BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_5218 (145 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HKC6|B2HKC6_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 59 2e-07 tr|A0PVE0|A0PVE0_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 59 2e-07 tr|Q8VIV1|Q8VIV1_MYCTU Tax_Id=1773 SubName: Full=CONSERVED HYPOT... 45 0.003 tr|Q7TVV9|Q7TVV9_MYCBO Tax_Id=1765 SubName: Full=CONSERVED HYPOT... 45 0.003 tr|C6DNE5|C6DNE5_MYCTK Tax_Id=478434 SubName: Full=Conserved pro... 45 0.003 tr|C1AIF9|C1AIF9_MYCBT Tax_Id=561275 SubName: Full=Hypothetical ... 45 0.003 tr|A5U931|A5U931_MYCTA Tax_Id=419947 SubName: Full=Conserved hyp... 45 0.003 tr|A1KQ37|A1KQ37_MYCBP Tax_Id=410289 SubName: Full=Conserved hyp... 45 0.003 tr|A5WTS3|A5WTS3_MYCTF Tax_Id=336982 SubName: Full=Conserved pro... 45 0.003 tr|A4KMH3|A4KMH3_MYCTU Tax_Id=395095 SubName: Full=Conserved hyp... 45 0.003 tr|A2VM88|A2VM88_MYCTU Tax_Id=348776 SubName: Full=Conserved hyp... 45 0.003 tr|A0Q9U4|A0Q9U4_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 43 0.010 tr|Q744N3|Q744N3_MYCPA Tax_Id=1770 SubName: Full=Putative unchar... 38 0.41 tr|A0Q9U3|A0Q9U3_MYCA1 Tax_Id=243243 SubName: Full=Putative unch... 38 0.41 tr|B2HKC7|B2HKC7_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp... 37 0.54 tr|A0PVE1|A0PVE1_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp... 37 0.54 tr|A4TG92|A4TG92_MYCGI Tax_Id=350054 SubName: Full=Putative unch... 34 5.9 tr|A1T2E7|A1T2E7_MYCVP Tax_Id=350058 SubName: Full=Putative unch... 34 5.9 tr|Q1B294|Q1B294_MYCSS Tax_Id=164756 SubName: Full=Putative unch... 33 7.8 tr|A3Q790|A3Q790_MYCSJ Tax_Id=164757 SubName: Full=Putative unch... 33 7.8 tr|A1UMV6|A1UMV6_MYCSK Tax_Id=189918 SubName: Full=Putative unch... 33 7.8 >tr|B2HKC6|B2HKC6_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical proline rich protein;[Mycobacterium marinum] Length = 145 Score = 58.9 bits (141), Expect = 2e-07 Identities = 29/29 (100%), Positives = 29/29 (100%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALVF 59 LYRVAAWVVIVAGITFIASTLFFAGALVF Sbjct: 31 LYRVAAWVVIVAGITFIASTLFFAGALVF 59 >tr|A0PVE0|A0PVE0_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical proline rich protein;[Mycobacterium ulcerans] Length = 124 Score = 58.9 bits (141), Expect = 2e-07 Identities = 29/29 (100%), Positives = 29/29 (100%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALVF 59 LYRVAAWVVIVAGITFIASTLFFAGALVF Sbjct: 7 LYRVAAWVVIVAGITFIASTLFFAGALVF 35 >tr|Q8VIV1|Q8VIV1_MYCTU Tax_Id=1773 SubName: Full=CONSERVED HYPOTHETICAL PROLINE RICH PROTEIN; SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 129 Score = 44.7 bits (104), Expect = 0.003 Identities = 20/28 (71%), Positives = 23/28 (82%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 LYR AAWVVIVAGI F + +FF+GALV Sbjct: 31 LYRAAAWVVIVAGIVFTVAVIFFSGALV 58 >tr|Q7TVV9|Q7TVV9_MYCBO Tax_Id=1765 SubName: Full=CONSERVED HYPOTHETICAL PROLINE RICH PROTEIN;[Mycobacterium bovis] Length = 129 Score = 44.7 bits (104), Expect = 0.003 Identities = 20/28 (71%), Positives = 23/28 (82%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 LYR AAWVVIVAGI F + +FF+GALV Sbjct: 31 LYRAAAWVVIVAGIVFTVAVIFFSGALV 58 >tr|C6DNE5|C6DNE5_MYCTK Tax_Id=478434 SubName: Full=Conserved proline rich protein;[Mycobacterium tuberculosis] Length = 129 Score = 44.7 bits (104), Expect = 0.003 Identities = 20/28 (71%), Positives = 23/28 (82%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 LYR AAWVVIVAGI F + +FF+GALV Sbjct: 31 LYRAAAWVVIVAGIVFTVAVIFFSGALV 58 >tr|C1AIF9|C1AIF9_MYCBT Tax_Id=561275 SubName: Full=Hypothetical proline rich protein;[Mycobacterium bovis] Length = 129 Score = 44.7 bits (104), Expect = 0.003 Identities = 20/28 (71%), Positives = 23/28 (82%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 LYR AAWVVIVAGI F + +FF+GALV Sbjct: 31 LYRAAAWVVIVAGIVFTVAVIFFSGALV 58 >tr|A5U931|A5U931_MYCTA Tax_Id=419947 SubName: Full=Conserved hypothetical proline rich protein;[Mycobacterium tuberculosis] Length = 129 Score = 44.7 bits (104), Expect = 0.003 Identities = 20/28 (71%), Positives = 23/28 (82%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 LYR AAWVVIVAGI F + +FF+GALV Sbjct: 31 LYRAAAWVVIVAGIVFTVAVIFFSGALV 58 >tr|A1KQ37|A1KQ37_MYCBP Tax_Id=410289 SubName: Full=Conserved hypothetical proline rich protein;[Mycobacterium bovis] Length = 129 Score = 44.7 bits (104), Expect = 0.003 Identities = 20/28 (71%), Positives = 23/28 (82%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 LYR AAWVVIVAGI F + +FF+GALV Sbjct: 31 LYRAAAWVVIVAGIVFTVAVIFFSGALV 58 >tr|A5WTS3|A5WTS3_MYCTF Tax_Id=336982 SubName: Full=Conserved proline rich protein;[Mycobacterium tuberculosis] Length = 129 Score = 44.7 bits (104), Expect = 0.003 Identities = 20/28 (71%), Positives = 23/28 (82%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 LYR AAWVVIVAGI F + +FF+GALV Sbjct: 31 LYRAAAWVVIVAGIVFTVAVIFFSGALV 58 >tr|A4KMH3|A4KMH3_MYCTU Tax_Id=395095 SubName: Full=Conserved hypothetical proline rich protein;[Mycobacterium tuberculosis str. Haarlem] Length = 129 Score = 44.7 bits (104), Expect = 0.003 Identities = 20/28 (71%), Positives = 23/28 (82%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 LYR AAWVVIVAGI F + +FF+GALV Sbjct: 31 LYRAAAWVVIVAGIVFTVAVIFFSGALV 58 >tr|A2VM88|A2VM88_MYCTU Tax_Id=348776 SubName: Full=Conserved hypothetical proline rich protein;[Mycobacterium tuberculosis C] Length = 129 Score = 44.7 bits (104), Expect = 0.003 Identities = 20/28 (71%), Positives = 23/28 (82%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 LYR AAWVVIVAGI F + +FF+GALV Sbjct: 31 LYRAAAWVVIVAGIVFTVAVIFFSGALV 58 >tr|A0Q9U4|A0Q9U4_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 172 Score = 43.1 bits (100), Expect = 0.010 Identities = 19/29 (65%), Positives = 23/29 (79%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALVF 59 LY AAWVVIVAGI FI S++FF GA ++ Sbjct: 37 LYTAAAWVVIVAGIVFIISSVFFVGAFIW 65 >tr|Q744N3|Q744N3_MYCPA Tax_Id=1770 SubName: Full=Putative uncharacterized protein;[Mycobacterium paratuberculosis] Length = 181 Score = 37.7 bits (86), Expect = 0.41 Identities = 15/28 (53%), Positives = 22/28 (78%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 +++VAAWV IVAGI FI + +FF G ++ Sbjct: 59 VFQVAAWVAIVAGIVFIVAVIFFTGFIL 86 >tr|A0Q9U3|A0Q9U3_MYCA1 Tax_Id=243243 SubName: Full=Putative uncharacterized protein;[Mycobacterium avium] Length = 144 Score = 37.7 bits (86), Expect = 0.41 Identities = 15/28 (53%), Positives = 22/28 (78%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 +++VAAWV IVAGI FI + +FF G ++ Sbjct: 22 VFQVAAWVAIVAGIVFIVAVIFFTGFIL 49 >tr|B2HKC7|B2HKC7_MYCMM Tax_Id=216594 SubName: Full=Conserved hypothetical proline rich protein;[Mycobacterium marinum] Length = 115 Score = 37.4 bits (85), Expect = 0.54 Identities = 15/25 (60%), Positives = 19/25 (76%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAG 55 +++ AAWV IVAGI FI S +FF G Sbjct: 29 VFKAAAWVAIVAGIVFIVSVIFFTG 53 >tr|A0PVE1|A0PVE1_MYCUA Tax_Id=362242 SubName: Full=Conserved hypothetical proline rich protein;[Mycobacterium ulcerans] Length = 115 Score = 37.4 bits (85), Expect = 0.54 Identities = 15/25 (60%), Positives = 19/25 (76%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAG 55 +++ AAWV IVAGI FI S +FF G Sbjct: 29 VFKAAAWVAIVAGIVFIVSVIFFTG 53 >tr|A4TG92|A4TG92_MYCGI Tax_Id=350054 SubName: Full=Putative uncharacterized protein;[Mycobacterium gilvum] Length = 158 Score = 33.9 bits (76), Expect = 5.9 Identities = 15/28 (53%), Positives = 20/28 (71%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 L + AAWV IVAG+ FI + +FF+G V Sbjct: 33 LTQSAAWVGIVAGVVFIVAVIFFSGFFV 60 >tr|A1T2E7|A1T2E7_MYCVP Tax_Id=350058 SubName: Full=Putative uncharacterized protein;[Mycobacterium vanbaalenii] Length = 158 Score = 33.9 bits (76), Expect = 5.9 Identities = 15/28 (53%), Positives = 20/28 (71%) Query: 31 LYRVAAWVVIVAGITFIASTLFFAGALV 58 L + AAWV IVAG+ FI + +FF+G V Sbjct: 33 LTQSAAWVGIVAGVVFIVAVIFFSGFFV 60 >tr|Q1B294|Q1B294_MYCSS Tax_Id=164756 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 144 Score = 33.5 bits (75), Expect = 7.8 Identities = 13/22 (59%), Positives = 18/22 (81%) Query: 34 VAAWVVIVAGITFIASTLFFAG 55 +AAWV IVAG+ FI + +FF+G Sbjct: 49 IAAWVGIVAGVVFIVAVVFFSG 70 >tr|A3Q790|A3Q790_MYCSJ Tax_Id=164757 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 144 Score = 33.5 bits (75), Expect = 7.8 Identities = 13/22 (59%), Positives = 18/22 (81%) Query: 34 VAAWVVIVAGITFIASTLFFAG 55 +AAWV IVAG+ FI + +FF+G Sbjct: 49 IAAWVGIVAGVVFIVAVVFFSG 70 >tr|A1UMV6|A1UMV6_MYCSK Tax_Id=189918 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 144 Score = 33.5 bits (75), Expect = 7.8 Identities = 13/22 (59%), Positives = 18/22 (81%) Query: 34 VAAWVVIVAGITFIASTLFFAG 55 +AAWV IVAG+ FI + +FF+G Sbjct: 49 IAAWVGIVAGVVFIVAVVFFSG 70 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.334 0.141 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 208,394,299 Number of extensions: 2190660 Number of successful extensions: 18838 Number of sequences better than 10.0: 21 Number of HSP's gapped: 18842 Number of HSP's successfully gapped: 21 Length of query: 145 Length of database: 3,846,993,858 Length adjustment: 109 Effective length of query: 36 Effective length of database: 2,617,996,731 Effective search space: 94247882316 Effective search space used: 94247882316 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.6 bits) S2: 75 (33.5 bits)