BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MMAR_5576 (91 letters) Database: Amellifera_nr; Agambiae_nr; Cfamiliaris_nr; Cbriggsae_nr; Celegans_nr; swiss_varsplic_nr; Dmelanogaster_nr; Drerio_nr; trembl_nr; Ggallus_nr; Hsapiens_nr; Mmusculus_nr; Ptroglodytes_nr; Rnorvegicus_nr; Tnigroviridis_nr; swiss_nr; wormpep_nr; yeastpep_nr; Aaegypti_nr; Btaurus_nr; Cintestinalis_nr; Mdomestica_nr; Mmulatta_nr; Scerevisiae_nr; Xtropicalis_nr; Csavignyi_nr; Dnovemcinctus_nr; Etelfairi_nr; Gaculeatus_nr; Lafricana_nr; Ocuniculus_nr; Trubripes_nr; Pberghei_nr; Pchabaudi_nr; Pfalciparum_nr; Pvivax_nr; Pyoelii_nr; Tgondii_nr; Pknowlesi_nr; Cporcellus_nr; Eeuropaeus_nr; Fcatus_nr; Mlucifugus_nr; Mmurinus_nr; Oanatinus_nr; Ogarnettii_nr; Olatipes_nr; Oprinceps_nr; Saraneus_nr; Stridecemlineatus_nr; Tbelangeri_nr; Ecaballus_nr; Ppygmaeus_nr 11,275,203 sequences; 3,846,993,858 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr|B2HR84|B2HR84_MYCMM Tax_Id=216594 SubName: Full=Putative unch... 132 2e-29 tr|A0PUL9|A0PUL9_MYCUA Tax_Id=362242 SubName: Full=Putative unch... 129 1e-28 sp|P64932|Y2101_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized ... 70 6e-11 sp|P64931|Y2076_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized ... 70 6e-11 tr|C6DPZ0|C6DPZ0_MYCTK Tax_Id=478434 SubName: Full=Putative unch... 70 6e-11 tr|C1APZ4|C1APZ4_MYCBT Tax_Id=561275 SubName: Full=Putative unch... 70 6e-11 tr|A5U4A1|A5U4A1_MYCTA Tax_Id=419947 SubName: Full=Putative unch... 70 6e-11 tr|A1KKC1|A1KKC1_MYCBP Tax_Id=410289 SubName: Full=Putative unch... 70 6e-11 tr|Q8A2L5|Q8A2L5_BACTN Tax_Id=818 SubName: Full=Putative integra... 36 1.6 tr|Q47P39|Q47P39_THEFY Tax_Id=269800 SubName: Full=Putative unch... 35 2.1 tr|Q4C1N8|Q4C1N8_CROWT Tax_Id=165597 SubName: Full=Similar to in... 35 2.7 >tr|B2HR84|B2HR84_MYCMM Tax_Id=216594 SubName: Full=Putative uncharacterized protein;[Mycobacterium marinum] Length = 91 Score = 132 bits (331), Expect = 2e-29 Identities = 70/91 (76%), Positives = 71/91 (78%) Query: 1 VPPNSTTYXXXXXXXXXXXXXXXXXXXXRLRPGVLHARRYVAIMGVAWLLLAVSAIANAI 60 +PPNSTTY RLRPGVLHARRYVAIMGVAWLLLAVSAIANAI Sbjct: 1 MPPNSTTYLVIAVAVVAACLAGAIAGFARLRPGVLHARRYVAIMGVAWLLLAVSAIANAI 60 Query: 61 RGSLWGTVGSLVLLVLIPTAVYSKLRNSSPS 91 RGSLWGTVGSLVLLVLIPTAVYSKLRNSSPS Sbjct: 61 RGSLWGTVGSLVLLVLIPTAVYSKLRNSSPS 91 >tr|A0PUL9|A0PUL9_MYCUA Tax_Id=362242 SubName: Full=Putative uncharacterized protein;[Mycobacterium ulcerans] Length = 91 Score = 129 bits (323), Expect = 1e-28 Identities = 68/91 (74%), Positives = 70/91 (76%) Query: 1 VPPNSTTYXXXXXXXXXXXXXXXXXXXXRLRPGVLHARRYVAIMGVAWLLLAVSAIANAI 60 +PPNSTTY RLRPGVLHARRYVAIMG AWLLLAVSAIANAI Sbjct: 1 MPPNSTTYLVIAVAVVAACLAGAIAGFARLRPGVLHARRYVAIMGFAWLLLAVSAIANAI 60 Query: 61 RGSLWGTVGSLVLLVLIPTAVYSKLRNSSPS 91 RGSLWGTVGSLVLLVLIPTAVYSKLRN+SPS Sbjct: 61 RGSLWGTVGSLVLLVLIPTAVYSKLRNNSPS 91 >sp|P64932|Y2101_MYCBO Tax_Id=1765 RecName: Full=Uncharacterized protein Mb2101c;[Mycobacterium bovis] Length = 83 Score = 70.5 bits (171), Expect = 6e-11 Identities = 35/56 (62%), Positives = 41/56 (73%) Query: 33 GVLHARRYVAIMGVAWLLLAVSAIANAIRGSLWGTVGSLVLLVLIPTAVYSKLRNS 88 G L Y A MGVAW+LLA+SAIANA++GSLW + SL LLVLIP VY K+R S Sbjct: 19 GRLRGGCYFAFMGVAWVLLAISAIANAVKGSLWWDIWSLGLLVLIPAVVYGKMRRS 74 >sp|P64931|Y2076_MYCTU Tax_Id=1773 RecName: Full=Uncharacterized protein Rv2076c/MT2136;[Mycobacterium tuberculosis] Length = 83 Score = 70.5 bits (171), Expect = 6e-11 Identities = 35/56 (62%), Positives = 41/56 (73%) Query: 33 GVLHARRYVAIMGVAWLLLAVSAIANAIRGSLWGTVGSLVLLVLIPTAVYSKLRNS 88 G L Y A MGVAW+LLA+SAIANA++GSLW + SL LLVLIP VY K+R S Sbjct: 19 GRLRGGCYFAFMGVAWVLLAISAIANAVKGSLWWDIWSLGLLVLIPAVVYGKMRRS 74 >tr|C6DPZ0|C6DPZ0_MYCTK Tax_Id=478434 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 83 Score = 70.5 bits (171), Expect = 6e-11 Identities = 35/56 (62%), Positives = 41/56 (73%) Query: 33 GVLHARRYVAIMGVAWLLLAVSAIANAIRGSLWGTVGSLVLLVLIPTAVYSKLRNS 88 G L Y A MGVAW+LLA+SAIANA++GSLW + SL LLVLIP VY K+R S Sbjct: 19 GRLRGGCYFAFMGVAWVLLAISAIANAVKGSLWWDIWSLGLLVLIPAVVYGKMRRS 74 >tr|C1APZ4|C1APZ4_MYCBT Tax_Id=561275 SubName: Full=Putative uncharacterized protein;[Mycobacterium bovis] Length = 83 Score = 70.5 bits (171), Expect = 6e-11 Identities = 35/56 (62%), Positives = 41/56 (73%) Query: 33 GVLHARRYVAIMGVAWLLLAVSAIANAIRGSLWGTVGSLVLLVLIPTAVYSKLRNS 88 G L Y A MGVAW+LLA+SAIANA++GSLW + SL LLVLIP VY K+R S Sbjct: 19 GRLRGGCYFAFMGVAWVLLAISAIANAVKGSLWWDIWSLGLLVLIPAVVYGKMRRS 74 >tr|A5U4A1|A5U4A1_MYCTA Tax_Id=419947 SubName: Full=Putative uncharacterized protein;[Mycobacterium tuberculosis] Length = 83 Score = 70.5 bits (171), Expect = 6e-11 Identities = 35/56 (62%), Positives = 41/56 (73%) Query: 33 GVLHARRYVAIMGVAWLLLAVSAIANAIRGSLWGTVGSLVLLVLIPTAVYSKLRNS 88 G L Y A MGVAW+LLA+SAIANA++GSLW + SL LLVLIP VY K+R S Sbjct: 19 GRLRGGCYFAFMGVAWVLLAISAIANAVKGSLWWDIWSLGLLVLIPAVVYGKMRRS 74 >tr|A1KKC1|A1KKC1_MYCBP Tax_Id=410289 SubName: Full=Putative uncharacterized protein BCG_2094c;[Mycobacterium bovis] Length = 83 Score = 70.5 bits (171), Expect = 6e-11 Identities = 35/56 (62%), Positives = 41/56 (73%) Query: 33 GVLHARRYVAIMGVAWLLLAVSAIANAIRGSLWGTVGSLVLLVLIPTAVYSKLRNS 88 G L Y A MGVAW+LLA+SAIANA++GSLW + SL LLVLIP VY K+R S Sbjct: 19 GRLRGGCYFAFMGVAWVLLAISAIANAVKGSLWWDIWSLGLLVLIPAVVYGKMRRS 74 >tr|Q8A2L5|Q8A2L5_BACTN Tax_Id=818 SubName: Full=Putative integral membrane protein;[Bacteroides thetaiotaomicron] Length = 288 Score = 35.8 bits (81), Expect = 1.6 Identities = 18/42 (42%), Positives = 26/42 (61%) Query: 40 YVAIMGVAWLLLAVSAIANAIRGSLWGTVGSLVLLVLIPTAV 81 YV + G +LL+ S+I++ W T G+L+LL LIPT V Sbjct: 185 YVFLFGGIFLLIGTSSISHLQPIREWHTAGNLILLALIPTVV 226 >tr|Q47P39|Q47P39_THEFY Tax_Id=269800 SubName: Full=Putative uncharacterized protein; Flags: Precursor;[Thermobifida fusca] Length = 80 Score = 35.4 bits (80), Expect = 2.1 Identities = 18/44 (40%), Positives = 26/44 (59%) Query: 38 RRYVAIMGVAWLLLAVSAIANAIRGSLWGTVGSLVLLVLIPTAV 81 +RYV +M V LL A++A A+ G+ WG V +V + P AV Sbjct: 13 QRYVVLMTVCLLLFALAAPVGALAGADWGIVMCVVAAAIPPVAV 56 >tr|Q4C1N8|Q4C1N8_CROWT Tax_Id=165597 SubName: Full=Similar to integral membrane protein;[Crocosphaera watsonii WH 8501] Length = 707 Score = 35.0 bits (79), Expect = 2.7 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%) Query: 38 RRYVAIMGVAWLLLAVSAIANAIRGSLWGTVGSLVLLVLIPT 79 RRY+ I ++W LAV+ I + GSL+ +G L L+V+I T Sbjct: 191 RRYLIISSISWFCLAVTHIITFVYGSLF--IGLLALVVIIQT 230 Database: Amellifera_nr Posted date: Feb 5, 2010 5:10 AM Number of letters in database: 3,846,993,858 Number of sequences in database: 11,275,203 Lambda K H 0.322 0.135 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 11275203 Number of Hits to DB: 502,273,388 Number of extensions: 13270227 Number of successful extensions: 42861 Number of sequences better than 10.0: 11 Number of HSP's gapped: 43204 Number of HSP's successfully gapped: 11 Length of query: 91 Length of database: 3,846,993,858 Length adjustment: 61 Effective length of query: 30 Effective length of database: 3,159,206,475 Effective search space: 94776194250 Effective search space used: 94776194250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 75 (33.5 bits)