BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_5437 (95 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HMS5|B2HMS5_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 160 6e-38 tr|Q7TVH4|Q7TVH4_MYCBO Tax_Id=1765 (whiB6)SubName: Full=PUTATIVE... 142 1e-32 tr|P96215|P96215_MYCTU Tax_Id=1773 (whiB6)SubName: Full=POSSIBLE... 142 1e-32 tr|C6DP92|C6DP92_MYCTK Tax_Id=478434 SubName: Full=Transcription... 142 1e-32 tr|C1AIW8|C1AIW8_MYCBT Tax_Id=561275 (whiB6)SubName: Full=Putati... 142 1e-32 tr|A5U9J0|A5U9J0_MYCTA Tax_Id=419947 (whiB6)SubName: Full=Putati... 142 1e-32 tr|A1KQJ7|A1KQJ7_MYCBP Tax_Id=410289 (whiB6)SubName: Full=Putati... 142 1e-32 tr|A5WU83|A5WU83_MYCTF Tax_Id=336982 SubName: Full=Transcription... 142 1e-32 tr|A4KMX8|A4KMX8_MYCTU Tax_Id=395095 SubName: Full=Transcription... 142 1e-32 tr|A2VMN7|A2VMN7_MYCTU Tax_Id=348776 SubName: Full=Transcription... 142 1e-32 tr|Q1BG05|Q1BG05_MYCSS Tax_Id=164756 SubName: Full=Transcription... 108 2e-22 tr|A3PSI3|A3PSI3_MYCSJ Tax_Id=164757 SubName: Full=Transcription... 108 2e-22 tr|A1U8X7|A1U8X7_MYCSK Tax_Id=189918 SubName: Full=Transcription... 108 2e-22 tr|A0QNI1|A0QNI1_MYCS2 Tax_Id=246196 SubName: Full=Transcription... 102 2e-20 tr|A4T4Z0|A4T4Z0_MYCGI Tax_Id=350054 SubName: Full=Transcription... 99 1e-19 tr|A1T168|A1T168_MYCVP Tax_Id=350058 SubName: Full=Transcription... 97 6e-19 tr|A4T8F0|A4T8F0_MYCGI Tax_Id=350054 SubName: Full=Transcription... 90 7e-17 tr|A1TD05|A1TD05_MYCVP Tax_Id=350058 SubName: Full=Transcription... 89 2e-16 tr|A1UPL1|A1UPL1_MYCSK Tax_Id=189918 SubName: Full=Putative unch... 64 6e-09 >tr|B2HMS5|B2HMS5_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 95 Score = 160 bits (404), Expect = 6e-38 Identities = 81/95 (85%), Positives = 81/95 (85%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTL VESPGAEGLWAGVV Sbjct: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLCRACPRRWACARDAVESPGAEGLWAGVV 60 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARERITAQSA 95 IPEAGRARAFALGQLRSLAERNGFPARERITAQSA Sbjct: 61 IPEAGRARAFALGQLRSLAERNGFPARERITAQSA 95 >tr|Q7TVH4|Q7TVH4_MYCBO Tax_Id=1765 (whiB6)SubName: Full=PUTATIVE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB6;[Mycobacterium bovis] Length = 116 Score = 142 bits (358), Expect = 1e-32 Identities = 71/96 (73%), Positives = 78/96 (81%), Gaps = 1/96 (1%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MT TALYE+PLGVCTQDPDRWTTTPD+EAKTL VES GAEGLWAGVV Sbjct: 21 MTVTALYEVPLGVCTQDPDRWTTTPDDEAKTLCRACPRRWLCARDAVESAGAEGLWAGVV 80 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARE-RITAQSA 95 IPE+GRARAFALGQLRSLAERNG+P R+ R++AQSA Sbjct: 81 IPESGRARAFALGQLRSLAERNGYPVRDHRVSAQSA 116 >tr|P96215|P96215_MYCTU Tax_Id=1773 (whiB6)SubName: Full=POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN WHIB-LIKE WHIB6; SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 116 Score = 142 bits (358), Expect = 1e-32 Identities = 71/96 (73%), Positives = 78/96 (81%), Gaps = 1/96 (1%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MT TALYE+PLGVCTQDPDRWTTTPD+EAKTL VES GAEGLWAGVV Sbjct: 21 MTVTALYEVPLGVCTQDPDRWTTTPDDEAKTLCRACPRRWLCARDAVESAGAEGLWAGVV 80 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARE-RITAQSA 95 IPE+GRARAFALGQLRSLAERNG+P R+ R++AQSA Sbjct: 81 IPESGRARAFALGQLRSLAERNGYPVRDHRVSAQSA 116 >tr|C6DP92|C6DP92_MYCTK Tax_Id=478434 SubName: Full=Transcriptional regulator whiB-like whiB6;[Mycobacterium tuberculosis] Length = 116 Score = 142 bits (358), Expect = 1e-32 Identities = 71/96 (73%), Positives = 78/96 (81%), Gaps = 1/96 (1%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MT TALYE+PLGVCTQDPDRWTTTPD+EAKTL VES GAEGLWAGVV Sbjct: 21 MTVTALYEVPLGVCTQDPDRWTTTPDDEAKTLCRACPRRWLCARDAVESAGAEGLWAGVV 80 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARE-RITAQSA 95 IPE+GRARAFALGQLRSLAERNG+P R+ R++AQSA Sbjct: 81 IPESGRARAFALGQLRSLAERNGYPVRDHRVSAQSA 116 >tr|C1AIW8|C1AIW8_MYCBT Tax_Id=561275 (whiB6)SubName: Full=Putative transcriptional regulatory protein WhiB-like;[Mycobacterium bovis] Length = 116 Score = 142 bits (358), Expect = 1e-32 Identities = 71/96 (73%), Positives = 78/96 (81%), Gaps = 1/96 (1%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MT TALYE+PLGVCTQDPDRWTTTPD+EAKTL VES GAEGLWAGVV Sbjct: 21 MTVTALYEVPLGVCTQDPDRWTTTPDDEAKTLCRACPRRWLCARDAVESAGAEGLWAGVV 80 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARE-RITAQSA 95 IPE+GRARAFALGQLRSLAERNG+P R+ R++AQSA Sbjct: 81 IPESGRARAFALGQLRSLAERNGYPVRDHRVSAQSA 116 >tr|A5U9J0|A5U9J0_MYCTA Tax_Id=419947 (whiB6)SubName: Full=Putative transcriptional regulatory protein whib-like WhiB6;[Mycobacterium tuberculosis] Length = 116 Score = 142 bits (358), Expect = 1e-32 Identities = 71/96 (73%), Positives = 78/96 (81%), Gaps = 1/96 (1%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MT TALYE+PLGVCTQDPDRWTTTPD+EAKTL VES GAEGLWAGVV Sbjct: 21 MTVTALYEVPLGVCTQDPDRWTTTPDDEAKTLCRACPRRWLCARDAVESAGAEGLWAGVV 80 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARE-RITAQSA 95 IPE+GRARAFALGQLRSLAERNG+P R+ R++AQSA Sbjct: 81 IPESGRARAFALGQLRSLAERNGYPVRDHRVSAQSA 116 >tr|A1KQJ7|A1KQJ7_MYCBP Tax_Id=410289 (whiB6)SubName: Full=Putative transcriptional regulatory protein whiB-like whiB6;[Mycobacterium bovis] Length = 116 Score = 142 bits (358), Expect = 1e-32 Identities = 71/96 (73%), Positives = 78/96 (81%), Gaps = 1/96 (1%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MT TALYE+PLGVCTQDPDRWTTTPD+EAKTL VES GAEGLWAGVV Sbjct: 21 MTVTALYEVPLGVCTQDPDRWTTTPDDEAKTLCRACPRRWLCARDAVESAGAEGLWAGVV 80 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARE-RITAQSA 95 IPE+GRARAFALGQLRSLAERNG+P R+ R++AQSA Sbjct: 81 IPESGRARAFALGQLRSLAERNGYPVRDHRVSAQSA 116 >tr|A5WU83|A5WU83_MYCTF Tax_Id=336982 SubName: Full=Transcriptional regulatory protein whiB-like whiB6;[Mycobacterium tuberculosis] Length = 116 Score = 142 bits (358), Expect = 1e-32 Identities = 71/96 (73%), Positives = 78/96 (81%), Gaps = 1/96 (1%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MT TALYE+PLGVCTQDPDRWTTTPD+EAKTL VES GAEGLWAGVV Sbjct: 21 MTVTALYEVPLGVCTQDPDRWTTTPDDEAKTLCRACPRRWLCARDAVESAGAEGLWAGVV 80 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARE-RITAQSA 95 IPE+GRARAFALGQLRSLAERNG+P R+ R++AQSA Sbjct: 81 IPESGRARAFALGQLRSLAERNGYPVRDHRVSAQSA 116 >tr|A4KMX8|A4KMX8_MYCTU Tax_Id=395095 SubName: Full=Transcriptional regulatory protein whiB-like whiB6;[Mycobacterium tuberculosis str. Haarlem] Length = 116 Score = 142 bits (358), Expect = 1e-32 Identities = 71/96 (73%), Positives = 78/96 (81%), Gaps = 1/96 (1%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MT TALYE+PLGVCTQDPDRWTTTPD+EAKTL VES GAEGLWAGVV Sbjct: 21 MTVTALYEVPLGVCTQDPDRWTTTPDDEAKTLCRACPRRWLCARDAVESAGAEGLWAGVV 80 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARE-RITAQSA 95 IPE+GRARAFALGQLRSLAERNG+P R+ R++AQSA Sbjct: 81 IPESGRARAFALGQLRSLAERNGYPVRDHRVSAQSA 116 >tr|A2VMN7|A2VMN7_MYCTU Tax_Id=348776 SubName: Full=Transcriptional regulatory protein whiB-like whiB6;[Mycobacterium tuberculosis C] Length = 116 Score = 142 bits (358), Expect = 1e-32 Identities = 71/96 (73%), Positives = 78/96 (81%), Gaps = 1/96 (1%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MT TALYE+PLGVCTQDPDRWTTTPD+EAKTL VES GAEGLWAGVV Sbjct: 21 MTVTALYEVPLGVCTQDPDRWTTTPDDEAKTLCRACPRRWLCARDAVESAGAEGLWAGVV 80 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARE-RITAQSA 95 IPE+GRARAFALGQLRSLAERNG+P R+ R++AQSA Sbjct: 81 IPESGRARAFALGQLRSLAERNGYPVRDHRVSAQSA 116 >tr|Q1BG05|Q1BG05_MYCSS Tax_Id=164756 SubName: Full=Transcription factor WhiB;[Mycobacterium sp.] Length = 97 Score = 108 bits (270), Expect = 2e-22 Identities = 54/97 (55%), Positives = 64/97 (65%), Gaps = 2/97 (2%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 M+ E+P+G CT+DP+RWTTT DEEAK + VE P AEGLWAG+V Sbjct: 1 MSNVTFLEVPVGACTRDPERWTTTADEEAKAICRGCPRRWMCARDAVELPRAEGLWAGIV 60 Query: 61 IPEAGRARAFALGQLRSLAERNGFPAR--ERITAQSA 95 IPEAGR R FAL QLRSLAERNG+P R R+ +SA Sbjct: 61 IPEAGRGRTFALKQLRSLAERNGYPVRAIRRVFPESA 97 >tr|A3PSI3|A3PSI3_MYCSJ Tax_Id=164757 SubName: Full=Transcription factor WhiB;[Mycobacterium sp.] Length = 97 Score = 108 bits (270), Expect = 2e-22 Identities = 54/97 (55%), Positives = 64/97 (65%), Gaps = 2/97 (2%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 M+ E+P+G CT+DP+RWTTT DEEAK + VE P AEGLWAG+V Sbjct: 1 MSNVTFLEVPVGACTRDPERWTTTADEEAKAICRGCPRRWMCARDAVELPRAEGLWAGIV 60 Query: 61 IPEAGRARAFALGQLRSLAERNGFPAR--ERITAQSA 95 IPEAGR R FAL QLRSLAERNG+P R R+ +SA Sbjct: 61 IPEAGRGRTFALKQLRSLAERNGYPVRAIRRVFPESA 97 >tr|A1U8X7|A1U8X7_MYCSK Tax_Id=189918 SubName: Full=Transcription factor WhiB;[Mycobacterium sp.] Length = 97 Score = 108 bits (270), Expect = 2e-22 Identities = 54/97 (55%), Positives = 64/97 (65%), Gaps = 2/97 (2%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 M+ E+P+G CT+DP+RWTTT DEEAK + VE P AEGLWAG+V Sbjct: 1 MSNVTFLEVPVGACTRDPERWTTTADEEAKAICRGCPRRWMCARDAVELPRAEGLWAGIV 60 Query: 61 IPEAGRARAFALGQLRSLAERNGFPAR--ERITAQSA 95 IPEAGR R FAL QLRSLAERNG+P R R+ +SA Sbjct: 61 IPEAGRGRTFALKQLRSLAERNGYPVRAIRRVFPESA 97 >tr|A0QNI1|A0QNI1_MYCS2 Tax_Id=246196 SubName: Full=Transcription factor WhiB family protein;[Mycobacterium smegmatis] Length = 97 Score = 102 bits (253), Expect = 2e-20 Identities = 48/88 (54%), Positives = 58/88 (65%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 MTA IPLGVCT DP+RWT+ PD +AK + E P AEGLWAG++ Sbjct: 1 MTALMTNGIPLGVCTSDPERWTSAPDAQAKVICRECPRRWLCAREACELPRAEGLWAGIM 60 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARE 88 +PE+GR R FAL QLRSLAERNG+P R+ Sbjct: 61 VPESGRGRTFALKQLRSLAERNGYPVRK 88 >tr|A4T4Z0|A4T4Z0_MYCGI Tax_Id=350054 SubName: Full=Transcription factor WhiB;[Mycobacterium gilvum] Length = 97 Score = 99.4 bits (246), Expect = 1e-19 Identities = 46/89 (51%), Positives = 59/89 (66%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 M A + + P+G CT+DP+RWTTT D++AK + ESP AEGLWAG+ Sbjct: 1 MNAKSWDDTPIGECTRDPERWTTTADDDAKAICRSCPRRWLCAREAYESPRAEGLWAGIY 60 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARER 89 +PEAGR R FAL QL+SLAE+NG+P ER Sbjct: 61 VPEAGRGRTFALRQLKSLAEQNGYPVGER 89 >tr|A1T168|A1T168_MYCVP Tax_Id=350058 SubName: Full=Transcription factor WhiB;[Mycobacterium vanbaalenii] Length = 97 Score = 97.1 bits (240), Expect = 6e-19 Identities = 46/89 (51%), Positives = 57/89 (64%) Query: 1 MTATALYEIPLGVCTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVV 60 M A E P+G CT+DP+RWTTT D+EAK + ESP EGLWAG+ Sbjct: 1 MNAIPWDETPIGECTRDPERWTTTADDEAKAICRSCPRRWLCAREACESPRVEGLWAGIY 60 Query: 61 IPEAGRARAFALGQLRSLAERNGFPARER 89 +PEAGR R FAL QL+SLAE++G+ RER Sbjct: 61 VPEAGRGRTFALRQLKSLAEQHGYTVRER 89 >tr|A4T8F0|A4T8F0_MYCGI Tax_Id=350054 SubName: Full=Transcription factor WhiB;[Mycobacterium gilvum] Length = 90 Score = 90.1 bits (222), Expect = 7e-17 Identities = 44/76 (57%), Positives = 49/76 (64%) Query: 14 CTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVVIPEAGRARAFALG 73 CT+DPDRWTTT D+ AK L +PGA GLWAG+V+PE GR R FAL Sbjct: 15 CTRDPDRWTTTADDGAKALCRACPRRWQCAKEACVTPGAVGLWAGIVLPEGGRNRQFALK 74 Query: 74 QLRSLAERNGFPARER 89 QLRSLAERNGF R R Sbjct: 75 QLRSLAERNGFSVRRR 90 >tr|A1TD05|A1TD05_MYCVP Tax_Id=350058 SubName: Full=Transcription factor WhiB;[Mycobacterium vanbaalenii] Length = 102 Score = 89.0 bits (219), Expect = 2e-16 Identities = 44/76 (57%), Positives = 49/76 (64%) Query: 14 CTQDPDRWTTTPDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVVIPEAGRARAFALG 73 CT+DPDRW T DE AK+L +PGA GLWAG+V+PE GR R FAL Sbjct: 27 CTRDPDRWMVTADEGAKSLCRACPRRWQCARDACVTPGAVGLWAGIVLPEGGRNRQFALK 86 Query: 74 QLRSLAERNGFPARER 89 QLRSLAERNGF AR R Sbjct: 87 QLRSLAERNGFSARRR 102 >tr|A1UPL1|A1UPL1_MYCSK Tax_Id=189918 SubName: Full=Putative uncharacterized protein;[Mycobacterium sp.] Length = 117 Score = 63.9 bits (154), Expect = 6e-09 Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 14 CTQDPDRWTTT-PDEEAKTLXXXXXXXXXXXXXXVESPGAEGLWAGVVIPEAGRARAFAL 72 C DPDRW D E K L +++PGAEG+W+GV IP+ GR R FAL Sbjct: 38 CISDPDRWAAGGQDPELKALCRGCPRRWQCAKDALDTPGAEGMWSGVHIPKEGRGRKFAL 97 Query: 73 GQLRSLAERNG 83 QLRSLA G Sbjct: 98 RQLRSLAAHGG 108 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.315 0.130 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 626,275,025 Number of extensions: 17279731 Number of successful extensions: 35552 Number of sequences better than 10.0: 19 Number of HSP's gapped: 35602 Number of HSP's successfully gapped: 19 Length of query: 95 Length of database: 3,846,993,858 Length adjustment: 64 Effective length of query: 31 Effective length of database: 3,125,380,866 Effective search space: 96886806846 Effective search space used: 96886806846 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 75 (33.5 bits)