BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_5276 (339 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HLE8|B2HLE8_MYCMM Tax_Id=216594 SubName: Full=Transcription... 581 e-164 tr|A0PVI3|A0PVI3_MYCUA Tax_Id=362242 SubName: Full=Transcription... 573 e-162 tr|Q7TVT5|Q7TVT5_MYCBO Tax_Id=1765 SubName: Full=TRANSCRIPTIONAL... 432 e-119 tr|O69703|O69703_MYCTU Tax_Id=1773 SubName: Full=TRANSCRIPTIONAL... 432 e-119 tr|C6DNH7|C6DNH7_MYCTK Tax_Id=478434 SubName: Full=Transcription... 432 e-119 tr|A5U963|A5U963_MYCTA Tax_Id=419947 SubName: Full=AraC/XylS-fam... 432 e-119 tr|A5WTV4|A5WTV4_MYCTF Tax_Id=336982 SubName: Full=Transcription... 432 e-119 tr|A4KMK3|A4KMK3_MYCTU Tax_Id=395095 SubName: Full=Transcription... 432 e-119 tr|A2VMB6|A2VMB6_MYCTU Tax_Id=348776 SubName: Full=Transcription... 432 e-119 tr|C1AIJ0|C1AIJ0_MYCBT Tax_Id=561275 SubName: Full=Transcription... 431 e-119 tr|A1KQ68|A1KQ68_MYCBP Tax_Id=410289 SubName: Full=Transcription... 431 e-119 tr|B2HHP8|B2HHP8_MYCMM Tax_Id=216594 SubName: Full=Transcription... 311 6e-83 tr|B1MHJ0|B1MHJ0_MYCA9 Tax_Id=561007 SubName: Full=Probable tran... 259 4e-67 tr|A4TFY2|A4TFY2_MYCGI Tax_Id=350054 SubName: Full=Transcription... 221 1e-55 sp|Q06861|VIRS_MYCTU Tax_Id=1773 (virS)RecName: Full=Putative vi... 153 3e-35 tr|C6DVH6|C6DVH6_MYCTK Tax_Id=478434 SubName: Full=AraC/xylS-fam... 153 3e-35 tr|A5U797|A5U797_MYCTA Tax_Id=419947 (virS)SubName: Full=AraC/Xy... 153 3e-35 tr|A5WRY7|A5WRY7_MYCTF Tax_Id=336982 SubName: Full=Virulence-reg... 153 3e-35 tr|A2VNP3|A2VNP3_MYCTU Tax_Id=348776 SubName: Full=Virulence-reg... 153 3e-35 tr|C1B9S8|C1B9S8_RHOOB Tax_Id=632772 SubName: Full=Putative AraC... 152 4e-35 tr|Q7TXA7|Q7TXA7_MYCBO Tax_Id=1765 (virS)SubName: Full=VIRULENCE... 150 3e-34 tr|C1AGK1|C1AGK1_MYCBT Tax_Id=561275 (virS)SubName: Full=Virulen... 150 3e-34 tr|A1KN80|A1KN80_MYCBP Tax_Id=410289 (virS)SubName: Full=Virulen... 150 3e-34 tr|Q5Z0R8|Q5Z0R8_NOCFA Tax_Id=37329 SubName: Full=Putative trans... 144 2e-32 tr|Q397P9|Q397P9_BURS3 Tax_Id=269483 SubName: Full=Transcription... 134 1e-29 tr|A0XXY8|A0XXY8_9GAMM Tax_Id=156578 SubName: Full=Putative tran... 134 1e-29 tr|B9AYR7|B9AYR7_9BURK Tax_Id=513051 SubName: Full=Transcription... 134 2e-29 tr|A9ANL1|A9ANL1_BURM1 Tax_Id=395019 SubName: Full=AraC family t... 134 2e-29 tr|B7X5G2|B7X5G2_COMTE Tax_Id=399795 SubName: Full=Transcription... 130 2e-28 tr|Q46QT2|Q46QT2_RALEJ Tax_Id=264198 SubName: Full=Transcription... 130 2e-28 tr|Q3IDB3|Q3IDB3_PSEHT Tax_Id=326442 SubName: Full=Putative tran... 128 9e-28 tr|Q1LCN8|Q1LCN8_RALME Tax_Id=266264 SubName: Full=Transcription... 125 1e-26 tr|A4FHN9|A4FHN9_SACEN Tax_Id=405948 SubName: Full=Putative tran... 124 1e-26 tr|A1WHE5|A1WHE5_VEREI Tax_Id=391735 SubName: Full=Transcription... 121 1e-25 tr|A3TS21|A3TS21_9MICO Tax_Id=313589 SubName: Full=Putative tran... 121 1e-25 tr|B0KFL7|B0KFL7_PSEPG Tax_Id=76869 SubName: Full=Transcriptiona... 120 3e-25 tr|D0IUT8|D0IUT8_COMTE Tax_Id=688245 SubName: Full=Transcription... 119 5e-25 tr|A8GAZ0|A8GAZ0_SERP5 Tax_Id=399741 SubName: Full=Transcription... 119 7e-25 tr|B7WRD8|B7WRD8_COMTE Tax_Id=399795 SubName: Full=Transcription... 117 2e-24 tr|Q46R37|Q46R37_RALEJ Tax_Id=264198 SubName: Full=Transcription... 117 3e-24 tr|C1B884|C1B884_RHOOB Tax_Id=632772 SubName: Full=Putative AraC... 117 3e-24 tr|A9BT85|A9BT85_DELAS Tax_Id=398578 SubName: Full=Transcription... 117 3e-24 tr|Q1N1S3|Q1N1S3_9GAMM Tax_Id=207949 SubName: Full=Transcription... 115 1e-23 tr|Q0SA49|Q0SA49_RHOSR Tax_Id=101510 SubName: Full=Probable tran... 114 2e-23 tr|Q3KCK3|Q3KCK3_PSEPF Tax_Id=205922 SubName: Full=Putative tran... 111 1e-22 tr|C6BMA1|C6BMA1_RALP1 Tax_Id=428406 SubName: Full=Transcription... 110 2e-22 tr|B2UHA2|B2UHA2_RALPJ Tax_Id=402626 SubName: Full=Transcription... 110 2e-22 tr|Q1LED5|Q1LED5_RALME Tax_Id=266264 SubName: Full=Transcription... 108 7e-22 tr|B0KU45|B0KU45_PSEPG Tax_Id=76869 SubName: Full=Transcriptiona... 108 1e-21 tr|C3JPZ5|C3JPZ5_RHOER Tax_Id=596309 SubName: Full=Transcription... 106 5e-21 >tr|B2HLE8|B2HLE8_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein (Probably AraC/XylS-family);[Mycobacterium marinum] Length = 339 Score = 581 bits (1497), Expect = e-164 Identities = 300/339 (88%), Positives = 300/339 (88%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIP Sbjct: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPVRAVIRAIETAAAAT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 GTHDFGRQLAQRQGIEILGPVG LMIFHTFMAAYSPAIHIEITPLAHTQ Sbjct: 61 GTHDFGRQLAQRQGIEILGPVGVAARTAATVADALMIFHTFMAAYSPAIHIEITPLAHTQ 120 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAV YVRY Sbjct: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVHLPHDPLTPPTTYVRY 180 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL Sbjct: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA Sbjct: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRATPRRR 339 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRATPRRR Sbjct: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRATPRRR 339 >tr|A0PVI3|A0PVI3_MYCUA Tax_Id=362242 SubName: Full=Transcriptional regulatory protein (Probably AraC/XylS-family);[Mycobacterium ulcerans] Length = 339 Score = 573 bits (1478), Expect = e-162 Identities = 297/339 (87%), Positives = 297/339 (87%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIP Sbjct: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPVRAVIRAIETAAAAT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 GTHDFGRQLAQRQGIEILGPVG LMIFHTFMAAYSPAIHIEITPLA TQ Sbjct: 61 GTHDFGRQLAQRQGIEILGPVGVAARTAATVADALMIFHTFMAAYSPAIHIEITPLARTQ 120 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RS VAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAV YVRY Sbjct: 121 RSVVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVHLPHDPLTPPTTYVRY 180 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL Sbjct: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGA TLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA Sbjct: 241 LPTGATTLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRATPRRR 339 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRATPRRR Sbjct: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRATPRRR 339 >tr|Q7TVT5|Q7TVT5_MYCBO Tax_Id=1765 SubName: Full=TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ARAC/XYLS-FAMILY);[Mycobacterium bovis] Length = 353 Score = 432 bits (1111), Expect = e-119 Identities = 224/335 (66%), Positives = 255/335 (76%), Gaps = 1/335 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGT L+NYP+LV+ LGGDPA LLRAAGVR+QDVGNYDAFI Sbjct: 1 MSVVRGTALANYPSLVAGLGGDPATLLRAAGVRDQDVGNYDAFISIRAAIRAIESAAAVT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 T DFGR+LAQRQGIEILGPVG L IF+TFMAAYSP I I ITPLA Q Sbjct: 61 ATMDFGRRLAQRQGIEILGPVGVAARTAATVGDALAIFNTFMAAYSPVIAIRITPLAG-Q 119 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RSF+A+E + D+P P T+ELALGV+LGV RLL+GADY PLAV Y++Y Sbjct: 120 RSFIALEFLLDEPASYPQTMELALGVALGVIRLLLGADYAPLAVHLPHDPLTPEAFYLQY 179 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 F C P+FAER GFT+R+ DL RPL+RD++AHR VVDYLSSITPLG GIVESVRT+ RQL Sbjct: 180 FGCRPYFAERVGGFTMRTADLSRPLNRDDVAHRVVVDYLSSITPLGEGIVESVRTIVRQL 239 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGAATL VVA QFHLHPKTLQRRLA+E+TTF L+D VRK+ ADRYLRTT + L+HLA Sbjct: 240 LPTGAATLNVVAEQFHLHPKTLQRRLAEENTTFVILVDRVRKDVADRYLRTTGIGLTHLA 299 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRAT 335 RELGYAEQSVLTRSCKRWFG GPAAYR + R++ T Sbjct: 300 RELGYAEQSVLTRSCKRWFGTGPAAYRNQARLQTT 334 >tr|O69703|O69703_MYCTU Tax_Id=1773 SubName: Full=TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ARAC/XYLS-FAMILY); SubName: Full=Transcriptional regulator, AraC family;[Mycobacterium tuberculosis] Length = 353 Score = 432 bits (1111), Expect = e-119 Identities = 224/335 (66%), Positives = 255/335 (76%), Gaps = 1/335 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGT L+NYP+LV+ LGGDPA LLRAAGVR+QDVGNYDAFI Sbjct: 1 MSVVRGTALANYPSLVAGLGGDPATLLRAAGVRDQDVGNYDAFISIRAAIRAIESAAAVT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 T DFGR+LAQRQGIEILGPVG L IF+TFMAAYSP I I ITPLA Q Sbjct: 61 ATMDFGRRLAQRQGIEILGPVGVAARTAATVGDALAIFNTFMAAYSPVIAIRITPLAG-Q 119 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RSF+A+E + D+P P T+ELALGV+LGV RLL+GADY PLAV Y++Y Sbjct: 120 RSFIALEFLLDEPASYPQTMELALGVALGVIRLLLGADYAPLAVHLPHDPLTPEAFYLQY 179 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 F C P+FAER GFT+R+ DL RPL+RD++AHR VVDYLSSITPLG GIVESVRT+ RQL Sbjct: 180 FGCRPYFAERVGGFTMRTADLSRPLNRDDVAHRVVVDYLSSITPLGEGIVESVRTIVRQL 239 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGAATL VVA QFHLHPKTLQRRLA+E+TTF L+D VRK+ ADRYLRTT + L+HLA Sbjct: 240 LPTGAATLNVVAEQFHLHPKTLQRRLAEENTTFVILVDRVRKDVADRYLRTTGIGLTHLA 299 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRAT 335 RELGYAEQSVLTRSCKRWFG GPAAYR + R++ T Sbjct: 300 RELGYAEQSVLTRSCKRWFGTGPAAYRNQARLQTT 334 >tr|C6DNH7|C6DNH7_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator, araC/xylS-family;[Mycobacterium tuberculosis] Length = 353 Score = 432 bits (1111), Expect = e-119 Identities = 224/335 (66%), Positives = 255/335 (76%), Gaps = 1/335 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGT L+NYP+LV+ LGGDPA LLRAAGVR+QDVGNYDAFI Sbjct: 1 MSVVRGTALANYPSLVAGLGGDPATLLRAAGVRDQDVGNYDAFISIRAAIRAIESAAAVT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 T DFGR+LAQRQGIEILGPVG L IF+TFMAAYSP I I ITPLA Q Sbjct: 61 ATMDFGRRLAQRQGIEILGPVGVAARTAATVGDALAIFNTFMAAYSPVIAIRITPLAG-Q 119 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RSF+A+E + D+P P T+ELALGV+LGV RLL+GADY PLAV Y++Y Sbjct: 120 RSFIALEFLLDEPASYPQTMELALGVALGVIRLLLGADYAPLAVHLPHDPLTPEAFYLQY 179 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 F C P+FAER GFT+R+ DL RPL+RD++AHR VVDYLSSITPLG GIVESVRT+ RQL Sbjct: 180 FGCRPYFAERVGGFTMRTADLSRPLNRDDVAHRVVVDYLSSITPLGEGIVESVRTIVRQL 239 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGAATL VVA QFHLHPKTLQRRLA+E+TTF L+D VRK+ ADRYLRTT + L+HLA Sbjct: 240 LPTGAATLNVVAEQFHLHPKTLQRRLAEENTTFVILVDRVRKDVADRYLRTTGIGLTHLA 299 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRAT 335 RELGYAEQSVLTRSCKRWFG GPAAYR + R++ T Sbjct: 300 RELGYAEQSVLTRSCKRWFGTGPAAYRNQARLQTT 334 >tr|A5U963|A5U963_MYCTA Tax_Id=419947 SubName: Full=AraC/XylS-family transcriptional regulator;[Mycobacterium tuberculosis] Length = 353 Score = 432 bits (1111), Expect = e-119 Identities = 224/335 (66%), Positives = 255/335 (76%), Gaps = 1/335 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGT L+NYP+LV+ LGGDPA LLRAAGVR+QDVGNYDAFI Sbjct: 1 MSVVRGTALANYPSLVAGLGGDPATLLRAAGVRDQDVGNYDAFISIRAAIRAIESAAAVT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 T DFGR+LAQRQGIEILGPVG L IF+TFMAAYSP I I ITPLA Q Sbjct: 61 ATMDFGRRLAQRQGIEILGPVGVAARTAATVGDALAIFNTFMAAYSPVIAIRITPLAG-Q 119 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RSF+A+E + D+P P T+ELALGV+LGV RLL+GADY PLAV Y++Y Sbjct: 120 RSFIALEFLLDEPASYPQTMELALGVALGVIRLLLGADYAPLAVHLPHDPLTPEAFYLQY 179 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 F C P+FAER GFT+R+ DL RPL+RD++AHR VVDYLSSITPLG GIVESVRT+ RQL Sbjct: 180 FGCRPYFAERVGGFTMRTADLSRPLNRDDVAHRVVVDYLSSITPLGEGIVESVRTIVRQL 239 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGAATL VVA QFHLHPKTLQRRLA+E+TTF L+D VRK+ ADRYLRTT + L+HLA Sbjct: 240 LPTGAATLNVVAEQFHLHPKTLQRRLAEENTTFVILVDRVRKDVADRYLRTTGIGLTHLA 299 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRAT 335 RELGYAEQSVLTRSCKRWFG GPAAYR + R++ T Sbjct: 300 RELGYAEQSVLTRSCKRWFGTGPAAYRNQARLQTT 334 >tr|A5WTV4|A5WTV4_MYCTF Tax_Id=336982 SubName: Full=Transcriptional regulatory protein, araC/xylS-family;[Mycobacterium tuberculosis] Length = 353 Score = 432 bits (1111), Expect = e-119 Identities = 224/335 (66%), Positives = 255/335 (76%), Gaps = 1/335 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGT L+NYP+LV+ LGGDPA LLRAAGVR+QDVGNYDAFI Sbjct: 1 MSVVRGTALANYPSLVAGLGGDPATLLRAAGVRDQDVGNYDAFISIRAAIRAIESAAAVT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 T DFGR+LAQRQGIEILGPVG L IF+TFMAAYSP I I ITPLA Q Sbjct: 61 ATMDFGRRLAQRQGIEILGPVGVAARTAATVGDALAIFNTFMAAYSPVIAIRITPLAG-Q 119 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RSF+A+E + D+P P T+ELALGV+LGV RLL+GADY PLAV Y++Y Sbjct: 120 RSFIALEFLLDEPASYPQTMELALGVALGVIRLLLGADYAPLAVHLPHDPLTPEAFYLQY 179 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 F C P+FAER GFT+R+ DL RPL+RD++AHR VVDYLSSITPLG GIVESVRT+ RQL Sbjct: 180 FGCRPYFAERVGGFTMRTADLSRPLNRDDVAHRVVVDYLSSITPLGEGIVESVRTIVRQL 239 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGAATL VVA QFHLHPKTLQRRLA+E+TTF L+D VRK+ ADRYLRTT + L+HLA Sbjct: 240 LPTGAATLNVVAEQFHLHPKTLQRRLAEENTTFVILVDRVRKDVADRYLRTTGIGLTHLA 299 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRAT 335 RELGYAEQSVLTRSCKRWFG GPAAYR + R++ T Sbjct: 300 RELGYAEQSVLTRSCKRWFGTGPAAYRNQARLQTT 334 >tr|A4KMK3|A4KMK3_MYCTU Tax_Id=395095 SubName: Full=Transcriptional regulatory protein (Probably araC/xylS-family);[Mycobacterium tuberculosis str. Haarlem] Length = 353 Score = 432 bits (1111), Expect = e-119 Identities = 224/335 (66%), Positives = 255/335 (76%), Gaps = 1/335 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGT L+NYP+LV+ LGGDPA LLRAAGVR+QDVGNYDAFI Sbjct: 1 MSVVRGTALANYPSLVAGLGGDPATLLRAAGVRDQDVGNYDAFISIRAAIRAIESAAAVT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 T DFGR+LAQRQGIEILGPVG L IF+TFMAAYSP I I ITPLA Q Sbjct: 61 ATMDFGRRLAQRQGIEILGPVGVAARTAATVGDALAIFNTFMAAYSPVIAIRITPLAG-Q 119 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RSF+A+E + D+P P T+ELALGV+LGV RLL+GADY PLAV Y++Y Sbjct: 120 RSFIALEFLLDEPASYPQTMELALGVALGVIRLLLGADYAPLAVHLPHDPLTPEAFYLQY 179 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 F C P+FAER GFT+R+ DL RPL+RD++AHR VVDYLSSITPLG GIVESVRT+ RQL Sbjct: 180 FGCRPYFAERVGGFTMRTADLSRPLNRDDVAHRVVVDYLSSITPLGEGIVESVRTIVRQL 239 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGAATL VVA QFHLHPKTLQRRLA+E+TTF L+D VRK+ ADRYLRTT + L+HLA Sbjct: 240 LPTGAATLNVVAEQFHLHPKTLQRRLAEENTTFVILVDRVRKDVADRYLRTTGIGLTHLA 299 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRAT 335 RELGYAEQSVLTRSCKRWFG GPAAYR + R++ T Sbjct: 300 RELGYAEQSVLTRSCKRWFGTGPAAYRNQARLQTT 334 >tr|A2VMB6|A2VMB6_MYCTU Tax_Id=348776 SubName: Full=Transcriptional regulatory protein (Probably araC/xylS-family);[Mycobacterium tuberculosis C] Length = 353 Score = 432 bits (1111), Expect = e-119 Identities = 224/335 (66%), Positives = 255/335 (76%), Gaps = 1/335 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGT L+NYP+LV+ LGGDPA LLRAAGVR+QDVGNYDAFI Sbjct: 1 MSVVRGTALANYPSLVAGLGGDPATLLRAAGVRDQDVGNYDAFISIRAAIRAIESAAAVT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 T DFGR+LAQRQGIEILGPVG L IF+TFMAAYSP I I ITPLA Q Sbjct: 61 ATMDFGRRLAQRQGIEILGPVGVAARTAATVGDALAIFNTFMAAYSPVIAIRITPLAG-Q 119 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RSF+A+E + D+P P T+ELALGV+LGV RLL+GADY PLAV Y++Y Sbjct: 120 RSFIALEFLLDEPASYPQTMELALGVALGVIRLLLGADYAPLAVHLPHDPLTPEAFYLQY 179 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 F C P+FAER GFT+R+ DL RPL+RD++AHR VVDYLSSITPLG GIVESVRT+ RQL Sbjct: 180 FGCRPYFAERVGGFTMRTADLSRPLNRDDVAHRVVVDYLSSITPLGEGIVESVRTIVRQL 239 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGAATL VVA QFHLHPKTLQRRLA+E+TTF L+D VRK+ ADRYLRTT + L+HLA Sbjct: 240 LPTGAATLNVVAEQFHLHPKTLQRRLAEENTTFVILVDRVRKDVADRYLRTTGIGLTHLA 299 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRAT 335 RELGYAEQSVLTRSCKRWFG GPAAYR + R++ T Sbjct: 300 RELGYAEQSVLTRSCKRWFGTGPAAYRNQARLQTT 334 >tr|C1AIJ0|C1AIJ0_MYCBT Tax_Id=561275 SubName: Full=Transcriptional regulatory protein;[Mycobacterium bovis] Length = 353 Score = 431 bits (1107), Expect = e-119 Identities = 223/335 (66%), Positives = 255/335 (76%), Gaps = 1/335 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGT L+NYP+LV+ LGGDPA LLRAAGVR+QDVGNYDAFI Sbjct: 1 MSVVRGTALANYPSLVAGLGGDPATLLRAAGVRDQDVGNYDAFISIRAAIRAIESAAAVT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 T DFGR+LAQRQGI+ILGPVG L IF+TFMAAYSP I I ITPLA Q Sbjct: 61 ATMDFGRRLAQRQGIKILGPVGVAARTAATVGDALAIFNTFMAAYSPVIAIRITPLAG-Q 119 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RSF+A+E + D+P P T+ELALGV+LGV RLL+GADY PLAV Y++Y Sbjct: 120 RSFIALEFLLDEPASYPQTMELALGVALGVIRLLLGADYAPLAVHLPHDPLTPEAFYLQY 179 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 F C P+FAER GFT+R+ DL RPL+RD++AHR VVDYLSSITPLG GIVESVRT+ RQL Sbjct: 180 FGCRPYFAERVGGFTMRTADLSRPLNRDDVAHRVVVDYLSSITPLGEGIVESVRTIVRQL 239 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGAATL VVA QFHLHPKTLQRRLA+E+TTF L+D VRK+ ADRYLRTT + L+HLA Sbjct: 240 LPTGAATLNVVAEQFHLHPKTLQRRLAEENTTFVILVDRVRKDVADRYLRTTGIGLTHLA 299 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRAT 335 RELGYAEQSVLTRSCKRWFG GPAAYR + R++ T Sbjct: 300 RELGYAEQSVLTRSCKRWFGTGPAAYRNQARLQTT 334 >tr|A1KQ68|A1KQ68_MYCBP Tax_Id=410289 SubName: Full=Transcriptional regulatory protein (Probably araC/xylS-family);[Mycobacterium bovis] Length = 353 Score = 431 bits (1107), Expect = e-119 Identities = 223/335 (66%), Positives = 255/335 (76%), Gaps = 1/335 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSVVRGT L+NYP+LV+ LGGDPA LLRAAGVR+QDVGNYDAFI Sbjct: 1 MSVVRGTALANYPSLVAGLGGDPATLLRAAGVRDQDVGNYDAFISIRAAIRAIESAAAVT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 T DFGR+LAQRQGI+ILGPVG L IF+TFMAAYSP I I ITPLA Q Sbjct: 61 ATMDFGRRLAQRQGIKILGPVGVAARTAATVGDALAIFNTFMAAYSPVIAIRITPLAG-Q 119 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 RSF+A+E + D+P P T+ELALGV+LGV RLL+GADY PLAV Y++Y Sbjct: 120 RSFIALEFLLDEPASYPQTMELALGVALGVIRLLLGADYAPLAVHLPHDPLTPEAFYLQY 179 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIVESVRTMARQL 240 F C P+FAER GFT+R+ DL RPL+RD++AHR VVDYLSSITPLG GIVESVRT+ RQL Sbjct: 180 FGCRPYFAERVGGFTMRTADLSRPLNRDDVAHRVVVDYLSSITPLGEGIVESVRTIVRQL 239 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTGAATL VVA QFHLHPKTLQRRLA+E+TTF L+D VRK+ ADRYLRTT + L+HLA Sbjct: 240 LPTGAATLNVVAEQFHLHPKTLQRRLAEENTTFVILVDRVRKDVADRYLRTTGIGLTHLA 299 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRAT 335 RELGYAEQSVLTRSCKRWFG GPAAYR + R++ T Sbjct: 300 RELGYAEQSVLTRSCKRWFGTGPAAYRNQARLQTT 334 >tr|B2HHP8|B2HHP8_MYCMM Tax_Id=216594 SubName: Full=Transcriptional regulatory protein (Probably AraC/XylS-family);[Mycobacterium marinum] Length = 344 Score = 311 bits (798), Expect = 6e-83 Identities = 169/337 (50%), Positives = 212/337 (62%), Gaps = 1/337 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSV+RGT L+ YP LVSELG DP ALL AGV+ DVG +DAFI Sbjct: 1 MSVIRGTALTGYPALVSELGADPEALLARAGVKRSDVGRFDAFITYLALIHAVESAAAVT 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 T DFGR+LA+RQGIEILGPVG L F ++AAYSPAI ++ + Sbjct: 61 KTPDFGRRLAERQGIEILGPVGVAARTSKSVAEALDTFEHYLAAYSPAIAATMSREPGGE 120 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 SF+ +I+ P P T EL+LGV L V R L+GA Y P V Y+RY Sbjct: 121 ASFLEFKILIAHPPAHPQTTELSLGVMLRVLRFLLGAGYAPTVVDLPHPALTPREDYLRY 180 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSITPLGAG-IVESVRTMARQ 239 F CTP F R GF + S DL RPL RDELAHR V++YL ++ + S+R + RQ Sbjct: 181 FACTPRFGSHRGGFRLPSEDLQRPLVRDELAHRVVLEYLDTVIDRQRPTMASSIRELIRQ 240 Query: 240 LLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHL 299 LLPTGAAT+ V+A QF LHPK L+RRLA E T F A++D+VR+E +RYLR + M+L+HL Sbjct: 241 LLPTGAATVPVIADQFRLHPKALRRRLAAEGTNFNAVVDDVRREVTERYLRDSDMTLTHL 300 Query: 300 ARELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRATP 336 AR+LGYAEQSVL+RSC+RWFG PA+ RA+ + A+P Sbjct: 301 ARQLGYAEQSVLSRSCQRWFGASPASLRAQWQRTASP 337 >tr|B1MHJ0|B1MHJ0_MYCA9 Tax_Id=561007 SubName: Full=Probable transcriptional regulatory protein;[Mycobacterium abscessus] Length = 334 Score = 259 bits (661), Expect = 4e-67 Identities = 146/332 (43%), Positives = 185/332 (55%), Gaps = 1/332 (0%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 M+V+RG+ L+NY LV+ELGGD + LL A V D G+Y+ FI Sbjct: 1 MAVIRGSALTNYHELVAELGGDGSRLLAGARVSPTDAGSYERFISLPNGARALEATAAAL 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 DFGRQLA+RQGIEILGPVG I FM AY P I +T Sbjct: 61 NAPDFGRQLARRQGIEILGPVGLAARTAATVADAFAILEKFMGAYCPVISARVTDHRDPA 120 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 E + + P +EL+LGV+L V +GA Y P++V Y RY Sbjct: 121 LCRFEFEYLLNPAPPQAQAVELSLGVTLRVLHHFLGAGYRPVSVHLPHQALTPASAYQRY 180 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSI-TPLGAGIVESVRTMARQ 239 F C P F E GFT+R+TD+ + L +D LAH+ VDYL+ + VR + RQ Sbjct: 181 FGCPPFFCEPVGGFTLRATDMQKALPKDNLAHQTAVDYLTGTHASRKPDSSQLVRILIRQ 240 Query: 240 LLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHL 299 LLPTGA L +A +HPKTLQRRL E TFA L+D++R+E A+R L T +SL HL Sbjct: 241 LLPTGAIGLGDIALHLGVHPKTLQRRLRAEGMTFAELVDQIRREAAERLLSDTDLSLDHL 300 Query: 300 ARELGYAEQSVLTRSCKRWFGIGPAAYRAKTR 331 +R+LGYAEQSV TRSCKRWFG P+AYR+ R Sbjct: 301 SRQLGYAEQSVFTRSCKRWFGTTPSAYRSDRR 332 >tr|A4TFY2|A4TFY2_MYCGI Tax_Id=350054 SubName: Full=Transcriptional regulator, AraC family;[Mycobacterium gilvum] Length = 309 Score = 221 bits (563), Expect = 1e-55 Identities = 127/299 (42%), Positives = 166/299 (55%), Gaps = 1/299 (0%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 ++RGT L+ + LV+ELGGD L+ A + D+G +D FI T Sbjct: 1 MIRGTALTGFHELVTELGGDSHILVADAHIPFNDIGRHDRFISLPNGARLLENAADILDT 60 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 DF R+LA+RQGIEILGPVG IF FMAAYSP+I +T Sbjct: 61 PDFARRLARRQGIEILGPVGLAGRSAATVAEAFTIFDKFMAAYSPSISARVTAHLDPDLR 120 Query: 123 FVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFE 182 E + + P P +EL+LGV+L V RL +GA Y P+AV Y YF Sbjct: 121 RFEFEYLLNPPPPQAQAIELSLGVTLRVLRLFLGAAYRPVAVHLPHPALGPADDYDTYFG 180 Query: 183 CTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLS-SITPLGAGIVESVRTMARQLL 241 C P F E +GFTVR+ DL +PL +D LAH+ +DYL+ ++ + VRT+ RQLL Sbjct: 181 CPPGFCEHVAGFTVRTADLQQPLPKDRLAHQTAIDYLADTVGDYTPATSQLVRTLVRQLL 240 Query: 242 PTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 PTGA L +A LHPK LQRRLA E+TT+A L+D+ R++TA R L TA+SL LA Sbjct: 241 PTGAVGLPDIARHIGLHPKALQRRLAAENTTYAELVDQTRRDTAQRLLLDTALSLDQLA 299 >sp|Q06861|VIRS_MYCTU Tax_Id=1773 (virS)RecName: Full=Putative virulence-regulating 38 kDa protein;[Mycobacterium tuberculosis] Length = 340 Score = 153 bits (386), Expect = 3e-35 Identities = 113/331 (34%), Positives = 150/331 (45%), Gaps = 6/331 (1%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 S++R T L Y +L+ ELG DP LR + DAF+ Sbjct: 5 SLIRATNLWGYTDLMRELGADPLPFLRRFDIPPGIEHQEDAFMSLAGFVRMLEASAAELD 64 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 DFG +LA+ QG+ ILGPV L ++ +SPA+ + ++ + T R Sbjct: 65 CPDFGLRLARWQGLGILGPVAVIARNAATLFGGLEAIGRYLYVHSPALTLTVS--STTAR 122 Query: 122 SFVAIEIVPDDP-IPCP-HTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVR 179 S V +P IP P EL++ + + RLL G Y Sbjct: 123 SNVRFGYEVTEPGIPYPLQGYELSMANAARMIRLLGGPQARARVFSFRHAQLGTDAAYRE 182 Query: 180 YFECTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSS-ITPLGAGIVESVRTMA 237 CT F GF V RP+ H D R YL S P A + E V +A Sbjct: 183 ALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRIATKYLESQYLPSDATLSERVVGLA 242 Query: 238 RQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLS 297 R+LLPTG + E +A Q +HP+TLQRRLA E LI+ R+ A RYL + LS Sbjct: 243 RRLLPTGQCSAEAIADQLDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYLAQPGLYLS 302 Query: 298 HLARELGYAEQSVLTRSCKRWFGIGPAAYRA 328 +A LGY+EQS L RSC+RWFG+ P YRA Sbjct: 303 QIAVLLGYSEQSALNRSCRRWFGMTPRQYRA 333 >tr|C6DVH6|C6DVH6_MYCTK Tax_Id=478434 SubName: Full=AraC/xylS-family virulence-regulating transcriptional regulator virS;[Mycobacterium tuberculosis] Length = 341 Score = 153 bits (386), Expect = 3e-35 Identities = 113/331 (34%), Positives = 150/331 (45%), Gaps = 6/331 (1%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 S++R T L Y +L+ ELG DP LR + DAF+ Sbjct: 6 SLIRATNLWGYTDLMRELGADPLPFLRRFDIPPGIEHQEDAFMSLAGFVRMLEASAAELD 65 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 DFG +LA+ QG+ ILGPV L ++ +SPA+ + ++ + T R Sbjct: 66 CPDFGLRLARWQGLGILGPVAVIARNAATLFGGLEAIGRYLYVHSPALTLTVS--STTAR 123 Query: 122 SFVAIEIVPDDP-IPCP-HTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVR 179 S V +P IP P EL++ + + RLL G Y Sbjct: 124 SNVRFGYEVTEPGIPYPLQGYELSMANAARMIRLLGGPQARARVFSFRHAQLGTDAAYRE 183 Query: 180 YFECTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSS-ITPLGAGIVESVRTMA 237 CT F GF V RP+ H D R YL S P A + E V +A Sbjct: 184 ALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRIATKYLESQYLPSDATLSERVVGLA 243 Query: 238 RQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLS 297 R+LLPTG + E +A Q +HP+TLQRRLA E LI+ R+ A RYL + LS Sbjct: 244 RRLLPTGQCSAEAIADQLDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYLAQPGLYLS 303 Query: 298 HLARELGYAEQSVLTRSCKRWFGIGPAAYRA 328 +A LGY+EQS L RSC+RWFG+ P YRA Sbjct: 304 QIAVLLGYSEQSALNRSCRRWFGMTPRQYRA 334 >tr|A5U797|A5U797_MYCTA Tax_Id=419947 (virS)SubName: Full=AraC/XylS family virulence-regulating transcriptional regulator VirS;[Mycobacterium tuberculosis] Length = 340 Score = 153 bits (386), Expect = 3e-35 Identities = 113/331 (34%), Positives = 150/331 (45%), Gaps = 6/331 (1%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 S++R T L Y +L+ ELG DP LR + DAF+ Sbjct: 5 SLIRATNLWGYTDLMRELGADPLPFLRRFDIPPGIEHQEDAFMSLAGFVRMLEASAAELD 64 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 DFG +LA+ QG+ ILGPV L ++ +SPA+ + ++ + T R Sbjct: 65 CPDFGLRLARWQGLGILGPVAVIARNAATLFGGLEAIGRYLYVHSPALTLTVS--STTAR 122 Query: 122 SFVAIEIVPDDP-IPCP-HTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVR 179 S V +P IP P EL++ + + RLL G Y Sbjct: 123 SNVRFGYEVTEPGIPYPLQGYELSMANAARMIRLLGGPQARARVFSFRHAQLGTDAAYRE 182 Query: 180 YFECTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSS-ITPLGAGIVESVRTMA 237 CT F GF V RP+ H D R YL S P A + E V +A Sbjct: 183 ALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRIATKYLESQYLPSDATLSERVVGLA 242 Query: 238 RQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLS 297 R+LLPTG + E +A Q +HP+TLQRRLA E LI+ R+ A RYL + LS Sbjct: 243 RRLLPTGQCSAEAIADQLDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYLAQPGLYLS 302 Query: 298 HLARELGYAEQSVLTRSCKRWFGIGPAAYRA 328 +A LGY+EQS L RSC+RWFG+ P YRA Sbjct: 303 QIAVLLGYSEQSALNRSCRRWFGMTPRQYRA 333 >tr|A5WRY7|A5WRY7_MYCTF Tax_Id=336982 SubName: Full=Virulence-regulating transcriptional regulator virS (AraC/xylS family);[Mycobacterium tuberculosis] Length = 340 Score = 153 bits (386), Expect = 3e-35 Identities = 113/331 (34%), Positives = 150/331 (45%), Gaps = 6/331 (1%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 S++R T L Y +L+ ELG DP LR + DAF+ Sbjct: 5 SLIRATNLWGYTDLMRELGADPLPFLRRFDIPPGIEHQEDAFMSLAGFVRMLEASAAELD 64 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 DFG +LA+ QG+ ILGPV L ++ +SPA+ + ++ + T R Sbjct: 65 CPDFGLRLARWQGLGILGPVAVIARNAATLFGGLEAIGRYLYVHSPALTLTVS--STTAR 122 Query: 122 SFVAIEIVPDDP-IPCP-HTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVR 179 S V +P IP P EL++ + + RLL G Y Sbjct: 123 SNVRFGYEVTEPGIPYPLQGYELSMANAARMIRLLGGPQARARVFSFRHAQLGTDAAYRE 182 Query: 180 YFECTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSS-ITPLGAGIVESVRTMA 237 CT F GF V RP+ H D R YL S P A + E V +A Sbjct: 183 ALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRIATKYLESQYLPSDATLSERVVGLA 242 Query: 238 RQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLS 297 R+LLPTG + E +A Q +HP+TLQRRLA E LI+ R+ A RYL + LS Sbjct: 243 RRLLPTGQCSAEAIADQLDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYLAQPGLYLS 302 Query: 298 HLARELGYAEQSVLTRSCKRWFGIGPAAYRA 328 +A LGY+EQS L RSC+RWFG+ P YRA Sbjct: 303 QIAVLLGYSEQSALNRSCRRWFGMTPRQYRA 333 >tr|A2VNP3|A2VNP3_MYCTU Tax_Id=348776 SubName: Full=Virulence-regulating transcriptional regulator virS (AraC/xylS family);[Mycobacterium tuberculosis C] Length = 340 Score = 153 bits (386), Expect = 3e-35 Identities = 113/331 (34%), Positives = 150/331 (45%), Gaps = 6/331 (1%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 S++R T L Y +L+ ELG DP LR + DAF+ Sbjct: 5 SLIRATNLWGYTDLMRELGADPLPFLRRFDIPPGIEHQEDAFMSLAGFVRMLEASAAELD 64 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 DFG +LA+ QG+ ILGPV L ++ +SPA+ + ++ + T R Sbjct: 65 CPDFGLRLARWQGLGILGPVAVIARNAATLFGGLEAIGRYLYVHSPALTLTVS--STTAR 122 Query: 122 SFVAIEIVPDDP-IPCP-HTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVR 179 S V +P IP P EL++ + + RLL G Y Sbjct: 123 SNVRFGYEVTEPGIPYPLQGYELSMANAARMIRLLGGPQARARVFSFRHAQLGTDAAYRE 182 Query: 180 YFECTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSS-ITPLGAGIVESVRTMA 237 CT F GF V RP+ H D R YL S P A + E V +A Sbjct: 183 ALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRIATKYLESQYLPSDATLSERVVGLA 242 Query: 238 RQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLS 297 R+LLPTG + E +A Q +HP+TLQRRLA E LI+ R+ A RYL + LS Sbjct: 243 RRLLPTGQCSAEAIADQLDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYLAQPGLYLS 302 Query: 298 HLARELGYAEQSVLTRSCKRWFGIGPAAYRA 328 +A LGY+EQS L RSC+RWFG+ P YRA Sbjct: 303 QIAVLLGYSEQSALNRSCRRWFGMTPRQYRA 333 >tr|C1B9S8|C1B9S8_RHOOB Tax_Id=632772 SubName: Full=Putative AraC family transcriptional regulator;[Rhodococcus opacus] Length = 335 Score = 152 bits (385), Expect = 4e-35 Identities = 105/329 (31%), Positives = 141/329 (42%), Gaps = 2/329 (0%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 S++R T L Y +L+ ELG DP L + DAF+P G Sbjct: 3 SLIRATNLWGYGDLMRELGADPEPFLARFHIPPGVEHEEDAFVPFESVAHVLDASAVDLG 62 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 DFG +L+ QG++ILGPV + +SPA+ + + P Sbjct: 63 CPDFGLRLSHWQGLDILGPVAVIARNARTVQGAFEAIARYFYVHSPALKLTVGPRTAGGD 122 Query: 122 SFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYF 181 E+ P ELA+ + + RLL G D P + Y Sbjct: 123 VRFVYEMTEQSLRYLPQGYELAMANGVRILRLLGGPDARPSLMSFVHGQLGSDAAYRDAL 182 Query: 182 ECTPHFAERRSGFTVRSTDLVRPLHR-DELAHRAVVDYLSS-ITPLGAGIVESVRTMARQ 239 +C F + GF + R + D R YL S P A + E V +AR+ Sbjct: 183 DCVVLFGQSWCGFELPRALADRRIDSADPETRRIATKYLESHYLPSTAALSERVAELARR 242 Query: 240 LLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHL 299 LLPTG + E +A Q +HP+TLQRRLA+E LI+ R+ A RYL L + Sbjct: 243 LLPTGHCSAEAIADQLSMHPRTLQRRLAEEGVRCQDLIERERRAQAARYLAEPGFHLGQI 302 Query: 300 ARELGYAEQSVLTRSCKRWFGIGPAAYRA 328 A LGY EQS L RSC+RWFG P YRA Sbjct: 303 AGLLGYTEQSTLNRSCRRWFGKTPRQYRA 331 >tr|Q7TXA7|Q7TXA7_MYCBO Tax_Id=1765 (virS)SubName: Full=VIRULENCE-REGULATING TRANSCRIPTIONAL REGULATOR VIRS (ARAC/XYLS FAMILY);[Mycobacterium bovis] Length = 340 Score = 150 bits (378), Expect = 3e-34 Identities = 112/331 (33%), Positives = 149/331 (45%), Gaps = 6/331 (1%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 S++R T L Y +L+ ELG DP LR + DAF+ Sbjct: 5 SLIRATNLWGYTDLMRELGADPLPFLRRFDIPPGIEHQEDAFMSLAGFVRMLEASAAELD 64 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 DFG +LA+ QG+ ILGPV L ++ +SPA+ + ++ + T R Sbjct: 65 CPDFGLRLARWQGLGILGPVAVIARNAATLFGGLEAIGRYLYVHSPALTLTVS--STTAR 122 Query: 122 SFVAIEIVPDDP-IPCP-HTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVR 179 S V +P IP P EL++ + + RLL G Y Sbjct: 123 SNVRFGYEVTEPGIPYPLQGYELSMANAARMIRLLGGPQARARVFSFRHAQLGTDAAYRE 182 Query: 180 YFECTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSS-ITPLGAGIVESVRTMA 237 CT F GF V RP+ H D R YL S P A + E V +A Sbjct: 183 ALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRIATKYLESQYLPSDATLSERVVGLA 242 Query: 238 RQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLS 297 R+LLPTG + E +A Q +HP+TLQRRLA E LI+ R+ A RYL + LS Sbjct: 243 RRLLPTGQCSAEAIADQLDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYLAQPGLYLS 302 Query: 298 HLARELGYAEQSVLTRSCKRWFGIGPAAYRA 328 +A LGY+EQS L RSC+ WFG+ P YRA Sbjct: 303 QIAVLLGYSEQSALNRSCRCWFGMTPRQYRA 333 >tr|C1AGK1|C1AGK1_MYCBT Tax_Id=561275 (virS)SubName: Full=Virulence-regulating transcriptional regulator;[Mycobacterium bovis] Length = 340 Score = 150 bits (378), Expect = 3e-34 Identities = 112/331 (33%), Positives = 149/331 (45%), Gaps = 6/331 (1%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 S++R T L Y +L+ ELG DP LR + DAF+ Sbjct: 5 SLIRATNLWGYTDLMRELGADPLPFLRRFDIPPGIEHQEDAFMSLAGFVRMLEASAAELD 64 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 DFG +LA+ QG+ ILGPV L ++ +SPA+ + ++ + T R Sbjct: 65 CPDFGLRLARWQGLGILGPVAVIARNAATLFGGLEAIGRYLYVHSPALTLTVS--STTAR 122 Query: 122 SFVAIEIVPDDP-IPCP-HTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVR 179 S V +P IP P EL++ + + RLL G Y Sbjct: 123 SNVRFGYEVTEPGIPYPLQGYELSMANAARMIRLLGGPQARARVFSFRHAQLGTDAAYRE 182 Query: 180 YFECTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSS-ITPLGAGIVESVRTMA 237 CT F GF V RP+ H D R YL S P A + E V +A Sbjct: 183 ALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRIATKYLESQYLPSDATLSERVVGLA 242 Query: 238 RQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLS 297 R+LLPTG + E +A Q +HP+TLQRRLA E LI+ R+ A RYL + LS Sbjct: 243 RRLLPTGQCSAEAIADQLDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYLAQPGLYLS 302 Query: 298 HLARELGYAEQSVLTRSCKRWFGIGPAAYRA 328 +A LGY+EQS L RSC+ WFG+ P YRA Sbjct: 303 QIAVLLGYSEQSALNRSCRCWFGMTPRQYRA 333 >tr|A1KN80|A1KN80_MYCBP Tax_Id=410289 (virS)SubName: Full=Virulence-regulating transcriptional regulator virS (AraC/xylS family);[Mycobacterium bovis] Length = 340 Score = 150 bits (378), Expect = 3e-34 Identities = 112/331 (33%), Positives = 149/331 (45%), Gaps = 6/331 (1%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 S++R T L Y +L+ ELG DP LR + DAF+ Sbjct: 5 SLIRATNLWGYTDLMRELGADPLPFLRRFDIPPGIEHQEDAFMSLAGFVRMLEASAAELD 64 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 DFG +LA+ QG+ ILGPV L ++ +SPA+ + ++ + T R Sbjct: 65 CPDFGLRLARWQGLGILGPVAVIARNAATLFGGLEAIGRYLYVHSPALTLTVS--STTAR 122 Query: 122 SFVAIEIVPDDP-IPCP-HTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVR 179 S V +P IP P EL++ + + RLL G Y Sbjct: 123 SNVRFGYEVTEPGIPYPLQGYELSMANAARMIRLLGGPQARARVFSFRHAQLGTDAAYRE 182 Query: 180 YFECTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSS-ITPLGAGIVESVRTMA 237 CT F GF V RP+ H D R YL S P A + E V +A Sbjct: 183 ALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRIATKYLESQYLPSDATLSERVVGLA 242 Query: 238 RQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLS 297 R+LLPTG + E +A Q +HP+TLQRRLA E LI+ R+ A RYL + LS Sbjct: 243 RRLLPTGQCSAEAIADQLDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYLAQPGLYLS 302 Query: 298 HLARELGYAEQSVLTRSCKRWFGIGPAAYRA 328 +A LGY+EQS L RSC+ WFG+ P YRA Sbjct: 303 QIAVLLGYSEQSALNRSCRCWFGMTPRQYRA 333 >tr|Q5Z0R8|Q5Z0R8_NOCFA Tax_Id=37329 SubName: Full=Putative transcriptional regulator;[Nocardia farcinica] Length = 338 Score = 144 bits (363), Expect = 2e-32 Identities = 103/331 (31%), Positives = 151/331 (45%), Gaps = 5/331 (1%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MSV+R GL + V+ELGGD A G+ + D +P Sbjct: 1 MSVIRSAGLRGFRATVAELGGDAEEFAAAVGLPVAALDADDLLVPDQAVAAVLELAAHRL 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 D G ++A+RQ +++LGP+ L ++ ++ ++ +EI P H + Sbjct: 61 DRPDLGLRIARRQDLDMLGPLALAIRNSPTLAHVLECTSRYLFVHARSLSLEIEPDPHGE 120 Query: 121 RSFVAIE--IVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYV 178 R +A+ + P P P T +L LG + L+ Y +V Y Sbjct: 121 RGVLALRYGVRPGLPTPVQGT-DLGLGFVHRAIQRLVAPRYGLRSVELPYRPSAPAAAYE 179 Query: 179 RYFECTPHFAERRSGFTVRSTDLVRPLHR-DELAHRAVVDYLSS-ITPLGAGIVESVRTM 236 +F + V + RPL DE HR + +L+ T GA VR Sbjct: 180 EFFGAPVRTGRPAALLRVPAELADRPLSGGDENLHRLALAFLAEQATETGAATAPKVRAA 239 Query: 237 ARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSL 296 +QLL T + VVA +HP+TLQR LA E T FAA++D+VR++ A RYL TT M L Sbjct: 240 VQQLLGTTPPEIGVVARLLAMHPRTLQRSLAAEGTGFAAILDDVRRQQARRYLTTTTMPL 299 Query: 297 SHLARELGYAEQSVLTRSCKRWFGIGPAAYR 327 + +A LG AEQ+ LTR C+RW+G P R Sbjct: 300 AQVASLLGLAEQATLTRCCRRWWGRTPTQVR 330 >tr|Q397P9|Q397P9_BURS3 Tax_Id=269483 SubName: Full=Transcriptional regulator, AraC family;[Burkholderia sp.] Length = 348 Score = 134 bits (338), Expect = 1e-29 Identities = 103/340 (30%), Positives = 156/340 (45%), Gaps = 9/340 (2%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYD-AFIPXXXXXXXXXXXXXXX 60 +++R TG+ Y L++ LG DP LLR + D+G+ D A +P Sbjct: 3 AIIRSTGMKGYRELMTTLGVDPMPLLRKHKL-PADLGDVDDATVPILSVMQLMEDSAAAA 61 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 D G QLA RQ I+ILGP+ + ++ +SPA + + + Sbjct: 62 HRPDLGLQLAARQDIDILGPLAMAIQHSANVREAMTTASRYLYVHSPAAQLSVIEPSTLV 121 Query: 121 RSFVAIE---IVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXY 177 + I +VP P+ C L+ LG + R +Y LAV Y Sbjct: 122 QDAAEIRLELVVPRAPV-CRQALDQCLGRMHHLVRSFAADNYRLLAVAFPYGNSADPGAY 180 Query: 178 VRYFECTPHFAERR-SGFTVRSTDLVRPLHRDELAHRAV-VDYLSS-ITPLGAGIVESVR 234 R+F + E+ +G V L L + + + ++YL G +VE VR Sbjct: 181 ARFFGQARIYTEQEHAGLHVSPQTLGSRLENVNASLKNIALEYLQRHYGDPGLSMVERVR 240 Query: 235 TMARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAM 294 L + +A +HP+T+QR+LADE TF + DEVR+E A RYL+ T + Sbjct: 241 RALHCTLGATGGSKSAIAELLFVHPRTMQRKLADEGATFEGVRDEVRQEIALRYLQQTTI 300 Query: 295 SLSHLARELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRA 334 L+ L LG+++QSVLT+S RWFG+ P+ RA +R RA Sbjct: 301 PLAQLTSLLGFSDQSVLTQSSIRWFGMPPSKIRASSRPRA 340 >tr|A0XXY8|A0XXY8_9GAMM Tax_Id=156578 SubName: Full=Putative transcriptional regulator, AraC family protein;[Alteromonadales bacterium TW-7] Length = 343 Score = 134 bits (338), Expect = 1e-29 Identities = 88/330 (26%), Positives = 140/330 (42%), Gaps = 1/330 (0%) Query: 4 VRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGTH 63 ++ T L +LV LG D + ++ G+ ++P Sbjct: 5 IKATSLQGIDSLVKSLGADISQIMTQLGLNICFNNLEQQYLPYSTYAELLEHCAHSLNCP 64 Query: 64 DFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRSF 123 FG QLA +Q +ILGP+ L ++ ++PA+ + I PL + F Sbjct: 65 SFGLQLANKQSFDILGPIAIAAKSSTNLGDALNWVIKYLHLHTPALSLTIHPLEADKTLF 124 Query: 124 VAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFEC 183 ++ +I + LEL +G+++GV + + P AV Y YF C Sbjct: 125 LSFQINLNPLPKTTQVLELTIGLAIGVIKKISNNTCKPQAVFLPQKQLTNTRAYNTYFGC 184 Query: 184 TPHFAERRSGFTVRSTDLVRPLHRDELAH-RAVVDYLSSITPLGAGIVESVRTMARQLLP 242 +G + TDL + + + A + +L+ + V + R +LP Sbjct: 185 KVTHNRNSAGIVILKTDLALSIAQPQYDKVPAALQFLAQSEQQNQSLPTQVSALIRPMLP 244 Query: 243 TGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLARE 302 T E +AA +HP+TL R L +T+F L D R+ A YL S+S ++ Sbjct: 245 IYQCTNETIAAALGMHPRTLHRELNKHNTSFVKLKDSTRRSLAAHYLTQNHYSISTISEL 304 Query: 303 LGYAEQSVLTRSCKRWFGIGPAAYRAKTRV 332 LGY EQ+ L+ S KRWFG P AYRAK + Sbjct: 305 LGYQEQATLSASVKRWFGYSPRAYRAKKMI 334 >tr|B9AYR7|B9AYR7_9BURK Tax_Id=513051 SubName: Full=Transcriptional regulator, AraC family;[Burkholderia multivorans CGD1] Length = 338 Score = 134 bits (337), Expect = 2e-29 Identities = 98/335 (29%), Positives = 146/335 (43%), Gaps = 8/335 (2%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 ++R +GL YP L+ ++G DP LLR + E + D I G Sbjct: 4 LLRASGLRGYPTLMRDMGCDPVPLLRRYHITEAALERDDTLISLRSATHLLEASAEVTGC 63 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 DFG +L+ Q I++LGP+ L ++ +SP I + + + + Sbjct: 64 GDFGLRLSSYQSIDVLGPLSVVLRNAPTIRDALNDVMRYLFVHSPGIVVSVNERSRLVEN 123 Query: 123 FVAI--EIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 VA+ E+ P+ +L L + RL G Y AV Y R+ Sbjct: 124 TVAVSVELHLSGPVVTRQNSDLCLADAHNFLRLFAGDRYALQAVSIPHEPVVGRAVYERF 183 Query: 181 FECTPHFAERRSGFTV---RSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIV-ESVRTM 236 F E G T+ R T + H+ DY+ G + VR + Sbjct: 184 FGAK--LLEEPVGATLYLARDTFTANVQGANASFHQIAEDYIFRNFGAAQGSTSDRVRQV 241 Query: 237 ARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSL 296 RQ L T +A VAA LHP+TLQRRL E T+F L D+VRK+ A YLR T +S+ Sbjct: 242 LRQTLGTSSADKAGVAAVLALHPRTLQRRLCAEGTSFEILRDDVRKQLAVHYLRNTRLSI 301 Query: 297 SHLARELGYAEQSVLTRSCKRWFGIGPAAYRAKTR 331 ++ LG+ QS L+R+C++WF + P+ R R Sbjct: 302 GQISLMLGFPAQSALSRACRQWFDLTPSEIRVGNR 336 >tr|A9ANL1|A9ANL1_BURM1 Tax_Id=395019 SubName: Full=AraC family transcriptional regulator; SubName: Full=Transcriptional regulator, AraC family;[Burkholderia multivorans] Length = 338 Score = 134 bits (336), Expect = 2e-29 Identities = 98/335 (29%), Positives = 146/335 (43%), Gaps = 8/335 (2%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 ++R +GL YP L+ ++G DP LLR + E + D I G Sbjct: 4 LLRASGLRGYPALMRDMGCDPVPLLRRYHITEAALERDDTLISLRSATHLLEASAEVTGC 63 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 DFG +L+ Q I++LGP+ L ++ +SP I + + + + Sbjct: 64 GDFGLRLSSYQSIDVLGPLSVVLRNAPTIRDALNDVMRYLFVHSPGIVVSVNERSRLVEN 123 Query: 123 FVAI--EIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 VA+ E+ P+ +L L + RL G Y AV Y R+ Sbjct: 124 TVAVSVELHLSGPVVTRQNSDLCLADAHNFLRLFAGDRYALQAVSIPHEPVVGRAVYERF 183 Query: 181 FECTPHFAERRSGFTV---RSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIV-ESVRTM 236 F E G T+ R T + H+ DY+ G + VR + Sbjct: 184 FGA--RLLEEPVGATLYLARDTFAANVQGANASFHQIAEDYIFRNFGAAQGSTSDRVRQV 241 Query: 237 ARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSL 296 RQ L T +A VAA LHP+TLQRRL E T+F L D+VRK+ A YLR T +S+ Sbjct: 242 LRQTLGTSSADKAGVAAVLALHPRTLQRRLCAEGTSFEILRDDVRKQLAVHYLRNTRLSI 301 Query: 297 SHLARELGYAEQSVLTRSCKRWFGIGPAAYRAKTR 331 ++ LG+ QS L+R+C++WF + P+ R R Sbjct: 302 GQISLMLGFPAQSALSRACRQWFDLTPSEIRVGNR 336 >tr|B7X5G2|B7X5G2_COMTE Tax_Id=399795 SubName: Full=Transcriptional regulator, AraC family;[Comamonas testosteroni KF-1] Length = 345 Score = 130 bits (328), Expect = 2e-28 Identities = 94/346 (27%), Positives = 147/346 (42%), Gaps = 28/346 (8%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 M+ VR L+ + +LV GGDPAA+L A G+ D+ + + ++P Sbjct: 11 MTSVRAASLAGFEDLVRTQGGDPAAILGACGLVPDDLADPERYLPSHAVALAIEEAACVL 70 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 G DFG +L RQG+E LG +G +M ++ ++P + + Sbjct: 71 GVQDFGLRLCARQGVETLGLLGLVIQSAPTVREGMMQGGKYVHFHNPTL---------SY 121 Query: 121 RSFVAIEIVPDDPIPC-------------PHTLELALGVSLGVFRLLMGADYTPLAVXXX 167 R+F+A PD+ + C P E+ + + +L P A+ Sbjct: 122 RTFMA----PDEGLECVEVLSRLPPHAHMPQGTEICVAYMCRLIHVLSEGALRPSAIHLR 177 Query: 168 XXXXXXXXXYVRYFECTPHFAERRSGFTVRSTDLVRPLHR-DELAHRAVVDYLSSITP-L 225 Y R+ P F G + +P+ R + L + V +L P Sbjct: 178 HAPVGSSAQYRRHLGQLPRFGSSFDGIAIDPLAWRQPMPRHNRLLQQFVERFLLGAAPGR 237 Query: 226 GAGIVESVRTMARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETA 285 + + VR+ L+ G A L A HP+TLQRRL E F L D R+ Sbjct: 238 NTSVTDQVRSALANLVRMGMADLPSAARALSQHPRTLQRRLQAEGAAFEELRDSARRTWV 297 Query: 286 DRYLRTTAMSLSHLARELGYAEQSVLTRSCKRWFGIGPAAYRAKTR 331 + L +SL H+A+ LGY++Q+VLTR+C+RWFG P R +R Sbjct: 298 AQLLAQPELSLGHIAQLLGYSDQAVLTRACQRWFGQSPRQLRHGSR 343 >tr|Q46QT2|Q46QT2_RALEJ Tax_Id=264198 SubName: Full=Transcriptional regulator, AraC family;[Ralstonia eutropha] Length = 339 Score = 130 bits (327), Expect = 2e-28 Identities = 106/340 (31%), Positives = 156/340 (45%), Gaps = 16/340 (4%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 ++VR +GL YP L+ +LG DP LL+ + E +G+ DA I Sbjct: 3 ALVRASGLRGYPALMRDLGCDPTPLLQRYHLDEGALGSDDAMISLRAVVHLLEASAEQTR 62 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIF--HTFMAAYSPAIHIEITPLAHT 119 T D G +L++ Q I++LGP+ + HTF+ +SP + + H Sbjct: 63 TGDLGLRLSRHQSIDVLGPLSIALQNAPTIRAAMDFAARHTFV--HSPGLVYAV----HK 116 Query: 120 QRSF------VAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXX 173 F V+IEI T++L L RLL G Y AV Sbjct: 117 HSEFANDAAEVSIEIRLSRQPAQRQTIDLCLADIHNFTRLLAGDRYLLRAVSVPHTPVVP 176 Query: 174 XXXYVRYFECTPHFAERRSGFTV-RSTDLVRPLHRDELAHRAVVDYLSSITPLGAGIV-E 231 Y R+F + R+ + RST L D R DY+ G V + Sbjct: 177 VSTYERFFGARVWVEQPRASLHLSRSTLAADLLGVDATLRRIAEDYIFRHFGSEQGSVSD 236 Query: 232 SVRTMARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRT 291 VR + RQ L T + + VA LHP+T+QRRLA E+T+F A+ D+VR+E A RYL Sbjct: 237 RVRQVLRQTLGTSSHSKATVADLLALHPRTMQRRLAAEATSFEAIRDDVRRELAMRYLCE 296 Query: 292 TAMSLSHLARELGYAEQSVLTRSCKRWFGIGPAAYRAKTR 331 T++ L ++ LG QS L+R+C++W+G+ P+A R R Sbjct: 297 TSLPLGQISLLLGLPAQSALSRACRQWYGVPPSALRKHKR 336 >tr|Q3IDB3|Q3IDB3_PSEHT Tax_Id=326442 SubName: Full=Putative transcriptional regulator, AraC family;[Pseudoalteromonas haloplanktis] Length = 332 Score = 128 bits (322), Expect = 9e-28 Identities = 85/330 (25%), Positives = 145/330 (43%), Gaps = 3/330 (0%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 S++R T L L+ E G + A+++A + + ++ Sbjct: 3 SLIRATSLQGIDTLILEFGANVTAIMQACNINVDFTQLENQYVSYRCYAALLEYCAQQFN 62 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 FG +LA RQ +ILG + L ++ +SPA+ + PL + Sbjct: 63 CPSFGLKLASRQSFDILGYISIAAKSGTYLSDALDWVVKYLHLHSPALRLTAHPLEDDKS 122 Query: 122 SFVAIEIVPDDPIP-CPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 F++ EI + P+P EL +G+++G + L P+ V Y Y Sbjct: 123 LFLSFEINLN-PLPNINQVTELTIGLAMGAIKKLSNNQCKPITVFLPQKLTTSKYAYNSY 181 Query: 181 FECTPHFAERRSGFTVRSTDLVRPLHRDELAH-RAVVDYLSSITPLGAGIVESVRTMARQ 239 F+C +G + DL L + EL + A ++L+ + + + V + R Sbjct: 182 FDCKVIEHRNSAGIVIAKQDLSIALEQGELINVEAARNFLAKNSQYNSPLPIQVSALMRP 241 Query: 240 LLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHL 299 +LP + +AA ++HP+TL R+LA +T+F L D R+ A YL +++S + Sbjct: 242 MLPIYQCSNHTIAAALNMHPRTLHRKLAKHNTSFVKLKDATRRALAQHYLTQGQLTISTI 301 Query: 300 ARELGYAEQSVLTRSCKRWFGIGPAAYRAK 329 + LGY EQ+ L+ S KRWFG P R+K Sbjct: 302 SELLGYQEQATLSTSVKRWFGCSPRVMRSK 331 >tr|Q1LCN8|Q1LCN8_RALME Tax_Id=266264 SubName: Full=Transcriptional regulator, AraC family;[Ralstonia metallidurans] Length = 339 Score = 125 bits (313), Expect = 1e-26 Identities = 102/338 (30%), Positives = 148/338 (43%), Gaps = 12/338 (3%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 ++VR +GL YP L+ +G DPA LLR V E + + DA I Sbjct: 3 ALVRTSGLRGYPALMRAMGCDPAPLLRRYHVDEGALDSDDAMISLRAVVHLLEASAEQTR 62 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAI------HIEITP 115 T DFG +L+ Q I++LGP+ + M +SP + H EI Sbjct: 63 TGDFGLRLSNHQSIDVLGPLSIALQNATTIRAGMDFAAHHMFVHSPGLVYTVHEHSEIAK 122 Query: 116 LAHTQRSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXX 175 A + V+IEI ++L L RLL G Y AV Sbjct: 123 DA----AEVSIEIRLSRQPAQRQAIDLCLADMHNFTRLLAGDRYALRAVSIPHTPIASLS 178 Query: 176 XYVRYFECTPHFAERRSGFTV-RSTDLVRPLHRDELAHRAVVDYL-SSITPLGAGIVESV 233 Y R+F + R+ + RST L D R DY+ + + + V Sbjct: 179 TYERFFGARVLVEQPRASLHLSRSTLAADLLGVDATLRRIAEDYIFRNFRSEHGSVSDRV 238 Query: 234 RTMARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTA 293 R + R L T + + VA +HP+T+QRRL E+T+F A+ ++VRKE A RYL T Sbjct: 239 RQVLRDTLGTSSHSKASVADLLAMHPRTMQRRLTAEATSFEAIRNDVRKELAMRYLSETN 298 Query: 294 MSLSHLARELGYAEQSVLTRSCKRWFGIGPAAYRAKTR 331 + L + LG QS L+R+C++W+G P+A R R Sbjct: 299 LPLGQITLLLGLPAQSALSRACRQWYGAAPSALRKHKR 336 >tr|A4FHN9|A4FHN9_SACEN Tax_Id=405948 SubName: Full=Putative transcriptional regulator;[Saccharopolyspora erythraea] Length = 336 Score = 124 bits (312), Expect = 1e-26 Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 6/331 (1%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MS++R GL + V+ELGG RAAG+ + D +P Sbjct: 1 MSMIRSAGLRGFRATVAELGGRAEDHARAAGLPVAALDVDDLLVPDHVLAEVLEIAAAEL 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 G D G ++A RQ + +LGP+ L ++ ++ ++ + + H Sbjct: 61 GCPDLGLRVAARQDLGMLGPLALAIQNSPSVGDALECTSRYLFVHARSLSLVLEDDPHGA 120 Query: 121 RSFVAIE--IVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYV 178 R A+ + P PI T +LALG L+ Y L + Sbjct: 121 RGVAALRYGLPPGAPIAVQAT-DLALGFLHRAIEFLVSGPYG-LRTVELPHTPRSLRAHE 178 Query: 179 RYFECTPHFAERRSGFTVRSTDLVRPLH-RDELAHRAVVDYLSSITPLGAGIVES-VRTM 236 +F + + RPL DE + + +L+ P A ++ VR + Sbjct: 179 EFFGVPVRTGSSAPMLRLPRSLAARPLTGSDERVRQLALGFLAEQAPGEATLLAPRVRAV 238 Query: 237 ARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSL 296 Q L T + + VVA ++HP+T+QRRLA E T+FA ++D+VR+E A RYL TT M + Sbjct: 239 VAQSLGTASPEIGVVAGLVNMHPRTMQRRLARERTSFARILDDVRREAARRYLTTTDMPM 298 Query: 297 SHLARELGYAEQSVLTRSCKRWFGIGPAAYR 327 S + LG +EQS L+R C+RW+G P+A R Sbjct: 299 SQVTGLLGLSEQSALSRCCRRWWGSTPSAVR 329 >tr|A1WHE5|A1WHE5_VEREI Tax_Id=391735 SubName: Full=Transcriptional regulator, AraC family;[Verminephrobacter eiseniae] Length = 337 Score = 121 bits (304), Expect = 1e-25 Identities = 95/340 (27%), Positives = 143/340 (42%), Gaps = 24/340 (7%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 MS+VR G++ + +LV GGDPAA+LR G+ D+ N + ++P Sbjct: 1 MSLVRAAGMAGFEDLVRRCGGDPAAILRTGGLAPGDLVNPERYLPTRCAALAIEAAARTL 60 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMI------FHTFMAAY----SPAIH 110 G DFG +L Q I+ LG +G ++ FHT Y +P Sbjct: 61 GAPDFGLRLCAIQSIDTLGLLGLVIQSAPTVREGMLQGAKYIRFHTTTLGYRTFMAPGEG 120 Query: 111 IEITPLAHTQRSFVAIEIVPDDPIP-CPHTLELALGVSLGVFRLLMGADYTPLAVXXXXX 169 +E + Q+ P+P P E+ + + +L P + Sbjct: 121 LECLEVFQRQQ-----------PLPDAPQFAEICVAYLCRLTDVLSAGALRPTVIYCRHA 169 Query: 170 XXXXXXXYVRYFECTPHFAERRSGFTVRSTDLVRPLHR-DELAHRAVVDYLSSITPLGAG 228 Y R+ P F G + +P+ R + L + V +L +P G Sbjct: 170 PVGSSAQYRRHLGQLPRFNAAFDGIAIDPQAWRQPMPRHNRLLQQFVERFLLGSSPGRDG 229 Query: 229 -IVESVRTMARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADR 287 + VR + L+ G L VA P+TLQRRL E F L + R+ A + Sbjct: 230 SAADHVRGVLDSLVRMGTTDLGAVARALGQSPRTLQRRLQAEGAVFEKLREAARQAWARQ 289 Query: 288 YLRTTAMSLSHLARELGYAEQSVLTRSCKRWFGIGPAAYR 327 L +SL H+A+ LGYA+QSVLTR+C+RWFG+ P R Sbjct: 290 LLEQPDLSLGHIAQLLGYADQSVLTRACQRWFGVSPRQLR 329 >tr|A3TS21|A3TS21_9MICO Tax_Id=313589 SubName: Full=Putative transcriptional regulator;[Janibacter sp. HTCC2649] Length = 338 Score = 121 bits (303), Expect = 1e-25 Identities = 93/329 (28%), Positives = 138/329 (41%), Gaps = 5/329 (1%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 ++R L + LV ELGGDP AL G+ + + DA + Sbjct: 4 MIRAASLRGFAPLVRELGGDPDALYARFGIDVGALAHDDALVSITDHDRMLDVTARELDC 63 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 D G +LA Q I ILGP+ + +F+ +SPA+ I + P R Sbjct: 64 PDLGLRLATSQDITILGPMAVAIEASSTVAEAVECASSFIFVHSPALSIGVEPDPRGVRG 123 Query: 123 FVAIEIVPDDPIPCPHT---LELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVR 179 VA+ DP P++ +EL L + V L+G Y +V YV Sbjct: 124 VVALTY-RKDPRQSPYSPQGIELGLALFHQVAAFLIGERYGLRSVEIPHAPLSPVSRYVE 182 Query: 180 YFECTPHFAERRSGFTVRSTDLVRPLHRDELA-HRAVVDYLSSITPLGAGIVESVRTMAR 238 F F V + + A H + +L S + VR Sbjct: 183 AFGAEVKFGGETPALRVHRSTMDATFESANAAIHAMALKHLRSHENPTRTVAARVRLALA 242 Query: 239 QLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSH 298 ++L +L+ A + P+TLQR LA E+TTF ++D+VR E A RYL T + +S Sbjct: 243 EVLGNSDPSLDTAARLLQVQPRTLQRHLAQENTTFELVLDQVRHEAARRYLTMTDLPMSQ 302 Query: 299 LARELGYAEQSVLTRSCKRWFGIGPAAYR 327 +A +G+AEQS L+R+ +RW G P R Sbjct: 303 IAALVGFAEQSTLSRAVRRWEGQSPREVR 331 >tr|B0KFL7|B0KFL7_PSEPG Tax_Id=76869 SubName: Full=Transcriptional regulator, AraC family;[Pseudomonas putida] Length = 342 Score = 120 bits (300), Expect = 3e-25 Identities = 92/332 (27%), Positives = 135/332 (40%), Gaps = 11/332 (3%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 M +RG+ L Y L+ E G L + VGNY +P Sbjct: 6 MDSIRGSALLQYDQLLVEHGAAQRDFLAPLHIAPDVVGNYGKHLPYLSLVQLFEGSAHAL 65 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQ 120 FG +LA RQG ++GP+ L+ +M YSPAIH + A Sbjct: 66 SLPRFGLELALRQGSTLVGPLRHLANSAPTVGHALVAVIRYMRHYSPAIHFRLEHRAGQA 125 Query: 121 RSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMG----ADYTPLAVXXXXXXXXXXXX 176 F D+ +P + S+ RLL+G A P AV Sbjct: 126 MLFF------DNGLPSSEQTPQIVEKSVMGARLLIGELRGAPLRPRAVTLRHAALGDASG 179 Query: 177 YVRYFECTPHFAERRSGFTVRSTDLVRP-LHRDELAHRAVVDYLSSITPLGAGIVESVRT 235 Y RYF+C F + + + + L +H D H V +L + ++ SV Sbjct: 180 YTRYFDCPVLFGQAHNSLVLGADVLQEACVHHDADLHAIVRHFLENQAVPCDSLLASVER 239 Query: 236 MARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMS 295 + LLP TLE VA +++ +TLQR LA + F +D +R+ A + LR T +S Sbjct: 240 KIQMLLPAQRCTLEQVALALNMNSRTLQRHLASDGIEFEGYLDGIRRCQAQQMLRKTTLS 299 Query: 296 LSHLARELGYAEQSVLTRSCKRWFGIGPAAYR 327 + +A ELGY + R+ RWF I P +R Sbjct: 300 VGQIANELGYRRTTSFCRAHLRWFDITPLEHR 331 >tr|D0IUT8|D0IUT8_COMTE Tax_Id=688245 SubName: Full=Transcriptional regulator, AraC family;[Comamonas testosteroni CNB-2] Length = 344 Score = 119 bits (298), Expect = 5e-25 Identities = 102/346 (29%), Positives = 144/346 (41%), Gaps = 17/346 (4%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 ++ VR L+N+ L SELGGDP A LR AG+R V D I Sbjct: 2 VTFVRAASLTNFSELFSELGGDPDAALRRAGLRPAVVREQDQLIDALTAGRLLEEAASIT 61 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXL--MIFHTFMAAYSPAIHIEITPLAH 118 G +FG ++AQ + + G V L +I H M S IH++ Sbjct: 62 GCENFGLRMAQSRQVSNFGVVSLLLLHQPTLRKVLSTLIEHVHMLNESLVIHMDDANGVV 121 Query: 119 TQRSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYV 178 R + P P ++ELA+GV LL+ + PL V + Sbjct: 122 VLREEFTL------PDALPQSMELAIGVLFRTCNLLLHEQWRPLRVCFSHPAPGDTGLHK 175 Query: 179 RYFECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSI---TPLG--AGIVESV 233 + F C F +G R+ DL P + LA +V Y ++ T G A I + V Sbjct: 176 QMFRCRVEFDADFNGIVFRTEDLDAP---NPLADPVLVRYAKTMVDTTQQGRQASIGQQV 232 Query: 234 RTMARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTA 293 R +LP+G AT VA +TLQR L E +F L+ EVR + A RY+R Sbjct: 233 RKAIYLMLPSGNATCICVAQGLGRSVRTLQRELDGEGLSFTDLLQEVRSDLAQRYVRNPD 292 Query: 294 MSLSHLARELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRATPRRR 339 + +A LGY S TR FG P +R + + +P+RR Sbjct: 293 YPVGQIASMLGYNSHSAFTRWFSTLFGCPPEVWRER-NLPPSPQRR 337 >tr|A8GAZ0|A8GAZ0_SERP5 Tax_Id=399741 SubName: Full=Transcriptional regulator, AraC family;[Serratia proteamaculans] Length = 345 Score = 119 bits (297), Expect = 7e-25 Identities = 99/334 (29%), Positives = 146/334 (43%), Gaps = 9/334 (2%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYD-AFIPXXXXXXXXXXXXXXX 60 +++ TG Y L++ELG DP LLR G+ D+G D A +P Sbjct: 7 TMINSTGFKGYSGLMNELGVDPLPLLRKHGL-PVDLGEVDDAVVPIIPVMQLMEESALVT 65 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEI---TPLA 117 DFG LA RQGI+I+GP+ + F+ +SPA+ + I +PL Sbjct: 66 QHLDFGLTLAARQGIDIIGPLAMAIQHSKNVREAMDTASRFLYVHSPAVQLSIIDPSPLI 125 Query: 118 HTQRSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXY 177 + VP+ P+ T+E L + + +Y LA+ Y Sbjct: 126 PGAVEIRLEQAVPNAPL-FRQTIEHCLSRLHYLLKSFAKDNYHLLAITFPYGDVSNFSDY 184 Query: 178 VRYFECTPHFAERR-SGFTVRSTDLVRPLHR-DELAHRAVVDYLSS-ITPLGAGIVESVR 234 R+F E SG + L L L +DYL + VR Sbjct: 185 RRFFGPAQVCLEHEFSGLHLSPKTLNSKLDNVSSLLKNIALDYLQRHYGNPELSMTSRVR 244 Query: 235 TMARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAM 294 + + +A LHP+T+QR+LA+ES TF + D VR+E A R+L T + Sbjct: 245 RALHCTIGAMGGSKSSIAELLFLHPRTMQRKLAEESATFEGIRDGVRQEIALRFLTQTRI 304 Query: 295 SLSHLARELGYAEQSVLTRSCKRWFGIGPAAYRA 328 L+ LA LG+++QSVLT S +RWFG+ P+ RA Sbjct: 305 PLAQLAAILGFSDQSVLTTSSRRWFGMSPSKVRA 338 >tr|B7WRD8|B7WRD8_COMTE Tax_Id=399795 SubName: Full=Transcriptional regulator, AraC family;[Comamonas testosteroni KF-1] Length = 344 Score = 117 bits (293), Expect = 2e-24 Identities = 100/345 (28%), Positives = 141/345 (40%), Gaps = 16/345 (4%) Query: 1 MSVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXX 60 ++ VR L+N+ L SELGGDP A LR AG+R V D I Sbjct: 2 VTFVRAASLTNFSELFSELGGDPDAALRRAGLRPAVVREQDQLIDALTAGRLLEEAASIT 61 Query: 61 GTHDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXL--MIFHTFMAAYSPAIHIEITPLAH 118 G +FG ++AQ + + G V L +I H M S IH++ Sbjct: 62 GCENFGLRMAQSRQVSNFGVVSLLLLHQPTLRKVLSTLIEHVHMLNESLVIHMDDANGVV 121 Query: 119 TQRSFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYV 178 R + P P ++ELA+GV LL+ + PL V + Sbjct: 122 VLREEFTL------PDALPQSMELAIGVLFRTCNLLLHEQWRPLRVCFSHPAPCNTGLHK 175 Query: 179 RYFECTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSSI---TPLG--AGIVESV 233 + F C F +G R+ DL P + LA +V Y ++ T G A + + V Sbjct: 176 QMFRCRVEFDADFNGIVFRTEDLDAP---NPLADPVLVRYAKTMVDTTQQGRQASVGQQV 232 Query: 234 RTMARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTA 293 R +LP+G AT VA +TLQR L E +F L+ EVR + A RY+R Sbjct: 233 RKAIYLMLPSGNATCICVAQGLGRSVRTLQRELDGEGLSFTGLLQEVRSDLARRYVRNPD 292 Query: 294 MSLSHLARELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVRATPRR 338 + +A LGY S TR FG P +R + + RR Sbjct: 293 YPVGQIATMLGYNSHSAFTRWFGTLFGCPPEVWRERNPPPSPQRR 337 >tr|Q46R37|Q46R37_RALEJ Tax_Id=264198 SubName: Full=Transcriptional regulator, AraC family;[Ralstonia eutropha] Length = 351 Score = 117 bits (292), Expect = 3e-24 Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 4/330 (1%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 ++R L+ Y LV LG DP A LR G+ + + + + IP G Sbjct: 9 LIRSASLNGYIELVESLGLDPYAFLRGVGLSARLLEDPERLIPSHAVRELLEVTAAATGV 68 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 DF +LA ++ LGP+ L ++ S ++ I +T Sbjct: 69 EDFALRLAAQRSFSNLGPISLVLKEEPTPRLALETLCRYLKLLSASLITRIEDSGNTV-- 126 Query: 123 FVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFE 182 V E+VP + +ELA+GV + R L+G + P+ V + +F Sbjct: 127 IVREELVPSPGLATRQAMELAVGVKFRILRELIGPRWRPVEVCFTHRAPLDVSAHRVFFG 186 Query: 183 CTPHFAERRSGFTVRSTDLVRPLHRDEL-AHRAVVDYL-SSITPLGAGIVESVRTMARQL 240 C P F + +G + DL P + A R DYL +++ GI ES R + L Sbjct: 187 CKPIFNQSFNGLVCAAADLQMPRTTENAGAARFARDYLETALRQRSEGIRESCRELILAL 246 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LP G T + +A + +TL R L E TF+ L++EVR E R+LR + + + ++ Sbjct: 247 LPGGRCTAQQLAHHLRVDRRTLYRYLNAEGVTFSELLNEVRAELVIRHLRESDLPVGEVS 306 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKT 330 LG++ QS + + FG + +R +T Sbjct: 307 ALLGFSAQSCFSHWFRVTFGCSASEWRRQT 336 >tr|C1B884|C1B884_RHOOB Tax_Id=632772 SubName: Full=Putative AraC family transcriptional regulator;[Rhodococcus opacus] Length = 355 Score = 117 bits (292), Expect = 3e-24 Identities = 89/329 (27%), Positives = 145/329 (44%), Gaps = 4/329 (1%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 + R L+ Y L LG +PA +LRAAG+ +G D +IP G Sbjct: 23 LARYAALNGYVELCRSLGLEPAPMLRAAGLDPSGLGLQDRWIPAAAIARLLEQSADGSGY 82 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 DFG +LA+R+ LGP+ L + + Y+ A+ ++ H Sbjct: 83 GDFGVRLAERRQFSNLGPLSLVVREEPDVRSALRVLTRYEHTYNEALRTRMSE--HGGLV 140 Query: 123 FVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFE 182 + +E+ + ++ELA+GV + R +G + PLAV + R F Sbjct: 141 TLRVELDVGEATEVRQSVELAIGVLHRLLRGFLGGGWKPLAVCFPHPAPEDTATHRRLFG 200 Query: 183 CTPHFAERRSGFTVRSTDLVRPLHR-DELAHRAVVDYLSSITPLG-AGIVESVRTMARQL 240 +F +G + + DL P D L L S P IV VR + L Sbjct: 201 PVLNFDHEFAGIVLEAGDLNAPNKMSDPLLRPYTQQLLESWEPSDDVTIVSRVRELIELL 260 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTG ++E VA + +T+ RRLA+ TF+ ++D R E A+R + ++L+ +A Sbjct: 261 LPTGRCSVEQVARSLGVDRRTVHRRLAESGETFSTVLDGTRTELAERMVANPRLNLTEIA 320 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAK 329 L ++ S +R + FG+ P+ +RA+ Sbjct: 321 DMLAFSAPSNFSRWFRGRFGVSPSVWRAQ 349 >tr|A9BT85|A9BT85_DELAS Tax_Id=398578 SubName: Full=Transcriptional regulator, AraC family;[Delftia acidovorans] Length = 360 Score = 117 bits (292), Expect = 3e-24 Identities = 91/336 (27%), Positives = 142/336 (42%), Gaps = 7/336 (2%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 ++R L Y +LV LG DPA L+RAAG+ + + + + IP GT Sbjct: 23 LIRSASLHGYADLVKSLGHDPAVLVRAAGLSARLLDDPETLIPIHAVRELLEVAARTTGT 82 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 DF +LA R+ + LGP+ L ++ S + + I Sbjct: 83 QDFALRLAARRSLSHLGPISLVLQQEPTPRQALDTLCRYLKLLSAGMFVRIEDAG--SGV 140 Query: 123 FVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFE 182 V ++VP + ++ELA+GV V R L+GA + P V + +F Sbjct: 141 LVRQDLVPIAGMAMRQSMELAVGVMFRVLRELIGAQWRPQQVSFVHRAPADASAHRAFFG 200 Query: 183 CTPHFAERRSGFTVRSTDLVRPLHRDELAHRAVVDYLSS-----ITPLGAGIVESVRTMA 237 TP F + +G R DL + V + S + G G+ + R + Sbjct: 201 VTPLFDQPFNGMVCRLADLQLLRECGQAQGSGVARFARSHLEQALRSRGEGMQAACRELI 260 Query: 238 RQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLS 297 LLP G T + VA Q + +TL RRL E TF+AL+D +R+E R+L+ L Sbjct: 261 IALLPGGRCTAQQVARQLGMDRRTLHRRLLAEGQTFSALLDTIRRELVLRHLQDGGQPLG 320 Query: 298 HLARELGYAEQSVLTRSCKRWFGIGPAAYRAKTRVR 333 +A LG+A S + FG + +R + + R Sbjct: 321 EVAGLLGFAAPSGFCHWFRAAFGASVSDWRRRGQGR 356 >tr|Q1N1S3|Q1N1S3_9GAMM Tax_Id=207949 SubName: Full=Transcriptional regulator, AraC family protein;[Bermanella marisrubri] Length = 338 Score = 115 bits (287), Expect = 1e-23 Identities = 90/331 (27%), Positives = 142/331 (42%), Gaps = 14/331 (4%) Query: 4 VRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGTH 63 +R L ++ LV LGGD LL + + D+ ++ I T Sbjct: 5 IRSGSLQSFSRLVKSLGGDSETLLTQCNLTQDDLRQHEHRIEFESMVKLLDLSATELKTP 64 Query: 64 DFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITP---LAHTQ 120 DF +LA+ QGI+ LGP+G L+ +MA +S + + LA+ + Sbjct: 65 DFALRLAKLQGIQALGPLGLLIQNSATVRDALLAAQRYMAIHSQGEYWRLDEEDELAYIE 124 Query: 121 R--SFVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYV 178 R +F + EL+ GV L + + LMG D P + Y Sbjct: 125 RYEAFHGLSYARQYK-------ELSFGVCLRLAKSLMGEDIEPRCLEFAHAPISDPQIYR 177 Query: 179 RYFECTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSS-ITPLGAGIVESVRTM 236 +F C F + V L RP+ E + V YL + I P + V+T+ Sbjct: 178 NHFNCQVLFNQEHDRLVVPKALLDRPIPEASEAEYAQVEQYLQAMIQPFEGDLERQVQTL 237 Query: 237 ARQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSL 296 Q L ++E + A LH +TLQRRL D+S F ++++VR TA L ++ M + Sbjct: 238 ILQTLGLKEHSIENIGAMLGLHKRTLQRRLKDQSLNFKEILNDVRVRTACWQLESSNMDM 297 Query: 297 SHLARELGYAEQSVLTRSCKRWFGIGPAAYR 327 + L+ LGY++ S +R+ K GI P +R Sbjct: 298 TLLSEMLGYSDVSAFSRAFKTRMGISPLKWR 328 >tr|Q0SA49|Q0SA49_RHOSR Tax_Id=101510 SubName: Full=Probable transcriptional regulator, AraC family protein;[Rhodococcus sp.] Length = 336 Score = 114 bits (284), Expect = 2e-23 Identities = 89/329 (27%), Positives = 141/329 (42%), Gaps = 4/329 (1%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 + R L+ Y L LG +PA LLR+AG+ +G D +IP G Sbjct: 4 LARYASLNGYVELCRSLGLEPAPLLRSAGLDPSGLGLQDRWIPAAAIAWLLEASVSASGY 63 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 DFG +LA+R+ LGP+ L + + Y+ A+ ++ Sbjct: 64 DDFGLRLAERRQFSNLGPLSLVVREEPDVRSALRVLTRYEHTYNEALRTRMSERGGLVTL 123 Query: 123 FVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFE 182 V +++ I ++ELA+GV + R +G + PLAV + R F Sbjct: 124 RVELDVGETTEIR--QSVELAVGVLHRLLRGFLGGGWKPLAVCFPHPAPPDTATHRRLFG 181 Query: 183 CTPHFAERRSGFTVRSTDLVRPLHR-DELAHRAVVDYLSSITPLG-AGIVESVRTMARQL 240 +F +G + + DL P D L L S P IV VR + L Sbjct: 182 PVVNFDHEFAGIVIEAGDLAAPNKMSDPLLRPYTQQLLESWEPSDDVTIVSRVRELIELL 241 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTG ++E VA + +T+ RRLA+ TF+ ++D R E A+R + +SL+ +A Sbjct: 242 LPTGRCSVEQVARSLGVDRRTVHRRLAESGETFSTVLDATRVELAERMVANPRLSLTEIA 301 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAK 329 L ++ S +R FG P+ +R + Sbjct: 302 DMLAFSAPSNFSRWFSGRFGCSPSRWRTQ 330 >tr|Q3KCK3|Q3KCK3_PSEPF Tax_Id=205922 SubName: Full=Putative transcriptional Regulator, AraC family;[Pseudomonas fluorescens] Length = 350 Score = 111 bits (277), Expect = 1e-22 Identities = 80/320 (25%), Positives = 138/320 (43%), Gaps = 4/320 (1%) Query: 4 VRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGTH 63 +R L+ + G +P +LR A + + + + Sbjct: 7 IRAISLTGFDPFARRQGLEPNRMLRQACLSVASLQRPEDILSFRNYCRLLTLCRQRSNNA 66 Query: 64 DFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRSF 123 FG + QG+++ G + L A Y+ A H+ + + Sbjct: 67 LFGLEFGLHQGVDVFGDMFFLIHNTRTVGDALRELRANFALYNGAAHLYLEVADGI--AL 124 Query: 124 VAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFEC 183 + + ELA GV L + + L A + P A+ Y + Sbjct: 125 LGYRADEQEIDGLAQAEELACGVGLRLMQTLASAPWQPEAIMLRHAPLADEGLYRQALNI 184 Query: 184 TPHFAERRSGFTVRSTDLVRPLH-RDELAHRAVVDYLSSITPLGAGIVES-VRTMARQLL 241 TP F+ +G ++ L +PL E+ H+ + ++L+ I L + VR + R LL Sbjct: 185 TPTFSAAHTGLLFNASVLAQPLDCASEVLHQLIAEHLAGIERLSTDAMPGYVRQLLRNLL 244 Query: 242 PTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLAR 301 P+G AT++ VA + P++LQR LA+E+T+F L+DE R++ A +YL+ +SL +A Sbjct: 245 PSGRATIDRVADCMAVTPRSLQRHLAEENTSFQQLLDETRQQLARKYLQVPTISLPQVAH 304 Query: 302 ELGYAEQSVLTRSCKRWFGI 321 LGYA+ S +R+ RWFG+ Sbjct: 305 LLGYADVSTFSRAFHRWFGV 324 >tr|C6BMA1|C6BMA1_RALP1 Tax_Id=428406 SubName: Full=Transcriptional regulator, AraC family;[Ralstonia pickettii] Length = 358 Score = 110 bits (275), Expect = 2e-22 Identities = 83/327 (25%), Positives = 135/327 (41%), Gaps = 4/327 (1%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 +VR L+ Y G DP +L G+ + + D IP G Sbjct: 4 LVRSASLTGYAEAARAGGLDPFRMLAEVGLPADSLSDVDLKIPADKVGRLLELSAQRSGI 63 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 FG ++A+ + LGP+ L + ++ AI + + + Sbjct: 64 ETFGLRMAETRRASNLGPLILLVRDEPTLRQALQAMARYGHLHNEAIFLHVEE--EDGIA 121 Query: 123 FVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFE 182 + E++ D EL +GV + R +G D+ P V + R F Sbjct: 122 VIRDEVLASDVGSLKQATELVVGVLFRLLRFFLGDDWHPKTVLFAHAAPKDRSVHARVFG 181 Query: 183 CTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSSITPLGAG-IVESVRTMARQL 240 F SG ++DL PL D + R V YL+ + P G + + VR M L Sbjct: 182 SNVEFGHAFSGIVCNASDLDLPLPSADPVMARYVRRYLNDLDPEGGKRMSDEVRQMVIML 241 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LP+G AT++ +A ++ +T+ R L E TTF++++D VR E A RYL + ++ Sbjct: 242 LPSGRATVDHIARHLGVNRRTIHRHLTQEGTTFSSILDAVRSELAVRYLDQGERQCAEIS 301 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYR 327 LG++E S TR + FG P ++ Sbjct: 302 GFLGFSEPSAFTRWFRGTFGCSPTQFK 328 >tr|B2UHA2|B2UHA2_RALPJ Tax_Id=402626 SubName: Full=Transcriptional regulator, AraC family;[Ralstonia pickettii] Length = 358 Score = 110 bits (275), Expect = 2e-22 Identities = 83/327 (25%), Positives = 135/327 (41%), Gaps = 4/327 (1%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 +VR L+ Y G DP +L G+ + + D IP G Sbjct: 4 LVRSASLTGYAEAARAGGLDPFRMLAEVGLPADSLSDVDLKIPADKVGRLLELSAQRSGI 63 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 FG ++A+ + LGP+ L + ++ AI + + + Sbjct: 64 ETFGLRMAETRRASNLGPLILLVRDEPTLRQALQAMARYGHLHNEAIFLHVEE--EDGIA 121 Query: 123 FVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFE 182 + E++ D EL +GV + R +G D+ P V + R F Sbjct: 122 VIRDEVLASDVGSLKQATELVVGVLFRLLRFFLGDDWHPKTVLFAHAAPKDRSVHARVFG 181 Query: 183 CTPHFAERRSGFTVRSTDLVRPL-HRDELAHRAVVDYLSSITPLGAG-IVESVRTMARQL 240 F SG ++DL PL D + R V YL+ + P G + + VR M L Sbjct: 182 SNVEFGHAFSGIVCNASDLDLPLPSADPVMARYVRRYLNDLDPEGGKRMSDEVRQMVIML 241 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LP+G AT++ +A ++ +T+ R L E TTF++++D VR E A RYL + ++ Sbjct: 242 LPSGRATVDHIARHLGVNRRTIHRHLTQEGTTFSSILDAVRSELAVRYLDQGERQCAEIS 301 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYR 327 LG++E S TR + FG P ++ Sbjct: 302 GFLGFSEPSAFTRWFRGTFGCSPTQFK 328 >tr|Q1LED5|Q1LED5_RALME Tax_Id=266264 SubName: Full=Transcriptional regulator, AraC family;[Ralstonia metallidurans] Length = 363 Score = 108 bits (271), Expect = 7e-22 Identities = 86/327 (26%), Positives = 138/327 (42%), Gaps = 4/327 (1%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 +VR L+ Y LV LG DP A LR G+ + + N + IP G Sbjct: 11 LVRSASLNGYIELVKSLGYDPRAFLRGVGLSARLLENPETLIPSPAVRELLEVTAQVTGV 70 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 DF +LA R+ LGP+ L ++ S A+ + + Sbjct: 71 EDFALRLAARRTFSNLGPISLVLKEAATPREALDTLCRYLKLLSAALITRVEDVGDAV-- 128 Query: 123 FVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFE 182 + +++P + LELA+GV+ + R L+G + P V Y +F Sbjct: 129 IIREDLLPTPGLSSRQALELAMGVTFRMLRELIGPRWRPQQVCFMHRPPADLSPYRAFFG 188 Query: 183 CTPHFAERRSGFTVRSTDL-VRPLHRDELAHRAVVDYL-SSITPLGAGIVESVRTMARQL 240 P F + +G + DL + + D R DYL +++ GI +S R + + L Sbjct: 189 RNPMFNQPFNGMVCAAADLSMSRMPDDPGVARFARDYLEAALRHREIGIRDSCRELVQAL 248 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LP G T + VA + +TL R L+ E TF+ L+ EVR E R+L + + + +A Sbjct: 249 LPGGRCTADQVARHLGVDRRTLHRYLSAEGLTFSTLLHEVRSELVMRHLLESDLPMGEVA 308 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYR 327 LG++ QS + + FG +R Sbjct: 309 GLLGFSAQSSFSHWFQTVFGCSATDWR 335 >tr|B0KU45|B0KU45_PSEPG Tax_Id=76869 SubName: Full=Transcriptional regulator, AraC family;[Pseudomonas putida] Length = 335 Score = 108 bits (269), Expect = 1e-21 Identities = 91/332 (27%), Positives = 142/332 (42%), Gaps = 8/332 (2%) Query: 2 SVVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXG 61 ++VR L+NY + LG +P ALL G+ + + + IP Sbjct: 3 ALVRAASLTNYLEVSRHLGLNPHALLAQVGLNAALLDDPNRRIPVASVISLLEASASATK 62 Query: 62 THDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQR 121 FG ++A+ + + G + L + + + A+ I I T Sbjct: 63 CESFGLRMAELRQLSDFGEISLLLSHQRNLRDALQVIVQYRHLLNDALAIHIEEAGKT-- 120 Query: 122 SFVAIEIVPDDPIPCPH-TLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRY 180 + E V ++ PC ELA+GV + + L+GA + P++ + R Sbjct: 121 -VIIREEVINERAPCSRQATELAIGVMMRLCAALLGAHWHPISANFTHAAPADPAIHRRI 179 Query: 181 FECTPHFAERRSGFTVRSTDL--VRPLHRDELAHRAVVDYLSSITPLGAGIVE-SVRTMA 237 F CT F +G + DL P + +A R YL ++ G +E +R Sbjct: 180 FGCTLVFGSEFNGIVCPAADLDSASPQANEAMA-RLARRYLDTLPASGVPSLELELRKTI 238 Query: 238 RQLLPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLS 297 LLP G AT+E VA ++ +TLQRRL + TF LI+ VR++ RYL SL Sbjct: 239 YLLLPMGRATIEQVAQTQGMNVRTLQRRLEENGLTFKDLINNVRRDLVMRYLENPGYSLG 298 Query: 298 HLARELGYAEQSVLTRSCKRWFGIGPAAYRAK 329 +A LGY+ S TR FG+ PA +RA+ Sbjct: 299 RIADMLGYSMPSSFTRWFIAQFGMPPAVWRAQ 330 >tr|C3JPZ5|C3JPZ5_RHOER Tax_Id=596309 SubName: Full=Transcriptional regulator, AraC family;[Rhodococcus erythropolis SK121] Length = 334 Score = 106 bits (264), Expect = 5e-21 Identities = 77/332 (23%), Positives = 142/332 (42%), Gaps = 4/332 (1%) Query: 3 VVRGTGLSNYPNLVSELGGDPAALLRAAGVREQDVGNYDAFIPXXXXXXXXXXXXXXXGT 62 + R L+ Y +L + D AL+R+ G+ + N D ++P G Sbjct: 4 LARYASLNRYVDLCRTVDVDAVALMRSVGLSPASLANPDQWVPAASIASLLERSAAESGH 63 Query: 63 HDFGRQLAQRQGIEILGPVGXXXXXXXXXXXXLMIFHTFMAAYSPAIHIEITPLAHTQRS 122 DFG LA + + LGP+ L + + Y+ ++ I + + Sbjct: 64 EDFGLLLAGLRRLSNLGPLSLVIREEPDVRSALDVLMRYEHTYNESLRIRLNEVNGLATL 123 Query: 123 FVAIEIVPDDPIPCPHTLELALGVSLGVFRLLMGADYTPLAVXXXXXXXXXXXXYVRYFE 182 +++E+ +P+ ++ELA+G +L + R +G+ + P++V + R Sbjct: 124 RISLEV--GEPVDTRQSVELAVGATLQILRSFLGSRWHPVSVGFTHNAPKDTSTHRRILG 181 Query: 183 CTPHFAERRSGFTVRSTDLVRPLH-RDELAHRAVVDYLSSITPLGAG-IVESVRTMARQL 240 T F +G + DL DEL +L S+ + + + L Sbjct: 182 ETVEFDHEFTGIVFFAADLDAANQLSDELLRPYARQFLDSLPASETSDTLSRTKELIEVL 241 Query: 241 LPTGAATLEVVAAQFHLHPKTLQRRLADESTTFAALIDEVRKETADRYLRTTAMSLSHLA 300 LPTG ++E VA +TL R LA+ TF A+++ VR A+R++ SL+ +A Sbjct: 242 LPTGRCSVEQVARSLGFDRRTLHRHLAESGDTFTAVLNSVRSSLAERFVSNPRYSLTEVA 301 Query: 301 RELGYAEQSVLTRSCKRWFGIGPAAYRAKTRV 332 LG++ Q +R + F + P+A+R + + Sbjct: 302 VHLGFSTQGSFSRWFRTQFSMSPSAWRTQRSI 333 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.324 0.137 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 2,108,618,175 Number of extensions: 73637565 Number of successful extensions: 227838 Number of sequences better than 10.0: 4102 Number of HSP's gapped: 228811 Number of HSP's successfully gapped: 4108 Length of query: 339 Length of database: 3,846,993,858 Length adjustment: 138 Effective length of query: 201 Effective length of database: 2,291,015,844 Effective search space: 460494184644 Effective search space used: 460494184644 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.5 bits) S2: 80 (35.4 bits)