BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MMAR_5392
         (409 letters)

Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr;
Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr;
trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr;
Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr;
Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr;
Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr;
Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr;
Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr;
Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr;
Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr;
Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr;
Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 
           11,275,203 sequences; 3,846,993,858 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits)  Value

tr|B2HMM7|B2HMM7_MYCMM Tax_Id=216594 SubName: Full=Transcription...   597   e-169
tr|A0PX19|A0PX19_MYCUA Tax_Id=362242 SubName: Full=Transcription...   583   e-164
tr|Q745J4|Q745J4_MYCPA Tax_Id=1770 SubName: Full=Putative unchar...   413   e-113
tr|A0Q992|A0Q992_MYCA1 Tax_Id=243243 SubName: Full=Transcription...   412   e-113
tr|A3Q7Q4|A3Q7Q4_MYCSJ Tax_Id=164757 SubName: Full=Cell envelope...   399   e-109
tr|Q1B1U2|Q1B1U2_MYCSS Tax_Id=164756 SubName: Full=Cell envelope...   399   e-109
tr|A1UNA7|A1UNA7_MYCSK Tax_Id=189918 SubName: Full=Cell envelope...   399   e-109
tr|A4T6G5|A4T6G5_MYCGI Tax_Id=350054 SubName: Full=Cell envelope...   392   e-107
tr|A0R646|A0R646_MYCS2 Tax_Id=246196 SubName: Full=Transcription...   383   e-104
tr|A1TGY0|A1TGY0_MYCVP Tax_Id=350058 SubName: Full=Cell envelope...   377   e-102
tr|B1MEG4|B1MEG4_MYCA9 Tax_Id=561007 SubName: Full=Possible tran...   339   3e-91
tr|C3JR11|C3JR11_RHOER Tax_Id=596309 SubName: Full=Transcription...   320   3e-85
tr|C0ZLR4|C0ZLR4_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR...   319   4e-85
tr|C1B901|C1B901_RHOOB Tax_Id=632772 SubName: Full=Putative LytR...   317   2e-84
tr|Q0S9G0|Q0S9G0_RHOSR Tax_Id=101510 SubName: Full=Probable tran...   313   3e-83
tr|Q5Z3M0|Q5Z3M0_NOCFA Tax_Id=37329 SubName: Full=Putative trans...   300   2e-79
tr|C4LLQ8|C4LLQ8_CORK4 Tax_Id=645127 (lytR1)SubName: Full=Putati...   290   3e-76
tr|C2AIG9|C2AIG9_TSUPA Tax_Id=521096 SubName: Full=Cell envelope...   284   1e-74
tr|D1ACP3|D1ACP3_THECU Tax_Id=471852 SubName: Full=Cell envelope...   277   2e-72
tr|C2BIZ3|C2BIZ3_9CORY Tax_Id=525264 SubName: Full=Transcription...   275   6e-72
tr|C6R7F2|C6R7F2_9CORY Tax_Id=553206 SubName: Full=Transcription...   273   4e-71
tr|C6WBH2|C6WBH2_ACTMD Tax_Id=446462 SubName: Full=Cell envelope...   270   3e-70
tr|Q8FLW3|Q8FLW3_COREF Tax_Id=152794 SubName: Full=Putative unch...   267   2e-69
tr|C8NJE3|C8NJE3_COREF Tax_Id=196164 SubName: Full=Transcription...   267   2e-69
tr|C8NY97|C8NY97_9CORY Tax_Id=585529 SubName: Full=Transcription...   266   4e-69
tr|A4FN51|A4FN51_SACEN Tax_Id=405948 SubName: Full=Probable tran...   263   2e-68
tr|A4FD71|A4FD71_SACEN Tax_Id=405948 SubName: Full=Probable tran...   263   2e-68
tr|Q8NLN8|Q8NLN8_CORGL Tax_Id=1718 SubName: Full=Transcriptional...   262   5e-68
tr|Q6M1W2|Q6M1W2_CORGL Tax_Id=1718 SubName: Full=Cell envelope-r...   262   5e-68
tr|C2CRD8|C2CRD8_CORST Tax_Id=525268 SubName: Full=Transcription...   262   7e-68
tr|C0WG87|C0WG87_9CORY Tax_Id=525260 SubName: Full=Transcription...   262   7e-68
tr|C0XNM6|C0XNM6_9CORY Tax_Id=525263 SubName: Full=Transcription...   259   4e-67
tr|Q4JY39|Q4JY39_CORJK Tax_Id=306537 SubName: Full=Putative unch...   258   1e-66
tr|C8RSW0|C8RSW0_CORJE Tax_Id=525262 SubName: Full=Transcription...   258   1e-66
tr|A4QHU8|A4QHU8_CORGB Tax_Id=340322 SubName: Full=Putative unch...   255   8e-66
tr|C3PK90|C3PK90_CORA7 Tax_Id=548476 (lytR1)SubName: Full=Transc...   253   3e-65
tr|C2GL73|C2GL73_9CORY Tax_Id=548478 SubName: Full=Transcription...   253   3e-65
tr|C0VWM9|C0VWM9_9CORY Tax_Id=548477 SubName: Full=Transcription...   253   3e-65
tr|A4FG61|A4FG61_SACEN Tax_Id=405948 SubName: Full=Probable tran...   252   5e-65
tr|B1VE97|B1VE97_CORU7 Tax_Id=504474 (lytR1)SubName: Full=Putati...   251   9e-65
tr|Q47LS2|Q47LS2_THEFY Tax_Id=269800 SubName: Full=Cell envelope...   249   6e-64
tr|Q6NEM2|Q6NEM2_CORDI Tax_Id=1717 SubName: Full=Putative membra...   247   2e-63
tr|C7MT33|C7MT33_SACVD Tax_Id=471857 SubName: Full=Cell envelope...   247   2e-63
tr|C5V8N8|C5V8N8_9CORY Tax_Id=553207 SubName: Full=Transcription...   247   2e-63
tr|C0E5U0|C0E5U0_9CORY Tax_Id=566549 SubName: Full=Putative unch...   247   2e-63
tr|D0LB89|D0LB89_GORB4 Tax_Id=526226 SubName: Full=Cell envelope...   246   4e-63
tr|C4ENX4|C4ENX4_STRRS Tax_Id=479432 SubName: Full=Cell envelope...   244   1e-62
tr|C1YKP0|C1YKP0_NOCDA Tax_Id=446468 SubName: Full=Cell envelope...   236   3e-60
tr|C7QG42|C7QG42_CATAD Tax_Id=479433 SubName: Full=Cell envelope...   220   2e-55
tr|C7NFG6|C7NFG6_KYTSD Tax_Id=478801 SubName: Full=Cell envelope...   217   2e-54

>tr|B2HMM7|B2HMM7_MYCMM Tax_Id=216594 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium marinum]
          Length = 409

 Score =  597 bits (1540), Expect = e-169
 Identities = 310/409 (75%), Positives = 311/409 (76%)

Query: 1   VNGDXXXXXXXXXXXXXXXXXXSQVIRRDTLPLRRPAEPTGTPPHQXXXXXXXXXXXXXX 60
           +NGD                  SQVIRRDTLPLRRPAEPTGTPPHQ              
Sbjct: 1   MNGDRPAQFRRPQPPIPPQSEPSQVIRRDTLPLRRPAEPTGTPPHQPTSAPPPPRPATGP 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGKIVXXXXXXXXXXXXXXXXXXXXXXDT 120
                                          WGKIV                      DT
Sbjct: 61  VGPRRRRRTPAPAPPPRPAAPKARRKKTKRRWGKIVALSLLTAVLLAGAGILGGALWLDT 120

Query: 121 ALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVH 180
           ALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQREL             ILLVH
Sbjct: 121 ALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELTTGGDPGDGRTDTILLVH 180

Query: 181 LAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAE 240
           LAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAE
Sbjct: 181 LAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAE 240

Query: 241 IGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLD 300
           IGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLD
Sbjct: 241 IGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLD 300

Query: 301 RMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGH 360
           RMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGH
Sbjct: 301 RMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGH 360

Query: 361 PTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGPP 409
           PTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGPP
Sbjct: 361 PTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGPP 409


>tr|A0PX19|A0PX19_MYCUA Tax_Id=362242 SubName: Full=Transcriptional
           regulatory protein;[Mycobacterium ulcerans]
          Length = 409

 Score =  583 bits (1502), Expect = e-164
 Identities = 303/409 (74%), Positives = 307/409 (75%)

Query: 1   VNGDXXXXXXXXXXXXXXXXXXSQVIRRDTLPLRRPAEPTGTPPHQXXXXXXXXXXXXXX 60
           +NGD                  SQVIRRDTLPLRRPAEP+G PP Q              
Sbjct: 1   MNGDRPAQFRRPQPPIPPQSEPSQVIRRDTLPLRRPAEPSGAPPRQPTSAPPPPKPATGP 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGKIVXXXXXXXXXXXXXXXXXXXXXXDT 120
                                          WGKIV                      DT
Sbjct: 61  VGPRRRRRTPTPAPPPRPAAPKARRKKTERRWGKIVALSLLTAVLLAGAGILGGALWLDT 120

Query: 121 ALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVH 180
           ALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQ+EL             ILLVH
Sbjct: 121 ALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQQELTTGGDPGDGRTDTILLVH 180

Query: 181 LAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAE 240
           LAGLGSSTPTALVSIPRDSYVPV GYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAE
Sbjct: 181 LAGLGSSTPTALVSIPRDSYVPVRGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAE 240

Query: 241 IGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLD 300
           IGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLD
Sbjct: 241 IGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLD 300

Query: 301 RMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGH 360
           RMINQRQFMSALLRRAE+PAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGH
Sbjct: 301 RMINQRQFMSALLRRAENPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGH 360

Query: 361 PTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGPP 409
           PTAL VPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGPP
Sbjct: 361 PTALAVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGPP 409


>tr|Q745J4|Q745J4_MYCPA Tax_Id=1770 SubName: Full=Putative
           uncharacterized protein;[Mycobacterium paratuberculosis]
          Length = 401

 Score =  413 bits (1061), Expect = e-113
 Identities = 201/288 (69%), Positives = 229/288 (79%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           DT LHREPVL DY  RP PGRG+NWLIVGSDSRQGL+ EQQ++L             ILL
Sbjct: 108 DTKLHREPVLADYPGRPEPGRGSNWLIVGSDSRQGLSAEQQQQLATGGDIGDGRTDTILL 167

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VHL G+GS     +VSIPRDSYVP+P +G+DKINAAFA+GGA LLV+TVEQATGLRI HY
Sbjct: 168 VHLPGVGSGVAPTMVSIPRDSYVPIPEHGKDKINAAFAMGGATLLVRTVEQATGLRIAHY 227

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGFGGF  LVDALGGVR+C   P+ DPLAG+DL  GCQ LDGR+ALGYVRSR TPRAD
Sbjct: 228 AEIGFGGFTALVDALGGVRVCSQAPMHDPLAGLDLPAGCQTLDGRNALGYVRSRDTPRAD 287

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRM+NQRQF++ALL RA SP VWLNPWRWY+ PRA A ALTVD+  H +DLARLGWALH
Sbjct: 288 LDRMVNQRQFVAALLHRAASPTVWLNPWRWYAAPRAVADALTVDRADHAWDLARLGWALH 347

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFD 406
           G P  +TVPIGEFT+ D GSVVVW+H  AA +FDAL+SD  +PA + D
Sbjct: 348 GSPATVTVPIGEFTSGDAGSVVVWDHARAARLFDALSSDGQLPAGSTD 395


>tr|A0Q992|A0Q992_MYCA1 Tax_Id=243243 SubName: Full=Transcriptional
           regulator;[Mycobacterium avium]
          Length = 317

 Score =  412 bits (1059), Expect = e-113
 Identities = 201/288 (69%), Positives = 230/288 (79%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           DT LHREPVL DY  RP PGRG+NWLIVGSDSRQGL+ EQQ++L             ILL
Sbjct: 24  DTKLHREPVLADYPGRPEPGRGSNWLIVGSDSRQGLSAEQQQQLATGGDIGDGRTDTILL 83

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VHL G+GS     +VSIPRDSYVP+P +G+DKINAAFA+GGA LLV+TVEQATGLRI HY
Sbjct: 84  VHLPGVGSGVAPTMVSIPRDSYVPIPEHGKDKINAAFAMGGATLLVRTVEQATGLRIAHY 143

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGFGGFA LVDALGGVR+C   P+ DPLAG+DL  GCQ LDGR+AL YVRSR TPRAD
Sbjct: 144 AEIGFGGFAALVDALGGVRVCPQAPMHDPLAGLDLPAGCQTLDGRNALAYVRSRDTPRAD 203

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRM+NQRQF++ALL RA SPAVWLNPWRWY+ PRA A +LTVD+  H +DLARLGWALH
Sbjct: 204 LDRMVNQRQFVAALLHRAASPAVWLNPWRWYAAPRAVADSLTVDRADHAWDLARLGWALH 263

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFD 406
           G P  +TVPIGEFT+ D GSVVVW+H  AA +FDAL+SD  +PA + D
Sbjct: 264 GSPATVTVPIGEFTSGDAGSVVVWDHARAARLFDALSSDGQLPAGSTD 311


>tr|A3Q7Q4|A3Q7Q4_MYCSJ Tax_Id=164757 SubName: Full=Cell
           envelope-related transcriptional attenuator; Flags:
           Precursor;[Mycobacterium sp.]
          Length = 311

 Score =  399 bits (1026), Expect = e-109
 Identities = 197/291 (67%), Positives = 223/291 (76%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           DT+L R P L  Y DRP  GRGT WL+VGSDSR GL  EQQ +L             I+L
Sbjct: 19  DTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQAQLATGGDVGNGRTDTIML 78

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VHL GL SS P  +VSIPRDSYVP+PGYG DKINAAFA+GGAPLL QTVEQATG+R+DHY
Sbjct: 79  VHLPGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGAPLLAQTVEQATGMRLDHY 138

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AE+GF GFA +VDA+GGV MC  EPI DPLAGIDL  GCQ+LDGR+ALG+VR+RATPRAD
Sbjct: 139 AEVGFDGFASVVDAVGGVTMCPAEPINDPLAGIDLPAGCQELDGRNALGFVRTRATPRAD 198

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRM +QR+FMSALL RA SPAV LNP RWY +  AA  ALTVD GAHV+DLARLGWAL 
Sbjct: 199 LDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALTVDTGAHVWDLARLGWALR 258

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGPP 409
           G  T  TVPIGEFT    G+VVVW+ +AA  +FDAL++DTPIPAD  D  P
Sbjct: 259 GDLTTTTVPIGEFTNGGAGAVVVWDSEAAGRLFDALSTDTPIPADVLDTTP 309


>tr|Q1B1U2|Q1B1U2_MYCSS Tax_Id=164756 SubName: Full=Cell
           envelope-related transcriptional
           attenuator;[Mycobacterium sp.]
          Length = 311

 Score =  399 bits (1025), Expect = e-109
 Identities = 197/291 (67%), Positives = 223/291 (76%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           DT+L R P L  Y DRP  GRGT WL+VGSDSR GL  EQQ +L             I+L
Sbjct: 19  DTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQAQLATGGDVGNGRTDTIML 78

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VHL GL SS P  +VSIPRDSYVP+PGYG DKINAAFA+GGAPLL QTVEQATG+R+DHY
Sbjct: 79  VHLPGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGAPLLAQTVEQATGMRLDHY 138

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AE+GF GFA +VDA+GGV MC  EPI DPLAGIDL  GCQ+LDGR+ALG+VR+RATPRAD
Sbjct: 139 AEVGFDGFASVVDAVGGVTMCPAEPINDPLAGIDLPAGCQELDGRNALGFVRTRATPRAD 198

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRM +QR+FMSALL RA SPAV LNP RWY +  AA  ALTVD GAHV+DLARLGWAL 
Sbjct: 199 LDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALTVDTGAHVWDLARLGWALR 258

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGPP 409
           G  T  TVPIGEFT    G+VVVW+ +AA  +FDAL++DTPIPAD  D  P
Sbjct: 259 GDLTTTTVPIGEFTDGGAGAVVVWDSEAAGRLFDALSTDTPIPADVLDTTP 309


>tr|A1UNA7|A1UNA7_MYCSK Tax_Id=189918 SubName: Full=Cell
           envelope-related transcriptional attenuator; Flags:
           Precursor;[Mycobacterium sp.]
          Length = 311

 Score =  399 bits (1025), Expect = e-109
 Identities = 197/291 (67%), Positives = 223/291 (76%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           DT+L R P L  Y DRP  GRGT WL+VGSDSR GL  EQQ +L             I+L
Sbjct: 19  DTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQAQLATGGDVGNGRTDTIML 78

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VHL GL SS P  +VSIPRDSYVP+PGYG DKINAAFA+GGAPLL QTVEQATG+R+DHY
Sbjct: 79  VHLPGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGAPLLAQTVEQATGMRLDHY 138

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AE+GF GFA +VDA+GGV MC  EPI DPLAGIDL  GCQ+LDGR+ALG+VR+RATPRAD
Sbjct: 139 AEVGFDGFASVVDAVGGVTMCPAEPINDPLAGIDLPAGCQELDGRNALGFVRTRATPRAD 198

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRM +QR+FMSALL RA SPAV LNP RWY +  AA  ALTVD GAHV+DLARLGWAL 
Sbjct: 199 LDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALTVDTGAHVWDLARLGWALR 258

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGPP 409
           G  T  TVPIGEFT    G+VVVW+ +AA  +FDAL++DTPIPAD  D  P
Sbjct: 259 GDLTTTTVPIGEFTDGGAGAVVVWDSEAAGRLFDALSTDTPIPADVLDTTP 309


>tr|A4T6G5|A4T6G5_MYCGI Tax_Id=350054 SubName: Full=Cell
           envelope-related transcriptional
           attenuator;[Mycobacterium gilvum]
          Length = 409

 Score =  392 bits (1006), Expect = e-107
 Identities = 193/288 (67%), Positives = 220/288 (76%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D++L R P L DYA RP  G GT WL+VGSD R+GLT EQQ EL             ILL
Sbjct: 118 DSSLSRLPALTDYAGRPPAGAGTTWLLVGSDGREGLTPEQQAELTTGGDLGASRTDTILL 177

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VHL G+GSSTP  +VSIPRDSYVP+P YG DKINAAF++GG PLL QTVEQATGLRIDHY
Sbjct: 178 VHLPGIGSSTPATMVSIPRDSYVPIPEYGSDKINAAFSLGGPPLLAQTVEQATGLRIDHY 237

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AE+GFGGFA +VDA+GGV +C  EPI DPLAGIDL  GCQ+LDGR+ALGYVRSRAT RAD
Sbjct: 238 AEVGFGGFAGMVDAVGGVTVCPAEPINDPLAGIDLPAGCQELDGRNALGYVRSRATARAD 297

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRM NQRQFMSAL+ RA SPAV LNP RWY +  AAA  + VD G HV+DLARLGWAL 
Sbjct: 298 LDRMANQRQFMSALIERASSPAVLLNPLRWYPLASAAADTVAVDDGDHVWDLARLGWALR 357

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFD 406
           G  T +TVPIGEFT    GS+VVW+ + A  +F ALASD+P+PAD  +
Sbjct: 358 GDVTTVTVPIGEFTENSAGSIVVWDSETAQRLFAALASDSPVPADVLE 405


>tr|A0R646|A0R646_MYCS2 Tax_Id=246196 SubName: Full=Transcriptional
           regulator;[Mycobacterium smegmatis]
          Length = 623

 Score =  383 bits (983), Expect = e-104
 Identities = 186/288 (64%), Positives = 217/288 (75%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           DT+L R P L  Y +RP  GRGT WL+VGSDSR+GLT EQQ  L             ILL
Sbjct: 332 DTSLQRIPALAGYPERPAAGRGTTWLLVGSDSREGLTPEQQASLTTGGDLGTGRTDTILL 391

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+  LGSSTP  +VSIPRDSYV +PGYG DKINAAFA+GGAPLL QTVE ATGLR+DHY
Sbjct: 392 VHIPALGSSTPATMVSIPRDSYVEIPGYGEDKINAAFALGGAPLLAQTVESATGLRLDHY 451

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGFGGFA LVDA+GGV +C  EPI DPLAGIDL  GCQ+LDGR+ALG+VR+RAT RAD
Sbjct: 452 AEIGFGGFASLVDAVGGVTVCPAEPISDPLAGIDLPAGCQELDGRTALGFVRTRATARAD 511

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRMI+QR+FMS LL RA SPAVWLNP RW  + RAA   L VD+ AHV++LARL W+L 
Sbjct: 512 LDRMIHQREFMSGLLHRAASPAVWLNPLRWSPMMRAATGTLAVDEDAHVWNLARLAWSLR 571

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFD 406
           G P  +TVPIGEF +   G VV+W+ DAA  +F+AL +D P+P D  +
Sbjct: 572 GDPVTMTVPIGEFGSNGSGDVVMWDSDAAPRLFEALRTDAPVPPDVLE 619


>tr|A1TGY0|A1TGY0_MYCVP Tax_Id=350058 SubName: Full=Cell
           envelope-related transcriptional
           attenuator;[Mycobacterium vanbaalenii]
          Length = 306

 Score =  377 bits (967), Expect = e-102
 Identities = 189/288 (65%), Positives = 216/288 (75%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D+AL R   L DY+DRP  G GT WL+VGSD R+GLT EQQ EL             IL+
Sbjct: 15  DSALTRISALTDYSDRPAQGEGTTWLLVGSDGREGLTPEQQAELATGGDLGASRTDTILV 74

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VHL GLGS+TP  +VSIPRDSYV +P YG DKINAAF++GG  LL +TVE ATGLRIDHY
Sbjct: 75  VHLPGLGSATPATMVSIPRDSYVSIPEYGSDKINAAFSVGGPRLLARTVELATGLRIDHY 134

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGFGGFAELVDA+GGV MC   PI DPLAGIDL  GCQ+LDGR+ALGYVRSRAT RAD
Sbjct: 135 AEIGFGGFAELVDAVGGVTMCPEAPISDPLAGIDLPAGCQRLDGRTALGYVRSRATARAD 194

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRM NQRQFMSAL+ RA SP V LNP +WY + RAAA  +TV+ G H++DLARL WAL 
Sbjct: 195 LDRMANQRQFMSALVDRAASPTVLLNPLKWYPMARAAADTVTVNDGDHIWDLARLAWALR 254

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFD 406
           G    +TVPIGEFT    GS+VVW+ +AA  +F ALASDTP+P D  D
Sbjct: 255 GDIVNVTVPIGEFTENGSGSIVVWDSEAAQRLFGALASDTPVPQDVLD 302


>tr|B1MEG4|B1MEG4_MYCA9 Tax_Id=561007 SubName: Full=Possible
           transcriptional regulator;[Mycobacterium abscessus]
          Length = 313

 Score =  339 bits (870), Expect = 3e-91
 Identities = 167/290 (57%), Positives = 203/290 (70%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D  LH    L+DY DRP  G GTNWL+VGSDSRQGLT +Q+ +L             ILL
Sbjct: 19  DGRLHHVDALKDYPDRPATGSGTNWLLVGSDSRQGLTPDQETQLATGGDIGDGRTDTILL 78

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+          +VS+PRDSYV +P  G +K+NAA+++GG  LL +TVE+ATGLRIDHY
Sbjct: 79  VHIPAFYDGGAATMVSLPRDSYVSIPENGSNKLNAAYSLGGPALLTRTVEEATGLRIDHY 138

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGF GFA +VDA+GGV MCL EPI DPLAGIDL PGCQ L+G SALGYVRSRATPRAD
Sbjct: 139 AEIGFNGFASVVDAIGGVSMCLDEPIQDPLAGIDLTPGCQILNGPSALGYVRSRATPRAD 198

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRM +QR FMSAL  R  SPAVW NP+RWY V  + A A+T+ +G H ++LA+LGWAL 
Sbjct: 199 LDRMTHQRAFMSALFHRVSSPAVWANPFRWYPVATSTADAITLAEGDHSWNLAQLGWALA 258

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGP 408
           G    LT+PIG F+    G +V W+ DA++ +FDAL +   IPAD    P
Sbjct: 259 GSVQNLTMPIGSFSENWAGDIVTWDQDASSRLFDALRTGQQIPADLLPDP 308


>tr|C3JR11|C3JR11_RHOER Tax_Id=596309 SubName: Full=Transcriptional
           regulator; Flags: Fragment;[Rhodococcus erythropolis
           SK121]
          Length = 341

 Score =  320 bits (819), Expect = 3e-85
 Identities = 166/286 (58%), Positives = 204/286 (71%), Gaps = 4/286 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D++L+R   L DYA R     GTNWLIVGSDSR+GLT EQ++ L             ++L
Sbjct: 54  DSSLNRIDALPDYAGRVAGTPGTNWLIVGSDSREGLTPEQEQALATGGDTGPKRTDTVIL 113

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+   G +T   +VSIPRDSYVP+PGYG DKINAAFA GGAPLLVQTVE+ATGLRIDHY
Sbjct: 114 VHVPKSGKTT---MVSIPRDSYVPIPGYGSDKINAAFAFGGAPLLVQTVEEATGLRIDHY 170

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGF GFA +VDA+GGV +CL +PI DPLAGI+L  GCQ L G  ALG+VR+RAT  AD
Sbjct: 171 AEIGFSGFAGIVDAVGGVNVCLAQPIDDPLAGINLPAGCQDLKGSDALGFVRTRATALAD 230

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRM NQRQFMSALL +A SP  +LNP+R + +    A +L VD+G H+++LA L WAL 
Sbjct: 231 LDRMNNQRQFMSALLSKATSPTTFLNPFRLWPLVSDTAKSLQVDEGDHIWNLASLAWALR 290

Query: 359 GHPTALTVPIGEFTTTD-VGSVVVWNHDAAAEMFDALASDTPIPAD 403
           G  T  TVP+  F   D  G+V++W+   A++ FDALA+D  IP D
Sbjct: 291 GGMTTTTVPVAGFEDVDGSGNVLLWDKARASQFFDALANDQQIPQD 336


>tr|C0ZLR4|C0ZLR4_RHOE4 Tax_Id=234621 SubName: Full=Putative LytR
           family regulatory protein;[Rhodococcus erythropolis]
          Length = 303

 Score =  319 bits (818), Expect = 4e-85
 Identities = 166/286 (58%), Positives = 205/286 (71%), Gaps = 4/286 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D++L+R   L DYA R     GTNWLIVGSDSR+GLT EQ++ L             ++L
Sbjct: 16  DSSLNRIDALPDYAGRVADTPGTNWLIVGSDSREGLTPEQEQALATGGDTGPKRTDTVIL 75

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+   G +T   +VSIPRDSYVP+PGYG DKINAAFA GGAPLLVQTVE+ATGLRIDHY
Sbjct: 76  VHVPKSGKTT---MVSIPRDSYVPIPGYGSDKINAAFAFGGAPLLVQTVEEATGLRIDHY 132

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGF GFA +VDA+GGV +CLT+ I DPLAGI+L  GCQ L G  ALG+VR+RAT  AD
Sbjct: 133 AEIGFSGFAGIVDAVGGVNVCLTQAIDDPLAGINLPAGCQDLKGSDALGFVRTRATALAD 192

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDRM NQRQFMSALL +A SP+ +LNP+R + +    A +L VD+G H+++LA L WAL 
Sbjct: 193 LDRMNNQRQFMSALLSKATSPSTFLNPFRLWPLVSDTAKSLQVDEGDHIWNLASLAWALR 252

Query: 359 GHPTALTVPIGEFTTTD-VGSVVVWNHDAAAEMFDALASDTPIPAD 403
           G  T  TVP+  F   D  G+V++W+   A++ FDALA+D  IP D
Sbjct: 253 GGMTTTTVPVAGFEDVDGSGNVLLWDKARASQFFDALANDQQIPQD 298


>tr|C1B901|C1B901_RHOOB Tax_Id=632772 SubName: Full=Putative LytR
           family regulatory protein;[Rhodococcus opacus]
          Length = 406

 Score =  317 bits (812), Expect = 2e-84
 Identities = 159/286 (55%), Positives = 203/286 (70%), Gaps = 3/286 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D++L+R   L DY  R G   GTNWL+VGSDSR GLT EQ+++L             I++
Sbjct: 117 DSSLNRIDALADYPGRIGDTPGTNWLLVGSDSRTGLTPEQEQQLSTGGNSGPDRTDTIIV 176

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+   G   P  +VSIPRDSYV +PGYG DKINA+FA GG  LL QTVE+A+GL IDHY
Sbjct: 177 VHVPSGGG--PATMVSIPRDSYVSIPGYGEDKINASFAFGGPQLLTQTVEEASGLHIDHY 234

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGFGGFA +VDA+GGV MCL   I DPLAGI+LAPGCQ+L G  ALG+VRSRAT  AD
Sbjct: 235 AEIGFGGFAGIVDAIGGVDMCLDTAIDDPLAGINLAPGCQELSGAQALGFVRSRATALAD 294

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           +DRM +QR FM+AL+ +A SPA WLNP+R + +    AA+L VD+  H+++LA L WA+ 
Sbjct: 295 IDRMNHQRMFMAALMSKATSPATWLNPFRVWPLVTDTAASLRVDESDHIWNLAALAWAVR 354

Query: 359 GHPTALTVPIGEFTTTD-VGSVVVWNHDAAAEMFDALASDTPIPAD 403
           G     TVP+G F   D  G+V++W+HD A++ FDALA+D  +PA+
Sbjct: 355 GDMVTTTVPVGGFEDVDGAGNVLLWDHDRASQFFDALANDRQVPAE 400


>tr|Q0S9G0|Q0S9G0_RHOSR Tax_Id=101510 SubName: Full=Probable
           transcriptional regulator, LytR family
           protein;[Rhodococcus sp.]
          Length = 403

 Score =  313 bits (802), Expect = 3e-83
 Identities = 158/286 (55%), Positives = 201/286 (70%), Gaps = 3/286 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D++L+R   L DY  R     GTNWL+VGSDSR GLT EQ++EL             I++
Sbjct: 114 DSSLNRIDALADYPGRIDDTPGTNWLLVGSDSRTGLTPEQEQELSTGGNSGPDRTDTIIV 173

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+   G   P  +VSIPRDSYV +PGYG DKINA+FA GG  LL QTVE+A+GL IDHY
Sbjct: 174 VHVPSGGG--PATMVSIPRDSYVSIPGYGEDKINASFAFGGPQLLTQTVEEASGLHIDHY 231

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGFGGFA +VDA+GGV MCL   I DPLAGI+LAPGCQ+L G  ALG+VRSRAT  AD
Sbjct: 232 AEIGFGGFAGIVDAIGGVDMCLDTAIDDPLAGINLAPGCQELSGAQALGFVRSRATALAD 291

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           +DRM +QR FM+AL+ +A SPA WLNP+R + +    AA+L VD+  H++ LA L WA+ 
Sbjct: 292 IDRMNHQRMFMAALMSKATSPATWLNPFRVWPLVTDTAASLRVDESDHIWHLAALAWAVR 351

Query: 359 GHPTALTVPIGEFTTTD-VGSVVVWNHDAAAEMFDALASDTPIPAD 403
           G     TVP+G F   D  G+V++W+H+ A++ FDALA+D  +PA+
Sbjct: 352 GDMVTTTVPVGGFEDVDGAGNVLLWDHERASQFFDALANDRQVPAE 397


>tr|Q5Z3M0|Q5Z3M0_NOCFA Tax_Id=37329 SubName: Full=Putative
           transcriptional regulator;[Nocardia farcinica]
          Length = 443

 Score =  300 bits (768), Expect = 2e-79
 Identities = 157/286 (54%), Positives = 195/286 (68%), Gaps = 4/286 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D  L R   L  YADR G   GTNWL+VGSD R GLT EQ++EL             I+L
Sbjct: 157 DGKLTRIDALAGYADRVGDTPGTNWLLVGSDGRGGLTAEQEQELATGGEVGPERTDTIML 216

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+   G +T   LVS+PRDSYV +PG+GRDK+NA+FA+GG  LLVQTVE ATGLRIDHY
Sbjct: 217 VHIPRSGKTT---LVSLPRDSYVSIPGHGRDKLNASFALGGPQLLVQTVEIATGLRIDHY 273

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           A+IGF GFA +VD LGG+ +CL + I DPLAGIDL  GCQ+LDG  ALG+VR+RAT  AD
Sbjct: 274 AQIGFAGFANVVDTLGGIEVCLPQAIDDPLAGIDLPAGCQELDGPQALGFVRTRATALAD 333

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           +DRM NQR FMSALL +A S +   NP+  + +    A +L VD+G H++DL RLGWA+ 
Sbjct: 334 IDRMNNQRLFMSALLEKATSASTLANPFTLWPLASDIARSLKVDEGDHLWDLGRLGWAMR 393

Query: 359 GHPTALTVPIGEF-TTTDVGSVVVWNHDAAAEMFDALASDTPIPAD 403
           G   A TVP+G F   +  G+VV+W+ + A   F+ALA D  IP D
Sbjct: 394 GDTVATTVPVGGFDDVSGSGNVVLWDKNRAGAFFEALADDRQIPDD 439


>tr|C4LLQ8|C4LLQ8_CORK4 Tax_Id=645127 (lytR1)SubName: Full=Putative
           transcriptional regulator, LytR family;[Corynebacterium
           kroppenstedtii]
          Length = 485

 Score =  290 bits (741), Expect = 3e-76
 Identities = 148/277 (53%), Positives = 195/277 (70%), Gaps = 4/277 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D  LHR   L +Y  RP  G GTNWL+VGSDSR GL+ +QQ EL             I+L
Sbjct: 211 DLRLHRVDALTNYGGRPSGGSGTNWLLVGSDSRDGLSEDQQAELSTGGDTGGGRTDSIIL 270

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+  +G +T   +VSIPRDSYV VPG+G+DK+NA++A+GG  LL QTVEQATGLRIDHY
Sbjct: 271 VHIPFVGKAT---MVSIPRDSYVDVPGHGKDKVNASYALGGPQLLQQTVEQATGLRIDHY 327

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSR-ATPRA 297
           AEIGFGGFA +VDA+GGV++C+ +P+ DPLAGI+L PGCQ+LDG +ALG+VRSR +    
Sbjct: 328 AEIGFGGFAGVVDAVGGVKICVEQPMDDPLAGINLQPGCQKLDGPTALGFVRSRHSMDDG 387

Query: 298 DLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWAL 357
           D+ R  NQR F++AL+++A SP  +LNP+R++        + TVD+  HV++LARLG  L
Sbjct: 388 DIGRARNQRTFLAALVKKALSPTTFLNPFRFFPFVSRMTDSFTVDKHDHVWNLARLGIGL 447

Query: 358 HGHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDAL 394
              P   T+PI  + +TDVG V VW+ D A E+F +L
Sbjct: 448 GMSPRNETIPIASYESTDVGDVDVWDDDGAQELFKSL 484


>tr|C2AIG9|C2AIG9_TSUPA Tax_Id=521096 SubName: Full=Cell
           envelope-related function transcriptional attenuator
           common domain;[Tsukamurella paurometabola DSM 20162]
          Length = 466

 Score =  284 bits (727), Expect = 1e-74
 Identities = 148/290 (51%), Positives = 182/290 (62%), Gaps = 4/290 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D  L R   L  YA R     GTNWL+VGSD+R+GLT EQQ++L             I+L
Sbjct: 177 DGKLTRIDALAAYAGRIADTPGTNWLLVGSDAREGLTPEQQKDLATGGDLGGARTDTIML 236

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+   GS     L+SIPRD YVPVPG G  KINAA+ +GG  LLVQT E    +R+DHY
Sbjct: 237 VHIPKSGSPL---LISIPRDLYVPVPGQGSYKINAAYFLGGPKLLVQTFESKAKVRVDHY 293

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGFGGFA +VDALGG+ MC   PI DP AGI L  GCQ L G  ALGYVR+RATP AD
Sbjct: 294 AEIGFGGFATMVDALGGIEMCPKYPINDPKAGIRLQAGCQNLSGAQALGYVRTRATPNAD 353

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDR+++QR+FM+AL  +A SP   LNP+  +S+  A   ALTVD   H++DL RL WAL 
Sbjct: 354 LDRVVHQREFMTALFTKATSPTTLLNPFEMWSLADATVGALTVDTDTHLWDLGRLAWALS 413

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGP 408
             P   T P G  + TD G+ ++W  +   E F  +A+D P+P     GP
Sbjct: 414 SSPVTTTTPTGGSSDTDEGNALIWGKN-TTEFFSLIAADQPVPDRLLSGP 462


>tr|D1ACP3|D1ACP3_THECU Tax_Id=471852 SubName: Full=Cell
           envelope-related transcriptional
           attenuator;[Thermomonospora curvata DSM 43183]
          Length = 424

 Score =  277 bits (709), Expect = 2e-72
 Identities = 148/293 (50%), Positives = 191/293 (65%), Gaps = 10/293 (3%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D+ L RE VL DY  RP    GTNWL+VGSDSR+GLT EQ++E              +LL
Sbjct: 136 DSKLQREAVLADYPGRPADTPGTNWLVVGSDSREGLTKEQRKEYATGNASGRRTDSMMLL 195

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
            + +G      T L+S+PRDSYV +PG+GR+K+NAAFA GG  LLVQTVE+ATG+RIDHY
Sbjct: 196 HYGSG-----GTTLLSLPRDSYVEIPGHGRNKLNAAFAFGGPKLLVQTVEKATGVRIDHY 250

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGFGGF  +VDA+GGV +C+ +P+ DP AG+DL  GCQ LDG  ALG+VR+R     D
Sbjct: 251 AEIGFGGFVGVVDAVGGVDICVEKPLKDPKAGLDLKAGCQTLDGGQALGFVRTRNFANGD 310

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           L+R+ NQR+F +AL+++A SP V LNP+R   +   +AA  TVD+G H+ DL RL WA+ 
Sbjct: 311 LERVENQRKFFAALMKKATSPGVMLNPFRGVPLALNSAANFTVDEGDHLVDLVRLMWAMR 370

Query: 359 ----GHPTALTVPIGEF-TTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFD 406
               G     TVPI  F +   VGS V W+   +  +F AL  D P+P    D
Sbjct: 371 GVSGGDGVTATVPISGFGSAPGVGSYVRWDTARSEALFAALREDKPVPDSVLD 423


>tr|C2BIZ3|C2BIZ3_9CORY Tax_Id=525264 SubName: Full=Transcriptional
           regulator;[Corynebacterium pseudogenitalium ATCC 33035]
          Length = 412

 Score =  275 bits (704), Expect = 6e-72
 Identities = 143/255 (56%), Positives = 178/255 (69%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSRQGL+ EQQ EL             I+L+H+   G +    LVSIPRDS
Sbjct: 160 GTNWLLVGSDSRQGLSEEQQAELGTGGDVGEGRTDTIMLLHIPRTGKAK---LVSIPRDS 216

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV VPG+G DKINAAF  GG  LL QTVE  TGL IDHYAEIG GG A +VD++GGV +C
Sbjct: 217 YVEVPGFGMDKINAAFTYGGPQLLAQTVEGTTGLHIDHYAEIGMGGLANVVDSVGGVDVC 276

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
           + EPI DPLAGIDL  GCQ+L GR ALGYVR+RAT   DLDR+  QR+F SALL +  SP
Sbjct: 277 VKEPINDPLAGIDLQDGCQKLKGRDALGYVRTRATAMGDLDRVQRQREFFSALLDKVASP 336

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
           A  +NP+R +S+    A++  VD+G HV+ LAR+  A+       TVPIG F  T+VG+V
Sbjct: 337 ATLINPFRAFSLVNHTASSFIVDEGDHVWHLARVALAMGSGVDTETVPIGGFQDTEVGNV 396

Query: 380 VVWNHDAAAEMFDAL 394
           V+W+ +AAA ++D+L
Sbjct: 397 VLWDDEAAAGLWDSL 411


>tr|C6R7F2|C6R7F2_9CORY Tax_Id=553206 SubName: Full=Transcriptional
           regulator;[Corynebacterium tuberculostearicum SK141]
          Length = 414

 Score =  273 bits (697), Expect = 4e-71
 Identities = 142/255 (55%), Positives = 177/255 (69%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSRQGL+ EQQ EL             I+L+H+   G +    LVSIPRDS
Sbjct: 162 GTNWLLVGSDSRQGLSEEQQAELGTGGDVGEGRTDTIMLLHIPRTGKAK---LVSIPRDS 218

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV VPG+G DKINAAF  GG  LL QTVE  TGL IDHYAEIG GG A +VD++GGV +C
Sbjct: 219 YVEVPGFGMDKINAAFTYGGPQLLAQTVEGTTGLHIDHYAEIGMGGLANVVDSVGGVDVC 278

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
           + EPI DPLAGIDL  GCQ+L GR ALGYVR+RAT   DLDR+  QR+F SALL +  SP
Sbjct: 279 VKEPINDPLAGIDLQDGCQKLKGRDALGYVRTRATAMGDLDRVQRQREFFSALLDKVASP 338

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
           A  +NP+R +S+    A++  V +G HV+ LAR+  A+       TVPIG F  T+VG+V
Sbjct: 339 ATLINPFRAFSLVNHTASSFIVGEGDHVWHLARVALAMGSGVDTETVPIGGFQDTEVGNV 398

Query: 380 VVWNHDAAAEMFDAL 394
           V+W+ +AAA ++D+L
Sbjct: 399 VLWDDEAAAGLWDSL 413


>tr|C6WBH2|C6WBH2_ACTMD Tax_Id=446462 SubName: Full=Cell
           envelope-related transcriptional
           attenuator;[Actinosynnema mirum]
          Length = 336

 Score =  270 bits (689), Expect = 3e-70
 Identities = 146/291 (50%), Positives = 184/291 (63%), Gaps = 4/291 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           DT+L R   L DY  RP    GTNWL+VGSD+R  LT EQ+ +L             +LL
Sbjct: 48  DTSLSRSDALPDYEGRPADTPGTNWLLVGSDARDDLTDEQKDDLATGDAAGRRTDTIMLL 107

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
               G G ST   LVSIPRDSYV +P  G++K+NAAFA GG PLL +TVE ATG+RIDHY
Sbjct: 108 HIPEGSGKST---LVSIPRDSYVDIPDNGKNKVNAAFAFGGGPLLARTVEGATGIRIDHY 164

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
            E+GFGGFA +VDA+GGV MCL EP+ DPLAG+DL  GCQ+L+G  ALG+VR+RA   AD
Sbjct: 165 MEVGFGGFANVVDAVGGVEMCLDEPLKDPLAGLDLPAGCQELEGSQALGFVRTRAFATAD 224

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           L R+ NQR F+SAL  +A S    LNP+R   +  AA  +++V  G H+  LA +   + 
Sbjct: 225 LQRVQNQRAFLSALADKATSAGTLLNPFRSIPLVFAATDSVSVGDGDHLHHLAAMALGMS 284

Query: 359 GHPTALTVPIGEF-TTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFDGP 408
           G    +TVP+G   T   VGSVV W+ + A  +F AL  D  +PAD    P
Sbjct: 285 GGVDNVTVPVGSTPTMPGVGSVVQWDRENALRLFGALEKDEAVPADLLQQP 335


>tr|Q8FLW3|Q8FLW3_COREF Tax_Id=152794 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium efficiens]
          Length = 417

 Score =  267 bits (683), Expect = 2e-69
 Identities = 136/255 (53%), Positives = 171/255 (67%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSRQGL+ E    L             I+++H+   G  T   L+SIPRDS
Sbjct: 165 GTNWLLVGSDSRQGLSEEDIARLGTGGDIGVGRTDTIMVLHIPRSGEPT---LLSIPRDS 221

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV +PG+G DKINAAF +GG  LL QTVE++TGLR+DHYAEIG GG A +VDA+GGV MC
Sbjct: 222 YVNIPGWGMDKINAAFTVGGPELLAQTVEESTGLRVDHYAEIGMGGLASMVDAVGGVEMC 281

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
             EPI DPLA +D+  GCQ+ DG +ALGYVR+RAT   DLDR++ QR+F S+LL  A SP
Sbjct: 282 PAEPIQDPLANLDIQAGCQEFDGATALGYVRTRATAMGDLDRVVRQREFFSSLLNTATSP 341

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
              LNP+R + +   A    TV +G HV+ LARL  A+ G     TVPI  F   DVG+V
Sbjct: 342 GTLLNPFRVFPMIGDAVGTFTVGEGDHVWHLARLALAMRGGTQTETVPIATFADYDVGNV 401

Query: 380 VVWNHDAAAEMFDAL 394
           V+W+  AA E+F +L
Sbjct: 402 VIWDDYAAEELFSSL 416


>tr|C8NJE3|C8NJE3_COREF Tax_Id=196164 SubName: Full=Transcriptional
           regulator; Flags: Fragment;[Corynebacterium efficiens
           YS-314]
          Length = 361

 Score =  267 bits (683), Expect = 2e-69
 Identities = 136/255 (53%), Positives = 171/255 (67%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSRQGL+ E    L             I+++H+   G  T   L+SIPRDS
Sbjct: 109 GTNWLLVGSDSRQGLSEEDIARLGTGGDIGVGRTDTIMVLHIPRSGEPT---LLSIPRDS 165

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV +PG+G DKINAAF +GG  LL QTVE++TGLR+DHYAEIG GG A +VDA+GGV MC
Sbjct: 166 YVNIPGWGMDKINAAFTVGGPELLAQTVEESTGLRVDHYAEIGMGGLASMVDAVGGVEMC 225

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
             EPI DPLA +D+  GCQ+ DG +ALGYVR+RAT   DLDR++ QR+F S+LL  A SP
Sbjct: 226 PAEPIQDPLANLDIQAGCQEFDGATALGYVRTRATAMGDLDRVVRQREFFSSLLNTATSP 285

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
              LNP+R + +   A    TV +G HV+ LARL  A+ G     TVPI  F   DVG+V
Sbjct: 286 GTLLNPFRVFPMIGDAVGTFTVGEGDHVWHLARLALAMRGGTQTETVPIATFADYDVGNV 345

Query: 380 VVWNHDAAAEMFDAL 394
           V+W+  AA E+F +L
Sbjct: 346 VIWDDYAAEELFSSL 360


>tr|C8NY97|C8NY97_9CORY Tax_Id=585529 SubName: Full=Transcriptional
           regulator;[Corynebacterium genitalium ATCC 33030]
          Length = 298

 Score =  266 bits (680), Expect = 4e-69
 Identities = 138/255 (54%), Positives = 171/255 (67%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWLIVGSDSRQGL+ E    L             I+L+HL   G  T   LVS+PRDS
Sbjct: 46  GTNWLIVGSDSRQGLSDEDIERLGTGGDIGQGRTDTIMLMHLPATGKPT---LVSLPRDS 102

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV +PGYG DKIN+AFA GG  LL +TVEQATGLRIDHYAEIG GG A L DA+GGV +C
Sbjct: 103 YVNIPGYGMDKINSAFAFGGPKLLTETVEQATGLRIDHYAEIGMGGLAGLTDAVGGVELC 162

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
            +EPI DPLA +D+  GCQ++DG ++LGYVR+RAT   DLDR+  QR+FMSAL++R  SP
Sbjct: 163 PSEPIQDPLANLDVQAGCQKMDGPTSLGYVRTRATAMGDLDRVQRQREFMSALMKRVVSP 222

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
            V LNP+R   +       L V +G HV+ LAR+   L       TVPIG+F  ++VGSV
Sbjct: 223 GVLLNPFRLVPMALRGTDLLIVGEGDHVWHLARMALGLRSGVETETVPIGQFADSEVGSV 282

Query: 380 VVWNHDAAAEMFDAL 394
           ++W+   A E+F  L
Sbjct: 283 LIWDEVGAQELFAKL 297


>tr|A4FN51|A4FN51_SACEN Tax_Id=405948 SubName: Full=Probable
           transcriptional regulator, LytR
           family;[Saccharopolyspora erythraea]
          Length = 343

 Score =  263 bits (673), Expect = 2e-68
 Identities = 142/290 (48%), Positives = 187/290 (64%), Gaps = 8/290 (2%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D +L RE  L    +RP  G GTNWL+VGSDSR+ L  E++ EL             ++L
Sbjct: 47  DYSLKREQALPVDGERPQDGPGTNWLLVGSDSREDLDQERKDELGTGDTAGRRTDT-VML 105

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+   G  TPT +VS+PRDS V +PG G+DK+NAAFA GG+ LL +TVE  TG+RIDHY
Sbjct: 106 VHIPESGG-TPT-MVSLPRDSLVKIPGQGKDKLNAAFAYGGSQLLARTVENNTGVRIDHY 163

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AE+G GGFA++ DA+GGV +C+ EP+ DP A +DL PGCQ L G  ALGYVR+RAT R D
Sbjct: 164 AEVGLGGFADITDAIGGVDLCVKEPMQDPKANLDLRPGCQTLQGPQALGYVRTRATARGD 223

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDR+  QR+F++AL  +   P V  NP+R + +    + +  VD G HV+ L  LG A+ 
Sbjct: 224 LDRVQRQREFLAALTEKVSGPEVLANPFRLFPLILDTSQSFLVDSGDHVWHLGSLGLAMQ 283

Query: 359 ----GHPTALTVPIGEFTTTDVG-SVVVWNHDAAAEMFDALASDTPIPAD 403
               G     TVP G F  TD G SVV W+ + A ++F ALA+DTP+P +
Sbjct: 284 GIASGQGVTTTVPFGGFGETDGGASVVEWDDEGAEKLFGALATDTPVPQE 333


>tr|A4FD71|A4FD71_SACEN Tax_Id=405948 SubName: Full=Probable
           transcriptional regulator, LytR
           family;[Saccharopolyspora erythraea]
          Length = 343

 Score =  263 bits (673), Expect = 2e-68
 Identities = 142/290 (48%), Positives = 187/290 (64%), Gaps = 8/290 (2%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D +L RE  L    +RP  G GTNWL+VGSDSR+ L  E++ EL             ++L
Sbjct: 47  DYSLKREQALPVDGERPQDGPGTNWLLVGSDSREDLDQERKDELGTGDTAGRRTDT-VML 105

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH+   G  TPT +VS+PRDS V +PG G+DK+NAAFA GG+ LL +TVE  TG+RIDHY
Sbjct: 106 VHIPESGG-TPT-MVSLPRDSLVKIPGQGKDKLNAAFAYGGSQLLARTVENNTGVRIDHY 163

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AE+G GGFA++ DA+GGV +C+ EP+ DP A +DL PGCQ L G  ALGYVR+RAT R D
Sbjct: 164 AEVGLGGFADITDAIGGVDLCVKEPMQDPKANLDLQPGCQTLQGPQALGYVRTRATARGD 223

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDR+  QR+F++AL  +   P V  NP+R + +    + +  VD G HV+ L  LG A+ 
Sbjct: 224 LDRVQRQREFLAALTEKVSGPEVLANPFRLFPLILDTSQSFLVDSGDHVWHLGSLGLAMQ 283

Query: 359 ----GHPTALTVPIGEFTTTDVG-SVVVWNHDAAAEMFDALASDTPIPAD 403
               G     TVP G F  TD G SVV W+ + A ++F ALA+DTP+P +
Sbjct: 284 GIASGQGVTTTVPFGGFGETDGGASVVEWDDEGAEKLFGALATDTPVPQE 333


>tr|Q8NLN8|Q8NLN8_CORGL Tax_Id=1718 SubName: Full=Transcriptional
           regulator;[Corynebacterium glutamicum]
          Length = 345

 Score =  262 bits (670), Expect = 5e-68
 Identities = 134/255 (52%), Positives = 167/255 (65%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSRQGL+ E    L             I+++H+   G  T   L+SIPRDS
Sbjct: 93  GTNWLLVGSDSRQGLSDEDIERLGTGGDIGVGRTDTIMVLHMPRTGEPT---LLSIPRDS 149

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV VPG+G DK NAAF +GG  LL QTVE+ATGLRIDHYAEIG GG A +VDA+GGV MC
Sbjct: 150 YVNVPGWGMDKANAAFTVGGPELLTQTVEEATGLRIDHYAEIGMGGLANMVDAVGGVEMC 209

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
             EP+ DPLA +D+  GCQ+ DG +ALGYVR+RAT   DLDR++ QR+F SALL  A SP
Sbjct: 210 PAEPMYDPLANLDIQAGCQEFDGAAALGYVRTRATALGDLDRVVRQREFFSALLSTATSP 269

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
              LNP+R + +   A    TV +G HV+ LARL  A+ G     TVPI  F   DVG+V
Sbjct: 270 GTLLNPFRTFPMISNAVGTFTVGEGDHVWHLARLALAMRGGIVTETVPIASFADYDVGNV 329

Query: 380 VVWNHDAAAEMFDAL 394
            +W+   A  +F ++
Sbjct: 330 AIWDEAGAEALFSSM 344


>tr|Q6M1W2|Q6M1W2_CORGL Tax_Id=1718 SubName: Full=Cell
           envelope-related transcriptional
           regulator;[Corynebacterium glutamicum]
          Length = 414

 Score =  262 bits (670), Expect = 5e-68
 Identities = 134/255 (52%), Positives = 167/255 (65%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSRQGL+ E    L             I+++H+   G  T   L+SIPRDS
Sbjct: 162 GTNWLLVGSDSRQGLSDEDIERLGTGGDIGVGRTDTIMVLHMPRTGEPT---LLSIPRDS 218

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV VPG+G DK NAAF +GG  LL QTVE+ATGLRIDHYAEIG GG A +VDA+GGV MC
Sbjct: 219 YVNVPGWGMDKANAAFTVGGPELLTQTVEEATGLRIDHYAEIGMGGLANMVDAVGGVEMC 278

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
             EP+ DPLA +D+  GCQ+ DG +ALGYVR+RAT   DLDR++ QR+F SALL  A SP
Sbjct: 279 PAEPMYDPLANLDIQAGCQEFDGAAALGYVRTRATALGDLDRVVRQREFFSALLSTATSP 338

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
              LNP+R + +   A    TV +G HV+ LARL  A+ G     TVPI  F   DVG+V
Sbjct: 339 GTLLNPFRTFPMISNAVGTFTVGEGDHVWHLARLALAMRGGIVTETVPIASFADYDVGNV 398

Query: 380 VVWNHDAAAEMFDAL 394
            +W+   A  +F ++
Sbjct: 399 AIWDEAGAEALFSSM 413


>tr|C2CRD8|C2CRD8_CORST Tax_Id=525268 SubName: Full=Transcriptional
           regulator;[Corynebacterium striatum ATCC 6940]
          Length = 454

 Score =  262 bits (669), Expect = 7e-68
 Identities = 135/263 (51%), Positives = 177/263 (67%), Gaps = 3/263 (1%)

Query: 132 ADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTA 191
           A++     GTNWL+VGSDSRQGLT E+Q EL             I+L+H+   G +    
Sbjct: 194 AEQVAKTAGTNWLLVGSDSRQGLTEEEQAELGTGGDVGVGRTDTIMLLHIPSSGKAK--- 250

Query: 192 LVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVD 251
           L+SIPRDSYV VPG+G DKINAAF  GG  LL +TVEQ+TGLRI+HYAEIG GG A +VD
Sbjct: 251 LISIPRDSYVEVPGFGMDKINAAFTYGGPQLLTETVEQSTGLRINHYAEIGMGGLANVVD 310

Query: 252 ALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSA 311
           ++GGV +C+ EPI DPLAGI+L  GCQ+L GR ALGYVR+RAT   DLDR+  QR+F +A
Sbjct: 311 SVGGVDICVKEPIDDPLAGINLQAGCQELRGRDALGYVRTRATAMGDLDRVQRQREFFAA 370

Query: 312 LLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEF 371
           LL +  SP   +NP+R  S+    A +  V +  HV+ LAR+  A+       TVPIG F
Sbjct: 371 LLDKITSPGTLINPFRTISLVNHTATSFVVGEKDHVWHLARVALAMASGVETETVPIGGF 430

Query: 372 TTTDVGSVVVWNHDAAAEMFDAL 394
             T VG+VV+W+ +A  +++D++
Sbjct: 431 QDTTVGNVVLWDDEATQQLWDSM 453


>tr|C0WG87|C0WG87_9CORY Tax_Id=525260 SubName: Full=Transcriptional
           regulator;[Corynebacterium accolens ATCC 49725]
          Length = 424

 Score =  262 bits (669), Expect = 7e-68
 Identities = 142/276 (51%), Positives = 181/276 (65%), Gaps = 5/276 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           DT L R   L D  ++     GTNWL+VGSDSRQGL+ E Q+ L             I+L
Sbjct: 153 DTRLTRVDALPD--EQVANTSGTNWLLVGSDSRQGLSEEDQQALGTGGDVGEGRTDTIML 210

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           +H+   G +    LVSIPRDSYV VPG+G DKINAAFA GG  LL QTVE  TGL IDHY
Sbjct: 211 LHIPRSGQAQ---LVSIPRDSYVEVPGFGMDKINAAFAYGGPKLLTQTVEGNTGLHIDHY 267

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIG GG A +VD++GGV +C+ EPI DPLAGIDL  GCQ+L+G  ALGYVR+RAT   D
Sbjct: 268 AEIGMGGLANVVDSVGGVDICVAEPINDPLAGIDLQEGCQKLEGSDALGYVRTRATAMGD 327

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDR+  QR+F +ALL +  SPA  +NP+R  S+    A++  V  G HV+ LAR+  A+ 
Sbjct: 328 LDRVQRQREFFAALLDKITSPATLINPFRSISLINHTASSFIVGDGDHVWHLARVALAMG 387

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDAL 394
                 TVPIG F  T VG+VV+W+ + A +++D++
Sbjct: 388 SGVDTETVPIGGFQDTVVGNVVLWDDEGAQQLWDSM 423


>tr|C0XNM6|C0XNM6_9CORY Tax_Id=525263 SubName: Full=Transcriptional
           regulator;[Corynebacterium lipophiloflavum DSM 44291]
          Length = 283

 Score =  259 bits (662), Expect = 4e-67
 Identities = 138/276 (50%), Positives = 178/276 (64%), Gaps = 5/276 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D  L+R   L D  +R     GTNWL+VGSDSRQGL+ +                  ++L
Sbjct: 12  DARLNRVDALPD--ERIANTAGTNWLLVGSDSRQGLSEDDIARYGTGGDLGVGRTDTVML 69

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           +HL   G   P  LVSIPRDSYV +PGYG DKINAAFA GG  LL  TVEQ TGLR+D Y
Sbjct: 70  LHLPRTG---PATLVSIPRDSYVSIPGYGMDKINAAFAYGGPKLLATTVEQNTGLRVDRY 126

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIG GG A +VDA+GGV +C+TEPI DPLA + + PGCQ++DG + LGYVR+RAT   D
Sbjct: 127 AEIGMGGLAGVVDAIGGVEICVTEPIQDPLANLYVEPGCQKMDGPTGLGYVRTRATALGD 186

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDR+  QR+F+SA++    SPAV LNP+R   +  A     TV+ G HV++LAR+  A+ 
Sbjct: 187 LDRVNRQREFLSAIVNEVTSPAVLLNPFRLIPLMWAVPGMFTVNTGDHVWNLARIPLAMR 246

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDAL 394
           G     TVP+G F  T+VG+V++W+   A  +F +L
Sbjct: 247 GGLHTETVPLGGFMDTEVGNVMLWDEAGAEALFSSL 282


>tr|Q4JY39|Q4JY39_CORJK Tax_Id=306537 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium jeikeium]
          Length = 447

 Score =  258 bits (659), Expect = 1e-66
 Identities = 138/278 (49%), Positives = 184/278 (66%), Gaps = 4/278 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQ-QRELXXXXXXXXXXXXXIL 177
           DT L R   L+DY  R G   GTNWL+VGSDSR GL+ E   R +             I+
Sbjct: 171 DTKLQRTDALQDYDGRLGGTSGTNWLLVGSDSRAGLSKEDADRLMAGELNDSVGRTDTIM 230

Query: 178 LVHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDH 237
           +VH+   G      ++S+PRDS+V +PG G++K+N AF+IGG  LL QTVEQATG+ +DH
Sbjct: 231 VVHIPRFGGEA--TMLSLPRDSWVDIPGNGKNKLNQAFSIGGPALLQQTVEQATGIHLDH 288

Query: 238 YAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRAT-PR 296
           YAEIGFGGFA +VDA+GGV MCL EP+ DP+AGI+L  GCQ+LDG +ALGYVRSR T  +
Sbjct: 289 YAEIGFGGFANVVDAVGGVEMCLDEPLEDPMAGINLQAGCQELDGPTALGYVRSRYTSAQ 348

Query: 297 ADLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWA 356
            DLDR+  QR+F++AL ++ +SP   LNP++   V  A +A +TV++  HV++LA LG A
Sbjct: 349 GDLDRVERQRKFLAALSKKIKSPGTLLNPFKNLKVADALSANMTVNEDDHVWNLASLGLA 408

Query: 357 LHGHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDAL 394
           + G     TVPI  +  T  G+V +W+   A EMF  L
Sbjct: 409 MAGGAKQETVPIAGYEDTYAGNVALWDDAGAEEMFAKL 446


>tr|C8RSW0|C8RSW0_CORJE Tax_Id=525262 SubName: Full=Transcriptional
           regulator;[Corynebacterium jeikeium ATCC 43734]
          Length = 292

 Score =  258 bits (659), Expect = 1e-66
 Identities = 138/278 (49%), Positives = 184/278 (66%), Gaps = 4/278 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQ-QRELXXXXXXXXXXXXXIL 177
           DT L R   L+DY  R G   GTNWL+VGSDSR GL+ E   R +             I+
Sbjct: 16  DTKLQRTDALQDYDGRLGGTSGTNWLLVGSDSRAGLSKEDADRLMAGELNDSVGRTDTIM 75

Query: 178 LVHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDH 237
           +VH+   G      ++S+PRDS+V +PG G++K+N AF+IGG  LL QTVEQATG+ +DH
Sbjct: 76  VVHIPRFGGEA--TMLSLPRDSWVDIPGNGKNKLNQAFSIGGPALLQQTVEQATGIHLDH 133

Query: 238 YAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRAT-PR 296
           YAEIGFGGFA +VDA+GGV MCL EP+ DP+AGI+L  GCQ+LDG +ALGYVRSR T  +
Sbjct: 134 YAEIGFGGFANVVDAVGGVEMCLDEPLEDPMAGINLQAGCQELDGPTALGYVRSRYTSAQ 193

Query: 297 ADLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWA 356
            DLDR+  QR+F++AL ++ +SP   LNP++   V  A +A +TV++  HV++LA LG A
Sbjct: 194 GDLDRVERQRKFLAALSKKIKSPGTLLNPFKNLKVADALSANMTVNEDDHVWNLASLGLA 253

Query: 357 LHGHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDAL 394
           + G     TVPI  +  T  G+V +W+   A EMF  L
Sbjct: 254 MAGGAKQETVPIAGYEDTYAGNVALWDDAGAEEMFAKL 291


>tr|A4QHU8|A4QHU8_CORGB Tax_Id=340322 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium glutamicum]
          Length = 348

 Score =  255 bits (651), Expect = 8e-66
 Identities = 131/255 (51%), Positives = 164/255 (64%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSRQGL+ E    L             I+++H+   G  T   L+SIPRDS
Sbjct: 96  GTNWLLVGSDSRQGLSDEDIERLGTGGDIGVGRTDTIMVLHMPRTGEPT---LLSIPRDS 152

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV VPG+G DK NAAF +GG  LL QTVE+ATGLRIDHYAEIG GG A +VDA+GGV MC
Sbjct: 153 YVNVPGWGMDKANAAFTVGGPELLTQTVEEATGLRIDHYAEIGMGGLANMVDAVGGVEMC 212

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
             E + DPLA +D+  GCQ+ DG +ALGYVR+RAT   DLDR++ QR+F SALL  A SP
Sbjct: 213 PAEAMYDPLANLDIQAGCQEFDGAAALGYVRTRATALGDLDRVVRQREFFSALLSTATSP 272

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
              LNP+R + +   A    TV +G HV+ L RL  A+       TVPI  F   DVG+V
Sbjct: 273 GTLLNPFRTFPMISNAVGTFTVGEGDHVWHLVRLALAMRSGIQTETVPIASFADYDVGNV 332

Query: 380 VVWNHDAAAEMFDAL 394
            +W+   A  +F ++
Sbjct: 333 AIWDEAGAEALFSSM 347


>tr|C3PK90|C3PK90_CORA7 Tax_Id=548476 (lytR1)SubName:
           Full=Transcriptional regulator, LytR
           family;[Corynebacterium aurimucosum]
          Length = 479

 Score =  253 bits (646), Expect = 3e-65
 Identities = 135/255 (52%), Positives = 171/255 (67%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSRQGLT EQQ EL             I+L+H+   G +    LVSIPRDS
Sbjct: 227 GTNWLLVGSDSRQGLTEEQQAELGTGGDVGVGRTDTIMLLHIPSSGKAQ---LVSIPRDS 283

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV VPG+G DK+NAAF  GG  LL QTVEQATGL IDHYAEIG GG A +VD++GGV +C
Sbjct: 284 YVDVPGFGIDKVNAAFTYGGPQLLTQTVEQATGLHIDHYAEIGMGGLANVVDSVGGVEIC 343

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
           + EPI DPLAGIDL  GCQ+L G  ALGYVR+RAT   DLDR+  QR+F +ALL +A S 
Sbjct: 344 VKEPINDPLAGIDLQAGCQKLRGPDALGYVRTRATAMGDLDRVERQREFFAALLDKATSF 403

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
           +   NP++  S+    A +  V++  HV+ LAR+  ++       TVPIG F  T VG+V
Sbjct: 404 STIGNPFKAVSLVNHTADSFIVNEKDHVWHLARVALSMASGVETKTVPIGGFQDTVVGNV 463

Query: 380 VVWNHDAAAEMFDAL 394
           V+W+   A  ++D++
Sbjct: 464 VLWDDAEAQALWDSM 478


>tr|C2GL73|C2GL73_9CORY Tax_Id=548478 SubName: Full=Transcriptional
           regulator;[Corynebacterium glucuronolyticum ATCC 51866]
          Length = 391

 Score =  253 bits (646), Expect = 3e-65
 Identities = 127/255 (49%), Positives = 168/255 (65%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSR+GLT +Q+ EL             I+++HL   G  T   L+SIPRDS
Sbjct: 139 GTNWLLVGSDSREGLTQKQKDELMTGDDEGGSRTDTIMVLHLPMSGKPT---LLSIPRDS 195

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YVP+PGYG +KINAAFAIGG+ LL +TVEQ TGL+IDHYAE+GFGG A +VDA+GGV +C
Sbjct: 196 YVPIPGYGNNKINAAFAIGGSQLLTETVEQNTGLKIDHYAEVGFGGLANIVDAVGGVELC 255

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
             +PI D +    L PGC + DG +AL + RSRAT   D+DR+  QRQF+  LL    SP
Sbjct: 256 TEDPIYDDVIAFYLEPGCHKFDGPNALKFTRSRATALGDIDRVARQRQFLGVLLDTMTSP 315

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
               NP +   +    A + TVD G H++ LAR+  A+       T+P+  F  T+VGSV
Sbjct: 316 KTLANPLKIVPLVTHVAGSFTVDNGDHIWHLARVALAMRSGINEQTIPVASFADTEVGSV 375

Query: 380 VVWNHDAAAEMFDAL 394
           V+W+ DAA ++F++L
Sbjct: 376 VLWDQDAATKLFNSL 390


>tr|C0VWM9|C0VWM9_9CORY Tax_Id=548477 SubName: Full=Transcriptional
           regulator;[Corynebacterium glucuronolyticum ATCC 51867]
          Length = 391

 Score =  253 bits (646), Expect = 3e-65
 Identities = 127/255 (49%), Positives = 168/255 (65%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSR+GLT +Q+ EL             I+++HL   G  T   L+SIPRDS
Sbjct: 139 GTNWLLVGSDSREGLTQKQKDELMTGDDEGGSRTDTIMVLHLPMSGKPT---LLSIPRDS 195

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YVP+PGYG +KINAAFAIGG+ LL +TVEQ TGL+IDHYAE+GFGG A +VDA+GGV +C
Sbjct: 196 YVPIPGYGNNKINAAFAIGGSQLLTETVEQNTGLKIDHYAEVGFGGLANIVDAVGGVELC 255

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
             +PI D +    L PGC + DG +AL + RSRAT   D+DR+  QRQF+  LL    SP
Sbjct: 256 TEDPIYDDVIAFYLEPGCHKFDGPNALKFTRSRATALGDIDRVARQRQFLGVLLDTMTSP 315

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
               NP +   +    A + TVD G H++ LAR+  A+       T+P+  F  T+VGSV
Sbjct: 316 KTLANPLKIVPLVTHVAGSFTVDNGDHIWHLARVALAMRSGINEQTIPVASFADTEVGSV 375

Query: 380 VVWNHDAAAEMFDAL 394
           V+W+ DAA ++F++L
Sbjct: 376 VLWDQDAATKLFNSL 390


>tr|A4FG61|A4FG61_SACEN Tax_Id=405948 SubName: Full=Probable
           transcriptional regulator, LytR
           family;[Saccharopolyspora erythraea]
          Length = 384

 Score =  252 bits (644), Expect = 5e-65
 Identities = 139/294 (47%), Positives = 186/294 (63%), Gaps = 10/294 (3%)

Query: 119 DTALHREPVLRDYADRPGPGR-GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXIL 177
           D+ L R   L DY  R      GTNWL+VGSDSR+GL   Q+ EL             ++
Sbjct: 94  DSMLQRTDAL-DYPGRESKDTPGTNWLLVGSDSREGLDDSQREELSAGNAPGRRTDS-MM 151

Query: 178 LVHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDH 237
           L+H+   G     A++S+PRDS VP+PG+GRDK+N+AF+ GG  LL QT+E  TG+ IDH
Sbjct: 152 LIHIPESGGQP--AMISLPRDSSVPIPGHGRDKLNSAFSYGGPQLLAQTLEGVTGVHIDH 209

Query: 238 YAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSR-ATPR 296
           YAEIGFGGFA+LVDA+GGV +CL +PI D +A IDL  GCQ+LDG +ALG+VR+R A   
Sbjct: 210 YAEIGFGGFADLVDAVGGVDVCLDQPIKDDMAHIDLPAGCQELDGPNALGFVRARYALAD 269

Query: 297 ADLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWA 356
            D+ R  NQR+ + AL+ +A SPA   NP+R   +  +A+   TV+ G HV+ LA LG A
Sbjct: 270 GDIGRAANQRKLLGALVDKASSPATLFNPFRLVPLASSASKTFTVNNGDHVWHLASLGLA 329

Query: 357 L----HGHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADAFD 406
           +     G     +VP G F   +  SV++W+ + AA MFDA+A D PIP +  D
Sbjct: 330 MGDLSGGQGVTTSVPFGGFGKVNGQSVILWDKERAAAMFDAIAKDQPIPPEVLD 383


>tr|B1VE97|B1VE97_CORU7 Tax_Id=504474 (lytR1)SubName: Full=Putative
           transcriptional regulator (LytR family);[Corynebacterium
           urealyticum]
          Length = 508

 Score =  251 bits (642), Expect = 9e-65
 Identities = 138/278 (49%), Positives = 179/278 (64%), Gaps = 6/278 (2%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXX-IL 177
           D+ L R   L++Y  R G   GTNWL+VGSDSR GL  E    L              I+
Sbjct: 234 DSQLQRTEALQNYEGRVGGTAGTNWLLVGSDSRAGLDQETADRLSAGMLDESEGRTDSII 293

Query: 178 LVHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDH 237
           LVHL  +G +T   ++S+PRDS+V +PGYG +KINAAFA+GG  LL +TVE+ATGLRIDH
Sbjct: 294 LVHLPLVGKAT---MISLPRDSFVNIPGYGENKINAAFALGGPALLQRTVEEATGLRIDH 350

Query: 238 YAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPR- 296
           YAE+GFGGFA  VD +GGV MCL EP+ DP+AGI+L  GCQ+LDG +ALGYVRSR T   
Sbjct: 351 YAEVGFGGFANAVDGVGGVEMCLEEPLEDPMAGINLPAGCQKLDGPNALGYVRSRYTSAG 410

Query: 297 ADLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWA 356
            DLDR   QRQ ++AL ++  SP    NP+R +      A +LTVD+G H++ LARLG  
Sbjct: 411 GDLDRAGRQRQLLAALSKKMLSPGTLFNPFRLFPTVGGVAKSLTVDKGDHMWHLARLGVK 470

Query: 357 LHGHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDAL 394
           + G    + VP         GSV++W+  AA ++F +L
Sbjct: 471 MRGAKQEV-VPTSGSADNYAGSVLLWDQAAAEQLFSSL 507


>tr|Q47LS2|Q47LS2_THEFY Tax_Id=269800 SubName: Full=Cell
           envelope-related transcriptional
           attenuator;[Thermobifida fusca]
          Length = 404

 Score =  249 bits (635), Expect = 6e-64
 Identities = 133/289 (46%), Positives = 182/289 (62%), Gaps = 7/289 (2%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           ++ L+R   L  Y  RP    GT +LIVGSDSR+GL+ E    L             ++L
Sbjct: 117 NSRLNRVAALVPYEGRPDDQPGTTYLIVGSDSREGLSDEDMEALRTGKAEGKRTDTIMVL 176

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFA--IGGAPL-LVQTVEQATGLRI 235
                + +    A++S+PRDSYV +PG G +KINAA+A  +GG P  LV+T EQA+G+RI
Sbjct: 177 Y----VPTEGRPAIISVPRDSYVEIPGIGANKINAAYAEALGGGPATLVRTFEQASGVRI 232

Query: 236 DHYAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATP 295
           DHY EIGF GF ++VDA+GGV +C  E + DP AG+D+  GCQ +DG +ALGYVR+RATP
Sbjct: 233 DHYVEIGFAGFVDIVDAVGGVELCPEEAMEDPKAGLDIEAGCQVMDGPTALGYVRTRATP 292

Query: 296 RADLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGW 355
           RADLDR+  QR+F SAL+++A +P+   NP+R   +  +  +  +VD+G  + DLA L  
Sbjct: 293 RADLDRIQRQREFFSALIQQATAPSTLFNPFRSIPLVLSGTSTFSVDEGDSLMDLAWLAL 352

Query: 356 ALHGHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADA 404
           A+   P    VP+G   T DVGSVV+W+   A EMF A+    PIP  A
Sbjct: 353 AMRDSPATTAVPVGSTPTLDVGSVVLWDEARAEEMFAAMREGRPIPESA 401


>tr|Q6NEM2|Q6NEM2_CORDI Tax_Id=1717 SubName: Full=Putative membrane
           protein;[Corynebacterium diphtheriae]
          Length = 431

 Score =  247 bits (631), Expect = 2e-63
 Identities = 126/255 (49%), Positives = 168/255 (65%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSR GL+ E  + L             I+++H+   G +T   L+SIPRDS
Sbjct: 179 GTNWLLVGSDSRAGLSEEDVQRLGTGGDIGSMRTDTIMVLHIPSSGKAT---LMSIPRDS 235

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV +PGYG DKINA+F  GGAPLL QTVE ATGLRI+HYAEIG GG A +VDA+GG+ +C
Sbjct: 236 YVEIPGYGMDKINASFTYGGAPLLTQTVENATGLRINHYAEIGMGGLANVVDAVGGIEVC 295

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
             EPI DPLAG+++A GCQ++DG +ALGYVR+R T   DLDR+  QR+F +AL+ +  S 
Sbjct: 296 PAEPIDDPLAGLNIAAGCQKVDGPTALGYVRTRHTALGDLDRVQRQREFFAALVNKVTST 355

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
           +   NP+R        A + TV +  H + LAR+  A+      +TVP   F   DVG+V
Sbjct: 356 STLANPFRIMPTINTVAGSFTVGKKDHAWHLARVALAMREGVETVTVPYAGFADYDVGNV 415

Query: 380 VVWNHDAAAEMFDAL 394
           V+W+  A+ E+F +L
Sbjct: 416 VLWDEVASEELFASL 430


>tr|C7MT33|C7MT33_SACVD Tax_Id=471857 SubName: Full=Cell
           envelope-related transcriptional
           attenuator;[Saccharomonospora viridis]
          Length = 307

 Score =  247 bits (631), Expect = 2e-63
 Identities = 140/292 (47%), Positives = 183/292 (62%), Gaps = 16/292 (5%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D++++R   L DY  RP  G GTNWL+VGSDSR+GL  E+  EL             I++
Sbjct: 21  DSSINRIDALPDYEGRPAAGEGTNWLLVGSDSREGLDEERMAELSTGDTGGKRTDT-IMI 79

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
            H+    + TP  L+S+PRDS V +PG+G +KINAAF+ GGAPLLV+TVEQATGLRIDHY
Sbjct: 80  AHIPD--NDTPPTLLSLPRDSRVEIPGHGVNKINAAFSFGGAPLLVRTVEQATGLRIDHY 137

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVR---SRATP 295
           AEIGFGGFAE+VDA+GGV M + E + D   GI +  G Q LDG  ALG+VR   S ATP
Sbjct: 138 AEIGFGGFAEVVDAIGGVEMDIPEEMRDTKTGIVIPAGTQILDGAQALGFVRMRYSEATP 197

Query: 296 RADLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGW 355
           R+DLDR+ NQR+F+ AL     SPA  LNP+  + +  A   ALT+D+  H+  L  L W
Sbjct: 198 RSDLDRVANQRKFIGALASEIASPATLLNPFDVFPLLGAVPDALTLDEDDHLHHLVALAW 257

Query: 356 ALHGHPTALTVPIGEFTTTDV----GSVVVWNHDAAAEMFDALASDTPIPAD 403
           A+ G      +  G   TT V     S   W+   +  +F+AL +D+PIP +
Sbjct: 258 AMRG------IGGGGVVTTTVPVTSASAENWDPAKSEALFEALRTDSPIPEE 303


>tr|C5V8N8|C5V8N8_9CORY Tax_Id=553207 SubName: Full=Transcriptional
           regulator;[Corynebacterium matruchotii ATCC 14266]
          Length = 448

 Score =  247 bits (630), Expect = 2e-63
 Identities = 125/255 (49%), Positives = 167/255 (65%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSR GL+    + L             I+L+H+   G +T   LVS+PRDS
Sbjct: 196 GTNWLLVGSDSRTGLSEADAQRLGTGGDIGSMRTDTIMLLHIPLTGKAT---LVSLPRDS 252

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV +PGYG DKINAAF  GG  LL QTVE+ATGLRI HYAEIG GG A +VDA+ G+ +C
Sbjct: 253 YVNIPGYGMDKINAAFTFGGPQLLTQTVEEATGLRIKHYAEIGMGGLANVVDAVSGIEVC 312

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
             EPI DPLA +D+  GCQ++DG +ALGYVR+RAT   DLDR+  QR+F +AL+++  S 
Sbjct: 313 PKEPIQDPLAHLDIQAGCQKVDGPTALGYVRTRATAMGDLDRVQRQREFFAALVKKVSSA 372

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
               NP+R          + TV +  HV++LAR+  A+    T  TVP+G F   DVGSV
Sbjct: 373 GTLANPFRLLPTITTVTGSFTVGEKDHVWNLARVALAMRSGVTTETVPVGGFGNYDVGSV 432

Query: 380 VVWNHDAAAEMFDAL 394
           V+W+ + + ++F++L
Sbjct: 433 VLWDEEGSQQLFNSL 447


>tr|C0E5U0|C0E5U0_9CORY Tax_Id=566549 SubName: Full=Putative
           uncharacterized protein;[Corynebacterium matruchotii
           ATCC 33806]
          Length = 285

 Score =  247 bits (630), Expect = 2e-63
 Identities = 125/255 (49%), Positives = 167/255 (65%), Gaps = 3/255 (1%)

Query: 140 GTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVHLAGLGSSTPTALVSIPRDS 199
           GTNWL+VGSDSR GL+    + L             I+L+H+   G +T   LVS+PRDS
Sbjct: 33  GTNWLLVGSDSRTGLSEADAQRLGTGGDIGSMRTDTIMLLHIPLTGKAT---LVSLPRDS 89

Query: 200 YVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMC 259
           YV +PGYG DKINAAF  GG  LL QTVE+ATGLRI HYAEIG GG A +VDA+ G+ +C
Sbjct: 90  YVNIPGYGMDKINAAFTFGGPQLLTQTVEEATGLRIKHYAEIGMGGLANVVDAVSGIEVC 149

Query: 260 LTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRADLDRMINQRQFMSALLRRAESP 319
             EPI DPLA +D+  GCQ++DG +ALGYVR+RAT   DLDR+  QR+F +AL+++  S 
Sbjct: 150 PKEPIQDPLAHLDIQAGCQKVDGPTALGYVRTRATAMGDLDRVQRQREFFAALVKKVSSA 209

Query: 320 AVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALHGHPTALTVPIGEFTTTDVGSV 379
               NP+R          + TV +  HV++LAR+  A+    T  TVP+G F   DVGSV
Sbjct: 210 GTLANPFRLLPTITTVTGSFTVGEKDHVWNLARVALAMRSGVTTETVPVGGFGNYDVGSV 269

Query: 380 VVWNHDAAAEMFDAL 394
           V+W+ + + ++F++L
Sbjct: 270 VLWDEEGSQQLFNSL 284


>tr|D0LB89|D0LB89_GORB4 Tax_Id=526226 SubName: Full=Cell
           envelope-related function transcriptional attenuator,
           LytR/CpsA family;[Gordonia bronchialis]
          Length = 307

 Score =  246 bits (628), Expect = 4e-63
 Identities = 138/283 (48%), Positives = 174/283 (61%), Gaps = 5/283 (1%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           D+ LHR   L  YA RPG   GTNWLIVG+DSR  L+ EQQR               I+L
Sbjct: 18  DSKLHRVDALVSYAGRPGDTPGTNWLIVGTDSRADLS-EQQRTDLSTGDAAGARTDTIML 76

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHY 238
           VH    G      +VS+PRD YVP+PG G  KINAAF  GG  LLV+TV+  TG+RIDHY
Sbjct: 77  VHNPPSGRPM---IVSLPRDLYVPIPGIGDSKINAAFNSGGPQLLVRTVQDLTGIRIDHY 133

Query: 239 AEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPRAD 298
           AEIGFGGF  LVDA+GGV +CL + I DP AG  L  GC +L+G+ AL  VRSR  P+AD
Sbjct: 134 AEIGFGGFDTLVDAVGGVDVCLDQSINDPKAGPPLKKGCHRLNGKQALTLVRSRDFPQAD 193

Query: 299 LDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH 358
           LDR++NQR+F++AL+ R  SP++ LNP+R +     A  ALTVDQG H+++LA L +AL 
Sbjct: 194 LDRVVNQRKFLAALISRVTSPSILLNPFRLFGFINGAIDALTVDQGDHIWNLASLAFALR 253

Query: 359 GHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIP 401
             P   T P G+      G   +   D+  E F  L +   +P
Sbjct: 254 DDPITTTAPTGDAEFVG-GESALPVSDSTTEFFGYLKAGKEVP 295


>tr|C4ENX4|C4ENX4_STRRS Tax_Id=479432 SubName: Full=Cell
           envelope-related transcriptional
           attenuator;[Streptosporangium roseum DSM 43021]
          Length = 326

 Score =  244 bits (623), Expect = 1e-62
 Identities = 139/289 (48%), Positives = 181/289 (62%), Gaps = 6/289 (2%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           ++ L R   L DY  RP    GTNWL+VGSDSR GLT  Q+R+L             +LL
Sbjct: 38  NSRLTRIEALTDYDGRPADTPGTNWLLVGSDSRAGLTKAQRRKLATGSSVGRRTDTMMLL 97

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAI--GGAPLLVQTVEQATGLRID 236
            H+   G   PT LVS+PRDSYVP+ G+G  K+NAA+A   GG  LL +TVE+ TGLRID
Sbjct: 98  -HIPDTGDR-PT-LVSLPRDSYVPIDGHGSGKLNAAYAYQDGGPKLLAKTVEKVTGLRID 154

Query: 237 HYAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSRATPR 296
           HY EIGFGGF  +VDA+GGV + + + I DP AGIDL  G Q +DG +ALGYVR+RAT  
Sbjct: 155 HYMEIGFGGFVGIVDAIGGVEINVKQAIKDPKAGIDLKKGLQTMDGGTALGYVRTRATGA 214

Query: 297 -ADLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGW 355
             D DR   QRQF SA++++A SP V +NP+R   +  +A  ++ V + +  F+L  LG 
Sbjct: 215 IPDFDRTQRQRQFFSAVVKKAASPGVLINPFRSIPLALSATDSVAVGEESGAFNLLSLGL 274

Query: 356 ALHGHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIPADA 404
           A+  +P    VP+G   T +  +VV W+   A  MFDALA D P+P DA
Sbjct: 275 AMGDNPVTTVVPVGSLPTINGEAVVKWDTAKALRMFDALAEDRPVPKDA 323


>tr|C1YKP0|C1YKP0_NOCDA Tax_Id=446468 SubName: Full=Cell
           envelope-related function transcriptional attenuator
           common domain;[Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 431

 Score =  236 bits (603), Expect = 3e-60
 Identities = 134/303 (44%), Positives = 181/303 (59%), Gaps = 20/303 (6%)

Query: 119 DTALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILL 178
           ++ L R   L DY  RP    GT ++IVGSDSRQGL+ EQ  E+             I++
Sbjct: 131 NSRLERVEALLDYEGRPDGQPGTTYMIVGSDSRQGLSEEQMDEMATGYAEGRRTDT-IMV 189

Query: 179 VHLAGLGSSTPTALVSIPRDSYVP--VPGYGRDKINAAFA-------------IGGAPLL 223
           +++   G  T   +VS+PRDSYVP  VPGY  +KIN AFA              GG   L
Sbjct: 190 LYIPDEGEPT---IVSVPRDSYVPLAVPGYADNKINTAFADAVCGTNDAGEEVCGGPAPL 246

Query: 224 VQTVEQATGLRIDHYAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGR 283
           V+T E+A+G+ IDHY EIG GGF ++VDA+GGV +C  E + DP AG+D+  GCQ +DG 
Sbjct: 247 VETFERASGVHIDHYVEIGMGGFVDIVDAVGGVELCPEEAMADPKAGLDIEAGCQMMDGG 306

Query: 284 SALGYVRSRATPRADLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQ 343
           +ALGYVR+RATPRADLDR+  QR+F SAL++ A +P+   NP+    +  A      VD+
Sbjct: 307 TALGYVRTRATPRADLDRIARQREFFSALVQTASAPSTLFNPFESIPLVLAGTDTFMVDE 366

Query: 344 GAHVFDLARLGWALHGHPTALTVPIGEFTTTD-VGSVVVWNHDAAAEMFDALASDTPIPA 402
           G  +  LA +  A+ G      +P+G+  T D VGSVVVW+   + EMF A+ +  PIP 
Sbjct: 367 GDDLRHLASMLLAMRGGTQTTAIPVGQTPTLDGVGSVVVWDEVRSEEMFAAMRAGEPIPE 426

Query: 403 DAF 405
            AF
Sbjct: 427 SAF 429


>tr|C7QG42|C7QG42_CATAD Tax_Id=479433 SubName: Full=Cell
           envelope-related transcriptional
           attenuator;[Catenulispora acidiphila]
          Length = 393

 Score =  220 bits (561), Expect = 2e-55
 Identities = 117/301 (38%), Positives = 179/301 (59%), Gaps = 24/301 (7%)

Query: 122 LHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXX---ILL 178
           +  E V+ DY  RP  G+GTNWL+VGSDSR+GLT++Q+  L                +++
Sbjct: 90  IRHENVISDYPGRPAEGKGTNWLLVGSDSREGLTSDQEDALHTGTGAVTGNTSRTDSMMI 149

Query: 179 VHLAGLGSSTPTALVSIPRDSYVPVPGY----------GRDKINAAFAIGGAPLLVQTVE 228
           +H      S  T+L+S+PRDSYV +P +           ++K+NAA+A G APLL++T+E
Sbjct: 150 LH----SGSNGTSLISLPRDSYVTIPAWTDSKGKQHALSKNKLNAAYAFGDAPLLIKTIE 205

Query: 229 QATGLRIDHYAEIGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGY 288
            +TG+RIDH+AE+GFGGF ++ DA+GGV +CL +P+ D L+G DL  GCQ L+G   L Y
Sbjct: 206 VSTGVRIDHFAEVGFGGFVKVTDAVGGVHLCLDKPLKDELSGADLKAGCQTLNGAQGLAY 265

Query: 289 VRSR-ATPRADLDRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHV 347
           VR R + P  D+ RM  QR F++AL  +  S  V LNP++   V   + AA  VD G ++
Sbjct: 266 VRDRYSDPLGDIGRMQRQRTFLAALAHKVSSTGVILNPFKLVPVLDNSLAAFKVDNGTNL 325

Query: 348 FDLARLGWAL------HGHPTALTVPIGEFTTTDVGSVVVWNHDAAAEMFDALASDTPIP 401
            DL  +   +      +GH   + +   ++    VGS ++W+   A +++ A+ +DT +P
Sbjct: 326 SDLYDMFQHMKGVSGSNGHTIVVPIANEDYNVPGVGSCILWDKTKAGQLWSAVINDTTMP 385

Query: 402 A 402
           A
Sbjct: 386 A 386


>tr|C7NFG6|C7NFG6_KYTSD Tax_Id=478801 SubName: Full=Cell
           envelope-related function transcriptional attenuator
           common domain protein;[Kytococcus sedentarius]
          Length = 394

 Score =  217 bits (553), Expect = 2e-54
 Identities = 127/288 (44%), Positives = 175/288 (60%), Gaps = 9/288 (3%)

Query: 121 ALHREPVLRDYADRPGPGRGTNWLIVGSDSRQGLTTEQQRELXXXXXXXXXXXXXILLVH 180
           ++ R   +  +  RP    G N+L+VGSD R  LT EQ++ L             I+LVH
Sbjct: 110 SVERTDAMPTWEGRPADTAGRNYLLVGSDGRDSLTPEQRKRLGTGAMEGQRTDT-IMLVH 168

Query: 181 LAGLGSSTPTALVSIPRDSYVPVPGYGRDKINAAFAIGGAPLLVQTVEQATGLRIDHYAE 240
           +   G  TPT LVSIPRDSYVP+ G G +KINA++ +GGAPLL+ TVEQ TGLRID Y E
Sbjct: 169 VPTFG--TPT-LVSIPRDSYVPIRGMGENKINASYNVGGAPLLIDTVEQNTGLRIDGYTE 225

Query: 241 IGFGGFAELVDALGGVRMCLTEPIGDPLAGIDLAPGCQQLDGRSALGYVRSR-ATPRADL 299
           IGFGGFA++VD+LGGV +C    I D  A +D+  GCQ +DG +ALG+VR+R   PR DL
Sbjct: 226 IGFGGFADVVDSLGGVEICAKTDIVDEKAHLDIKAGCQTMDGVTALGFVRARYFDPRGDL 285

Query: 300 DRMINQRQFMSALLRRAESPAVWLNPWRWYSVPRAAAAALTVDQGAHVFDLARLGWALH- 358
            R+  QRQF++A+ ++  SP+  L PW  + V  A A ALTVD+     ++A    A+  
Sbjct: 286 GRVERQRQFLNAISKQVVSPSTLLLPWELHDVGTAVAPALTVDEHDSGLEIAMALNAVRR 345

Query: 359 --GHPTALTVPIGEFT-TTDVGSVVVWNHDAAAEMFDALASDTPIPAD 403
             G    +TVP+ + T  T+ G  V W+ + +  ++ AL     IP+D
Sbjct: 346 ASGGDNQVTVPVSDSTLRTEHGWAVQWDSERSEALWKALREGDDIPSD 393


  Database: Amellifera_nr
    Posted date:  Feb 5, 2010  5:10 AM
  Number of letters in database: 3,846,993,858
  Number of sequences in database:  11,275,203
  
Lambda     K      H
   0.320    0.138    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 11275203
Number of Hits to DB: 2,538,247,981
Number of extensions: 97017922
Number of successful extensions: 236038
Number of sequences better than 10.0: 2398
Number of HSP's gapped: 233424
Number of HSP's successfully gapped: 2405
Length of query: 409
Length of database: 3,846,993,858
Length adjustment: 140
Effective length of query: 269
Effective length of database: 2,268,465,438
Effective search space: 610217202822
Effective search space used: 610217202822
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)