA+VARH
Sbjct: 1  MVVVLLSATGAAVYLGAAVVARH 23


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.331    0.138    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 240,681,078
Number of extensions: 2169173
Number of successful extensions: 5414
Number of sequences better than 10.0: 7
Number of HSP's gapped: 5414
Number of HSP's successfully gapped: 7
Length of query: 107
Length of database: 3,846,993,858
Length adjustment: 75
Effective length of query: 32
Effective length of database: 3,001,353,633
Effective search space: 96043316256
Effective search space used: 96043316256
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 75 (33.5 bits)