BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_5146
         (267 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HK54|B2HK54_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp...   160   1e-37
tr|A0PV91|A0PV91_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp...   159   3e-37
tr|Q7TW05|Q7TW05_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSER...   110   2e-22
tr|O69626|O69626_MYCTU Tax_Id=1773 SubName: Full=PROBABLE CONSER...   110   2e-22
tr|C6DMW0|C6DMW0_MYCTK Tax_Id=478434 SubName: Full=Conserved mem...   110   2e-22
tr|C1AIB0|C1AIB0_MYCBT Tax_Id=561275 SubName: Full=Putative tran...   110   2e-22
tr|A5U8Y1|A5U8Y1_MYCTA Tax_Id=419947 SubName: Full=Putative cons...   110   2e-22
tr|A1KPY7|A1KPY7_MYCBP Tax_Id=410289 SubName: Full=Probable cons...   110   2e-22
tr|A5WTM4|A5WTM4_MYCTF Tax_Id=336982 SubName: Full=Conserved tra...   110   2e-22
tr|A2VM41|A2VM41_MYCTU Tax_Id=348776 SubName: Full=Putative unch...   110   2e-22
tr|Q744C4|Q744C4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   100   2e-19
tr|A0QA52|A0QA52_MYCA1 Tax_Id=243243 SubName: Full=Bacterial typ...   100   2e-19
tr|A0R5F0|A0R5F0_MYCS2 Tax_Id=246196 SubName: Full=Bacterial typ...    97   2e-18
tr|A3Q728|A3Q728_MYCSJ Tax_Id=164757 SubName: Full=Type II secre...    91   2e-16
tr|Q1B2H6|Q1B2H6_MYCSS Tax_Id=164756 SubName: Full=Type II secre...    89   5e-16
tr|A1UMM2|A1UMM2_MYCSK Tax_Id=189918 SubName: Full=Type II secre...    89   5e-16
tr|A1TG77|A1TG77_MYCVP Tax_Id=350058 SubName: Full=Type II secre...    85   1e-14
tr|A4T5S2|A4T5S2_MYCGI Tax_Id=350054 SubName: Full=Type II secre...    84   2e-14
tr|B1MGN6|B1MGN6_MYCA9 Tax_Id=561007 SubName: Full=Conserved hyp...    64   2e-08
tr|Q5Z2Y9|Q5Z2Y9_NOCFA Tax_Id=37329 SubName: Full=Putative uncha...    52   9e-05
tr|Q0S8K5|Q0S8K5_RHOSR Tax_Id=101510 SubName: Full=Putative unch...    49   6e-04
tr|C1B9Z5|C1B9Z5_RHOOB Tax_Id=632772 SubName: Full=Hypothetical ...    49   6e-04
tr|C0ZNG1|C0ZNG1_RHOE4 Tax_Id=234621 SubName: Full=Conserved hyp...    48   0.001
tr|C3JWG1|C3JWG1_RHOER Tax_Id=596309 SubName: Full=Bacterial typ...    48   0.001
tr|C2AJU5|C2AJU5_TSUPA Tax_Id=521096 SubName: Full=Flp pilus ass...    45   0.006
tr|A4F6P2|A4F6P2_SACEN Tax_Id=405948 SubName: Full=Type II secre...    39   0.46 

>tr|B2HK54|B2HK54_MYCMM Tax_Id=216594 SubName: Full=Conserved
           hypothetical membrane protein;[Mycobacterium marinum]
          Length = 267

 Score =  160 bits (406), Expect = 1e-37
 Identities = 105/247 (42%), Positives = 105/247 (42%)

Query: 21  PVRRRISVNDVRGHSNWLSATRWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 80
           PVRRRISVNDVRGHSNWLSATRW                                     
Sbjct: 21  PVRRRISVNDVRGHSNWLSATRWLGCLLACALAGAVLVMPLTTVLAAVVVAGTASRRRRR 80

Query: 81  XXXXXXXXXXXXXXXXXLEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLG 140
                            LEILVGELRVGAHPVRAFGVAADETDGP             LG
Sbjct: 81  RLVRARGVREGRALEAALEILVGELRVGAHPVRAFGVAADETDGPVAAAMRGVAAHARLG 140

Query: 141 ADVTGGLXXXXXXSALPSHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVSX 200
           ADVTGGL      SALPSHWERLAVYWQLASDHGLAIATLM            FSAKVS 
Sbjct: 141 ADVTGGLRAAARRSALPSHWERLAVYWQLASDHGLAIATLMRAAQRDVAQRQRFSAKVSA 200

Query: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXSDR 260
                                        P                           SDR
Sbjct: 201 GLAGARASAGILAGLPVLGVVLGQLIGAQPLAFLLGGHLGGWLLVVGLALAAGGLWWSDR 260

Query: 261 ITDRVMP 267
           ITDRVMP
Sbjct: 261 ITDRVMP 267


>tr|A0PV91|A0PV91_MYCUA Tax_Id=362242 SubName: Full=Conserved
           hypothetical membrane protein;[Mycobacterium ulcerans]
          Length = 264

 Score =  159 bits (402), Expect = 3e-37
 Identities = 93/179 (51%), Positives = 94/179 (52%)

Query: 21  PVRRRISVNDVRGHSNWLSATRWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 80
           PVRRRISVNDVRGHSNWLSATRW                                     
Sbjct: 21  PVRRRISVNDVRGHSNWLSATRWLGCLLACALAGAVLVMPLTTVLAVAVVAGTASRRRRR 80

Query: 81  XXXXXXXXXXXXXXXXXLEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLG 140
                            LEILVGELRVGAHPVRAFGVAADETDGP             LG
Sbjct: 81  RLVRARGVREGWALEAALEILVGELRVGAHPVRAFGVAADETDGPVAAAMRGVAAHARLG 140

Query: 141 ADVTGGLXXXXXXSALPSHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           ADVTGGL      SALP+HWERLAVYWQLASDHGLAIATLM            FSAKVS
Sbjct: 141 ADVTGGLRAAARRSALPAHWERLAVYWQLASDHGLAIATLMRAAQRDVAQRQRFSAKVS 199


>tr|Q7TW05|Q7TW05_MYCBO Tax_Id=1765 SubName: Full=PROBABLE CONSERVED
           TRANSMEMBRANE PROTEIN;[Mycobacterium bovis]
          Length = 266

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/102 (56%), Positives = 65/102 (63%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE++VGELR GAHPVRAF +AADET GP             LGADVT GL      SALP
Sbjct: 97  LELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALP 156

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           ++WERLAV WQL SDHGLAIA+LM            FSA+VS
Sbjct: 157 AYWERLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVS 198


>tr|O69626|O69626_MYCTU Tax_Id=1773 SubName: Full=PROBABLE CONSERVED
           TRANSMEMBRANE PROTEIN; SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis]
          Length = 266

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/102 (56%), Positives = 65/102 (63%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE++VGELR GAHPVRAF +AADET GP             LGADVT GL      SALP
Sbjct: 97  LELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALP 156

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           ++WERLAV WQL SDHGLAIA+LM            FSA+VS
Sbjct: 157 AYWERLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVS 198


>tr|C6DMW0|C6DMW0_MYCTK Tax_Id=478434 SubName: Full=Conserved
           membrane protein;[Mycobacterium tuberculosis]
          Length = 266

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/102 (56%), Positives = 65/102 (63%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE++VGELR GAHPVRAF +AADET GP             LGADVT GL      SALP
Sbjct: 97  LELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALP 156

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           ++WERLAV WQL SDHGLAIA+LM            FSA+VS
Sbjct: 157 AYWERLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVS 198


>tr|C1AIB0|C1AIB0_MYCBT Tax_Id=561275 SubName: Full=Putative
           transmembrane protein;[Mycobacterium bovis]
          Length = 266

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/102 (56%), Positives = 65/102 (63%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE++VGELR GAHPVRAF +AADET GP             LGADVT GL      SALP
Sbjct: 97  LELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALP 156

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           ++WERLAV WQL SDHGLAIA+LM            FSA+VS
Sbjct: 157 AYWERLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVS 198


>tr|A5U8Y1|A5U8Y1_MYCTA Tax_Id=419947 SubName: Full=Putative
           conserved transmembrane protein;[Mycobacterium
           tuberculosis]
          Length = 266

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/102 (56%), Positives = 65/102 (63%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE++VGELR GAHPVRAF +AADET GP             LGADVT GL      SALP
Sbjct: 97  LELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALP 156

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           ++WERLAV WQL SDHGLAIA+LM            FSA+VS
Sbjct: 157 AYWERLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVS 198


>tr|A1KPY7|A1KPY7_MYCBP Tax_Id=410289 SubName: Full=Probable
           conserved transmembrane protein;[Mycobacterium bovis]
          Length = 266

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/102 (56%), Positives = 65/102 (63%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE++VGELR GAHPVRAF +AADET GP             LGADVT GL      SALP
Sbjct: 97  LELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALP 156

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           ++WERLAV WQL SDHGLAIA+LM            FSA+VS
Sbjct: 157 AYWERLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVS 198


>tr|A5WTM4|A5WTM4_MYCTF Tax_Id=336982 SubName: Full=Conserved
           transmembrane protein;[Mycobacterium tuberculosis]
          Length = 266

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/102 (56%), Positives = 65/102 (63%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE++VGELR GAHPVRAF +AADET GP             LGADVT GL      SALP
Sbjct: 97  LELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALP 156

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           ++WERLAV WQL SDHGLAIA+LM            FSA+VS
Sbjct: 157 AYWERLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVS 198


>tr|A2VM41|A2VM41_MYCTU Tax_Id=348776 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium tuberculosis C]
          Length = 266

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/102 (56%), Positives = 65/102 (63%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE++VGELR GAHPVRAF +AADET GP             LGADVT GL      SALP
Sbjct: 97  LELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGLLAAARSSALP 156

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           ++WERLAV WQL SDHGLAIA+LM            FSA+VS
Sbjct: 157 AYWERLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSARVS 198


>tr|Q744C4|Q744C4_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 267

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/102 (51%), Positives = 60/102 (58%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           L++LVGELR G+HPVRAF VAA ET GP             LGADV  GL      SA P
Sbjct: 98  LDVLVGELRAGSHPVRAFDVAAGETAGPVAVALRSVAARARLGADVAAGLAAASRSSARP 157

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
            HW+RLA+ W+LA DHGL IATLM            FSA+VS
Sbjct: 158 EHWQRLALCWRLAGDHGLGIATLMRAAQRDIAERQRFSARVS 199


>tr|A0QA52|A0QA52_MYCA1 Tax_Id=243243 SubName: Full=Bacterial type
           II secretion system protein F domain;[Mycobacterium
           avium]
          Length = 267

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/102 (51%), Positives = 60/102 (58%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           L++LVGELR G+HPVRAF VAA ET GP             LGADV  GL      SA P
Sbjct: 98  LDVLVGELRAGSHPVRAFDVAAGETAGPVAVALRSVAARARLGADVAAGLAAASRGSARP 157

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
            HW+RLA+ W+LA DHGL IATLM            FSA+VS
Sbjct: 158 EHWQRLALCWRLAGDHGLGIATLMRAAQRDIAERQRFSARVS 199


>tr|A0R5F0|A0R5F0_MYCS2 Tax_Id=246196 SubName: Full=Bacterial type
           II secretion system protein F domain;[Mycobacterium
           smegmatis]
          Length = 210

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/101 (50%), Positives = 58/101 (57%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           L++LVGELRVGAHPV AFG AA E+ GP             LGADV  GL      S LP
Sbjct: 41  LDVLVGELRVGAHPVDAFGAAAGESGGPVAEGMRAVAARARLGADVAAGLDDVARASQLP 100

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKV 198
            HW+RLAV W+LA  HGLA+ TLM            FSA+V
Sbjct: 101 GHWQRLAVCWRLAQTHGLALGTLMRAAHEDIVERERFSARV 141


>tr|A3Q728|A3Q728_MYCSJ Tax_Id=164757 SubName: Full=Type II
           secretion system protein;[Mycobacterium sp.]
          Length = 262

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 50/102 (49%), Positives = 57/102 (55%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE+LVGELRVGAHPV AF  AA E DG              LGADV  GL      S+L 
Sbjct: 93  LEVLVGELRVGAHPVAAFETAAGEIDGQVADSLRAVAARARLGADVAAGLHDTARKSSLA 152

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           S W+R+AV WQLA  HGL+IA LM            FS++VS
Sbjct: 153 SQWDRIAVCWQLAQTHGLSIAALMQTAQRDIAERQRFSSRVS 194


>tr|Q1B2H6|Q1B2H6_MYCSS Tax_Id=164756 SubName: Full=Type II
           secretion system protein;[Mycobacterium sp.]
          Length = 262

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 49/102 (48%), Positives = 56/102 (54%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE+LVGELRVGAHPV AF  AA E DG              LGADV  GL      S+L 
Sbjct: 93  LEVLVGELRVGAHPVAAFETAAGEIDGQVSDSLRAVAARARLGADVAAGLHDTGRKSSLA 152

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           S W+R+AV WQLA  HGL+IA LM            FS++ S
Sbjct: 153 SQWDRIAVCWQLAQTHGLSIAALMQTAQRDIAERQRFSSRAS 194


>tr|A1UMM2|A1UMM2_MYCSK Tax_Id=189918 SubName: Full=Type II
           secretion system protein;[Mycobacterium sp.]
          Length = 262

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 49/102 (48%), Positives = 56/102 (54%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE+LVGELRVGAHPV AF  AA E DG              LGADV  GL      S+L 
Sbjct: 93  LEVLVGELRVGAHPVAAFETAAGEIDGQVSDSLRAVAARARLGADVAAGLHDTGRKSSLA 152

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
           S W+R+AV WQLA  HGL+IA LM            FS++ S
Sbjct: 153 SQWDRIAVCWQLAQTHGLSIAALMQTAQRDIAERQRFSSRAS 194


>tr|A1TG77|A1TG77_MYCVP Tax_Id=350058 SubName: Full=Type II
           secretion system protein; Flags:
           Precursor;[Mycobacterium vanbaalenii]
          Length = 260

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 44/84 (52%), Positives = 49/84 (58%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           L++L+GELRVGAHPV A   AA E+D               LGADV  GL      S LP
Sbjct: 91  LDVLIGELRVGAHPVAAMNTAAQESDARIAGALGAVAARALLGADVAAGLRAQGRRSLLP 150

Query: 158 SHWERLAVYWQLASDHGLAIATLM 181
            HW+RLAV W LA   GLAIATLM
Sbjct: 151 GHWDRLAVCWHLAQAQGLAIATLM 174


>tr|A4T5S2|A4T5S2_MYCGI Tax_Id=350054 SubName: Full=Type II
           secretion system protein; Flags:
           Precursor;[Mycobacterium gilvum]
          Length = 261

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/84 (53%), Positives = 48/84 (57%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           L++LVGELRVGAHPV A  VA  E  G              LGADV  GL      S  P
Sbjct: 92  LDVLVGELRVGAHPVAAITVAGHEARGRIAESLNAVAARALLGADVPAGLRAEGRRSPSP 151

Query: 158 SHWERLAVYWQLASDHGLAIATLM 181
            HW+RLAV WQLA  HGLAIA LM
Sbjct: 152 GHWDRLAVCWQLAQTHGLAIAALM 175


>tr|B1MGN6|B1MGN6_MYCA9 Tax_Id=561007 SubName: Full=Conserved
           hypothetical transmembrane protein;[Mycobacterium
           abscessus]
          Length = 258

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/102 (37%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           L+++VGELRVGAHPVRAF +AA E +G              LG +V   L       A  
Sbjct: 92  LDVVVGELRVGAHPVRAFEIAAVELNGAAGEAFAAIAARARLGVNVDRALPRSVPARA-- 149

Query: 158 SHWERLAVYWQLASDHGLAIATLMXXXXXXXXXXXXFSAKVS 199
             W R+   W LA  HGLA+A L+            F+A+V+
Sbjct: 150 -QWNRITRSWSLAQRHGLAVADLLDACRADLQERQQFTARVN 190


>tr|Q5Z2Y9|Q5Z2Y9_NOCFA Tax_Id=37329 SubName: Full=Putative
           uncharacterized protein;[Nocardia farcinica]
          Length = 261

 Score = 51.6 bits (122), Expect = 9e-05
 Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE ++GELRVGAHP  A  VAA E+ G              LG     GL      S + 
Sbjct: 94  LEAVIGELRVGAHPSAAAEVAARESAGAAARAFAVSAARGRLGGSGADGL--RDEQSMIG 151

Query: 158 SHWERLAVYWQLASDHGLAIATLM 181
           +   R+A  WQ+A  HGLA+A L+
Sbjct: 152 AELARIADAWQVAERHGLALAELL 175


>tr|Q0S8K5|Q0S8K5_RHOSR Tax_Id=101510 SubName: Full=Putative
           uncharacterized protein;[Rhodococcus sp.]
          Length = 263

 Score = 48.9 bits (115), Expect = 6e-04
 Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE++  ELRVGAHP  A   AADE+ G              LG     G       S + 
Sbjct: 96  LEVVTAELRVGAHPAAACQTAADESAGSVAAAFRAASARSRLGGSAADGF--RITDSRVG 153

Query: 158 SHWERLAVYWQLASDHGLAIATLM 181
           +   R+A  W +A  HGLA+A L+
Sbjct: 154 TELGRIADIWAVADAHGLALAELL 177


>tr|C1B9Z5|C1B9Z5_RHOOB Tax_Id=632772 SubName: Full=Hypothetical
           membrane protein;[Rhodococcus opacus]
          Length = 263

 Score = 48.9 bits (115), Expect = 6e-04
 Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE++  ELRVGAHP  A   AADE+ G              LG     G       S + 
Sbjct: 96  LEVVTAELRVGAHPAAACQTAADESVGSVSAAFRAASARSRLGGSAADGF--RITGSGVG 153

Query: 158 SHWERLAVYWQLASDHGLAIATLM 181
           +   R+A  W +A  HGLA+A L+
Sbjct: 154 TELGRIADIWAVADAHGLALAELL 177


>tr|C0ZNG1|C0ZNG1_RHOE4 Tax_Id=234621 SubName: Full=Conserved
           hypothetical membrane protein;[Rhodococcus erythropolis]
          Length = 262

 Score = 48.1 bits (113), Expect = 0.001
 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE+L+ EL VGAHP  A  VA +E  G              LG             S + 
Sbjct: 95  LEVLIAELSVGAHPAVASSVAGEECSGEVSAVFRSAGARARLGGSAAAAF--AVPDSCIE 152

Query: 158 SHWERLAVYWQLASDHGLAIATLM 181
             + R+   W++A  HGLA+A L+
Sbjct: 153 REFSRIGSVWRVADQHGLALAELL 176


>tr|C3JWG1|C3JWG1_RHOER Tax_Id=596309 SubName: Full=Bacterial type
           II secretion system protein F domain
           protein;[Rhodococcus erythropolis SK121]
          Length = 262

 Score = 47.8 bits (112), Expect = 0.001
 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 98  LEILVGELRVGAHPVRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSALP 157
           LE+L+ EL VGAHP  A  VA +E  G              LG             S + 
Sbjct: 95  LEVLIAELSVGAHPAAASSVAGEECIGEVSAVFRSAGARARLGGSAAAAF--AVPDSCIE 152

Query: 158 SHWERLAVYWQLASDHGLAIATLM 181
             + R+   W++A  HGLA+A L+
Sbjct: 153 REFSRIGSVWRVADQHGLALAELL 176


>tr|C2AJU5|C2AJU5_TSUPA Tax_Id=521096 SubName: Full=Flp pilus
           assembly protein TadB;[Tsukamurella paurometabola DSM
           20162]
          Length = 269

 Score = 45.4 bits (106), Expect = 0.006
 Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 98  LEILVGELRVGAHPVRAFGVAA-DETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSAL 156
           ++ +V EL VGAHP  A   A  D  D               LG DV  GL      S  
Sbjct: 93  VDAMVAELSVGAHPAAACATAGRDAEDSHVRSVFAEMAGRAELGGDVAAGLRLHASESTA 152

Query: 157 PSHWERLAVYWQLASDHGLAIATLM 181
              WERLA  W+  + HG+ +  L+
Sbjct: 153 ---WERLAAAWETGTRHGIGMGELL 174


>tr|A4F6P2|A4F6P2_SACEN Tax_Id=405948 SubName: Full=Type II
           secretion system protein;[Saccharopolyspora erythraea]
          Length = 267

 Score = 39.3 bits (90), Expect = 0.46
 Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 98  LEILVGELRVGAHP-VRAFGVAADETDGPXXXXXXXXXXXXXLGADVTGGLXXXXXXSAL 156
           + +LV  LR GAHP V A G AAD                  LG D+   L      + L
Sbjct: 97  IRLLVAGLRAGAHPAVAAEGAAADSAPA-ISGVFRDLASAAKLGGDIPTVLDNGGHPAEL 155

Query: 157 PSHWERLAVYWQLASDHGLAIATLM 181
                RL   W+LA  HG+A+A L+
Sbjct: 156 RQPLARLGRAWRLAERHGVALADLL 180


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.320    0.135    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 707,351,936
Number of extensions: 13520964
Number of successful extensions: 15812
Number of sequences better than 10.0: 26
Number of HSP's gapped: 15809
Number of HSP's successfully gapped: 28
Length of query: 267
Length of database: 3,846,993,858
Length adjustment: 135
Effective length of query: 132
Effective length of database: 2,324,841,453
Effective search space: 306879071796
Effective search space used: 306879071796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)