BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_5219
         (115 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HKC7|B2HKC7_MYCMM Tax_Id=216594 SubName: Full=Conserved hyp...    51   4e-05
tr|A0PVE1|A0PVE1_MYCUA Tax_Id=362242 SubName: Full=Conserved hyp...    49   2e-04

>tr|B2HKC7|B2HKC7_MYCMM Tax_Id=216594 SubName: Full=Conserved
           hypothetical proline rich protein;[Mycobacterium
           marinum]
          Length = 115

 Score = 51.2 bits (121), Expect = 4e-05
 Identities = 33/93 (35%), Positives = 33/93 (35%)

Query: 23  QHQTPKXXXXXXXXXXXXXXXXXXXXXXXTGFRLXXXXXXXXXXXXXXXXXXPAMMLRPG 82
           QHQTPK                       TGFRL                  PAMMLRPG
Sbjct: 23  QHQTPKVFKAAAWVAIVAGIVFIVSVIFFTGFRLGMHSGHGGFHRGHHHKHHPAMMLRPG 82

Query: 83  MHHXXXXXXXXXXXXXXXXXXXTSVAPSTTPGR 115
           MHH                   TSVAPSTTPGR
Sbjct: 83  MHHGGAPAVSPGSGPGGPGEVPTSVAPSTTPGR 115


>tr|A0PVE1|A0PVE1_MYCUA Tax_Id=362242 SubName: Full=Conserved
           hypothetical proline rich protein;[Mycobacterium
           ulcerans]
          Length = 115

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 32/93 (34%), Positives = 32/93 (34%)

Query: 23  QHQTPKXXXXXXXXXXXXXXXXXXXXXXXTGFRLXXXXXXXXXXXXXXXXXXPAMMLRPG 82
           QH TPK                       TGFRL                  PAMMLRPG
Sbjct: 23  QHLTPKVFKAAAWVAIVAGIVFIVSVIFFTGFRLGMHSGHGGFHRGHHHKHHPAMMLRPG 82

Query: 83  MHHXXXXXXXXXXXXXXXXXXXTSVAPSTTPGR 115
           MHH                   TSVAPSTTPGR
Sbjct: 83  MHHGGAPAVSPGSGPGGPGEVPTSVAPSTTPGR 115


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.321    0.130    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 229,685,024
Number of extensions: 2136028
Number of successful extensions: 171
Number of sequences better than 10.0: 2
Number of HSP's gapped: 178
Number of HSP's successfully gapped: 2
Length of query: 115
Length of database: 3,846,993,858
Length adjustment: 82
Effective length of query: 33
Effective length of database: 2,922,427,212
Effective search space: 96440097996
Effective search space used: 96440097996
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)