BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_5568 (47 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|A0PX71|RL34_MYCUA Tax_Id=362242 (rpmH)RecName: Full=50S ribos... 95 3e-18 sp|B2HNT9|RL34_MYCMM Tax_Id=216594 (rpmH)RecName: Full=50S ribos... 95 3e-18 sp|Q1B0S1|RL34_MYCSS Tax_Id=164756 (rpmH)RecName: Full=50S ribos... 94 6e-18 sp|A1U8R9|RL34_MYCSK Tax_Id=189918 (rpmH)RecName: Full=50S ribos... 94 6e-18 sp|A3Q8S5|RL34_MYCSJ Tax_Id=164757 (rpmH)RecName: Full=50S ribos... 94 6e-18 sp|Q9L7L8|RL34_MYCPA Tax_Id=1770 (rpmH)RecName: Full=50S ribosom... 92 2e-17 sp|A0QND5|RL34_MYCA1 Tax_Id=243243 (rpmH)RecName: Full=50S ribos... 92 2e-17 sp|B1MN97|RL34_MYCA9 Tax_Id=561007 (rpmH)RecName: Full=50S ribos... 89 2e-16 sp|P0C562|RL34_MYCSM Tax_Id=1772 (rpmH)RecName: Full=50S ribosom... 88 3e-16 sp|A0R7K0|RL34_MYCS2 Tax_Id=246196 (rpmH)RecName: Full=50S ribos... 88 3e-16 sp|Q0SAG8|RL34_RHOSR Tax_Id=101510 (rpmH)RecName: Full=50S ribos... 88 3e-16 sp|C1B7S6|RL34_RHOOB Tax_Id=632772 (rpmH)RecName: Full=50S ribos... 88 3e-16 sp|A1TI30|RL34_MYCVP Tax_Id=350058 (rpmH)RecName: Full=50S ribos... 88 3e-16 sp|P46386|RL34_MYCLE Tax_Id=1769 (rpmH)RecName: Full=50S ribosom... 88 3e-16 sp|B8ZTN7|RL34_MYCLB Tax_Id=561304 (rpmH)RecName: Full=50S ribos... 88 3e-16 sp|A4T4T9|RL34_MYCGI Tax_Id=350054 (rpmH)RecName: Full=50S ribos... 88 3e-16 sp|C0ZVP8|RL34_RHOE4 Tax_Id=234621 (rpmH)RecName: Full=50S ribos... 87 6e-16 sp|Q5YMR6|RL34_NOCFA Tax_Id=37329 (rpmH)RecName: Full=50S riboso... 87 6e-16 tr|C3JLD6|C3JLD6_RHOER Tax_Id=596309 (rpmH)RecName: Full=50S rib... 87 6e-16 sp|Q6M1C1|RL34_CORGL Tax_Id=1718 (rpmH)RecName: Full=50S ribosom... 86 1e-15 sp|A4QIE6|RL34_CORGB Tax_Id=340322 (rpmH)RecName: Full=50S ribos... 86 1e-15 sp|P0A5W4|RL34_MYCTU Tax_Id=1773 (rpmH)RecName: Full=50S ribosom... 85 2e-15 sp|A5U9Q2|RL34_MYCTA Tax_Id=419947 (rpmH)RecName: Full=50S ribos... 85 2e-15 sp|C1AJ64|RL34_MYCBT Tax_Id=561275 (rpmH)RecName: Full=50S ribos... 85 2e-15 sp|P0A5W5|RL34_MYCBO Tax_Id=1765 (rpmH)RecName: Full=50S ribosom... 85 2e-15 tr|C6DPF4|C6DPF4_MYCTK Tax_Id=478434 RecName: Full=50S ribosomal... 85 2e-15 tr|A1KEG8|A1KEG8_MYCBP Tax_Id=410289 (rpmH_2)RecName: Full=50S r... 85 2e-15 tr|A5WUE5|A5WUE5_MYCTF Tax_Id=336982 RecName: Full=50S ribosomal... 85 2e-15 tr|A4KN32|A4KN32_MYCTU Tax_Id=395095 RecName: Full=50S ribosomal... 85 2e-15 tr|A2VMU3|A2VMU3_MYCTU Tax_Id=348776 RecName: Full=50S ribosomal... 85 2e-15 sp|A4FR78|RL34_SACEN Tax_Id=405948 (rpmH)RecName: Full=50S ribos... 85 3e-15 sp|Q4JSC1|RL34_CORJK Tax_Id=306537 (rpmH)RecName: Full=50S ribos... 85 3e-15 sp|Q8FSU7|RL34_COREF Tax_Id=152794 (rpmH)RecName: Full=50S ribos... 85 3e-15 tr|C8RVF8|C8RVF8_CORJE Tax_Id=525262 (rpmH)SubName: Full=Conserv... 85 3e-15 tr|C8NRW0|C8NRW0_COREF Tax_Id=196164 (rpmH)SubName: Full=Conserv... 85 3e-15 tr|D0L9D2|D0L9D2_GORB4 Tax_Id=526226 SubName: Full=Ribosomal pro... 84 5e-15 sp|Q6NE95|RL34_CORDI Tax_Id=1717 (rpmH)RecName: Full=50S ribosom... 83 9e-15 sp|C4LGJ8|RL34_CORK4 Tax_Id=645127 (rpmH)RecName: Full=50S ribos... 83 1e-14 sp|Q9ZB91|RL34_MYCAV Tax_Id=1764 (rpmH)RecName: Full=50S ribosom... 82 2e-14 tr|C2GFJ8|C2GFJ8_9CORY Tax_Id=548478 (rpmH)RecName: Full=50S rib... 82 2e-14 tr|C0VSM1|C0VSM1_9CORY Tax_Id=548477 (rpmH)RecName: Full=50S rib... 82 2e-14 sp|B1VJ38|RL34_CORU7 Tax_Id=504474 (rpmH)RecName: Full=50S ribos... 79 1e-13 tr|C5V925|C5V925_9CORY Tax_Id=553207 (rpmH)RecName: Full=50S rib... 79 1e-13 tr|C6WSM0|C6WSM0_ACTMD Tax_Id=446462 RecName: Full=50S ribosomal... 79 2e-13 sp|Q47K72|RL34_THEFY Tax_Id=269800 (rpmH)RecName: Full=50S ribos... 79 2e-13 sp|C3PL14|RL34_CORA7 Tax_Id=548476 (rpmH)RecName: Full=50S ribos... 79 2e-13 tr|C6R753|C6R753_9CORY Tax_Id=553206 (rpmH)RecName: Full=50S rib... 79 2e-13 tr|C2BLB2|C2BLB2_9CORY Tax_Id=525264 (rpmH)RecName: Full=50S rib... 79 2e-13 tr|C0U7U7|C0U7U7_9ACTO Tax_Id=526225 RecName: Full=50S ribosomal... 77 5e-13 tr|C0XTH9|C0XTH9_9CORY Tax_Id=525263 (rpmH)RecName: Full=50S rib... 77 6e-13 >sp|A0PX71|RL34_MYCUA Tax_Id=362242 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium ulcerans] Length = 47 Score = 94.7 bits (234), Expect = 3e-18 Identities = 46/47 (97%), Positives = 47/47 (100%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 >sp|B2HNT9|RL34_MYCMM Tax_Id=216594 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium marinum] Length = 47 Score = 94.7 bits (234), Expect = 3e-18 Identities = 46/47 (97%), Positives = 47/47 (100%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 >sp|Q1B0S1|RL34_MYCSS Tax_Id=164756 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium sp.] Length = 47 Score = 93.6 bits (231), Expect = 6e-18 Identities = 45/47 (95%), Positives = 47/47 (100%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRR+LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRSLTA 47 >sp|A1U8R9|RL34_MYCSK Tax_Id=189918 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium sp.] Length = 47 Score = 93.6 bits (231), Expect = 6e-18 Identities = 45/47 (95%), Positives = 47/47 (100%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRR+LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRSLTA 47 >sp|A3Q8S5|RL34_MYCSJ Tax_Id=164757 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium sp.] Length = 47 Score = 93.6 bits (231), Expect = 6e-18 Identities = 45/47 (95%), Positives = 47/47 (100%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRR+LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRSLTA 47 >sp|Q9L7L8|RL34_MYCPA Tax_Id=1770 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium paratuberculosis] Length = 47 Score = 91.7 bits (226), Expect = 2e-17 Identities = 44/47 (93%), Positives = 47/47 (100%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+GRRRKGRRAL+A Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA 47 >sp|A0QND5|RL34_MYCA1 Tax_Id=243243 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium avium] Length = 47 Score = 91.7 bits (226), Expect = 2e-17 Identities = 44/47 (93%), Positives = 47/47 (100%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+GRRRKGRRAL+A Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSGRRRKGRRALSA 47 >sp|B1MN97|RL34_MYCA9 Tax_Id=561007 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium abscessus] Length = 47 Score = 89.0 bits (219), Expect = 2e-16 Identities = 42/47 (89%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRAR HGFRLRMRTRAGRAI+ GRRRKGRR LTA Sbjct: 1 MAKGKRTFQPNNRRRARTHGFRLRMRTRAGRAIIAGRRRKGRRELTA 47 >sp|P0C562|RL34_MYCSM Tax_Id=1772 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium smegmatis] Length = 47 Score = 88.2 bits (217), Expect = 3e-16 Identities = 43/47 (91%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV RR KGRRALTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 >sp|A0R7K0|RL34_MYCS2 Tax_Id=246196 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium smegmatis] Length = 47 Score = 88.2 bits (217), Expect = 3e-16 Identities = 43/47 (91%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV RR KGRRALTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVANRRSKGRRALTA 47 >sp|Q0SAG8|RL34_RHOSR Tax_Id=101510 (rpmH)RecName: Full=50S ribosomal protein L34;[Rhodococcus sp.] Length = 47 Score = 87.8 bits (216), Expect = 3e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RRRKGR +LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRESLTA 47 >sp|C1B7S6|RL34_RHOOB Tax_Id=632772 (rpmH)RecName: Full=50S ribosomal protein L34;[Rhodococcus opacus] Length = 47 Score = 87.8 bits (216), Expect = 3e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RRRKGR +LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRESLTA 47 >sp|A1TI30|RL34_MYCVP Tax_Id=350058 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium vanbaalenii] Length = 47 Score = 87.8 bits (216), Expect = 3e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRA+VHGFRLRMRTRAGRAIVT RR KGRR+LTA Sbjct: 1 MAKGKRTFQPNNRRRAKVHGFRLRMRTRAGRAIVTARRAKGRRSLTA 47 >sp|P46386|RL34_MYCLE Tax_Id=1769 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium leprae] Length = 47 Score = 87.8 bits (216), Expect = 3e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSDRRRKGRRTLTA 47 >sp|B8ZTN7|RL34_MYCLB Tax_Id=561304 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium leprae] Length = 47 Score = 87.8 bits (216), Expect = 3e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSDRRRKGRRTLTA 47 >sp|A4T4T9|RL34_MYCGI Tax_Id=350054 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium gilvum] Length = 47 Score = 87.8 bits (216), Expect = 3e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRA+VHGFRLRMRTRAGRAIVT RR KGRR+LTA Sbjct: 1 MAKGKRTFQPNNRRRAKVHGFRLRMRTRAGRAIVTARRAKGRRSLTA 47 >sp|C0ZVP8|RL34_RHOE4 Tax_Id=234621 (rpmH)RecName: Full=50S ribosomal protein L34;[Rhodococcus erythropolis] Length = 47 Score = 87.0 bits (214), Expect = 6e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RRRKGR +LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRDSLTA 47 >sp|Q5YMR6|RL34_NOCFA Tax_Id=37329 (rpmH)RecName: Full=50S ribosomal protein L34;[Nocardia farcinica] Length = 47 Score = 87.0 bits (214), Expect = 6e-16 Identities = 42/47 (89%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RRRKGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRATLTA 47 >tr|C3JLD6|C3JLD6_RHOER Tax_Id=596309 (rpmH)RecName: Full=50S ribosomal protein L34;[Rhodococcus erythropolis SK121] Length = 47 Score = 87.0 bits (214), Expect = 6e-16 Identities = 42/47 (89%), Positives = 45/47 (95%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV+ RRRKGR +LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVSARRRKGRDSLTA 47 >sp|Q6M1C1|RL34_CORGL Tax_Id=1718 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium glutamicum] Length = 47 Score = 86.3 bits (212), Expect = 1e-15 Identities = 42/47 (89%), Positives = 43/47 (91%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV RRRKGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVAARRRKGRAKLTA 47 >sp|A4QIE6|RL34_CORGB Tax_Id=340322 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium glutamicum] Length = 47 Score = 86.3 bits (212), Expect = 1e-15 Identities = 42/47 (89%), Positives = 43/47 (91%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV RRRKGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVAARRRKGRAKLTA 47 >sp|P0A5W4|RL34_MYCTU Tax_Id=1773 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis] Length = 47 Score = 85.1 bits (209), Expect = 2e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >sp|A5U9Q2|RL34_MYCTA Tax_Id=419947 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis] Length = 47 Score = 85.1 bits (209), Expect = 2e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >sp|C1AJ64|RL34_MYCBT Tax_Id=561275 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium bovis] Length = 47 Score = 85.1 bits (209), Expect = 2e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >sp|P0A5W5|RL34_MYCBO Tax_Id=1765 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium bovis] Length = 47 Score = 85.1 bits (209), Expect = 2e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|C6DPF4|C6DPF4_MYCTK Tax_Id=478434 RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis] Length = 47 Score = 85.1 bits (209), Expect = 2e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|A1KEG8|A1KEG8_MYCBP Tax_Id=410289 (rpmH_2)RecName: Full=50S ribosomal protein L34;[Mycobacterium bovis] Length = 47 Score = 85.1 bits (209), Expect = 2e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|A5WUE5|A5WUE5_MYCTF Tax_Id=336982 RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis] Length = 47 Score = 85.1 bits (209), Expect = 2e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|A4KN32|A4KN32_MYCTU Tax_Id=395095 RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis str. Haarlem] Length = 47 Score = 85.1 bits (209), Expect = 2e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >tr|A2VMU3|A2VMU3_MYCTU Tax_Id=348776 RecName: Full=50S ribosomal protein L34;[Mycobacterium tuberculosis C] Length = 47 Score = 85.1 bits (209), Expect = 2e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 + KGKRTFQPNNRRRARVHGFRLRMRTRAGR+IV+ RRRKGRR L+A Sbjct: 1 MTKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIVSSRRRKGRRTLSA 47 >sp|A4FR78|RL34_SACEN Tax_Id=405948 (rpmH)RecName: Full=50S ribosomal protein L34;[Saccharopolyspora erythraea] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 ++KGKRTFQPNNRRRAR HGFRLRMRTRAGRAIV GRRR+GR +LTA Sbjct: 1 MSKGKRTFQPNNRRRARKHGFRLRMRTRAGRAIVAGRRRRGRASLTA 47 >sp|Q4JSC1|RL34_CORJK Tax_Id=306537 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium jeikeium] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFR RMRTRAGRAIV+ RR KGR++LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVSARRNKGRKSLTA 47 >sp|Q8FSU7|RL34_COREF Tax_Id=152794 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium efficiens] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 41/47 (87%), Positives = 42/47 (89%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFR RMRTRAGRAIV RRRKGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVAARRRKGREKLTA 47 >tr|C8RVF8|C8RVF8_CORJE Tax_Id=525262 (rpmH)SubName: Full=Conserved domain protein;[Corynebacterium jeikeium ATCC 43734] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 40/47 (85%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFR RMRTRAGRAIV+ RR KGR++LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVSARRNKGRKSLTA 47 >tr|C8NRW0|C8NRW0_COREF Tax_Id=196164 (rpmH)SubName: Full=Conserved domain protein;[Corynebacterium efficiens YS-314] Length = 47 Score = 84.7 bits (208), Expect = 3e-15 Identities = 41/47 (87%), Positives = 42/47 (89%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFR RMRTRAGRAIV RRRKGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVAARRRKGREKLTA 47 >tr|D0L9D2|D0L9D2_GORB4 Tax_Id=526226 SubName: Full=Ribosomal protein L34;[Gordonia bronchialis] Length = 47 Score = 84.0 bits (206), Expect = 5e-15 Identities = 41/47 (87%), Positives = 42/47 (89%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIV RR KGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVNSRRTKGRAKLTA 47 >sp|Q6NE95|RL34_CORDI Tax_Id=1717 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium diphtheriae] Length = 47 Score = 83.2 bits (204), Expect = 9e-15 Identities = 39/47 (82%), Positives = 43/47 (91%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRAR HGFR+RMRTRAGRAIV RR KGR++LTA Sbjct: 1 MAKGKRTFQPNNRRRARKHGFRIRMRTRAGRAIVAARRNKGRKSLTA 47 >sp|C4LGJ8|RL34_CORK4 Tax_Id=645127 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium kroppenstedtii] Length = 47 Score = 82.8 bits (203), Expect = 1e-14 Identities = 39/47 (82%), Positives = 44/47 (93%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRR+RVHGFR RM TRAGRAIV+ RRRKGR++LTA Sbjct: 1 MAKGKRTFQPNNRRRSRVHGFRSRMSTRAGRAIVSARRRKGRKSLTA 47 >sp|Q9ZB91|RL34_MYCAV Tax_Id=1764 (rpmH)RecName: Full=50S ribosomal protein L34;[Mycobacterium avium] Length = 46 Score = 82.0 bits (201), Expect = 2e-14 Identities = 41/47 (87%), Positives = 45/47 (95%), Gaps = 1/47 (2%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFRLRMR +GRAIV+GRRRKGRRAL+A Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRLRMR-NSGRAIVSGRRRKGRRALSA 46 >tr|C2GFJ8|C2GFJ8_9CORY Tax_Id=548478 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium glucuronolyticum ATCC 51866] Length = 47 Score = 82.0 bits (201), Expect = 2e-14 Identities = 39/47 (82%), Positives = 43/47 (91%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFR RMRTRAGRAIV+ RR+KGR L+A Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVSARRKKGRARLSA 47 >tr|C0VSM1|C0VSM1_9CORY Tax_Id=548477 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium glucuronolyticum ATCC 51867] Length = 47 Score = 82.0 bits (201), Expect = 2e-14 Identities = 39/47 (82%), Positives = 43/47 (91%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRARVHGFR RMRTRAGRAIV+ RR+KGR L+A Sbjct: 1 MAKGKRTFQPNNRRRARVHGFRTRMRTRAGRAIVSARRKKGRARLSA 47 >sp|B1VJ38|RL34_CORU7 Tax_Id=504474 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium urealyticum] Length = 45 Score = 79.3 bits (194), Expect = 1e-13 Identities = 37/43 (86%), Positives = 41/43 (95%) Query: 5 KRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 KRT+QPNNRRRARVHGFR RMRTRAGRAIV+ RRRKGR++LTA Sbjct: 3 KRTYQPNNRRRARVHGFRTRMRTRAGRAIVSARRRKGRKSLTA 45 >tr|C5V925|C5V925_9CORY Tax_Id=553207 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium matruchotii ATCC 14266] Length = 47 Score = 79.3 bits (194), Expect = 1e-13 Identities = 38/47 (80%), Positives = 40/47 (85%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 + KGKRTFQPNNRRRAR HGFR+RMRTRAGRAIV RR KGR LTA Sbjct: 1 MTKGKRTFQPNNRRRARKHGFRIRMRTRAGRAIVAARRSKGRAKLTA 47 >tr|C6WSM0|C6WSM0_ACTMD Tax_Id=446462 RecName: Full=50S ribosomal protein L34;[Actinosynnema mirum] Length = 47 Score = 79.0 bits (193), Expect = 2e-13 Identities = 36/47 (76%), Positives = 43/47 (91%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 ++KGKRTFQPNNRRRA+ HGFRLRMRTRAGRAI++ RR KGR+ L+A Sbjct: 1 MSKGKRTFQPNNRRRAKTHGFRLRMRTRAGRAILSARRTKGRKQLSA 47 >sp|Q47K72|RL34_THEFY Tax_Id=269800 (rpmH)RecName: Full=50S ribosomal protein L34;[Thermobifida fusca] Length = 47 Score = 78.6 bits (192), Expect = 2e-13 Identities = 36/42 (85%), Positives = 39/42 (92%) Query: 5 KRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALT 46 KRT+QPNNRRRAR HGFRLRMRTRAGRAI+ RRRKGR+ALT Sbjct: 3 KRTYQPNNRRRARTHGFRLRMRTRAGRAIIAARRRKGRKALT 44 >sp|C3PL14|RL34_CORA7 Tax_Id=548476 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium aurimucosum] Length = 47 Score = 78.6 bits (192), Expect = 2e-13 Identities = 38/47 (80%), Positives = 40/47 (85%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRAR HGFR RM TRAGRAIV RR+KGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARKHGFRTRMSTRAGRAIVAARRKKGRAKLTA 47 >tr|C6R753|C6R753_9CORY Tax_Id=553206 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium tuberculostearicum SK141] Length = 47 Score = 78.6 bits (192), Expect = 2e-13 Identities = 38/47 (80%), Positives = 40/47 (85%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRAR HGFR RM TRAGRAIV RR+KGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARKHGFRTRMSTRAGRAIVAARRKKGRAKLTA 47 >tr|C2BLB2|C2BLB2_9CORY Tax_Id=525264 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium pseudogenitalium ATCC 33035] Length = 47 Score = 78.6 bits (192), Expect = 2e-13 Identities = 38/47 (80%), Positives = 40/47 (85%) Query: 1 VAKGKRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 +AKGKRTFQPNNRRRAR HGFR RM TRAGRAIV RR+KGR LTA Sbjct: 1 MAKGKRTFQPNNRRRARKHGFRTRMSTRAGRAIVAARRKKGRAKLTA 47 >tr|C0U7U7|C0U7U7_9ACTO Tax_Id=526225 RecName: Full=50S ribosomal protein L34;[Geodermatophilus obscurus DSM 43160] Length = 45 Score = 77.4 bits (189), Expect = 5e-13 Identities = 36/43 (83%), Positives = 39/43 (90%) Query: 5 KRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 KRTFQPNNRRR++ HGFRLRMRTRAGRAIV GRRRKGR L+A Sbjct: 3 KRTFQPNNRRRSKTHGFRLRMRTRAGRAIVAGRRRKGREKLSA 45 >tr|C0XTH9|C0XTH9_9CORY Tax_Id=525263 (rpmH)RecName: Full=50S ribosomal protein L34;[Corynebacterium lipophiloflavum DSM 44291] Length = 45 Score = 77.0 bits (188), Expect = 6e-13 Identities = 37/43 (86%), Positives = 39/43 (90%) Query: 5 KRTFQPNNRRRARVHGFRLRMRTRAGRAIVTGRRRKGRRALTA 47 KRTFQPNNRRRAR HGFR RMRTRAGRAIV+ RRRKGR +LTA Sbjct: 3 KRTFQPNNRRRARKHGFRARMRTRAGRAIVSARRRKGRSSLTA 45 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.332 0.139 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 281,255,120 Number of extensions: 6316632 Number of successful extensions: 27700 Number of sequences better than 10.0: 1743 Number of HSP's gapped: 27773 Number of HSP's successfully gapped: 1743 Length of query: 47 Length of database: 3,846,993,858 Length adjustment: 21 Effective length of query: 26 Effective length of database: 3,610,214,595 Effective search space: 93865579470 Effective search space used: 93865579470 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.5 bits) S2: 75 (33.5 bits)