Refseq_ID Mycobrowser_Version Feature Start Stop Score Strand Frame Locus Name Function Product Comments UniProt_AC Is_Pseudogene Functional_Category Orthologues M. leprae Orthologues M. marinum Orthologues M. tuberculosis Orthologues M. bovis Orthologues M. lepromatosis Orthologues M. tuberculosis Orthologues M. abscessus Orthologues M. haemophilum NC_008596.1 Mycobrowser_v3 CDS 141740 141850 . - 0 MSMEG_0119 MSMEG_0119 conserved hypothetical protein A0QNP7 No unknown NC_008596.1 Mycobrowser_v3 CDS 444662 444796 . + 0 MSMEG_0395 MSMEG_0395 hypothetical protein identified by Glimmer2; putative A0QPH0 No unknown NC_008596.1 Mycobrowser_v3 tRNA 6393822 6393912 . - 0 MSMEG_6326 MSMEG_6326 tRNA-Ser No stable RNAs NC_008596.1 Mycobrowser_v3 tRNA 4992841 4992927 . - 0 MSMEG_4897 MSMEG_4897 tRNA-Leu No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 4999233 5000252 . - 0 MSMEG_4908 MSMEG_4908 endo-type 6-aminohexanoate oligomer hydrolase identified by match to protein family HMM PF03576 A0R1X5 No unknown Rv1333 Rv1333 NC_008596.1 Mycobrowser_v3 CDS 5000259 5000837 . - 0 MSMEG_4909 MSMEG_4909 conserved hypothetical protein A0R1X6 No unknown Rv1332 Rv1332 NC_008596.1 Mycobrowser_v3 CDS 5000844 5001146 . - 0 MSMEG_4910 MSMEG_4910 ATP-dependent Clp protease adaptor protein ClpS identified by match to protein family HMM PF02617 A0R1X7 No unknown Rv1331 Rv1331 NC_008596.1 Mycobrowser_v3 CDS 5001213 5002517 . + 0 MSMEG_4911 pncB putative nicotinate phosphoribosyltransferase identified by match to protein family HMM PF04095; match to protein family HMM TIGR01513 A0R1X8 No unknown Rv1330c Rv1330c NC_008596.1 Mycobrowser_v3 CDS 5002521 5004572 . + 0 MSMEG_4912 MSMEG_4912 putative helicase A0R1X9 No unknown Rv1329c Rv1329c NC_008596.1 Mycobrowser_v3 CDS 5004664 5006106 . + 0 MSMEG_4913 MSMEG_4913 LpqM protein A0R1Y0 No unknown Rv0419 Rv0419 NC_008596.1 Mycobrowser_v3 CDS 5006124 5006972 . - 0 MSMEG_4914 MSMEG_4914 virginiamycin B hydrolase A0R1Y1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5006969 5009569 . - 0 MSMEG_4915 MSMEG_4915 alpha-glucan phosphorylase family protein identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094 A0R1Y2 No unknown Rv1328 Rv1328 NC_008596.1 Mycobrowser_v3 CDS 5009741 5011819 . + 0 MSMEG_4916 MSMEG_4916 alpha-amylase family protein identified by match to protein family HMM PF00128 Q9RP48 No unknown Rv1327c Rv1327c NC_008596.1 Mycobrowser_v3 CDS 5032225 5032590 . - 0 MSMEG_4935 atpC ATP synthase F1, epsilon subunit identified by match to protein family HMM PF02823; match to protein family HMM TIGR01216 A0R1Z9 No unknown Rv1311 Rv1311 NC_008596.1 Mycobrowser_v3 CDS 5385097 5385258 . + 0 MSMEG_5294 MSMEG_5294 hypothetical protein identified by Glimmer2; putative A0R302 No unknown NC_008596.1 Mycobrowser_v3 CDS 5011827 5014037 . + 0 MSMEG_4918 glgB 1,4-alpha-glucan branching enzyme identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR01515 A0R1Y4 No unknown Rv1326c Rv1326c NC_008596.1 Mycobrowser_v3 CDS 1163456 1163758 . - 0 MSMEG_1099 MSMEG_1099 hypothetical protein identified by Glimmer2; putative A0QRF6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2027614 2027757 . + 0 MSMEG_1949 MSMEG_1949 hypothetical protein identified by Glimmer2; putative A0QTS7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1890327 1890539 . + 0 MSMEG_1814 MSMEG_1814 hypothetical protein identified by Glimmer2; putative A0QTE8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5938421 5938591 . - 0 MSMEG_5875 MSMEG_5875 hypothetical protein identified by Glimmer2; putative A0R4L4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2751582 2751917 . - 0 MSMEG_2673 MSMEG_2673 similar at the nucleotide level to IS1137 in the IS Finder database. This gene is disrupted by an IS element.; IS1137, transposase orfB, interruption-C Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2753235 2753993 . - 0 MSMEG_2674 MSMEG_2674 similar at the nucleotide level to IS1137 in the IS Finder database. This gene is disrupted by an IS element.; IS1137, transposase orfB, interruption-N Yes unknown NC_008596.1 Mycobrowser_v3 tRNA 4797480 4797552 . + 0 MSMEG_4706 MSMEG_4706 tRNA-Arg No unknown NC_008596.1 Mycobrowser_v3 tRNA 4817832 4817907 . + 0 MSMEG_4725 MSMEG_4725 tRNA-His No unknown NC_008596.1 Mycobrowser_v3 CDS 5064154 5065035 . - 0 MSMEG_4967 MSMEG_4967 conserved hypothetical protein identified by match to protein family HMM PF00296 A0R230 No unknown NC_008596.1 Mycobrowser_v3 CDS 5065204 5066415 . + 0 MSMEG_4968 MSMEG_4968 two-component system sensor kinase identified by match to protein family HMM PF02518; match to protein family HMM PF07730 A0R231 No unknown NC_008596.1 Mycobrowser_v3 CDS 5066403 5067047 . + 0 MSMEG_4969 MSMEG_4969 two-component system response regulator identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545 A0R232 No unknown NC_008596.1 Mycobrowser_v3 CDS 5067065 5067952 . + 0 MSMEG_4970 MSMEG_4970 hypothetical protein identified by Glimmer2; putative A0R233 No unknown NC_008596.1 Mycobrowser_v3 CDS 5067953 5068975 . - 0 MSMEG_4971 MSMEG_4971 oxidoreductase identified by match to protein family HMM PF03060 A0R234 No unknown Rv2781c Rv2781c NC_008596.1 Mycobrowser_v3 CDS 5068972 5069505 . - 0 MSMEG_4972 MSMEG_4972 acetyltransferase identified by match to protein family HMM PF00583 A0R235 No unknown NC_008596.1 Mycobrowser_v3 CDS 5069552 5069935 . + 0 MSMEG_4973 MSMEG_4973 glyoxalase/bleomycin resistance protein/dioxygenase identified by match to protein family HMM PF00903 A0R236 No unknown NC_008596.1 Mycobrowser_v3 CDS 5069936 5070406 . - 0 MSMEG_4974 MSMEG_4974 rrf2 family protein (putative transcriptional regulator) identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738 A0R237 No unknown Rv1287 Rv1287 NC_008596.1 Mycobrowser_v3 CDS 5070449 5071123 . - 0 MSMEG_4975 MSMEG_4975 flavin-nucleotide-binding protein identified by match to protein family HMM PF01243 A0R238 No unknown NC_008596.1 Mycobrowser_v3 CDS 5071120 5071716 . - 0 MSMEG_4976 MSMEG_4976 isochorismatase hydrolase identified by match to protein family HMM PF00857 A0R239 No unknown NC_008596.1 Mycobrowser_v3 CDS 5071765 5072496 . - 0 MSMEG_4977 MSMEG_4977 3'(2'),5'-bisphosphate nucleotidase, putative identified by similarity to SP:P22255; match to protein family HMM PF00459 A0R240 No unknown NC_008596.1 Mycobrowser_v3 CDS 5072493 5074346 . - 0 MSMEG_4978 cysNC sulfate adenylytransferase, large subunit/adenylylsulfate kinase identified by match to protein family HMM PF00009; match to protein family HMM PF01583; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00455; match to protein family HMM TIGR02034 A0R241 No unknown Rv1286 Rv1286 NC_008596.1 Mycobrowser_v3 CDS 5074346 5075281 . - 0 MSMEG_4979 cysD sulfate adenylyltransferase, small subunit identified by similarity to SP:P21156; match to protein family HMM PF01507; match to protein family HMM TIGR02039 A0R242 No unknown Rv1285 Rv1285 NC_008596.1 Mycobrowser_v3 CDS 5177093 5177767 . + 0 MSMEG_5077 MSMEG_5077 probable conserved integral membrane protein A0R2D9 No unknown Rv1216c Rv1216c NC_008596.1 Mycobrowser_v3 CDS 2776595 2777801 . + 0 MSMEG_2704 MSMEG_2704 transposase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01548 Yes unknown NC_008596.1 Mycobrowser_v3 tRNA 1437965 1438037 . + 0 MSMEG_1343 MSMEG_1343 tRNA-Trp No stable RNAs NC_008596.1 Mycobrowser_v3 tRNA 1928428 1928522 . - 0 MSMEG_1851 MSMEG_1851 tRNA-Sec No stable RNAs NC_008596.1 Mycobrowser_v3 tRNA 2213142 2213214 . + 0 MSMEG_2138 MSMEG_2138 tRNA-Ala No stable RNAs NC_008596.1 Mycobrowser_v3 tRNA 2895271 2895346 . - 0 MSMEG_2835 MSMEG_2835 tRNA-Gly No stable RNAs NC_008596.1 Mycobrowser_v3 tRNA 2895813 2895887 . + 0 MSMEG_2836 MSMEG_2836 tRNA-Val No stable RNAs NC_008596.1 Mycobrowser_v3 tRNA 3800546 3800622 . - 0 MSMEG_3734 MSMEG_3734 tRNA-Pro No stable RNAs NC_008596.1 Mycobrowser_v3 rRNA 3820087 3823250 . - 0 MSMEG_3756 rrlA 23S ribosomal RNA No unknown NC_008596.1 Mycobrowser_v3 rRNA 3823615 3825142 . - 0 MSMEG_3757 rrsA 16S ribosomal RNA No unknown NC_008596.1 Mycobrowser_v3 tRNA 4278994 4279079 . + 0 MSMEG_4201 MSMEG_4201 tRNA-Leu No unknown NC_008596.1 Mycobrowser_v3 tRNA 4405775 4405846 . - 0 MSMEG_4319 MSMEG_4319 tRNA-Val No unknown NC_008596.1 Mycobrowser_v3 tRNA 4532821 4532894 . - 0 MSMEG_4452 MSMEG_4452 tRNA-Met No unknown NC_008596.1 Mycobrowser_v3 CDS 702737 704164 . + 0 MSMEG_0623 eccD3 secretion protein Snm4 identified by match to protein family HMM PF04600; match to protein family HMM TIGR02958 A0QQ46 No cell wall and cell processes Rv0290 Rv0290 NC_008596.1 Mycobrowser_v3 CDS 77918 79642 . + 0 MSMEG_0059 eccA1 ATPase, AAA family protein. ESX conserved component eccA1 identified by match to protein family HMM PF00004 A0QNI9 No cell wall and cell processes Rv3868 Rv3868 NC_008596.1 Mycobrowser_v3 CDS 691998 693767 . + 0 MSMEG_0615 eccA3 ATPase, AAA family protein. ESX conserved component eccA3 identified by match to protein family HMM PF00004 A0QQ38 No cell wall and cell processes Rv0282 Rv0282 NC_008596.1 Mycobrowser_v3 CDS 79650 81089 . + 0 MSMEG_0060 eccB1 ESX conserved component eccB1. Possible membrane protein identified by match to protein family HMM PF05108 A0QNJ0 No cell wall and cell processes Rv3869 Rv3869 NC_008596.1 Mycobrowser_v3 CDS 693764 695320 . + 0 MSMEG_0616 eccB3 ESX conserved component eccB3. Possible membrane protein identified by match to protein family HMM PF05108 A0QQ39 No cell wall and cell processes Rv0283 Rv0283 NC_008596.1 Mycobrowser_v3 CDS 83318 85099 . + 0 MSMEG_0062 eccC1b FtsK/SpoIIIE family protein. ESX conserved component eccCb1 identified by match to protein family HMM PF01580 A0QNJ2 No cell wall and cell processes NC_008596.1 Mycobrowser_v3 CDS 81089 83317 . + 0 MSMEG_0061 eccC1a FtsK/SpoIIIE family protein. ESX conserved component eccCa1. Possible transmembrane protein identified by match to protein family HMM PF01580 A0QNJ1 No cell wall and cell processes Rv3870 Rv3870 NC_008596.1 Mycobrowser_v3 CDS 2798872 2799497 . + 0 MSMEG_2730 MSMEG_2730 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 1890966 1891139 . - 0 MSMEG_1815 MSMEG_1815 hypothetical protein identified by Glimmer2; putative A0QTE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2815547 2816577 . - 0 MSMEG_2745 MSMEG_2745 hydrolase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00561 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2817813 2818666 . + 0 MSMEG_2747 MSMEG_2747 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2081235 2081378 . - 0 MSMEG_1999 MSMEG_1999 hypothetical protein identified by Glimmer2; putative A0QTX5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6957005 6958345 . - 0 MSMEG_6914 ggh glucosylglycerate hydrolase Absent from most slow-growing mycobacteria, but present in most fast-growing mycobacteria (see Alarico et al. 2014). A0R7H3 No intermediary metabolism and respiration NC_008596.1 Mycobrowser_v3 CDS 3387127 3387962 . - 0 MSMEG_3307 MSMEG_3307 methyltransferase FkbM; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4142705 4142878 . - 0 MSMEG_4069 MSMEG_4069 hypothetical protein identified by Glimmer2; putative A0QZL6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2876708 2877562 . + 0 MSMEG_2814 MSMEG_2814 two component system response regulator; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00072 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2877531 2878581 . + 0 MSMEG_2815 MSMEG_2815 tape-measure protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4862347 4862508 . + 0 MSMEG_4759 MSMEG_4759 hypothetical protein identified by Glimmer2; putative A0R1H9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2879010 2880211 . + 0 MSMEG_2816 MSMEG_2816 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2884682 2884843 . + 0 MSMEG_2822 MSMEG_2822 transposase, truncation Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2884840 2885700 . - 0 MSMEG_2821 MSMEG_2821 This gene is disrupted by an IS1549 element.; IS1549, transposase, interruption-C; identified by similarity to GB:AAC38260.1 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2887291 2888505 . - 0 MSMEG_2823 MSMEG_2823 This gene is disrupted by an IS1549 element.; IS1549, transposase, interruption-N; identified by similarity to GP:2935133; match to protein family HMM PF01609 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2888641 2888826 . + 0 MSMEG_2825 MSMEG_2825 IS6120, transposase, truncation; identified by similarity to SP:P35883 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2965843 2967049 . + 0 MSMEG_2903 MSMEG_2903 transposase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3052841 3053973 . - 0 MSMEG_2987 MSMEG_2987 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3095627 3096315 . - 0 MSMEG_3023 MSMEG_3023 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3775 4359 . + 0 MSMEG_0004 MSMEG_0004 hypothetical protein RecF-gyrB intergenic region protein; identified by match to protein family HMM PF05258 A0QND9 No unknown Rv0004 Rv0004 NC_008596.1 Mycobrowser_v3 CDS 144542 145048 . + 0 MSMEG_0123 MSMEG_0123 hypothetical protein identified by Glimmer2; putative A0QNQ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3108872 3111491 . + 0 MSMEG_3037 MSMEG_3037 regulatory protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00196 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 68264 68767 . + 0 MSMEG_0048 MSMEG_0048 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0QNH8 No unknown Rv2991 Rv2991 NC_008596.1 Mycobrowser_v3 CDS 499 1692 . + 0 MSMEG_0001 dnaN DNA polymerase III, beta subunit identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663 A0QND6 No unknown Rv0002 Rv0002 NC_008596.1 Mycobrowser_v3 CDS 1721 2614 . + 0 MSMEG_0002 MSMEG_0002 6-phosphogluconate dehydrogenase, decarboxylating identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00872 A0QND7 No unknown Rv1122 Rv1122 NC_008596.1 Mycobrowser_v3 CDS 2624 3778 . + 0 MSMEG_0003 MSMEG_0003 DNA replication and repair protein RecF identified by match to protein family HMM PF02463; match to protein family HMM TIGR00611 A0QND8 No unknown Rv0003 Rv0003 NC_008596.1 Mycobrowser_v3 CDS 276501 276869 . - 0 MSMEG_0245 MSMEG_0245 probable conserved transmembrane protein A0QP23 No unknown Rv0401 Rv0401 NC_008596.1 Mycobrowser_v3 CDS 5271099 5271269 . - 0 MSMEG_5169 MSMEG_5169 conserved hypothetical protein A0R2M7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6267234 6267377 . - 0 MSMEG_6200 MSMEG_6200 hypothetical protein identified by Glimmer2; putative A0R5I2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1871520 1871675 . + 0 MSMEG_1789 MSMEG_1789 conserved hypothetical protein A0QTC3 No unknown NC_008596.1 Mycobrowser_v3 tRNA 2467984 2468058 . + 0 MSMEG_2384 MSMEG_2384 tRNA-Gln No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 3042909 3043118 . + 0 MSMEG_2977 MSMEG_2977 hypothetical protein identified by Glimmer2; putative A0QWK8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4089336 4089491 . + 0 MSMEG_4016 MSMEG_4016 conserved hypothetical protein A0QZG3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4089371 4089532 . - 0 MSMEG_4015 MSMEG_4015 hypothetical protein identified by Glimmer2; putative A0QZG4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3168630 3168773 . + 0 MSMEG_3096 MSMEG_3096 hypothetical protein identified by Glimmer2; putative A0QWX2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2177447 2178255 . - 0 MSMEG_2101 MSMEG_2101 taurine ABC transporter permease; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00528 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3626894 3627010 . - 0 MSMEG_3565 MSMEG_3565 hypothetical protein identified by Glimmer2; putative A0QY80 No unknown NC_008596.1 Mycobrowser_v3 tRNA 3883645 3883718 . - 0 MSMEG_3814 MSMEG_3814 tRNA-Cys No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 4239604 4239756 . - 0 MSMEG_4160 MSMEG_4160 hypothetical protein identified by Glimmer2; putative A0QZV2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4495727 4496029 . - 0 MSMEG_4406 MSMEG_4406 UsfY protein A0R0J3 No unknown NC_008596.1 Mycobrowser_v3 tRNA 4847908 4847983 . + 0 MSMEG_4746 MSMEG_4746 tRNA-Lys No stable RNAs NC_008596.1 Mycobrowser_v3 rRNA 5027948 5029475 . - 0 MSMEG_4931 rrsB 16S ribosomal RNA No unknown NC_008596.1 Mycobrowser_v3 tRNA 5058252 5058327 . + 0 MSMEG_4960 MSMEG_4960 tRNA-Arg No unknown NC_008596.1 Mycobrowser_v3 tRNA 5834209 5834285 . - 0 MSMEG_5756 MSMEG_5756 tRNA-Asp No unknown NC_008596.1 Mycobrowser_v3 tRNA 5834322 5834394 . - 0 MSMEG_5757 MSMEG_5757 tRNA-Glu No unknown NC_008596.1 Mycobrowser_v3 CDS 5236721 5236834 . + 0 MSMEG_5133 MSMEG_5133 hypothetical protein identified by Glimmer2; putative A0R2J1 No unknown NC_008596.1 Mycobrowser_v3 tRNA 6272367 6272440 . + 0 MSMEG_6204 MSMEG_6204 tRNA-Pro No unknown NC_008596.1 Mycobrowser_v3 tRNA 6417690 6417776 . - 0 MSMEG_6360 MSMEG_6360 tRNA-Ser No unknown NC_008596.1 Mycobrowser_v3 CDS 5310644 5310811 . - 0 MSMEG_5212 MSMEG_5212 conserved hypothetical protein A0R2S0 No unknown NC_008596.1 Mycobrowser_v3 sRNA 2169257 2169625 . + 0 MSMEG_2093 MSMEG_2093 sRNA No unknown NC_008596.1 Mycobrowser_v3 tRNA 5685927 5685999 . + 0 MSMEG_5598 MSMEG_5598 tRNA-Arg No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 1226978 1227760 . + 0 MSMEG_1164 MSMEG_1164 transporter; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6334613 6334762 . - 0 MSMEG_6270 MSMEG_6270 hypothetical protein identified by Glimmer2; putative A0R5Q1 No unknown NC_008596.1 Mycobrowser_v3 tRNA 6352992 6353077 . + 0 MSMEG_6287 MSMEG_6287 tRNA-Ser No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 6431538 6431645 . - 0 MSMEG_6377 MSMEG_6377 hypothetical protein identified by Glimmer2; putative A0R602 No unknown NC_008596.1 Mycobrowser_v3 CDS 6601673 6601822 . - 0 MSMEG_6544 MSMEG_6544 transport-associated, putative A0R6G8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6632857 6632961 . + 0 MSMEG_6578 MSMEG_6578 hypothetical protein identified by Glimmer2; putative A0R6K2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6690946 6691068 . - 0 MSMEG_6640 MSMEG_6640 hypothetical protein identified by Glimmer2; putative A0R6R1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6669518 6672355 . + 0 MSMEG_6618 MSMEG_6618 DEAD/DEAH box helicase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6672830 6674105 . - 0 MSMEG_6619 MSMEG_6619 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6705093 6708340 . - 0 MSMEG_6653 MSMEG_6653 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6845594 6846700 . + 0 MSMEG_6799 MSMEG_6799 aldo/keto reductase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00248 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6861916 6862958 . - 0 MSMEG_6812 MSMEG_6812 major facilitator superfamily; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00083 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6869784 6870715 . + 0 MSMEG_6819 MSMEG_6819 conserved domain protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6916180 6917819 . + 0 MSMEG_6868 MSMEG_6868 oligopeptide ABC transporter ATP-binding protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00005 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6921842 6922551 . - 0 MSMEG_6873 MSMEG_6873 enoyl-CoA hydratase/isomerase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6930866 6931293 . + 0 MSMEG_6883 MSMEG_6883 hypothetical protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error; identified by Glimmer2 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6937486 6937740 . + 0 MSMEG_6891 MSMEG_6891 ribonuclease H; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 785252 785593 . - 0 MSMEG_0696 MSMEG_0696 alanine-rich protein A0QQB5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2305009 2305179 . - 0 MSMEG_2226 MSMEG_2226 hypothetical protein identified by Glimmer2; putative A0QUJ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2027434 2027625 . - 0 MSMEG_1948 MSMEG_1948 hypothetical protein identified by Glimmer2; putative A0QTS6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2190275 2190532 . - 0 MSMEG_2113 MSMEG_2113 hypothetical protein identified by Glimmer2; putative A0QU84 No unknown NC_008596.1 Mycobrowser_v3 CDS 2190361 2190525 . - 0 MSMEG_2114 MSMEG_2114 glucose-6-phosphate isomerase, putative A0QU85 No unknown NC_008596.1 Mycobrowser_v3 CDS 3407520 3407699 . - 0 MSMEG_3329 MSMEG_3329 hypothetical protein identified by Glimmer2; putative A0QXJ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2425365 2426033 . - 0 MSMEG_2345 MSMEG_2345 lycopene cyclase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3755127 3755931 . + 0 MSMEG_3690 MSMEG_3690 transcriptional regulatory protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF08220 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3454069 3454998 . - 0 MSMEG_3384 MSMEG_3384 isoflavone reductase identified by match to protein family HMM PF05368 A0QXQ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3454995 3455480 . - 0 MSMEG_3385 MSMEG_3385 hypothetical protein identified by Glimmer2; putative A0QXQ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5212766 5213179 . + 0 MSMEG_5115 MSMEG_5115 hypothetical protein identified by Glimmer2; putative A0R2H3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3545574 3546068 . - 0 MSMEG_3479 MSMEG_3479 thiol peroxidase identified by match to protein family HMM PF00578 A0QXZ5 No unknown Rv1932 Rv1932 NC_008596.1 Mycobrowser_v3 CDS 3455477 3456817 . - 0 MSMEG_3386 MSMEG_3386 shikimate transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QXQ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3456825 3458378 . - 0 MSMEG_3387 MSMEG_3387 aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 A0QXQ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3458388 3459635 . - 0 MSMEG_3388 MSMEG_3388 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QXQ6 No unknown Rv3086 Rv3086 NC_008596.1 Mycobrowser_v3 CDS 3459807 3461426 . + 0 MSMEG_3389 MSMEG_3389 putative acetolactate synthase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 A0QXQ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3461441 3462214 . + 0 MSMEG_3390 MSMEG_3390 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QXQ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3462268 3463464 . + 0 MSMEG_3391 MSMEG_3391 L-carnitine dehydratase/bile acid-inducible protein F identified by match to protein family HMM PF02515 A0QXQ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3463461 3464594 . + 0 MSMEG_3392 MSMEG_3392 acyl-CoA dehydrogenase domain protein identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0QXR0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3464591 3465574 . + 0 MSMEG_3393 MSMEG_3393 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441 A0QXR1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3465586 3466005 . + 0 MSMEG_3394 MSMEG_3394 cupin domain protein identified by match to protein family HMM PF07883 A0QXR2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5088696 5088929 . - 0 MSMEG_4991 MSMEG_4991 hypothetical protein identified by Glimmer2; putative A0R255 No unknown NC_008596.1 Mycobrowser_v3 CDS 3521023 3521151 . - 0 MSMEG_3453 MSMEG_3453 hypothetical protein identified by Glimmer2; putative A0QXX0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3521165 3521548 . + 0 MSMEG_3455 hslR heat shock protein 15 identified by match to protein family HMM PF01479 A0QXX1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3521554 3521997 . - 0 MSMEG_3456 MSMEG_3456 hydroxylaminobenzene mutase A0QXX2 No unknown Rv3078 Rv3078 NC_008596.1 Mycobrowser_v3 CDS 3522131 3523492 . - 0 MSMEG_3457 MSMEG_3457 DoxD family protein/pyridine nucleotide-disulfide oxidoreductase identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992 A0QXX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3523559 3524395 . - 0 MSMEG_3458 MSMEG_3458 conserved hypothetical protein A0QXX4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3542549 3543670 . - 0 MSMEG_3476 MSMEG_3476 peptidase, M48 family protein identified by match to protein family HMM PF01435 A0QXZ2 No unknown Rv1977 Rv1977 NC_008596.1 Mycobrowser_v3 CDS 3524499 3526022 . - 0 MSMEG_3459 MSMEG_3459 conserved hypothetical protein identified by match to protein family HMM PF06738 A0QXX5 No unknown Rv3737 Rv3737 NC_008596.1 Mycobrowser_v3 CDS 3526436 3526876 . + 0 MSMEG_3460 MSMEG_3460 ferric uptake regulation protein identified by match to protein family HMM PF01475 A0QXX6 No unknown Rv1909c Rv1909c NC_008596.1 Mycobrowser_v3 CDS 3529328 3529993 . + 0 MSMEG_3462 MSMEG_3462 oxidoreductase identified by match to protein family HMM PF00881 A0QXX8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3531027 3532043 . - 0 MSMEG_3464 MSMEG_3464 alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QXY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3532122 3533981 . - 0 MSMEG_3465 MSMEG_3465 acyl-CoA synthase identified by match to protein family HMM PF00501 A0QXY1 No unknown Rv1925 Rv1925 NC_008596.1 Mycobrowser_v3 CDS 3534056 3534223 . - 0 MSMEG_3466 MSMEG_3466 hypothetical protein identified by Glimmer2; putative A0QXY2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3534240 3535796 . + 0 MSMEG_3468 MSMEG_3468 AMP-binding enzyme identified by match to protein family HMM PF00501 A0QXY3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3535783 3536193 . - 0 MSMEG_3467 MSMEG_3467 conserved hypothetical protein A0QXY4 No unknown Rv1976c Rv1976c NC_008596.1 Mycobrowser_v3 CDS 3536190 3536777 . - 0 MSMEG_3469 MSMEG_3469 TetR family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QXY5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3627559 3627768 . + 0 MSMEG_3568 MSMEG_3568 conserved hypothetical protein identified by match to protein family HMM PF04324 A0QY82 No unknown NC_008596.1 Mycobrowser_v3 CDS 3565749 3565904 . + 0 MSMEG_3502 MSMEG_3502 hypothetical protein identified by Glimmer2; putative A0QY18 No unknown NC_008596.1 Mycobrowser_v3 CDS 3566211 3566756 . + 0 MSMEG_3503 MSMEG_3503 conserved hypothetical protein A0QY19 No unknown NC_008596.1 Mycobrowser_v3 CDS 3566848 3567099 . + 0 MSMEG_3504 MSMEG_3504 probable membrane protein A0QY20 No unknown NC_008596.1 Mycobrowser_v3 CDS 3567077 3568549 . + 0 MSMEG_3505 MSMEG_3505 6-aminohexanoate-cyclic-dimer hydrolase identified by match to protein family HMM PF01425 A0QY21 No unknown NC_008596.1 Mycobrowser_v3 CDS 3568572 3569969 . + 0 MSMEG_3506 MSMEG_3506 putative amino acid decarboxylase, Pyridoxal-dependent protein identified by match to protein family HMM PF00282; match to protein family HMM PF01212 A0QY22 No unknown NC_008596.1 Mycobrowser_v3 CDS 3570092 3570985 . + 0 MSMEG_3507 MSMEG_3507 fructose-bisphosphate aldolase class-I identified by match to protein family HMM PF00274 A0QY23 No unknown NC_008596.1 Mycobrowser_v3 CDS 3571016 3571939 . + 0 MSMEG_3508 MSMEG_3508 hydrolase, alpha/beta hydrolase fold family protein identified by match to protein family HMM PF00561 A0QY24 No unknown Rv1191 Rv1191 NC_008596.1 Mycobrowser_v3 CDS 3572011 3572664 . + 0 MSMEG_3509 MSMEG_3509 conserved hypothetical protein A0QY25 No unknown NC_008596.1 Mycobrowser_v3 CDS 3572774 3574159 . + 0 MSMEG_3511 MSMEG_3511 hydroxylase identified by match to protein family HMM PF01494 A0QY26 No unknown NC_008596.1 Mycobrowser_v3 CDS 3736700 3737035 . + 0 MSMEG_3670 MSMEG_3670 transporter, small multidrug resistance (SMR) family protein identified by similarity to SP:Q57225; match to protein family HMM PF00893 A0QYI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3575284 3576576 . - 0 MSMEG_3512 MSMEG_3512 competence damage-inducible protein A identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200 A0QY28 No unknown Rv1901 Rv1901 NC_008596.1 Mycobrowser_v3 CDS 3576626 3577834 . - 0 MSMEG_3513 MSMEG_3513 enhanced intracellular survival protein A0QY29 No unknown Rv2416c Rv2416c NC_008596.1 Mycobrowser_v3 CDS 3577888 3578115 . - 0 MSMEG_3514 MSMEG_3514 hypothetical protein identified by Glimmer2; putative A0QY30 No unknown NC_008596.1 Mycobrowser_v3 CDS 3578173 3578910 . - 0 MSMEG_3515 MSMEG_3515 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase identified by match to protein family HMM PF00106 A0QY31 No unknown NC_008596.1 Mycobrowser_v3 CDS 3580099 3580770 . - 0 MSMEG_3517 MSMEG_3517 HAD-superfamily protein subfamily protein IB hydrolase identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490 A0QY32 No unknown NC_008596.1 Mycobrowser_v3 CDS 3655206 3655454 . + 0 MSMEG_3591 MSMEG_3591 conserved hypothetical protein A0QYA6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3655466 3656092 . + 0 MSMEG_3592 MSMEG_3592 hypothetical protein identified by Glimmer2; putative A0QYA7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3656099 3656827 . + 0 MSMEG_3593 MSMEG_3593 conserved hypothetical protein identified by match to protein family HMM PF01904 A0QYA8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3656839 3658068 . + 0 MSMEG_3594 MSMEG_3594 anthranilate dioxygenase reductase identified by match to protein family HMM PF00070; match to protein family HMM PF07992 A0QYA9 No unknown Rv1869c Rv1869c NC_008596.1 Mycobrowser_v3 CDS 3658215 3658883 . + 0 MSMEG_3595 MSMEG_3595 conserved hypothetical protein A0QYB0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3658883 3662089 . + 0 MSMEG_3596 MSMEG_3596 ATPase A0QYB1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3661633 3662124 . + 0 MSMEG_3597 MSMEG_3597 hypothetical protein identified by Glimmer2; putative A0QYB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2221153 2222246 . + 0 MSMEG_2147 MSMEG_2147 gp16 protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3664319 3665353 . - 0 MSMEG_3601 MSMEG_3601 ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components identified by match to protein family HMM PF02653 A0QYB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3665350 3666888 . - 0 MSMEG_3602 MSMEG_3602 ribose transport ATP-binding protein RbsA identified by match to protein family HMM PF00005 A0QYB7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3666885 3667931 . - 0 MSMEG_3603 MSMEG_3603 oxidoreductase, zinc-binding dehydrogenase family protein identified by match to protein family HMM PF00107 A0QYB8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3667925 3668692 . - 0 MSMEG_3604 MSMEG_3604 sorbitol utilization protein SOU2 identified by match to protein family HMM PF00106 A0QYB9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3668719 3669759 . - 0 MSMEG_3605 MSMEG_3605 sorbitol dehydrogenase identified by match to protein family HMM PF00107 A0QYC0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3669958 3670938 . + 0 MSMEG_3606 MSMEG_3606 transcriptional regulator identified by match to protein family HMM PF04198 A0QYC1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5212808 5213160 . - 0 MSMEG_5113 MSMEG_5113 conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6066386 6067141 . + 0 MSMEG_6001 MSMEG_6001 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R4Y9 No unknown Rv3550 Rv3550 NC_008596.1 Mycobrowser_v3 CDS 6067138 6068025 . + 0 MSMEG_6002 MSMEG_6002 coenzyme A transferase, subunit A identified by match to protein family HMM PF01144 A0R4Z0 No unknown Rv3551 Rv3551 NC_008596.1 Mycobrowser_v3 CDS 6068022 6068771 . + 0 MSMEG_6003 MSMEG_6003 coenzyme A transferase, subunit B A0R4Z1 No unknown Rv3552 Rv3552 NC_008596.1 Mycobrowser_v3 CDS 6068768 6069844 . + 0 MSMEG_6004 MSMEG_6004 oxidoreductase, 2-nitropropane dioxygenase family protein identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060 A0R4Z2 No unknown Rv3553 Rv3553 NC_008596.1 Mycobrowser_v3 CDS 6069888 6070526 . + 0 MSMEG_6005 MSMEG_6005 conserved hypothetical protein A0R4Z3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1168665 1169811 . + 0 MSMEG_1105 MSMEG_1105 phthiodiolone ketoreductase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6070523 6071269 . + 0 MSMEG_6006 MSMEG_6006 conserved hypothetical protein A0R4Z4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6102080 6102649 . - 0 MSMEG_6035 MSMEG_6035 nitrilotriacetate monooxygenase component B identified by match to protein family HMM PF01613 A0R521 No unknown Rv3567c Rv3567c NC_008596.1 Mycobrowser_v3 CDS 6072343 6073491 . - 0 MSMEG_6008 MSMEG_6008 acetyl-CoA acetyltransferase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0R4Z5 No unknown Rv3556c Rv3556c NC_008596.1 Mycobrowser_v3 CDS 6073484 6074101 . - 0 MSMEG_6009 MSMEG_6009 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R4Z6 No unknown Rv3557c Rv3557c NC_008596.1 Mycobrowser_v3 CDS 6074416 6074934 . + 0 MSMEG_6010 MSMEG_6010 hypothetical protein identified by Glimmer2; putative A0R4Z7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6075060 6075848 . - 0 MSMEG_6011 MSMEG_6011 short chain dehydrogenase identified by match to protein family HMM PF00106 A0R4Z8 No unknown Rv3559c Rv3559c NC_008596.1 Mycobrowser_v3 CDS 6075845 6077023 . - 0 MSMEG_6012 MSMEG_6012 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0R4Z9 No unknown Rv3560c Rv3560c NC_008596.1 Mycobrowser_v3 CDS 6078624 6079766 . + 0 MSMEG_6014 MSMEG_6014 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771 A0R500 No unknown Rv3562 Rv3562 NC_008596.1 Mycobrowser_v3 CDS 6079763 6080719 . + 0 MSMEG_6015 MSMEG_6015 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0R501 No unknown Rv3563 Rv3563 NC_008596.1 Mycobrowser_v3 CDS 6122623 6122877 . - 0 MSMEG_6055 MSMEG_6055 hypothetical protein identified by Glimmer2; putative A0R540 No unknown NC_008596.1 Mycobrowser_v3 CDS 1509463 1510909 . + 0 MSMEG_1408 MSMEG_1408 arginine/ornithine antiporter; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6407249 6407746 . - 0 MSMEG_6343 MSMEG_6343 conserved hypothetical protein identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040 A0R5X3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6407908 6408258 . + 0 MSMEG_6345 MSMEG_6345 conserved hypothetical protein A0R5X4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6408351 6408779 . + 0 MSMEG_6346 MSMEG_6346 hypothetical protein identified by Glimmer2; putative A0R5X5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6410654 6411739 . + 0 MSMEG_6351 hisC histidinol-phosphate aminotransferase identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141 A0R5X8 No unknown Rv3772 Rv3772 NC_008596.1 Mycobrowser_v3 CDS 6411736 6412209 . + 0 MSMEG_6352 MSMEG_6352 conserved hypothetical protein A0R5X9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6412212 6413027 . + 0 MSMEG_6353 MSMEG_6353 delta3,5-delta2,4-dienoyl-CoA isomerase identified by match to protein family HMM PF00378 A0R5Y0 No unknown Rv3774 Rv3774 NC_008596.1 Mycobrowser_v3 CDS 6413230 6413949 . + 0 MSMEG_6354 MSMEG_6354 serine esterase, cutinase family protein identified by match to protein family HMM PF01083 A0R5Y1 No unknown Rv1758 Rv1758 NC_008596.1 Mycobrowser_v3 CDS 6414246 6414500 . + 0 MSMEG_6355 MSMEG_6355 hypothetical protein identified by Glimmer2; putative A0R5Y2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6414574 6415206 . - 0 MSMEG_6356 MSMEG_6356 probable transcriptional regulator, AraC family protein, putative identified by match to protein family HMM PF00165 A0R5Y3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6415525 6415662 . - 0 MSMEG_6357 MSMEG_6357 hypothetical protein identified by Glimmer2; putative A0R5Y4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6415683 6416591 . + 0 MSMEG_6358 MSMEG_6358 mesocentin A0R5Y5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6416588 6417490 . + 0 MSMEG_6359 MSMEG_6359 trypsin domain protein identified by match to protein family HMM PF00089 A0R5Y6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6417795 6418307 . - 0 MSMEG_6361 MSMEG_6361 transcriptional regulator, MarR family protein identified by match to protein family HMM PF01047 A0R5Y7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6418375 6419352 . + 0 MSMEG_6362 MSMEG_6362 quinone oxidoreductase identified by match to protein family HMM PF00107; match to protein family HMM TIGR02824 A0R5Y8 No unknown Rv3777 Rv3777 NC_008596.1 Mycobrowser_v3 CDS 6419371 6420567 . - 0 MSMEG_6363 MSMEG_6363 cysteine desulfurase family protein identified by match to protein family HMM PF00266; match to protein family HMM TIGR01976 A0R5Y9 No unknown Rv3778c Rv3778c NC_008596.1 Mycobrowser_v3 CDS 6421207 6421734 . + 0 MSMEG_6365 MSMEG_6365 conserved hypothetical protein A0R5Z0 No unknown Rv3780 Rv3780 NC_008596.1 Mycobrowser_v3 CDS 6490338 6491120 . + 0 MSMEG_6420 MSMEG_6420 abortive infection protein identified by match to protein family HMM PF02517 A0R645 No unknown NC_008596.1 Mycobrowser_v3 CDS 458188 465867 . + 0 MSMEG_0402 MSMEG_0402 linear gramicidin synthetase subunit D identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746 Q3L891 No unknown NC_008596.1 Mycobrowser_v3 CDS 471613 482571 . - 0 MSMEG_0408 MSMEG_0408 type I modular polyketide synthase identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801 Q3L885 No unknown NC_008596.1 Mycobrowser_v3 CDS 2197776 2200202 . - 0 MSMEG_2121 MSMEG_2121 multiphosphoryl transfer protein (MTP) identified by match to protein family HMM PF00381; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF03610; match to protein family HMM PF05524; match to protein family HMM TIGR01003; match to protein family HMM TIGR01417; match to protein family HMM TIGR02364 A0QU91 No unknown NC_008596.1 Mycobrowser_v3 CDS 3311941 3313483 . - 0 MSMEG_3230 MSMEG_3230 ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00005; match to protein family HMM TIGR02868 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 1917272 1918728 . + 0 MSMEG_1843 ahcY adenosylhomocysteinase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00670; match to protein family HMM PF02254; match to protein family HMM PF02826; match to protein family HMM PF05221; match to protein family HMM TIGR00936 A4ZHR8 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 1419591 1419878 . + 0 MSMEG_1323 MSMEG_1323 hypothetical protein identified by Glimmer2; putative A0QS25 No unknown NC_008596.1 Mycobrowser_v3 CDS 978024 978347 . - 0 MSMEG_0893 MSMEG_0893 hypothetical protein identified by Glimmer2; putative A0QQV8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1351351 1351716 . + 0 MSMEG_1262 MSMEG_1262 conserved hypothetical protein A0QRW5 No unknown NC_008596.1 Mycobrowser_v3 CDS 990912 991181 . + 0 MSMEG_0904 MSMEG_0904 probable conserved membrane protein A0QQW9 No unknown Rv0463 Rv0463 NC_008596.1 Mycobrowser_v3 CDS 1185840 1186217 . + 0 MSMEG_1121 MSMEG_1121 conserved hypothetical protein A0QRH7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1186298 1186426 . - 0 MSMEG_1122 MSMEG_1122 hypothetical protein identified by Glimmer2; putative A0QRH8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3407751 3407924 . - 0 MSMEG_3330 MSMEG_3330 conserved domain protein identified by match to protein family HMM PF05532 A0QXK0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5544268 5544540 . - 0 MSMEG_5461 MSMEG_5461 hypothetical protein identified by Glimmer2; putative A0R3G2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3580892 3581272 . + 0 MSMEG_3518 MSMEG_3518 conserved hypothetical protein A0QY33 No unknown NC_008596.1 Mycobrowser_v3 CDS 5089057 5089329 . - 0 MSMEG_4993 MSMEG_4993 hypothetical protein identified by Glimmer2; putative A0R256 No unknown NC_008596.1 Mycobrowser_v3 CDS 5089394 5089675 . + 0 MSMEG_4994 MSMEG_4994 flagella membrane glycoprotein 1B, putative A0R257 No unknown NC_008596.1 Mycobrowser_v3 CDS 504016 504384 . + 0 MSMEG_0428 MSMEG_0428 nitrite reductase [NAD(P)H] small subunit A0QPK3 No unknown Rv0253 Rv0253 NC_008596.1 Mycobrowser_v3 CDS 2519128 2519562 . + 0 MSMEG_2434 MSMEG_2434 conserved hypothetical protein A0QV36 No unknown Rv2910c Rv2910c NC_008596.1 Mycobrowser_v3 CDS 1495614 1495991 . - 0 MSMEG_1394 MSMEG_1394 probable conserved transmembrane protein A0QS92 No unknown Rv0680c Rv0680c NC_008596.1 Mycobrowser_v3 CDS 1542066 1542299 . + 0 MSMEG_1444 rpmC ribosomal protein L29 identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012 A0QSD9 No unknown Rv0709 Rv0709 NC_008596.1 Mycobrowser_v3 CDS 2215760 2216200 . - 0 MSMEG_2143 MSMEG_2143 hypothetical protein identified by Glimmer2; putative A0QUB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2233443 2233865 . - 0 MSMEG_2158 MSMEG_2158 hypothetical protein identified by Glimmer2; putative A0QUC6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2233641 2233796 . + 0 MSMEG_2160 MSMEG_2160 hypothetical protein identified by Glimmer2; putative A0QUC7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2253121 2253447 . + 0 MSMEG_2176 MSMEG_2176 conserved hypothetical protein A0QUE1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2823372 2823800 . - 0 MSMEG_2753 MSMEG_2753 conserved hypothetical protein A0QVZ6 No unknown Rv2709 Rv2709 NC_008596.1 Mycobrowser_v3 CDS 3715210 3715542 . - 0 MSMEG_3650 MSMEG_3650 integral membrane protein identified by match to protein family HMM PF06947 A0QYG5 No unknown Rv1824 Rv1824 NC_008596.1 Mycobrowser_v3 CDS 3794524 3794658 . + 0 MSMEG_3728 MSMEG_3728 hypothetical protein identified by Glimmer2; putative A0QYP0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2447932 2448964 . + 0 MSMEG_2366 MSMEG_2366 6-phosphofructokinase 1; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00365; match to protein family HMM TIGR02483 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5285867 5286256 . - 0 MSMEG_5186 MSMEG_5186 HicB family protein identified by match to protein family HMM PF05534 A0R2P4 No unknown NC_008596.1 Mycobrowser_v3 tRNA 6410476 6410567 . - 0 MSMEG_6350 MSMEG_6350 tRNA-Ser No unknown NC_008596.1 Mycobrowser_v3 CDS 810514 811017 . - 0 MSMEG_0722 MSMEG_0722 conserved hypothetical protein A0QQE0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5354473 5354901 . + 0 MSMEG_5262 MSMEG_5262 conserved hypothetical protein A0R2X0 No unknown Rv1081c Rv1081c NC_008596.1 Mycobrowser_v3 CDS 811187 811729 . - 0 MSMEG_0723 MSMEG_0723 conserved hypothetical protein A0QQE1 No unknown NC_008596.1 Mycobrowser_v3 CDS 811835 812161 . + 0 MSMEG_0724 MSMEG_0724 IS1137, transposase orfA similar at the nucleotide level to IS1137 in the IS Finder database.; identified by match to protein family HMM PF01527 A0QQE2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1163698 1164150 . - 0 MSMEG_1100 MSMEG_1100 dgpf protein identified by match to protein family HMM PF04946 A0QRF7 No unknown NC_008596.1 Mycobrowser_v3 CDS 128084 128734 . + 0 MSMEG_0105 MSMEG_0105 DNA-binding response regulator, LuxR family protein identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0QNN3 No unknown Rv0844c Rv0844c NC_008596.1 Mycobrowser_v3 CDS 2002578 2002958 . + 0 MSMEG_1923 MSMEG_1923 membrane protein A0QTQ1 No unknown Rv3217c Rv3217c NC_008596.1 Mycobrowser_v3 CDS 618988 619611 . + 0 MSMEG_0540 MSMEG_0540 transcriptional regulator, putative identified by match to protein family HMM PF04299 A0QPW3 No unknown NC_008596.1 Mycobrowser_v3 CDS 113433 114407 . + 0 MSMEG_0089 MSMEG_0089 chromosome condensation protein identified by match to protein family HMM PF02678; match to protein family HMM PF05726 A0QNL7 No unknown NC_008596.1 Mycobrowser_v3 CDS 141232 141732 . + 0 MSMEG_0118 MSMEG_0118 conserved hypothetical protein identified by match to protein family HMM PF07336 A0QNP6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1709112 1709237 . + 0 MSMEG_1619 MSMEG_1619 hypothetical protein identified by Glimmer2; putative A0QSV8 No unknown NC_008596.1 Mycobrowser_v3 CDS 619744 620037 . + 0 MSMEG_0541 MSMEG_0541 hypothetical protein identified by Glimmer2; putative A0QPW4 No unknown NC_008596.1 Mycobrowser_v3 CDS 15256 15522 . + 0 MSMEG_0016 MSMEG_0016 conserved domain protein identified by match to protein family HMM PF03621 A0QNE8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3160719 3161813 . + 0 MSMEG_3088 MSMEG_3088 O-methyltransferase; this gene contains a premature stop which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 15525 17252 . + 0 MSMEG_0017 MSMEG_0017 ABC transporter, permease/ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF00664 A0QNE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3326308 3327319 . - 0 MSMEG_3243 MSMEG_3243 adenylate cyclase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00211 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3378146 3379142 . + 0 MSMEG_3299 MSMEG_3299 oxidoreductase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4591 6618 . + 0 MSMEG_0005 gyrB DNA gyrase, B subunit identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059 A0QNE0 No unknown Rv0005 Rv0005 NC_008596.1 Mycobrowser_v3 CDS 6648 9176 . + 0 MSMEG_0006 gyrA DNA gyrase, A subunit identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063 P48354 No unknown Rv0006 Rv0006 NC_008596.1 Mycobrowser_v3 CDS 9229 10011 . + 0 MSMEG_0007 MSMEG_0007 conserved hypothetical protein A0QNE2 No unknown Rv0007 Rv0007 NC_008596.1 Mycobrowser_v3 CDS 10184 10276 . + 0 MSMEG_0009 MSMEG_0009 hypothetical protein identified by Glimmer2; putative A0QNE3 No unknown NC_008596.1 Mycobrowser_v3 CDS 10411 11211 . + 0 MSMEG_0011 MSMEG_0011 FAD-binding 9, siderophore-interacting identified by match to protein family HMM PF04954; match to protein family HMM PF08021 A0QNE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 11215 12246 . + 0 MSMEG_0012 MSMEG_0012 ferric enterobactin transport system permease protein FepD identified by match to protein family HMM PF01032 A0QNE5 No unknown NC_008596.1 Mycobrowser_v3 CDS 13310 14140 . + 0 MSMEG_0015 MSMEG_0015 ferric enterobactin transport ATP-binding protein FepC identified by match to protein family HMM PF00005 A0QNE6 No unknown NC_008596.1 Mycobrowser_v3 CDS 14130 15098 . - 0 MSMEG_0014 MSMEG_0014 Formyl transferase identified by match to protein family HMM PF00551; match to protein family HMM PF02911 A0QNE7 No unknown NC_008596.1 Mycobrowser_v3 CDS 17249 19018 . + 0 MSMEG_0018 MSMEG_0018 ABC transporter, permease/ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF00664 A0QNF0 No unknown NC_008596.1 Mycobrowser_v3 CDS 19052 41623 . + 0 MSMEG_0019 MSMEG_0019 amino acid adenylation identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733 A0QNF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 306097 306360 . - 0 MSMEG_0273 MSMEG_0273 ethanolamine utilization protein EutN identified by match to protein family HMM PF03319 A0QP50 No unknown NC_008596.1 Mycobrowser_v3 CDS 41689 42636 . - 0 MSMEG_0020 MSMEG_0020 Periplasmic binding protein identified by match to protein family HMM PF01497 A0QNF2 No unknown NC_008596.1 Mycobrowser_v3 CDS 42944 43354 . + 0 MSMEG_0021 panD aspartate 1-decarboxylase identified by match to protein family HMM PF02261; match to protein family HMM TIGR00223 A0QNF3 No unknown NC_008596.1 Mycobrowser_v3 CDS 43366 44688 . + 0 MSMEG_0022 MSMEG_0022 L-ornithine 5-monooxygenase A0QNF4 No unknown NC_008596.1 Mycobrowser_v3 CDS 44692 45102 . - 0 MSMEG_0023 MSMEG_0023 conserved hypothetical protein A0QNF5 No unknown Rv0008c Rv0008c NC_008596.1 Mycobrowser_v3 CDS 45223 45750 . + 0 MSMEG_0024 MSMEG_0024 peptidyl-prolyl cis-trans isomerase B identified by match to protein family HMM PF00160 A0QNF6 No unknown Rv0009 Rv0009 NC_008596.1 Mycobrowser_v3 CDS 45854 46261 . - 0 MSMEG_0025 MSMEG_0025 conserved hypothetical protein A0QNF7 No unknown Rv0010c Rv0010c NC_008596.1 Mycobrowser_v3 CDS 46417 46701 . - 0 MSMEG_0026 MSMEG_0026 putative membrane protein identified by match to protein family HMM PF06781 A0QNF8 No unknown Rv0011c Rv0011c NC_008596.1 Mycobrowser_v3 CDS 46797 47546 . + 0 MSMEG_0027 MSMEG_0027 conserved hypothetical protein identified by match to protein family HMM PF05949 A0QNF9 No unknown Rv0012 Rv0012 NC_008596.1 Mycobrowser_v3 CDS 47564 48238 . + 0 MSMEG_0029 MSMEG_0029 anthranilate synthase component 2 identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566 A0QNG0 No unknown Rv0013 Rv0013 NC_008596.1 Mycobrowser_v3 CDS 48216 50093 . - 0 MSMEG_0028 MSMEG_0028 serine-threonine protein kinase identified by match to protein family HMM PF00069; match to protein family HMM PF03793 A0QNG1 No unknown Rv0014c Rv0014c NC_008596.1 Mycobrowser_v3 CDS 50090 51349 . - 0 MSMEG_0030 pknA serine/threonine protein kinase PknA identified by match to protein family HMM PF00069 A0QNG2 No unknown Rv0015c Rv0015c NC_008596.1 Mycobrowser_v3 CDS 67182 68117 . - 0 MSMEG_0047 MSMEG_0047 hypothetical protein identified by Glimmer2; putative A0QNH7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1496756 1497277 . + 0 MSMEG_1396 MSMEG_1396 LprB protein A0QS94 No unknown NC_008596.1 Mycobrowser_v3 CDS 51381 52856 . - 0 MSMEG_0031 MSMEG_0031 Penicillin binding protein transpeptidase domain protein identified by match to protein family HMM PF00905 A0QNG3 No unknown Rv0016c Rv0016c NC_008596.1 Mycobrowser_v3 CDS 52853 54268 . - 0 MSMEG_0032 MSMEG_0032 cell cycle protein, FtsW/RodA/SpoVE family protein identified by match to protein family HMM PF01098 A0QNG4 No unknown Rv0017c Rv0017c NC_008596.1 Mycobrowser_v3 CDS 70911 71690 . + 0 MSMEG_0052 MSMEG_0052 conserved hypothetical protein A0QNI2 No unknown NC_008596.1 Mycobrowser_v3 CDS 54265 55803 . - 0 MSMEG_0033 MSMEG_0033 protein phosphatase 2C identified by match to protein family HMM PF00481 A0QNG5 No unknown Rv0018c Rv0018c NC_008596.1 Mycobrowser_v3 CDS 55826 56293 . - 0 MSMEG_0034 MSMEG_0034 FHA domain protein identified by match to protein family HMM PF00498 A0QNG6 No unknown Rv0019c Rv0019c NC_008596.1 Mycobrowser_v3 CDS 56429 57892 . - 0 MSMEG_0035 MSMEG_0035 FHA domain protein identified by match to protein family HMM PF00498 A0QNG7 No unknown Rv0020c Rv0020c NC_008596.1 Mycobrowser_v3 CDS 58033 58140 . - 0 MSMEG_0036 MSMEG_0036 hypothetical protein identified by Glimmer2; putative A0QNG8 No unknown NC_008596.1 Mycobrowser_v3 CDS 58655 59029 . - 0 MSMEG_0039 MSMEG_0039 small membrane hydrophobic protein A0QNG9 No unknown NC_008596.1 Mycobrowser_v3 CDS 59041 59346 . - 0 MSMEG_0040 MSMEG_0040 conserved hypothetical protein A0QNH0 No unknown NC_008596.1 Mycobrowser_v3 CDS 59348 59824 . - 0 MSMEG_0041 MSMEG_0041 conserved hypothetical protein A0QNH1 No unknown NC_008596.1 Mycobrowser_v3 CDS 59900 60463 . + 0 MSMEG_0042 MSMEG_0042 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QNH2 No unknown NC_008596.1 Mycobrowser_v3 CDS 60479 61303 . - 0 MSMEG_0043 MSMEG_0043 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B identified by match to protein family HMM PF02900 A0QNH3 No unknown NC_008596.1 Mycobrowser_v3 CDS 61470 63548 . + 0 MSMEG_0044 MSMEG_0044 hypothetical protein identified by Glimmer2; putative A0QNH4 No unknown NC_008596.1 Mycobrowser_v3 tRNA 58144 58226 . + 0 MSMEG_0037 MSMEG_0037 tRNA-Leu No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 91173 91874 . + 0 MSMEG_0069 MSMEG_0069 translation initiation factor IF-2 protein A0QNJ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 92737 93072 . + 0 MSMEG_0070 MSMEG_0070 hypothetical protein identified by Glimmer2; putative A0QNK0 No unknown NC_008596.1 Mycobrowser_v3 CDS 63545 66013 . + 0 MSMEG_0045 MSMEG_0045 hypothetical protein identified by Glimmer2; putative A0QNH5 No unknown NC_008596.1 Mycobrowser_v3 CDS 66010 67167 . + 0 MSMEG_0046 MSMEG_0046 conserved hypothetical protein A0QNH6 No unknown NC_008596.1 Mycobrowser_v3 CDS 68769 69734 . - 0 MSMEG_0049 MSMEG_0049 pirin domain protein identified by match to protein family HMM PF02678; match to protein family HMM PF05726 A0QNH9 No unknown NC_008596.1 Mycobrowser_v3 CDS 69779 70045 . + 0 MSMEG_0050 MSMEG_0050 conserved hypothetical protein A0QNI0 No unknown NC_008596.1 Mycobrowser_v3 CDS 70234 70527 . - 0 MSMEG_0051 MSMEG_0051 transcription factor WhiB family protein identified by match to protein family HMM PF02467 A0QNI1 No unknown Rv3862c Rv3862c NC_008596.1 Mycobrowser_v3 CDS 99229 99585 . + 0 MSMEG_0075 MSMEG_0075 conserved hypothetical protein A0QNK3 No unknown NC_008596.1 Mycobrowser_v3 CDS 71738 72823 . + 0 MSMEG_0054 MSMEG_0054 ISMsm2, transposase identified by similarity to GB:CAD18826.1 A0QNI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 72820 74208 . - 0 MSMEG_0053 MSMEG_0053 conserved hypothetical protein A0QNI4 No unknown Rv3860 Rv3860 NC_008596.1 Mycobrowser_v3 CDS 74600 76177 . + 0 MSMEG_0055 MSMEG_0055 hypothetical protein identified by Glimmer2; putative A0QNI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 76213 76530 . + 0 MSMEG_0056 MSMEG_0056 hypothetical protein identified by Glimmer2; putative A0QNI6 No unknown NC_008596.1 Mycobrowser_v3 CDS 77398 77925 . + 0 MSMEG_0058 MSMEG_0058 conserved hypothetical protein A0QNI8 No unknown Rv3614c,Rv3867 Rv3614c,Rv3867 NC_008596.1 Mycobrowser_v3 CDS 85248 85541 . + 0 MSMEG_0063 MSMEG_0063 PE family protein A0QNJ3 No unknown Rv3872 Rv3872 NC_008596.1 Mycobrowser_v3 CDS 85616 86911 . + 0 MSMEG_0064 MSMEG_0064 ppe family protein identified by match to protein family HMM PF00823 A0QNJ4 No unknown Rv3873 Rv3873 NC_008596.1 Mycobrowser_v3 CDS 86997 87299 . + 0 MSMEG_0065 MSMEG_0065 conserved hypothetical protein A0QNJ5 No unknown Rv3874 Rv3874 NC_008596.1 Mycobrowser_v3 CDS 87331 87618 . + 0 MSMEG_0066 MSMEG_0066 early secretory antigenic target, 6 kDa A0QNJ6 No unknown Rv3875 Rv3875 NC_008596.1 Mycobrowser_v3 CDS 87738 89162 . + 0 MSMEG_0067 MSMEG_0067 conserved hypothetical protein A0QNJ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 93072 95339 . + 0 MSMEG_0071 MSMEG_0071 conserved hypothetical protein A0QNK1 No unknown Rv3879c Rv3879c NC_008596.1 Mycobrowser_v3 CDS 96469 97935 . + 0 MSMEG_0074 MSMEG_0074 IS1549, transposase identified by similarity to GP:2935133; match to protein family HMM PF01609 A0QNK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 99798 101360 . + 0 MSMEG_0076 MSMEG_0076 antigen MTB48 A0QNK4 No unknown Rv3881c Rv3881c NC_008596.1 Mycobrowser_v3 CDS 101776 102093 . - 0 MSMEG_0077 MSMEG_0077 hypothetical protein identified by Glimmer2; putative A0QNK5 No unknown NC_008596.1 Mycobrowser_v3 CDS 102127 102702 . - 0 MSMEG_0078 MSMEG_0078 hypothetical protein identified by Glimmer2; putative A0QNK6 No unknown NC_008596.1 Mycobrowser_v3 CDS 102936 103682 . - 0 MSMEG_0079 MSMEG_0079 hypothetical protein identified by Glimmer2; putative A0QNK7 No unknown NC_008596.1 Mycobrowser_v3 CDS 103713 104243 . - 0 MSMEG_0080 MSMEG_0080 conserved hypothetical protein A0QNK8 No unknown Rv3867 Rv3867 NC_008596.1 Mycobrowser_v3 CDS 104251 104583 . - 0 MSMEG_0081 MSMEG_0081 conserved hypothetical protein A0QNK9 No unknown Rv3880c Rv3880c NC_008596.1 Mycobrowser_v3 CDS 107565 107822 . - 0 MSMEG_0084 MSMEG_0084 phosphocarrier protein hpr identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003 A0QNL2 No unknown NC_008596.1 Mycobrowser_v3 CDS 107834 109849 . - 0 MSMEG_0085 MSMEG_0085 PTS system, Fru family protein, IIABC components identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427 A0QNL3 No unknown NC_008596.1 Mycobrowser_v3 CDS 109846 110829 . - 0 MSMEG_0086 MSMEG_0086 1-phosphofructokinase identified by match to protein family HMM PF00294 A0QNL4 No unknown NC_008596.1 Mycobrowser_v3 CDS 110826 111593 . - 0 MSMEG_0087 MSMEG_0087 glucitol operon repressor identified by match to protein family HMM PF00455; match to protein family HMM PF08220 A0QNL5 No unknown NC_008596.1 Mycobrowser_v3 CDS 111735 113369 . + 0 MSMEG_0088 ptsI phosphoenolpyruvate-protein phosphotransferase identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417 A0QNL6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1708535 1708825 . - 0 MSMEG_1618 MSMEG_1618 hypothetical protein identified by Glimmer2; putative A0QSV7 No unknown NC_008596.1 Mycobrowser_v3 CDS 114447 116594 . - 0 MSMEG_0090 MSMEG_0090 conserved hypothetical protein A0QNL8 No unknown NC_008596.1 Mycobrowser_v3 CDS 116600 117193 . - 0 MSMEG_0091 MSMEG_0091 putative transcriptional regulator A0QNL9 No unknown NC_008596.1 Mycobrowser_v3 CDS 117306 117941 . + 0 MSMEG_0092 MSMEG_0092 probable transcriptional regulatory protein identified by match to protein family HMM PF00440 A0QNM0 No unknown Rv0144 Rv0144 NC_008596.1 Mycobrowser_v3 CDS 118003 118965 . + 0 MSMEG_0093 MSMEG_0093 methyltransferase identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 A0QNM1 No unknown Rv0145 Rv0145 NC_008596.1 Mycobrowser_v3 CDS 118962 119897 . + 0 MSMEG_0095 MSMEG_0095 methyltransferase identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 A0QNM2 No unknown NC_008596.1 Mycobrowser_v3 CDS 119878 120057 . - 0 MSMEG_0094 MSMEG_0094 hypothetical protein identified by Glimmer2; putative A0QNM3 No unknown NC_008596.1 Mycobrowser_v3 CDS 120261 121115 . + 0 MSMEG_0096 MSMEG_0096 peroxisomal hydratase-dehydrogenase-epimerase identified by match to protein family HMM PF00106 A0QNM4 No unknown NC_008596.1 Mycobrowser_v3 CDS 121119 122084 . + 0 MSMEG_0097 MSMEG_0097 oxidoreductase, zinc-binding dehydrogenase family protein identified by match to protein family HMM PF00107 A0QNM5 No unknown Rv0149 Rv0149 NC_008596.1 Mycobrowser_v3 CDS 122105 122818 . + 0 MSMEG_0098 MSMEG_0098 methyltransferase identified by match to protein family HMM PF01209 A0QNM6 No unknown NC_008596.1 Mycobrowser_v3 CDS 122829 123314 . + 0 MSMEG_0099 MSMEG_0099 conserved hypothetical protein A0QNM7 No unknown NC_008596.1 Mycobrowser_v3 CDS 123311 123865 . + 0 MSMEG_0101 MSMEG_0101 conserved hypothetical protein A0QNM8 No unknown Rv1890c Rv1890c NC_008596.1 Mycobrowser_v3 CDS 123837 124643 . - 0 MSMEG_0100 MSMEG_0100 phosphotyrosine protein phosphatase ptpb A0QNM9 No unknown Rv0153c Rv0153c NC_008596.1 Mycobrowser_v3 CDS 124640 125875 . - 0 MSMEG_0102 MSMEG_0102 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QNN0 No unknown NC_008596.1 Mycobrowser_v3 CDS 125900 127099 . - 0 MSMEG_0103 MSMEG_0103 major facilitator family protein transporter identified by match to protein family HMM PF07690 A0QNN1 No unknown NC_008596.1 Mycobrowser_v3 CDS 127143 128024 . - 0 MSMEG_0104 MSMEG_0104 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QNN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 128750 129916 . + 0 MSMEG_0106 MSMEG_0106 sensory histidine kinase identified by match to protein family HMM PF02518 A0QNN4 No unknown Rv0845 Rv0845 NC_008596.1 Mycobrowser_v3 CDS 143535 144542 . + 0 MSMEG_0122 MSMEG_0122 putative periplasmic solute-binding protein identified by match to protein family HMM PF03401 A0QNQ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 129926 131527 . - 0 MSMEG_0107 MSMEG_0107 cell envelope-related function transcriptional attenuator common domain identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350 A0QNN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 131570 132709 . - 0 MSMEG_0108 MSMEG_0108 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QNN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 132711 134153 . - 0 MSMEG_0109 pntB NAD(P) transhydrogenase, beta subunit identified by similarity to SP:P07002; match to protein family HMM PF02233 A0QNN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 134172 135713 . - 0 MSMEG_0110 pntA NAD(P) transhydrogenase, alpha subunit identified by similarity to SP:P07001; match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00561 A0QNN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 135783 136787 . - 0 MSMEG_0111 MSMEG_0111 putative magnesium transport protein identified by match to protein family HMM PF01544 A0QNN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 136796 136912 . - 0 MSMEG_0112 MSMEG_0112 hypothetical protein identified by Glimmer2; putative A0QNP0 No unknown NC_008596.1 Mycobrowser_v3 CDS 136950 137810 . + 0 MSMEG_0113 MSMEG_0113 taurine transport system permease protein TauC identified by match to protein family HMM PF00528 A0QNP1 No unknown NC_008596.1 Mycobrowser_v3 CDS 137817 138845 . + 0 MSMEG_0114 MSMEG_0114 extracellular solute-binding protein, family protein 3 identified by match to protein family HMM PF04069 A0QNP2 No unknown NC_008596.1 Mycobrowser_v3 CDS 138829 139626 . + 0 MSMEG_0116 MSMEG_0116 taurine import ATP-binding protein TauB identified by match to protein family HMM PF00005 A0QNP3 No unknown NC_008596.1 Mycobrowser_v3 CDS 139607 140287 . - 0 MSMEG_0115 dehII haloacid dehalogenase, type II identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493 A0QNP4 No unknown NC_008596.1 Mycobrowser_v3 CDS 140284 141147 . - 0 MSMEG_0117 MSMEG_0117 hydrolase identified by match to protein family HMM PF00561 A0QNP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 141969 142628 . + 0 MSMEG_0120 MSMEG_0120 probable transcriptional regulatory protein identified by match to protein family HMM PF00440 A0QNP8 No unknown Rv0158 Rv0158 NC_008596.1 Mycobrowser_v3 CDS 142625 143398 . + 0 MSMEG_0121 MSMEG_0121 rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QNP9 No unknown NC_008596.1 Mycobrowser_v3 CDS 145067 146593 . + 0 MSMEG_0125 MSMEG_0125 integral membrane protein identified by match to protein family HMM PF01970 A0QNQ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 146549 147232 . - 0 MSMEG_0124 MSMEG_0124 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QNQ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 147229 148347 . - 0 MSMEG_0126 MSMEG_0126 mandelate racemase/muconate lactonizing enzyme identified by match to protein family HMM PF01188; match to protein family HMM PF02746 A0QNQ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 148387 149478 . - 0 MSMEG_0127 MSMEG_0127 oxidoreductase, zinc-binding dehydrogenase family protein identified by match to protein family HMM PF00107 A0QNQ5 No unknown Rv0162c Rv0162c NC_008596.1 Mycobrowser_v3 CDS 149514 149963 . + 0 MSMEG_0128 MSMEG_0128 thioesterase superfamily protein identified by match to protein family HMM PF03061 A0QNQ6 No unknown Rv0163 Rv0163 NC_008596.1 Mycobrowser_v3 CDS 149990 150424 . + 0 MSMEG_0129 MSMEG_0129 cyclase/dehydrase family protein similar to Streptomyces cyclase/dehydrase family protein; identified by match to protein family HMM PF03364 A0QNQ7 No unknown Rv0164 Rv0164 NC_008596.1 Mycobrowser_v3 CDS 150431 151123 . - 0 MSMEG_0130 MSMEG_0130 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392 A0QNQ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 151273 152907 . + 0 MSMEG_0131 MSMEG_0131 AMP-binding enzyme, putative identified by match to protein family HMM PF00501 A0QNQ9 No unknown Rv0166 Rv0166 NC_008596.1 Mycobrowser_v3 CDS 153100 153900 . + 0 MSMEG_0132 MSMEG_0132 conserved hypothetical protein identified by match to protein family HMM PF02405 A0QNR0 No unknown Rv0167,Rv0587 Rv0167,Rv0587 NC_008596.1 Mycobrowser_v3 CDS 3440233 3440370 . - 0 MSMEG_3368 MSMEG_3368 hypothetical protein identified by Glimmer2; putative A0QXN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 153902 154771 . + 0 MSMEG_0133 MSMEG_0133 ABC-transporter integral membrane protein identified by match to protein family HMM PF02405 A0QNR1 No unknown Rv0168,Rv0588 Rv0168,Rv0588 NC_008596.1 Mycobrowser_v3 CDS 154776 156005 . + 0 MSMEG_0134 MSMEG_0134 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QNR2 No unknown Rv0589 Rv0589 NC_008596.1 Mycobrowser_v3 CDS 156002 157033 . + 0 MSMEG_0135 MSMEG_0135 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QNR3 No unknown NC_008596.1 Mycobrowser_v3 CDS 157030 158604 . + 0 MSMEG_0136 MSMEG_0136 virulence factor Mce family protein, putative identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QNR4 No unknown Rv0171 Rv0171 NC_008596.1 Mycobrowser_v3 CDS 158623 160266 . + 0 MSMEG_0137 MSMEG_0137 virulence factor mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QNR5 No unknown Rv0172,Rv0592 Rv0172,Rv0592 NC_008596.1 Mycobrowser_v3 CDS 160266 161438 . + 0 MSMEG_0138 MSMEG_0138 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QNR6 No unknown Rv0173,Rv0593 Rv0173,Rv0593 NC_008596.1 Mycobrowser_v3 CDS 161440 162996 . + 0 MSMEG_0139 MSMEG_0139 mce-family protein mce1f identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QNR7 No unknown Rv0174 Rv0174 NC_008596.1 Mycobrowser_v3 CDS 162966 163574 . + 0 MSMEG_0140 MSMEG_0140 probable conserved mce associated membrane protein A0QNR8 No unknown Rv0175 Rv0175 NC_008596.1 Mycobrowser_v3 CDS 163571 164539 . + 0 MSMEG_0141 MSMEG_0141 probable conserved mce associated transmembrane protein identified by match to protein family HMM PF06271 A0QNR9 No unknown Rv0176 Rv0176 NC_008596.1 Mycobrowser_v3 CDS 164536 165084 . + 0 MSMEG_0142 MSMEG_0142 conserved hypothetical protein A0QNS0 No unknown Rv0177 Rv0177 NC_008596.1 Mycobrowser_v3 CDS 165051 165941 . + 0 MSMEG_0143 MSMEG_0143 probable conserved mce associated membrane protein A0QNS1 No unknown NC_008596.1 Mycobrowser_v3 CDS 165944 166612 . + 0 MSMEG_0145 MSMEG_0145 conserved hypothetical protein identified by match to protein family HMM PF06912 A0QNS2 No unknown NC_008596.1 Mycobrowser_v3 CDS 181519 182781 . + 0 MSMEG_0158 MSMEG_0158 formyl-coenzyme A transferase identified by match to protein family HMM PF02515 A0QNT6 No unknown NC_008596.1 Mycobrowser_v3 CDS 182884 183369 . + 0 MSMEG_0159 MSMEG_0159 formate dehydrogenase, gamma subunit identified by similarity to GB:CAA11233.1; match to protein family HMM PF01257 A0QNT7 No unknown NC_008596.1 Mycobrowser_v3 CDS 198371 198691 . - 0 MSMEG_0173 MSMEG_0173 hypothetical protein identified by Glimmer2; putative A0QNV1 No unknown NC_008596.1 Mycobrowser_v3 CDS 620034 620738 . + 0 MSMEG_0542 MSMEG_0542 antar domain protein identified by match to protein family HMM PF03861 A0QPW5 No unknown NC_008596.1 Mycobrowser_v3 CDS 166609 168477 . - 0 MSMEG_0144 MSMEG_0144 HNH endonuclease identified by match to protein family HMM PF01844; match to protein family HMM PF02720 A0QNS3 No unknown NC_008596.1 Mycobrowser_v3 CDS 168543 169361 . - 0 MSMEG_0146 MSMEG_0146 mosc domain protein identified by match to protein family HMM PF03473 A0QNS4 No unknown NC_008596.1 Mycobrowser_v3 CDS 169419 170333 . - 0 MSMEG_0147 MSMEG_0147 C-5 sterol desaturase A0QNS5 No unknown NC_008596.1 Mycobrowser_v3 CDS 766289 766657 . + 0 MSMEG_0683 MSMEG_0683 conserved hypothetical protein A0QQA3 No unknown Rv0333 Rv0333 NC_008596.1 Mycobrowser_v3 CDS 170367 170996 . - 0 MSMEG_0148 MSMEG_0148 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QNS6 No unknown NC_008596.1 Mycobrowser_v3 CDS 171077 172504 . - 0 MSMEG_0149 MSMEG_0149 ThiC family protein identified by match to protein family HMM PF01964 A0QNS7 No unknown NC_008596.1 Mycobrowser_v3 CDS 172501 173934 . - 0 MSMEG_0150 MSMEG_0150 NAD(P) transhydrogenase beta subunit identified by match to protein family HMM PF02233 A0QNS8 No unknown Rv0157 Rv0157 NC_008596.1 Mycobrowser_v3 CDS 173931 174254 . - 0 MSMEG_0151 MSMEG_0151 PntAB protein A0QNS9 No unknown Rv0156 Rv0156 NC_008596.1 Mycobrowser_v3 CDS 174258 175340 . - 0 MSMEG_0152 MSMEG_0152 Alanine dehydrogenase/pyridine nucleotide transhydrogenase identified by match to protein family HMM PF01262; match to protein family HMM PF05222 A0QNT0 No unknown Rv0155 Rv0155 NC_008596.1 Mycobrowser_v3 CDS 175555 176568 . + 0 MSMEG_0153 panE 2-dehydropantoate 2-reductase identified by match to protein family HMM PF02558; match to protein family HMM TIGR00745 A0QNT1 No unknown NC_008596.1 Mycobrowser_v3 CDS 176579 178012 . + 0 MSMEG_0154 pyk pyruvate kinase identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064 A0QNT2 No unknown NC_008596.1 Mycobrowser_v3 CDS 178054 178524 . - 0 MSMEG_0155 MSMEG_0155 transcriptional regulator identified by match to protein family HMM PF00989; match to protein family HMM TIGR00229 A0QNT3 No unknown NC_008596.1 Mycobrowser_v3 CDS 178631 179557 . + 0 MSMEG_0156 MSMEG_0156 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QNT4 No unknown Rv0117 Rv0117 NC_008596.1 Mycobrowser_v3 CDS 193685 194971 . + 0 MSMEG_0168 MSMEG_0168 formyl-coenzyme A transferase identified by match to protein family HMM PF02515 A0QNU6 No unknown NC_008596.1 Mycobrowser_v3 CDS 179717 181450 . + 0 MSMEG_0157 MSMEG_0157 oxalyl-CoA decarboxylase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 A0QNT5 No unknown Rv0118c Rv0118c NC_008596.1 Mycobrowser_v3 CDS 3981247 3981558 . - 0 MSMEG_3911 MSMEG_3911 oxidoreductase A0QZ63 No unknown NC_008596.1 Mycobrowser_v3 CDS 183366 184964 . + 0 MSMEG_0160 MSMEG_0160 formate dehydrogenase, beta subunit identified by similarity to GB:CAA11234.1; match to protein family HMM PF01512 A0QNT8 No unknown NC_008596.1 Mycobrowser_v3 CDS 199157 200293 . + 0 MSMEG_0175 MSMEG_0175 FAD dependent oxidoreductase, putative identified by match to protein family HMM PF01266 A0QNV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 306377 306898 . - 0 MSMEG_0274 MSMEG_0274 hypothetical protein identified by Glimmer2; putative A0QP51 No unknown NC_008596.1 Mycobrowser_v3 CDS 184961 187780 . + 0 MSMEG_0161 MSMEG_0161 formate dehydrogenase, alpha subunit identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591 A0QNT9 No unknown NC_008596.1 Mycobrowser_v3 CDS 187782 188006 . + 0 MSMEG_0162 MSMEG_0162 NAD-dependent formate dehydrogenase delta subunit A0QNU0 No unknown NC_008596.1 Mycobrowser_v3 CDS 188070 188381 . - 0 MSMEG_0163 MSMEG_0163 conserved hypothetical protein A0QNU1 No unknown Rv0250c Rv0250c NC_008596.1 Mycobrowser_v3 CDS 188427 189770 . - 0 MSMEG_0164 MSMEG_0164 transmembrane transport protein identified by match to protein family HMM PF07690 A0QNU2 No unknown NC_008596.1 Mycobrowser_v3 CDS 189944 190786 . + 0 MSMEG_0165 fdhD formate dehydrogenase family protein accessory protein FdhD identified by similarity to SP:P39756; match to protein family HMM PF02634; match to protein family HMM TIGR00129 A0QNU3 No unknown NC_008596.1 Mycobrowser_v3 CDS 190817 191545 . - 0 MSMEG_0166 MSMEG_0166 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QNU4 No unknown NC_008596.1 Mycobrowser_v3 CDS 191746 193149 . - 0 MSMEG_0167 MSMEG_0167 transmembrane transport protein identified by match to protein family HMM PF07690 A0QNU5 No unknown NC_008596.1 Mycobrowser_v3 CDS 195087 195203 . - 0 MSMEG_0169 MSMEG_0169 hypothetical protein identified by Glimmer2; putative A0QNU7 No unknown NC_008596.1 Mycobrowser_v3 CDS 195185 196567 . + 0 MSMEG_0170 MSMEG_0170 transmembrane transport protein identified by match to protein family HMM PF07690 A0QNU8 No unknown NC_008596.1 Mycobrowser_v3 CDS 196658 197587 . + 0 MSMEG_0171 MSMEG_0171 histone deacetylase superfamily protein identified by match to protein family HMM PF00850 A0QNU9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5964972 5965067 . - 0 MSMEG_5905 MSMEG_5905 hypothetical protein identified by Glimmer2; putative A0R4P3 No unknown NC_008596.1 Mycobrowser_v3 CDS 197588 198190 . - 0 MSMEG_0172 MSMEG_0172 probable conserved transmembrane protein, putative A0QNV0 No unknown NC_008596.1 Mycobrowser_v3 CDS 198688 199059 . - 0 MSMEG_0174 MSMEG_0174 putative inner membrane protein identified by match to protein family HMM PF02656 A0QNV2 No unknown NC_008596.1 Mycobrowser_v3 CDS 229280 229981 . - 0 MSMEG_0203 MSMEG_0203 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 200304 201158 . + 0 MSMEG_0176 MSMEG_0176 glutamine ABC transporter periplasmic-binding protein identified by match to protein family HMM PF00497 A0QNV4 No unknown NC_008596.1 Mycobrowser_v3 CDS 201116 202087 . + 0 MSMEG_0177 MSMEG_0177 ABC polar amino acid family protein transporter, inner membrane subunit identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 A0QNV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 202084 202866 . + 0 MSMEG_0178 MSMEG_0178 ATP-binding protein identified by match to protein family HMM PF00005 A0QNV6 No unknown NC_008596.1 Mycobrowser_v3 CDS 202876 203547 . - 0 MSMEG_0179 MSMEG_0179 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QNV7 No unknown NC_008596.1 Mycobrowser_v3 CDS 203664 204173 . - 0 MSMEG_0180 MSMEG_0180 putative HTH-type transcriptional regulator identified by match to protein family HMM PF00440 A0QNV8 No unknown Rv3405c Rv3405c NC_008596.1 Mycobrowser_v3 CDS 204225 205163 . + 0 MSMEG_0181 MSMEG_0181 alpha-ketoglutarate-dependent taurine dioxygenase identified by match to protein family HMM PF02668 A0QNV9 No unknown NC_008596.1 Mycobrowser_v3 CDS 205190 206347 . + 0 MSMEG_0182 MSMEG_0182 epoxide hydrolase 1 identified by match to protein family HMM PF00561; match to protein family HMM PF06441 A0QNW0 No unknown NC_008596.1 Mycobrowser_v3 CDS 206362 208134 . + 0 MSMEG_0184 MSMEG_0184 transferase identified by match to protein family HMM PF01019 A0QNW1 No unknown NC_008596.1 Mycobrowser_v3 CDS 208033 208584 . - 0 MSMEG_0183 MSMEG_0183 conserved hypothetical protein A0QNW2 No unknown NC_008596.1 Mycobrowser_v3 CDS 208581 211442 . - 0 MSMEG_0185 MSMEG_0185 MmpL6 protein identified by match to protein family HMM PF03176 A0QNW3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4700449 4700966 . + 0 MSMEG_4616 MSMEG_4616 acyl-CoA dehydrogenase family protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 211421 211915 . - 0 MSMEG_0186 MSMEG_0186 MmpS2 protein identified by match to protein family HMM PF05423 A0QNW4 No unknown Rv0506 Rv0506 NC_008596.1 Mycobrowser_v3 CDS 212103 212558 . + 0 MSMEG_0188 MSMEG_0188 MarR-family protein transcriptional regulator identified by match to protein family HMM PF01047 A0QNW5 No unknown NC_008596.1 Mycobrowser_v3 CDS 212548 213024 . - 0 MSMEG_0187 MSMEG_0187 acetyltransferase identified by match to protein family HMM PF00583 A0QNW6 No unknown NC_008596.1 Mycobrowser_v3 CDS 212999 214165 . - 0 MSMEG_0189 MSMEG_0189 conserved hypothetical protein identified by similarity to GB:CAC16516.1; match to protein family HMM PF03702 A0QNW7 No unknown NC_008596.1 Mycobrowser_v3 CDS 214183 215742 . - 0 MSMEG_0190 MSMEG_0190 integral membrane transport protein identified by match to protein family HMM PF00474 A0QNW8 No unknown NC_008596.1 Mycobrowser_v3 CDS 215751 216680 . - 0 MSMEG_0191 MSMEG_0191 BadF/BadG/BcrA/BcrD ATPase family protein identified by match to protein family HMM PF01869 A0QNW9 No unknown NC_008596.1 Mycobrowser_v3 CDS 216912 217814 . + 0 MSMEG_0192 MSMEG_0192 transcriptional regulator, RpiR family protein identified by match to protein family HMM PF01380; match to protein family HMM PF01418 A0QNX0 No unknown NC_008596.1 Mycobrowser_v3 CDS 217828 218724 . + 0 MSMEG_0193 MSMEG_0193 putative glucokinase regulator identified by match to protein family HMM TIGR00274 A0QNX1 No unknown NC_008596.1 Mycobrowser_v3 CDS 218725 219423 . - 0 MSMEG_0194 MSMEG_0194 serine esterase, cutinase family protein identified by match to protein family HMM PF01083 A0QNX2 No unknown NC_008596.1 Mycobrowser_v3 CDS 219598 221238 . + 0 MSMEG_0195 MSMEG_0195 steroid monooxygenase identified by match to protein family HMM PF01266; match to protein family HMM PF07992 A0QNX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 221243 222139 . + 0 MSMEG_0196 MSMEG_0196 putative dehydrogenase identified by match to protein family HMM PF00296 A0QNX4 No unknown NC_008596.1 Mycobrowser_v3 CDS 222149 222793 . - 0 MSMEG_0197 MSMEG_0197 nudix hydrolase identified by match to protein family HMM PF00293 A0QNX5 No unknown NC_008596.1 Mycobrowser_v3 CDS 222803 223936 . - 0 MSMEG_0198 MSMEG_0198 acyl-CoA dehydrogenase, C- domain protein identified by match to protein family HMM PF08028 A0QNX6 No unknown Rv3094c Rv3094c NC_008596.1 Mycobrowser_v3 CDS 225160 227712 . + 0 MSMEG_0200 MSMEG_0200 hypothetical protein identified by Glimmer2; putative A0QNX7 No unknown NC_008596.1 Mycobrowser_v3 CDS 227725 228231 . - 0 MSMEG_0201 MSMEG_0201 hypothetical protein identified by Glimmer2; putative A0QNX8 No unknown NC_008596.1 Mycobrowser_v3 CDS 273263 273844 . + 0 MSMEG_0242 MSMEG_0242 conserved hypothetical protein A0QP19 No unknown Rv0203 Rv0203 NC_008596.1 Mycobrowser_v3 CDS 227950 229272 . + 0 MSMEG_0202 MSMEG_0202 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 259691 259990 . - 0 MSMEG_0231 MSMEG_0231 conserved hypothetical protein identified by match to protein family HMM PF01910; match to protein family HMM TIGR00106 A0QP08 No unknown Rv1898 Rv1898 NC_008596.1 Mycobrowser_v3 CDS 230210 232255 . + 0 MSMEG_0204 MSMEG_0204 hypothetical protein identified by Glimmer2; putative A0QNY1 No unknown NC_008596.1 Mycobrowser_v3 CDS 232344 232667 . - 0 MSMEG_0205 MSMEG_0205 tetracenomycin polyketide synthesis hydroxylase TcmH identified by match to protein family HMM PF03992 A0QNY2 No unknown NC_008596.1 Mycobrowser_v3 CDS 232728 233168 . + 0 MSMEG_0207 MSMEG_0207 MarR-family protein transcriptional regulator identified by match to protein family HMM PF01047; match to protein family HMM PF01978 A0QNY3 No unknown NC_008596.1 Mycobrowser_v3 CDS 233161 235296 . - 0 MSMEG_0206 MSMEG_0206 acyltransferase 3 identified by match to protein family HMM PF01757 A0QNY4 No unknown NC_008596.1 Mycobrowser_v3 CDS 235408 235785 . + 0 MSMEG_0208 MSMEG_0208 ribonuclease identified by match to protein family HMM PF00545 A0QNY5 No unknown NC_008596.1 Mycobrowser_v3 CDS 235782 236060 . + 0 MSMEG_0209 MSMEG_0209 ribonuclease inhibitor A0QNY6 No unknown NC_008596.1 Mycobrowser_v3 CDS 236061 237149 . - 0 MSMEG_0210 MSMEG_0210 LprO protein A0QNY7 No unknown Rv0179c Rv0179c NC_008596.1 Mycobrowser_v3 CDS 265224 265913 . + 0 MSMEG_0236 MSMEG_0236 putative conserved transmembrane protein A0QP13 No unknown Rv0200 Rv0200 NC_008596.1 Mycobrowser_v3 CDS 649562 649978 . + 0 MSMEG_0575 MSMEG_0575 MmpS1 protein identified by match to protein family HMM PF05423 A0QPZ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 237244 239607 . - 0 MSMEG_0211 MSMEG_0211 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0QNY8 No unknown NC_008596.1 Mycobrowser_v3 CDS 239607 240026 . - 0 MSMEG_0212 MSMEG_0212 lyase identified by match to protein family HMM PF00903 A0QNY9 No unknown NC_008596.1 Mycobrowser_v3 CDS 240031 240471 . - 0 MSMEG_0213 MSMEG_0213 transcriptional regulator identified by match to protein family HMM PF00165 A0QNZ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 240488 241771 . - 0 MSMEG_0214 MSMEG_0214 L-sorbosone dehydrogenase A0QNZ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 241749 242465 . - 0 MSMEG_0215 MSMEG_0215 YhhW family protein identified by match to protein family HMM PF02678 A0QNZ2 No unknown Rv0181c Rv0181c NC_008596.1 Mycobrowser_v3 CDS 242603 243397 . + 0 MSMEG_0216 MSMEG_0216 3-hydroxyacyl-CoA dehydrogenase identified by match to protein family HMM PF00106 A0QNZ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 243477 244601 . - 0 MSMEG_0217 MSMEG_0217 alcohol dehydrogenase B identified by match to protein family HMM PF00107 A0QNZ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 244773 245267 . + 0 MSMEG_0218 MSMEG_0218 3-demethylubiquinone-9 3-methyltransferase identified by match to protein family HMM PF06983 A0QNZ5 No unknown NC_008596.1 Mycobrowser_v3 tRNA 760001 760074 . - 0 MSMEG_0677 MSMEG_0677 tRNA-Gly No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 245271 246293 . - 0 MSMEG_0219 MSMEG_0219 RNA polymerase sigma-70 factor, family protein identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02960 A0QNZ6 No unknown Rv0182c Rv0182c NC_008596.1 Mycobrowser_v3 CDS 246357 247199 . + 0 MSMEG_0220 MSMEG_0220 monoglyceride lipase identified by match to protein family HMM PF00561 A0QNZ7 No unknown Rv0183 Rv0183 NC_008596.1 Mycobrowser_v3 CDS 247214 248173 . + 0 MSMEG_0221 MSMEG_0221 secreted protein A0QNZ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 248214 248957 . + 0 MSMEG_0222 MSMEG_0222 conserved hypothetical protein A0QNZ9 No unknown Rv0184 Rv0184 NC_008596.1 Mycobrowser_v3 CDS 248954 249436 . + 0 MSMEG_0223 MSMEG_0223 conserved hypothetical protein A0QP00 No unknown Rv0185 Rv0185 NC_008596.1 Mycobrowser_v3 CDS 249456 250112 . + 0 MSMEG_0224 MSMEG_0224 O-methyltransferase MdmC identified by match to protein family HMM PF01135; match to protein family HMM PF01596 A0QP01 No unknown Rv0187 Rv0187 NC_008596.1 Mycobrowser_v3 CDS 293084 293794 . - 0 MSMEG_0258 MSMEG_0258 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QP36 No unknown NC_008596.1 Mycobrowser_v3 CDS 250120 253017 . - 0 MSMEG_0225 MSMEG_0225 MmpL4 protein identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833 A0QP02 No unknown Rv0676c Rv0676c NC_008596.1 Mycobrowser_v3 CDS 253014 253442 . - 0 MSMEG_0226 MSMEG_0226 MmpS5 protein identified by match to protein family HMM PF05423 A0QP03 No unknown Rv0677c Rv0677c NC_008596.1 Mycobrowser_v3 CDS 253688 254257 . + 0 MSMEG_0227 MSMEG_0227 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QP04 No unknown NC_008596.1 Mycobrowser_v3 CDS 254330 257482 . + 0 MSMEG_0228 MSMEG_0228 adenylate and Guanylate cyclase catalytic domain protein identified by match to protein family HMM PF00211 A0QP05 No unknown NC_008596.1 Mycobrowser_v3 CDS 1880724 1881143 . + 0 MSMEG_1802 MSMEG_1802 ChaB protein identified by match to protein family HMM PF06150 A0QTD6 No unknown NC_008596.1 Mycobrowser_v3 CDS 274044 274394 . + 0 MSMEG_0243 MSMEG_0243 conserved hypothetical protein A0QP20 No unknown NC_008596.1 Mycobrowser_v3 CDS 257573 259288 . - 0 MSMEG_0229 ilvD dihydroxy-acid dehydratase identified by match to protein family HMM PF00920; match to protein family HMM TIGR00110 A0QP06 No unknown Rv0189c Rv0189c NC_008596.1 Mycobrowser_v3 CDS 259367 259672 . + 0 MSMEG_0230 MSMEG_0230 conserved hypothetical protein identified by match to protein family HMM PF02583 A0QP07 No unknown Rv0190 Rv0190 NC_008596.1 Mycobrowser_v3 CDS 260053 261282 . + 0 MSMEG_0232 MSMEG_0232 sugar transporter family protein identified by match to protein family HMM PF07690 A0QP09 No unknown Rv0191 Rv0191 NC_008596.1 Mycobrowser_v3 CDS 261440 262480 . + 0 MSMEG_0233 MSMEG_0233 lipoprotein Lpps identified by match to protein family HMM PF03734 A0QP10 No unknown Rv0192 Rv0192 NC_008596.1 Mycobrowser_v3 CDS 262543 264543 . - 0 MSMEG_0234 MSMEG_0234 metallopeptidase identified by match to protein family HMM PF01431; match to protein family HMM PF05649 A0QP11 No unknown Rv0198c Rv0198c NC_008596.1 Mycobrowser_v3 CDS 264607 265227 . + 0 MSMEG_0235 MSMEG_0235 probable conserved membrane protein A0QP12 No unknown Rv0199 Rv0199 NC_008596.1 Mycobrowser_v3 CDS 662508 662897 . - 0 MSMEG_0586 MSMEG_0586 stas domain, putative identified by match to protein family HMM PF01740 A0QQ09 No unknown Rv0516c Rv0516c NC_008596.1 Mycobrowser_v3 CDS 266047 267453 . + 0 MSMEG_0237 MSMEG_0237 ISMsm3, transposase identified by similarity to GP:4838457; match to protein family HMM PF01609 A0QP14 No unknown NC_008596.1 Mycobrowser_v3 CDS 267632 268102 . - 0 MSMEG_0238 MSMEG_0238 O-acetylhomoserine/O-acetylserine sulfhydrylase identified by match to protein family HMM PF02629 A0QP15 No unknown NC_008596.1 Mycobrowser_v3 CDS 268095 269390 . - 0 MSMEG_0239 MSMEG_0239 O-acetylhomoserine/O-acetylserine sulfhydrylase identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326 A0QP16 No unknown NC_008596.1 Mycobrowser_v3 CDS 269466 270074 . - 0 MSMEG_0240 MSMEG_0240 conserved hypothetical protein A0QP17 No unknown Rv0201c Rv0201c NC_008596.1 Mycobrowser_v3 CDS 270077 272941 . - 0 MSMEG_0241 MSMEG_0241 MmpL11 protein identified by match to protein family HMM PF03176 A0QP18 No unknown Rv0202c Rv0202c NC_008596.1 Mycobrowser_v3 CDS 1881247 1881663 . + 0 MSMEG_1803 MSMEG_1803 RsbW protein A0QTD7 No unknown Rv3287c Rv3287c NC_008596.1 Mycobrowser_v3 CDS 274400 275140 . + 0 MSMEG_0244 MSMEG_0244 two component response transcriptional regulatory protein prra identified by match to protein family HMM PF00072; match to protein family HMM PF00486 A0QP21 No unknown NC_008596.1 Mycobrowser_v3 CDS 275161 276513 . + 0 MSMEG_0246 MSMEG_0246 sensor-type histidine kinase PrrB identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 A0QP22 No unknown NC_008596.1 Mycobrowser_v3 CDS 276856 278070 . - 0 MSMEG_0247 MSMEG_0247 secreted peptidase identified by match to protein family HMM PF01551 A0QP24 No unknown NC_008596.1 Mycobrowser_v3 CDS 278070 279161 . - 0 MSMEG_0248 MSMEG_0248 conserved hypothetical protein identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374 A0QP25 No unknown Rv0204c Rv0204c NC_008596.1 Mycobrowser_v3 CDS 279235 280374 . + 0 MSMEG_0249 MSMEG_0249 integral membrane protein identified by match to protein family HMM PF01594 A0QP26 No unknown Rv0205 Rv0205 NC_008596.1 Mycobrowser_v3 CDS 293906 294721 . + 0 MSMEG_0260 MSMEG_0260 DNA-binding protein A0QP37 No unknown NC_008596.1 Mycobrowser_v3 CDS 294737 295729 . + 0 MSMEG_0261 MSMEG_0261 p40 protein A0QP38 No unknown Rv0216 Rv0216 NC_008596.1 Mycobrowser_v3 CDS 280382 283423 . - 0 MSMEG_0250 MSMEG_0250 membrane protein, MmpL family protein A0QP27 No unknown Rv0206c Rv0206c NC_008596.1 Mycobrowser_v3 CDS 283518 284216 . - 0 MSMEG_0251 MSMEG_0251 conserved hypothetical protein A0QP28 No unknown Rv0207c Rv0207c NC_008596.1 Mycobrowser_v3 CDS 284219 284941 . - 0 MSMEG_0252 trmB tRNA (guanine-N(7)-)-methyltransferase identified by match to protein family HMM PF02390; match to protein family HMM TIGR00091 A0QP29 No unknown Rv0208c Rv0208c NC_008596.1 Mycobrowser_v3 CDS 285164 286186 . + 0 MSMEG_0253 MSMEG_0253 conserved hypothetical protein A0QP30 No unknown Rv0209 Rv0209 NC_008596.1 Mycobrowser_v3 CDS 286183 287649 . + 0 MSMEG_0254 MSMEG_0254 conserved hypothetical protein A0QP31 No unknown Rv0210 Rv0210 NC_008596.1 Mycobrowser_v3 CDS 302495 303274 . - 0 MSMEG_0268 MSMEG_0268 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF02082; match to protein family HMM PF07702 A0QP45 No unknown NC_008596.1 Mycobrowser_v3 CDS 303324 304103 . - 0 MSMEG_0269 MSMEG_0269 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QP46 No unknown NC_008596.1 Mycobrowser_v3 CDS 287807 289633 . + 0 MSMEG_0255 MSMEG_0255 phosphoenolpyruvate carboxykinase identified by match to protein family HMM PF00821 A0QP32 No unknown Rv0211 Rv0211 NC_008596.1 Mycobrowser_v3 CDS 289749 290651 . + 0 MSMEG_0256 MSMEG_0256 conserved hypothetical protein A0QP33 No unknown Rv3714c Rv3714c NC_008596.1 Mycobrowser_v3 CDS 306901 307509 . - 0 MSMEG_0275 MSMEG_0275 bacterial microcompartments protein family protein identified by match to protein family HMM PF00936 A0QP52 No unknown NC_008596.1 Mycobrowser_v3 CDS 290685 292199 . + 0 MSMEG_0257 MSMEG_0257 acyl-CoA synthase identified by match to protein family HMM PF00501 A0QP34 No unknown Rv0214 Rv0214 NC_008596.1 Mycobrowser_v3 CDS 292201 293106 . + 0 MSMEG_0259 MSMEG_0259 enoyl-CoA hydratase/isomerase identified by match to protein family HMM PF00378 A0QP35 No unknown NC_008596.1 Mycobrowser_v3 CDS 663229 663549 . + 0 MSMEG_0587 rhaU L-rhamnose 1-epimerase identified by match to protein family HMM PF05336 A0QQ10 No unknown NC_008596.1 Mycobrowser_v3 CDS 295766 296872 . + 0 MSMEG_0262 MSMEG_0262 conserved hypothetical protein A0QP39 No unknown NC_008596.1 Mycobrowser_v3 CDS 296866 298137 . + 0 MSMEG_0263 MSMEG_0263 amidohydrolase 3 identified by match to protein family HMM PF07969 A0QP40 No unknown NC_008596.1 Mycobrowser_v3 CDS 298158 299276 . + 0 MSMEG_0264 MSMEG_0264 transmembrane transport protein identified by match to protein family HMM PF07690 A0QP41 No unknown NC_008596.1 Mycobrowser_v3 CDS 299314 300771 . + 0 MSMEG_0266 MSMEG_0266 arginine decarboxylase identified by match to protein family HMM PF01276; match to protein family HMM PF03711 A0QP42 No unknown NC_008596.1 Mycobrowser_v3 CDS 300761 301390 . - 0 MSMEG_0265 MSMEG_0265 uracil DNA glycosylase superfamily protein identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758 A0QP43 No unknown NC_008596.1 Mycobrowser_v3 CDS 301478 302494 . + 0 MSMEG_0267 MSMEG_0267 esterase identified by match to protein family HMM PF07859 A0QP44 No unknown NC_008596.1 Mycobrowser_v3 CDS 316060 316854 . - 0 MSMEG_0284 MSMEG_0284 ribosyldihydronicotinamide dehydrogenase (quinone) identified by match to protein family HMM PF02525 A0QP61 No unknown NC_008596.1 Mycobrowser_v3 CDS 304140 305144 . - 0 MSMEG_0270 MSMEG_0270 aminoglycoside phosphotransferase identified by match to protein family HMM PF01636 A0QP47 No unknown NC_008596.1 Mycobrowser_v3 CDS 305144 305800 . - 0 MSMEG_0271 MSMEG_0271 conserved hypothetical protein A0QP48 No unknown NC_008596.1 Mycobrowser_v3 CDS 305803 306084 . - 0 MSMEG_0272 MSMEG_0272 propanediol utilization protein PduA identified by match to protein family HMM PF00936 A0QP49 No unknown NC_008596.1 Mycobrowser_v3 CDS 307518 309101 . - 0 MSMEG_0276 MSMEG_0276 aldehyde-alcohol dehydrogenase identified by match to protein family HMM PF00171 A0QP53 No unknown NC_008596.1 Mycobrowser_v3 CDS 309098 310378 . - 0 MSMEG_0277 MSMEG_0277 putative aminotransferase identified by match to protein family HMM PF00202 A0QP54 No unknown NC_008596.1 Mycobrowser_v3 CDS 310563 312098 . + 0 MSMEG_0279 MSMEG_0279 amino acid permease identified by match to protein family HMM PF00324 A0QP55 No unknown NC_008596.1 Mycobrowser_v3 CDS 312095 312322 . - 0 MSMEG_0278 MSMEG_0278 hypothetical protein identified by Glimmer2; putative A0QP56 No unknown NC_008596.1 Mycobrowser_v3 CDS 312359 313258 . - 0 MSMEG_0280 MSMEG_0280 alpha/beta hydrolase fold identified by match to protein family HMM PF07859 A0QP57 No unknown Rv0217c Rv0217c NC_008596.1 Mycobrowser_v3 CDS 313349 314920 . + 0 MSMEG_0281 MSMEG_0281 choline dehydrogenase identified by match to protein family HMM PF00732; match to protein family HMM PF05199 A0QP58 No unknown NC_008596.1 Mycobrowser_v3 CDS 314913 315233 . + 0 MSMEG_0282 MSMEG_0282 conserved hypothetical protein identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118 A0QP59 No unknown NC_008596.1 Mycobrowser_v3 CDS 315285 316055 . + 0 MSMEG_0283 MSMEG_0283 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106 A0QP60 No unknown NC_008596.1 Mycobrowser_v3 CDS 316851 317453 . - 0 MSMEG_0285 MSMEG_0285 transcriptional regulator TetR family protein identified by match to protein family HMM PF00440 A0QP62 No unknown NC_008596.1 Mycobrowser_v3 CDS 317634 318320 . - 0 MSMEG_0286 MSMEG_0286 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07702 A0QP63 No unknown NC_008596.1 Mycobrowser_v3 CDS 318317 318844 . - 0 MSMEG_0287 MSMEG_0287 conserved hypothetical protein A0QP64 No unknown NC_008596.1 Mycobrowser_v3 CDS 318960 320069 . + 0 MSMEG_0288 MSMEG_0288 FAD dependent oxidoreductase, putative identified by match to protein family HMM PF01266 A0QP65 No unknown NC_008596.1 Mycobrowser_v3 CDS 320261 321361 . + 0 MSMEG_0289 MSMEG_0289 alpha/beta hydrolase fold family protein identified by match to protein family HMM PF07859 A0QP66 No unknown Rv0220 Rv0220 NC_008596.1 Mycobrowser_v3 CDS 321386 322804 . + 0 MSMEG_0290 MSMEG_0290 acyltransferase, ws/dgat/mgat subfamily protein identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946 A0QP67 No unknown Rv0221 Rv0221 NC_008596.1 Mycobrowser_v3 CDS 322807 323652 . - 0 MSMEG_0291 MSMEG_0291 dioxygenase, TauD/TfdA family protein identified by match to protein family HMM PF02668 A0QP68 No unknown NC_008596.1 Mycobrowser_v3 CDS 323681 324010 . - 0 MSMEG_0292 MSMEG_0292 conserved hypothetical protein A0QP69 No unknown NC_008596.1 Mycobrowser_v3 CDS 324012 325277 . - 0 MSMEG_0293 MSMEG_0293 Rieske [2Fe-2S] domain protein identified by match to protein family HMM PF00355 A0QP70 No unknown NC_008596.1 Mycobrowser_v3 CDS 325317 326060 . - 0 MSMEG_0294 fabG 3-oxoacyl-(acyl-carrier-protein) reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370 A0QP71 No unknown NC_008596.1 Mycobrowser_v3 CDS 678969 679124 . - 0 MSMEG_0602 MSMEG_0602 hypothetical protein identified by Glimmer2; putative A0QQ25 No unknown NC_008596.1 Mycobrowser_v3 CDS 326057 327133 . - 0 MSMEG_0295 MSMEG_0295 oxidoreductase, FAD-binding identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0QP72 No unknown NC_008596.1 Mycobrowser_v3 CDS 327192 327647 . - 0 MSMEG_0296 MSMEG_0296 transcriptional regulator, MarR family protein identified by match to protein family HMM PF01047 A0QP73 No unknown NC_008596.1 Mycobrowser_v3 CDS 327678 328937 . - 0 MSMEG_0297 MSMEG_0297 amidohydrolase identified by match to protein family HMM PF01979; match to protein family HMM PF07969 A0QP74 No unknown Rv0074 Rv0074 NC_008596.1 Mycobrowser_v3 CDS 328934 329275 . - 0 MSMEG_0298 MSMEG_0298 conserved hypothetical protein A0QP75 No unknown NC_008596.1 Mycobrowser_v3 CDS 329279 330544 . - 0 MSMEG_0299 MSMEG_0299 Rieske [2Fe-2S] domain protein identified by match to protein family HMM PF00355 A0QP76 No unknown NC_008596.1 Mycobrowser_v3 CDS 391385 391987 . + 0 MSMEG_0352 MSMEG_0352 conserved hypothetical protein A0QPC7 No unknown Rv1972 Rv1972 NC_008596.1 Mycobrowser_v3 CDS 330792 331799 . + 0 MSMEG_0300 MSMEG_0300 amidohydrolase family protein identified by match to protein family HMM PF04909 A0QP77 No unknown NC_008596.1 Mycobrowser_v3 CDS 331803 333170 . - 0 MSMEG_0301 MSMEG_0301 oxidoreductase, FAD-binding identified by match to protein family HMM PF01565; match to protein family HMM PF02913 A0QP78 No unknown NC_008596.1 Mycobrowser_v3 CDS 333272 334264 . + 0 MSMEG_0303 MSMEG_0303 alcohol dehydrogenase, zinc-containing identified by match to protein family HMM PF00107 A0QP79 No unknown NC_008596.1 Mycobrowser_v3 CDS 334261 335472 . - 0 MSMEG_0302 MSMEG_0302 peptidase, S9A/B/C families identified by match to protein family HMM PF00326; match to protein family HMM PF07859 A0QP80 No unknown Rv1426c Rv1426c NC_008596.1 Mycobrowser_v3 CDS 380208 381053 . - 0 MSMEG_0342 MSMEG_0342 hypothetical protein identified by Glimmer2; putative A0QPB7 No unknown NC_008596.1 Mycobrowser_v3 CDS 335465 337096 . - 0 MSMEG_0304 MSMEG_0304 acyl-CoA synthase identified by match to protein family HMM PF00501 A0QP81 No unknown Rv1427c Rv1427c NC_008596.1 Mycobrowser_v3 CDS 337102 337911 . - 0 MSMEG_0305 MSMEG_0305 acyltransferase domain protein identified by match to protein family HMM PF01553 A0QP82 No unknown Rv1428c Rv1428c NC_008596.1 Mycobrowser_v3 CDS 337990 338826 . + 0 MSMEG_0306 MSMEG_0306 arylamine N-acetyltransferase identified by match to protein family HMM PF00797 A0QP83 No unknown Rv3566c Rv3566c NC_008596.1 Mycobrowser_v3 CDS 338897 339805 . + 0 MSMEG_0307 MSMEG_0307 transcriptional regulator, AraC family protein A0QP84 No unknown NC_008596.1 Mycobrowser_v3 CDS 339809 340336 . + 0 MSMEG_0308 MSMEG_0308 dihydrofolate reductase A0QP85 No unknown NC_008596.1 Mycobrowser_v3 CDS 340411 341904 . - 0 MSMEG_0309 MSMEG_0309 aldehyde dehydrogenase family protein identified by match to protein family HMM PF00171 A0QP86 No unknown Rv0223c Rv0223c NC_008596.1 Mycobrowser_v3 CDS 342748 343923 . + 0 MSMEG_0311 MSMEG_0311 glycosyltransferase identified by match to protein family HMM PF00534 A0QP87 No unknown Rv0225 Rv0225 NC_008596.1 Mycobrowser_v3 CDS 343930 344559 . - 0 MSMEG_0312 eda 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase identified by similarity to SP:P10177; match to protein family HMM PF01081; match to protein family HMM TIGR01182 A0QP88 No unknown NC_008596.1 Mycobrowser_v3 CDS 344556 346385 . - 0 MSMEG_0313 edd phosphogluconate dehydratase identified by similarity to SP:P25530; match to protein family HMM PF00920; match to protein family HMM TIGR01196 A0QP89 No unknown NC_008596.1 Mycobrowser_v3 CDS 361710 363317 . + 0 MSMEG_0326 MSMEG_0326 AMP-dependent synthetase and ligase identified by match to protein family HMM PF00501 A0QPA1 No unknown NC_008596.1 Mycobrowser_v3 CDS 346382 347869 . - 0 MSMEG_0314 zwf glucose-6-phosphate 1-dehydrogenase identified by similarity to SP:P22992; match to protein family HMM PF00479; match to protein family HMM PF02781; match to protein family HMM TIGR00871 A0QP90 No unknown NC_008596.1 Mycobrowser_v3 CDS 348060 349247 . + 0 MSMEG_0316 MSMEG_0316 putative NagC regulator identified by match to protein family HMM PF00480 A0QP91 No unknown NC_008596.1 Mycobrowser_v3 CDS 381177 381809 . - 0 MSMEG_0343 MSMEG_0343 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QPB8 No unknown NC_008596.1 Mycobrowser_v3 CDS 349207 350844 . - 0 MSMEG_0315 MSMEG_0315 probable conserved transmembrane protein A0QP92 No unknown Rv0226c Rv0226c NC_008596.1 Mycobrowser_v3 CDS 350874 352070 . - 0 MSMEG_0317 MSMEG_0317 conserved hypothetical protein A0QP93 No unknown Rv0227c Rv0227c NC_008596.1 Mycobrowser_v3 CDS 701225 701518 . + 0 MSMEG_0620 MSMEG_0620 pe family protein A0QQ43 No unknown Rv0287 Rv0287 NC_008596.1 Mycobrowser_v3 CDS 352236 353429 . + 0 MSMEG_0319 MSMEG_0319 acyltransferase identified by match to protein family HMM PF01757 A0QP94 No unknown Rv0228 Rv0228 NC_008596.1 Mycobrowser_v3 CDS 353392 354879 . - 0 MSMEG_0318 MSMEG_0318 AMP-dependent synthetase and ligase identified by match to protein family HMM PF00501 A0QP95 No unknown NC_008596.1 Mycobrowser_v3 CDS 354881 355858 . - 0 MSMEG_0320 MSMEG_0320 putative phosphotriesterase identified by match to protein family HMM PF02126 A0QP96 No unknown Rv0230c Rv0230c NC_008596.1 Mycobrowser_v3 CDS 355916 358708 . - 0 MSMEG_0321 MSMEG_0321 transcriptional regulator identified by match to protein family HMM PF00196; match to protein family HMM PF07721 A0QP97 No unknown NC_008596.1 Mycobrowser_v3 CDS 359235 360470 . - 0 MSMEG_0323 MSMEG_0323 acyl-CoA dehydrogenase, short-chain specific, putative identified by match to protein family HMM PF08028 A0QP98 No unknown NC_008596.1 Mycobrowser_v3 CDS 360723 361178 . + 0 MSMEG_0324 MSMEG_0324 conserved hypothetical protein identified by match to protein family HMM PF07366; match to protein family HMM TIGR02096 A0QP99 No unknown NC_008596.1 Mycobrowser_v3 CDS 361191 361703 . + 0 MSMEG_0325 MSMEG_0325 conserved hypothetical protein identified by match to protein family HMM TIGR02096 A0QPA0 No unknown NC_008596.1 Mycobrowser_v3 CDS 376204 377340 . + 0 MSMEG_0338 MSMEG_0338 acyl-CoA dehydrogenase fadE12 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QPB3 No unknown NC_008596.1 Mycobrowser_v3 CDS 363333 364835 . + 0 MSMEG_0327 MSMEG_0327 aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0QPA2 No unknown NC_008596.1 Mycobrowser_v3 CDS 364857 365306 . + 0 MSMEG_0328 MSMEG_0328 hypothetical protein identified by Glimmer2; putative A0QPA3 No unknown NC_008596.1 Mycobrowser_v3 CDS 365303 365797 . + 0 MSMEG_0329 MSMEG_0329 FMN oxidoreductase identified by match to protein family HMM PF01613 A0QPA4 No unknown NC_008596.1 Mycobrowser_v3 CDS 365798 366985 . - 0 MSMEG_0330 MSMEG_0330 transcriptional regulator, LuxR family protein identified by match to protein family HMM PF00196 A0QPA5 No unknown NC_008596.1 Mycobrowser_v3 CDS 382067 382837 . + 0 MSMEG_0344 MSMEG_0344 conserved hypothetical protein identified by match to protein family HMM PF02405 A0QPB9 No unknown NC_008596.1 Mycobrowser_v3 CDS 366982 368034 . - 0 MSMEG_0331 MSMEG_0331 transcriptional regulator, LuxR family protein identified by match to protein family HMM PF00196; match to protein family HMM PF01590 A0QPA6 No unknown NC_008596.1 Mycobrowser_v3 CDS 368223 369158 . + 0 MSMEG_0332 MSMEG_0332 2-nitropropane dioxygenase, NPD identified by match to protein family HMM PF03060 A0QPA7 No unknown NC_008596.1 Mycobrowser_v3 CDS 369275 370873 . + 0 MSMEG_0333 MSMEG_0333 Carboxyl transferase domain protein identified by match to protein family HMM PF01039 A0QPA8 No unknown NC_008596.1 Mycobrowser_v3 CDS 370879 372888 . + 0 MSMEG_0334 MSMEG_0334 acetyl-/propionyl-coenzyme A carboxylase alpha chain identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF01071; match to protein family HMM PF02785; match to protein family HMM PF02786 A0QPA9 No unknown NC_008596.1 Mycobrowser_v3 CDS 372885 373643 . + 0 MSMEG_0335 MSMEG_0335 enoyl-CoA hydratase/isomerase identified by match to protein family HMM PF00378 A0QPB0 No unknown NC_008596.1 Mycobrowser_v3 CDS 373643 374437 . + 0 MSMEG_0336 MSMEG_0336 conserved hypothetical protein identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03084 A0QPB1 No unknown NC_008596.1 Mycobrowser_v3 CDS 374434 376188 . + 0 MSMEG_0337 MSMEG_0337 conserved hypothetical protein identified by match to protein family HMM PF07287 A0QPB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 525323 525571 . - 0 MSMEG_0451 MSMEG_0451 oxidoreductase, FAD-linked A0QPM6 No unknown NC_008596.1 Mycobrowser_v3 CDS 377377 378393 . + 0 MSMEG_0339 MSMEG_0339 FMN-dependent monooxygenase identified by match to protein family HMM PF00296 A0QPB4 No unknown NC_008596.1 Mycobrowser_v3 CDS 392616 392957 . + 0 MSMEG_0354 MSMEG_0354 conserved hypothetical protein identified by match to protein family HMM PF05305 A0QPC9 No unknown Rv1974 Rv1974 NC_008596.1 Mycobrowser_v3 CDS 378402 379154 . + 0 MSMEG_0340 MSMEG_0340 enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 A0QPB5 No unknown NC_008596.1 Mycobrowser_v3 CDS 379158 380174 . - 0 MSMEG_0341 MSMEG_0341 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QPB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 436310 437044 . + 0 MSMEG_0387 MSMEG_0387 Rmt2 protein A0QPG2,Q2YHI2 No unknown NC_008596.1 Mycobrowser_v3 CDS 504399 504641 . - 0 MSMEG_0429 MSMEG_0429 putative ferric uptake regulator A0QPK4 No unknown NC_008596.1 Mycobrowser_v3 CDS 382881 383699 . + 0 MSMEG_0345 MSMEG_0345 conserved hypothetical protein identified by match to protein family HMM PF02405 A0QPC0 No unknown Rv1965 Rv1965 NC_008596.1 Mycobrowser_v3 CDS 383703 385127 . + 0 MSMEG_0346 MSMEG_0346 virulence factor identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QPC1 No unknown Rv1966 Rv1966 NC_008596.1 Mycobrowser_v3 CDS 385157 386185 . + 0 MSMEG_0347 MSMEG_0347 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QPC2 No unknown Rv1967 Rv1967 NC_008596.1 Mycobrowser_v3 CDS 386170 387498 . + 0 MSMEG_0348 MSMEG_0348 mce-family protein mce3c identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QPC3 No unknown Rv1968 Rv1968 NC_008596.1 Mycobrowser_v3 CDS 387495 388796 . + 0 MSMEG_0349 MSMEG_0349 virulence factor mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QPC4 No unknown Rv1969 Rv1969 NC_008596.1 Mycobrowser_v3 CDS 388793 389932 . + 0 MSMEG_0350 MSMEG_0350 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QPC5 No unknown Rv1970 Rv1970 NC_008596.1 Mycobrowser_v3 CDS 389934 391421 . + 0 MSMEG_0351 MSMEG_0351 virulence factor mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QPC6 No unknown Rv1971 Rv1971 NC_008596.1 Mycobrowser_v3 CDS 2380379 2380618 . + 0 MSMEG_2297 MSMEG_2297 glutaredoxin identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194 A0QR80 No unknown Rv3053c Rv3053c NC_008596.1 Mycobrowser_v3 CDS 392047 392592 . + 0 MSMEG_0353 MSMEG_0353 conserved hypothetical protein A0QPC8 No unknown Rv1973 Rv1973 NC_008596.1 Mycobrowser_v3 CDS 424350 424631 . + 0 MSMEG_0379 MSMEG_0379 nitrile hydratase activator P14k A0QPF4 No unknown NC_008596.1 Mycobrowser_v3 CDS 392954 393448 . + 0 MSMEG_0355 MSMEG_0355 conserved hypothetical protein A0QPD0 No unknown Rv1975 Rv1975 NC_008596.1 Mycobrowser_v3 CDS 393601 393897 . - 0 MSMEG_0356 MSMEG_0356 acetyltransferase A0QPD1 No unknown NC_008596.1 Mycobrowser_v3 CDS 394013 395614 . + 0 MSMEG_0357 MSMEG_0357 transmembrane transport protein identified by match to protein family HMM PF05977; match to protein family HMM PF07690 A0QPD2 No unknown NC_008596.1 Mycobrowser_v3 CDS 395654 396616 . + 0 MSMEG_0358 MSMEG_0358 ribonucleoside-diphosphate reductase, beta subunit identified by match to protein family HMM PF00268 A0QPD3 No unknown Rv0233 Rv0233 NC_008596.1 Mycobrowser_v3 CDS 447638 447868 . + 0 MSMEG_0399 MSMEG_0399 conserved domain protein identified by match to protein family HMM PF03621 Q3L893 No unknown Rv2377c Rv2377c NC_008596.1 Mycobrowser_v3 CDS 396891 401135 . - 0 MSMEG_0359 MSMEG_0359 conserved hypothetical protein A0QPD4 No unknown Rv0236c Rv0236c NC_008596.1 Mycobrowser_v3 CDS 401170 401343 . - 0 MSMEG_0360 MSMEG_0360 conserved hypothetical protein A0QPD5 No unknown Rv0236A Rv0236A NC_008596.1 Mycobrowser_v3 CDS 401448 402611 . + 0 MSMEG_0361 MSMEG_0361 Glycosyl hydrolase family protein 3 identified by match to protein family HMM PF00933 A0QPD6 No unknown Rv0237 Rv0237 NC_008596.1 Mycobrowser_v3 CDS 402623 403786 . - 0 MSMEG_0362 MSMEG_0362 amidohydrolase 2 identified by match to protein family HMM PF04909 A0QPD7 No unknown Rv1879 Rv1879 NC_008596.1 Mycobrowser_v3 CDS 403864 404502 . + 0 MSMEG_0363 MSMEG_0363 TetR-family protein regulatory protein identified by match to protein family HMM PF00440 A0QPD8 No unknown Rv0238 Rv0238 NC_008596.1 Mycobrowser_v3 CDS 404569 404868 . + 0 MSMEG_0364 MSMEG_0364 hypothetical protein identified by Glimmer2; putative A0QPD9 No unknown NC_008596.1 Mycobrowser_v3 CDS 404871 406751 . + 0 MSMEG_0365 MSMEG_0365 conserved hypothetical protein identified by match to protein family HMM PF06259 A0QPE0 No unknown NC_008596.1 Mycobrowser_v3 CDS 406748 407275 . + 0 MSMEG_0366 MSMEG_0366 hypothetical protein identified by Glimmer2; putative A0QPE1 No unknown NC_008596.1 Mycobrowser_v3 CDS 927850 928140 . - 0 MSMEG_0844 MSMEG_0844 multiple resistance and pH regulation protein F identified by match to protein family HMM PF04066 A0QQQ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 407282 408355 . - 0 MSMEG_0367 MSMEG_0367 O-demethylpuromycin-O-methyltransferase identified by match to protein family HMM PF00891 A0QPE2 No unknown NC_008596.1 Mycobrowser_v3 CDS 408516 409982 . + 0 MSMEG_0368 MSMEG_0368 hypothetical protein identified by Glimmer2; putative A0QPE3 No unknown NC_008596.1 Mycobrowser_v3 CDS 409979 410701 . + 0 MSMEG_0369 MSMEG_0369 hypothetical protein identified by Glimmer2; putative A0QPE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 434928 436061 . + 0 MSMEG_0386 MSMEG_0386 NAD dependent epimerase/dehydratase family protein identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993 A0QPG1 No unknown NC_008596.1 Mycobrowser_v3 CDS 410691 414047 . + 0 MSMEG_0370 MSMEG_0370 conserved hypothetical protein A0QPE5 No unknown NC_008596.1 Mycobrowser_v3 CDS 414063 414920 . - 0 MSMEG_0371 MSMEG_0371 MaoC like domain protein identified by match to protein family HMM PF01575 A0QPE6 No unknown Rv0241c Rv0241c NC_008596.1 Mycobrowser_v3 CDS 414922 416274 . - 0 MSMEG_0372 MSMEG_0372 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QPE7 No unknown Rv0242c Rv0242c NC_008596.1 Mycobrowser_v3 CDS 416355 417653 . + 0 MSMEG_0373 MSMEG_0373 3-ketoacyl-CoA thiolase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0QPE8 No unknown Rv0243 Rv0243 NC_008596.1 Mycobrowser_v3 CDS 418197 420065 . - 0 MSMEG_0374 MSMEG_0374 glycolate oxidase subunit identified by match to protein family HMM PF01565; match to protein family HMM PF02913 A0QPE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 420213 421805 . - 0 MSMEG_0375 MSMEG_0375 phospholipase D family protein identified by match to protein family HMM PF00614 A0QPF0 No unknown NC_008596.1 Mycobrowser_v3 CDS 421882 422928 . + 0 MSMEG_0376 MSMEG_0376 transcriptional regulator, AraC family protein identified by match to protein family HMM PF00165; match to protein family HMM PF01965 A0QPF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 422996 423736 . + 0 MSMEG_0377 MSMEG_0377 nitrile hydratase A0QPF2 No unknown NC_008596.1 Mycobrowser_v3 CDS 928137 928676 . - 0 MSMEG_0845 MSMEG_0845 multisubunit Na+/H+ antiporter A0QQR0 No unknown NC_008596.1 Mycobrowser_v3 CDS 423733 424353 . + 0 MSMEG_0378 nthA nitrile hydratase, alpha subunit identified by match to protein family HMM PF02979; match to protein family HMM TIGR01323 A0QPF3 No unknown NC_008596.1 Mycobrowser_v3 CDS 425344 425763 . + 0 MSMEG_0380 MSMEG_0380 MmpS4 protein identified by match to protein family HMM PF05423 Q2YHI9 No unknown Rv0451c Rv0451c NC_008596.1 Mycobrowser_v3 CDS 431707 432045 . - 0 MSMEG_0383 MSMEG_0383 conserved hypothetical protein Q2YHI6 No unknown NC_008596.1 Mycobrowser_v3 CDS 447897 455186 . + 0 MSMEG_0400 MSMEG_0400 peptide synthetase identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733 A0QPH5 No unknown NC_008596.1 Mycobrowser_v3 CDS 433614 434870 . + 0 MSMEG_0385 MSMEG_0385 putative glycosyl transferase identified by match to protein family HMM PF03033 A0QPG0 No unknown Rv1524 Rv1524 NC_008596.1 Mycobrowser_v3 CDS 437374 438096 . + 0 MSMEG_0388 tylF Macrocin-O-methyltransferase identified by match to protein family HMM PF05711 A0QPG3 No unknown NC_008596.1 Mycobrowser_v3 CDS 439605 440687 . + 0 MSMEG_0390 MSMEG_0390 putative acyltransferase identified by match to protein family HMM PF01757 A0QPG5 No unknown NC_008596.1 Mycobrowser_v3 CDS 440861 441649 . + 0 MSMEG_0391 MSMEG_0391 Rmt3 protein A0QPG6,Q2YHH8 No unknown NC_008596.1 Mycobrowser_v3 CDS 441687 443201 . - 0 MSMEG_0392 MSMEG_0392 putative glycosyl transferase identified by match to protein family HMM PF03033 A0QPG7 No unknown NC_008596.1 Mycobrowser_v3 CDS 428652 431636 . + 0 MSMEG_0382 mmpL4b putative transport protein identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833 A0QPF7 No unknown Rv0450c Rv0450c NC_008596.1 Mycobrowser_v3 CDS 438130 439398 . + 0 MSMEG_0389 gtf1 putative glycosyl transferase identified by match to protein family HMM PF03033 A0QPG4 No unknown NC_008596.1 Mycobrowser_v3 CDS 432229 433095 . - 0 MSMEG_0384 rfbA glucose-1-phosphate thymidylyltransferase identified by match to protein family HMM PF00483; match to protein family HMM TIGR01207 A0QPF9 No unknown Rv0334 Rv0334 NC_008596.1 Mycobrowser_v3 CDS 3752918 3753229 . - 0 MSMEG_3688 MSMEG_3688 conserved hypothetical protein A0QYK3 No unknown NC_008596.1 Mycobrowser_v3 CDS 443164 443967 . + 0 MSMEG_0393 MSMEG_0393 Fmt protein A0QPG8,Q9RMN9 No unknown Rv2952 Rv2952 NC_008596.1 Mycobrowser_v3 CDS 444075 444329 . + 0 MSMEG_0394 MSMEG_0394 hypothetical protein identified by Glimmer2; putative A0QPG9 No unknown NC_008596.1 Mycobrowser_v3 CDS 445187 445585 . - 0 MSMEG_0396 MSMEG_0396 hypothetical protein identified by Glimmer2; putative A0QPH1 No unknown NC_008596.1 Mycobrowser_v3 CDS 445304 446626 . + 0 MSMEG_0397 MSMEG_0397 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 446634 447335 . - 0 MSMEG_0398 MSMEG_0398 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 455186 458191 . + 0 MSMEG_0401 MSMEG_0401 putative non-ribosomal peptide synthase identified by match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720 A0QPH6 No unknown NC_008596.1 Mycobrowser_v3 CDS 465884 466702 . + 0 MSMEG_0403 MSMEG_0403 integral membrane protein Q3L890 No unknown NC_008596.1 Mycobrowser_v3 CDS 466804 467214 . + 0 MSMEG_0404 MSMEG_0404 sigma associated protein identified by match to protein family HMM PF04946 Q3L889 No unknown NC_008596.1 Mycobrowser_v3 CDS 467223 468398 . + 0 MSMEG_0405 MSMEG_0405 extra cytoplasmic sigma factor identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937 Q3L888 No unknown NC_008596.1 Mycobrowser_v3 CDS 468441 470276 . - 0 MSMEG_0406 MSMEG_0406 acyl-coA-dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 Q3L887 No unknown Rv0244c Rv0244c NC_008596.1 Mycobrowser_v3 CDS 470514 471602 . + 0 MSMEG_0407 MSMEG_0407 conserved hypothetical protein identified by match to protein family HMM PF01113 Q3L886 No unknown NC_008596.1 Mycobrowser_v3 CDS 482813 484234 . + 0 MSMEG_0409 MSMEG_0409 Condensation domain protein identified by match to protein family HMM PF00668 A0QPI4 No unknown Rv1182 Rv1182 NC_008596.1 Mycobrowser_v3 CDS 484268 487276 . + 0 MSMEG_0410 MSMEG_0410 MmpL protein identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833 Q2M5K4 No unknown Rv1183 Rv1183 NC_008596.1 Mycobrowser_v3 CDS 487386 489095 . + 0 MSMEG_0411 MSMEG_0411 acyl-CoA synthase identified by match to protein family HMM PF00501 Q2M5K3 No unknown NC_008596.1 Mycobrowser_v3 CDS 489157 490308 . + 0 MSMEG_0412 MSMEG_0412 conserved hypothetical protein Q2M5K2 No unknown Rv1184c Rv1184c NC_008596.1 Mycobrowser_v3 CDS 490313 490990 . - 0 MSMEG_0413 MSMEG_0413 conserved hypothetical protein A0QPI8 No unknown Rv3821 Rv3821 NC_008596.1 Mycobrowser_v3 CDS 491026 492051 . + 0 MSMEG_0414 MSMEG_0414 oxidoreductase, 2OG-Fe(II) oxygenase family protein identified by match to protein family HMM PF03171 A0QPI9 No unknown NC_008596.1 Mycobrowser_v3 CDS 492065 492550 . + 0 MSMEG_0415 MSMEG_0415 NADH-fmn oxidoreductase identified by match to protein family HMM PF01613 A0QPJ0 No unknown Rv0245 Rv0245 NC_008596.1 Mycobrowser_v3 CDS 492595 492756 . - 0 MSMEG_0416 MSMEG_0416 hypothetical protein identified by Glimmer2; putative A0QPJ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 492834 493583 . - 0 MSMEG_0417 MSMEG_0417 succinate dehydrogenase identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384 A0QPJ2 No unknown Rv0247c Rv0247c NC_008596.1 Mycobrowser_v3 CDS 493585 495492 . - 0 MSMEG_0418 MSMEG_0418 succinate dehydrogenase flavoprotein subunit identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM PF07992 A0QPJ3 No unknown Rv0248c Rv0248c NC_008596.1 Mycobrowser_v3 CDS 495575 496396 . - 0 MSMEG_0419 MSMEG_0419 integral membrane protein A0QPJ4 No unknown Rv0249c Rv0249c NC_008596.1 Mycobrowser_v3 CDS 496449 496745 . - 0 MSMEG_0420 MSMEG_0420 conserved hypothetical protein A0QPJ5 No unknown Rv0250c Rv0250c NC_008596.1 Mycobrowser_v3 CDS 496794 496940 . + 0 MSMEG_0421 MSMEG_0421 hypothetical protein identified by Glimmer2; putative A0QPJ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 497010 497777 . + 0 MSMEG_0422 MSMEG_0422 transferase A0QPJ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 497860 498360 . + 0 MSMEG_0423 MSMEG_0423 conserved hypothetical protein A0QPJ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 498438 498875 . - 0 MSMEG_0424 MSMEG_0424 Hsp20/alpha crystallin family protein identified by match to protein family HMM PF00011 A0QPJ9 No unknown Rv0251c Rv0251c NC_008596.1 Mycobrowser_v3 CDS 574846 575205 . - 0 MSMEG_0496 MSMEG_0496 coenzyme B12-dependent glycerol dehydrogenase small subunit A0QPS0 No unknown NC_008596.1 Mycobrowser_v3 CDS 498953 499888 . - 0 MSMEG_0425 MSMEG_0425 putative membrane protein DcsA identified by match to protein family HMM PF00892 A0QPK0 No unknown NC_008596.1 Mycobrowser_v3 CDS 499923 501296 . + 0 MSMEG_0426 MSMEG_0426 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00155; match to protein family HMM PF00392 A0QPK1 No unknown NC_008596.1 Mycobrowser_v3 CDS 501440 504019 . + 0 MSMEG_0427 nirB nitrite reductase [NAD(P)H], large subunit identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374 A0QPK2 No unknown Rv0252 Rv0252 NC_008596.1 Mycobrowser_v3 CDS 505025 506392 . + 0 MSMEG_0430 MSMEG_0430 ISMsm4, transposase identified by similarity to GP:150005; match to protein family HMM PF01610 A0QPK5 No unknown NC_008596.1 Mycobrowser_v3 CDS 506807 507502 . - 0 MSMEG_0431 MSMEG_0431 secreted protein identified by match to protein family HMM PF01903 A0QPK6 No unknown Rv0259c Rv0259c NC_008596.1 Mycobrowser_v3 CDS 507499 508656 . - 0 MSMEG_0432 MSMEG_0432 uroporphyrinogen-III synthetase identified by match to protein family HMM PF00486; match to protein family HMM PF02602 A0QPK7 No unknown Rv0260c Rv0260c NC_008596.1 Mycobrowser_v3 CDS 508691 510100 . - 0 MSMEG_0433 MSMEG_0433 nitrite extrusion protein identified by match to protein family HMM PF07690 A0QPK8 No unknown Rv0261c Rv0261c NC_008596.1 Mycobrowser_v3 CDS 510209 510841 . - 0 MSMEG_0434 MSMEG_0434 aminoglycoside 2'-N-acetyltransferase (AAC(2')-Id) identified by match to protein family HMM PF00583 P94968 No unknown Rv0262c Rv0262c NC_008596.1 Mycobrowser_v3 CDS 510873 511757 . - 0 MSMEG_0435 MSMEG_0435 allophanate hydrolase subunit 2 identified by match to protein family HMM PF02626; match to protein family HMM TIGR00724 A0QPL0 No unknown Rv0263c Rv0263c NC_008596.1 Mycobrowser_v3 CDS 511773 512405 . - 0 MSMEG_0436 MSMEG_0436 allophanate hydrolase subunit 1 identified by match to protein family HMM PF02682 A0QPL1 No unknown Rv0264c Rv0264c NC_008596.1 Mycobrowser_v3 CDS 512510 513190 . - 0 MSMEG_0437 MSMEG_0437 conserved hypothetical integral membrane protein identified by match to protein family HMM PF02592; match to protein family HMM TIGR00697 A0QPL2 No unknown NC_008596.1 Mycobrowser_v3 CDS 543024 543872 . + 0 MSMEG_0466 MSMEG_0466 hypothetical protein identified by Glimmer2; putative A0QPP1 No unknown NC_008596.1 Mycobrowser_v3 CDS 513215 514168 . - 0 MSMEG_0438 MSMEG_0438 Periplasmic binding protein identified by match to protein family HMM PF01497 A0QPL3 No unknown Rv0265c Rv0265c NC_008596.1 Mycobrowser_v3 CDS 514184 515320 . - 0 MSMEG_0439 MSMEG_0439 conserved hypothetical protein identified by match to protein family HMM PF03601 A0QPL4 No unknown NC_008596.1 Mycobrowser_v3 CDS 515317 515415 . - 0 MSMEG_0440 MSMEG_0440 hypothetical protein identified by Glimmer2; putative A0QPL5 No unknown NC_008596.1 Mycobrowser_v3 CDS 515471 516199 . - 0 MSMEG_0441 MSMEG_0441 conserved hypothetical protein, putative identified by match to protein family HMM TIGR03083 A0QPL6 No unknown NC_008596.1 Mycobrowser_v3 CDS 516209 516811 . - 0 MSMEG_0442 MSMEG_0442 tetracyclin repressor, C- all-alpha domain protein identified by match to protein family HMM PF02909 A0QPL7 No unknown NC_008596.1 Mycobrowser_v3 CDS 516901 517893 . + 0 MSMEG_0443 MSMEG_0443 hydrolase, carbon-nitrogen family protein identified by match to protein family HMM PF00795 A0QPL8 No unknown NC_008596.1 Mycobrowser_v3 CDS 517901 518923 . + 0 MSMEG_0444 MSMEG_0444 agmatine deiminase identified by match to protein family HMM PF04371 A0QPL9 No unknown NC_008596.1 Mycobrowser_v3 CDS 518920 520557 . + 0 MSMEG_0445 MSMEG_0445 amidohydrolase family protein identified by match to protein family HMM PF07969 A0QPM0 No unknown NC_008596.1 Mycobrowser_v3 CDS 520569 521912 . + 0 MSMEG_0446 MSMEG_0446 putrescine importer identified by match to protein family HMM PF00324 A0QPM1 No unknown NC_008596.1 Mycobrowser_v3 CDS 521987 522406 . - 0 MSMEG_0447 MSMEG_0447 conserved hypothetical protein identified by match to protein family HMM PF02566 A0QPM2 No unknown NC_008596.1 Mycobrowser_v3 CDS 522533 522976 . + 0 MSMEG_0448 MSMEG_0448 transcriptional regulator, MarR family protein identified by match to protein family HMM PF01047 A0QPM3 No unknown NC_008596.1 Mycobrowser_v3 CDS 522988 524988 . - 0 MSMEG_0449 MSMEG_0449 transporter, major facilitator family protein, putative identified by match to protein family HMM PF00582; match to protein family HMM PF07690 A0QPM4 No unknown NC_008596.1 Mycobrowser_v3 CDS 525004 525219 . + 0 MSMEG_0450 MSMEG_0450 hypothetical protein identified by Glimmer2; putative A0QPM5 No unknown NC_008596.1 Mycobrowser_v3 CDS 525610 527055 . - 0 MSMEG_0452 MSMEG_0452 inner membrane permease YgbN identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791 A0QPM7 No unknown NC_008596.1 Mycobrowser_v3 CDS 527092 527604 . - 0 MSMEG_0453 aroK shikimate kinase identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313 A0QPM8 No unknown NC_008596.1 Mycobrowser_v3 CDS 527730 528464 . + 0 MSMEG_0454 MSMEG_0454 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QPM9 No unknown NC_008596.1 Mycobrowser_v3 CDS 528536 529963 . + 0 MSMEG_0455 MSMEG_0455 aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0QPN0 No unknown NC_008596.1 Mycobrowser_v3 CDS 529995 532136 . - 0 MSMEG_0456 MSMEG_0456 DNA gyrase subunit A identified by match to protein family HMM PF00521; match to protein family HMM PF03989 A0QPN1 No unknown NC_008596.1 Mycobrowser_v3 CDS 545434 546294 . - 0 MSMEG_0468 MSMEG_0468 integral membrane protein identified by match to protein family HMM PF00892 A0QPP4 No unknown NC_008596.1 Mycobrowser_v3 CDS 547268 548872 . - 0 MSMEG_0470 MSMEG_0470 para-nitrobenzyl esterase identified by match to protein family HMM PF00135 A0QPP6 No unknown NC_008596.1 Mycobrowser_v3 CDS 532147 534180 . - 0 MSMEG_0457 MSMEG_0457 DNA topoisomerase IV subunit B identified by match to protein family HMM PF00986; match to protein family HMM PF02518 A0QPN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 534392 535687 . + 0 MSMEG_0458 MSMEG_0458 two-component system sensor kinase identified by match to protein family HMM PF02518; match to protein family HMM PF07730 A0QPN3 No unknown NC_008596.1 Mycobrowser_v3 CDS 535697 536341 . + 0 MSMEG_0459 MSMEG_0459 two-component system response regulator identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0QPN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 536353 537297 . - 0 MSMEG_0460 MSMEG_0460 alpha/beta hydrolase fold identified by match to protein family HMM PF00561 A0QPN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 537351 537965 . + 0 MSMEG_0461 MSMEG_0461 CinZ protein identified by match to protein family HMM PF01205 A0QPN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 538102 538545 . + 0 MSMEG_0462 MSMEG_0462 MmpS4 protein identified by match to protein family HMM PF05423 A0QPN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 538542 541427 . + 0 MSMEG_0463 MSMEG_0463 MmpL4 protein identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833 A0QPN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 541484 542098 . + 0 MSMEG_0465 MSMEG_0465 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QPN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 542092 542898 . - 0 MSMEG_0464 MSMEG_0464 phosphomethylpyrimidine kinase A0QPP0 No unknown NC_008596.1 Mycobrowser_v3 CDS 573002 573169 . - 0 MSMEG_0494 MSMEG_0494 hypothetical protein identified by Glimmer2; putative A0QPR9 No unknown NC_008596.1 Mycobrowser_v3 CDS 543882 544481 . - 0 MSMEG_0467 MSMEG_0467 membrane transport protein identified by match to protein family HMM PF01810; match to protein family HMM TIGR00948 A0QPP2 No unknown Rv1986 Rv1986 NC_008596.1 Mycobrowser_v3 CDS 544595 545467 . + 0 MSMEG_0469 MSMEG_0469 transcriptional regulatory protein PadR identified by match to protein family HMM PF00583; match to protein family HMM PF01047 A0QPP3 No unknown NC_008596.1 Mycobrowser_v3 CDS 577603 577719 . - 0 MSMEG_0498 MSMEG_0498 hypothetical protein identified by Glimmer2; putative A0QPS2 No unknown NC_008596.1 Mycobrowser_v3 CDS 546423 547280 . + 0 MSMEG_0471 MSMEG_0471 transcriptional regulator LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QPP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 548983 549768 . - 0 MSMEG_0472 MSMEG_0472 putative lipoprotein A0QPP7 No unknown NC_008596.1 Mycobrowser_v3 CDS 550350 551168 . + 0 MSMEG_0473 MSMEG_0473 transcriptional regulator, LuxR family protein identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0QPP8 No unknown NC_008596.1 Mycobrowser_v3 CDS 551334 553121 . + 0 MSMEG_0474 MSMEG_0474 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) identified by match to protein family HMM PF00310; match to protein family HMM PF01380 A0QPP9 No unknown NC_008596.1 Mycobrowser_v3 CDS 553181 554419 . + 0 MSMEG_0475 MSMEG_0475 nucleotide-sugar dehydrogenase identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 A0QPQ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 554422 555717 . + 0 MSMEG_0476 MSMEG_0476 chitin synthase identified by match to protein family HMM PF00535; match to protein family HMM PF03142 A0QPQ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 570034 570816 . + 0 MSMEG_0490 MSMEG_0490 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QPR5 No unknown NC_008596.1 Mycobrowser_v3 CDS 555747 557249 . + 0 MSMEG_0478 MSMEG_0478 secreted protein, putative identified by match to protein family HMM PF01522 A0QPQ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 557246 557977 . - 0 MSMEG_0477 MSMEG_0477 hypothetical protein identified by Glimmer2; putative A0QPQ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3261518 3263795 . - 0 MSMEG_3185 MSMEG_3185 maltooligosyl trehalose synthase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00128 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 557252 557959 . + 0 MSMEG_0479 MSMEG_0479 hypothetical protein identified by Glimmer2; putative A0QPQ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 557995 558654 . - 0 MSMEG_0480 MSMEG_0480 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QPQ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 558749 560095 . + 0 MSMEG_0481 MSMEG_0481 FAD dependent oxidoreductase identified by match to protein family HMM PF01266 A0QPQ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 617579 618070 . - 0 MSMEG_0538 MSMEG_0538 regulatory protein, MarR identified by match to protein family HMM PF01047 A0QPW1 No unknown NC_008596.1 Mycobrowser_v3 CDS 560092 561786 . + 0 MSMEG_0482 MSMEG_0482 dihydroxy-acid dehydratase identified by match to protein family HMM PF00920 A0QPQ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 580361 581107 . - 0 MSMEG_0501 MSMEG_0501 glucosamine-6-phosphate deaminase 1 identified by match to protein family HMM PF01182 A0QPS5 No unknown NC_008596.1 Mycobrowser_v3 CDS 561813 563186 . + 0 MSMEG_0483 MSMEG_0483 shikimate transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QPQ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 563191 564300 . - 0 MSMEG_0484 MSMEG_0484 formamidase identified by match to protein family HMM PF03069 A0QPQ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 564297 565826 . - 0 MSMEG_0485 MSMEG_0485 amidase identified by match to protein family HMM PF01425 A0QPR0 No unknown NC_008596.1 Mycobrowser_v3 CDS 565863 566894 . - 0 MSMEG_0486 MSMEG_0486 putative ABC transporter, periplasmic protein A0QPR1 No unknown NC_008596.1 Mycobrowser_v3 CDS 566907 567740 . - 0 MSMEG_0487 MSMEG_0487 ABC transporter permease identified by match to protein family HMM PF00528 A0QPR2 No unknown NC_008596.1 Mycobrowser_v3 CDS 567784 568551 . - 0 MSMEG_0488 MSMEG_0488 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0QPR3 No unknown NC_008596.1 Mycobrowser_v3 CDS 568865 570037 . + 0 MSMEG_0489 MSMEG_0489 racemase identified by match to protein family HMM PF02515 A0QPR4 No unknown NC_008596.1 Mycobrowser_v3 CDS 601925 602077 . + 0 MSMEG_0522 MSMEG_0522 pp24 protein A0QPU5 No unknown NC_008596.1 Mycobrowser_v3 CDS 570847 571875 . - 0 MSMEG_0491 MSMEG_0491 transcriptional regulator, LacI family protein identified by match to protein family HMM PF00356; match to protein family HMM PF00532 A0QPR6 No unknown NC_008596.1 Mycobrowser_v3 CDS 571918 572553 . - 0 MSMEG_0492 MSMEG_0492 conserved hypothetical protein A0QPR7 No unknown NC_008596.1 Mycobrowser_v3 CDS 572636 572803 . - 0 MSMEG_0493 MSMEG_0493 hypothetical protein identified by Glimmer2; putative A0QPR8 No unknown NC_008596.1 Mycobrowser_v3 CDS 575202 577466 . - 0 MSMEG_0497 MSMEG_0497 glycerol dehydratase large subunit identified by match to protein family HMM PF02286 A0QPS1 No unknown NC_008596.1 Mycobrowser_v3 CDS 577723 579150 . + 0 MSMEG_0499 MSMEG_0499 amino acid permease-associated region identified by match to protein family HMM PF00324 A0QPS3 No unknown NC_008596.1 Mycobrowser_v3 CDS 579284 580351 . + 0 MSMEG_0500 MSMEG_0500 regulator of polyketide synthase expression, putative identified by match to protein family HMM PF07905 A0QPS4 No unknown NC_008596.1 Mycobrowser_v3 CDS 581104 582480 . - 0 MSMEG_0502 MSMEG_0502 glucosidase identified by match to protein family HMM PF02056 A0QPS6 No unknown NC_008596.1 Mycobrowser_v3 CDS 582477 583253 . - 0 MSMEG_0503 MSMEG_0503 DeoR-family protein transcriptional regulator identified by match to protein family HMM PF00455; match to protein family HMM PF08220 A0QPS7 No unknown NC_008596.1 Mycobrowser_v3 CDS 583427 584413 . + 0 MSMEG_0504 MSMEG_0504 carbohydrate kinase identified by match to protein family HMM PF00294 A0QPS8 No unknown NC_008596.1 Mycobrowser_v3 CDS 584410 585780 . + 0 MSMEG_0505 MSMEG_0505 probable sugar ABC transporter, substrate-binding protein, putative identified by match to protein family HMM PF01547 A0QPS9 No unknown NC_008596.1 Mycobrowser_v3 CDS 585885 586739 . + 0 MSMEG_0506 MSMEG_0506 ABC transporter, permease protein identified by match to protein family HMM PF00528 A0QPT0 No unknown NC_008596.1 Mycobrowser_v3 CDS 586736 587560 . + 0 MSMEG_0507 MSMEG_0507 probable sugar ABC transporter, permease protein identified by match to protein family HMM PF00528 A0QPT1 No unknown NC_008596.1 Mycobrowser_v3 CDS 587587 588657 . + 0 MSMEG_0508 MSMEG_0508 glycerol-phosphate porter identified by match to protein family HMM PF00005; match to protein family HMM PF03459 A0QPT2 No unknown Rv2038c,Rv2832c Rv2038c,Rv2832c NC_008596.1 Mycobrowser_v3 CDS 588742 589527 . - 0 MSMEG_0509 MSMEG_0509 transcriptional regulatory protein identified by match to protein family HMM PF00455; match to protein family HMM PF01022; match to protein family HMM PF08220 A0QPT3 No unknown NC_008596.1 Mycobrowser_v3 CDS 674388 674783 . + 0 MSMEG_0598 MSMEG_0598 hypothetical protein identified by Glimmer2; putative A0QQ20 No unknown NC_008596.1 Mycobrowser_v3 CDS 589666 590988 . + 0 MSMEG_0510 MSMEG_0510 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit identified by match to protein family HMM PF08013; match to protein family HMM TIGR02810 A0QPT4 No unknown NC_008596.1 Mycobrowser_v3 CDS 590985 592127 . + 0 MSMEG_0511 MSMEG_0511 putative sugar isomerase, AgaS family protein identified by match to protein family HMM PF01380 A0QPT5,A4ZHU2 No unknown NC_008596.1 Mycobrowser_v3 CDS 592124 593104 . + 0 MSMEG_0512 MSMEG_0512 BadF/BadG/BcrA/BcrD ATPase family protein identified by match to protein family HMM PF01869 A0QPT6 No unknown NC_008596.1 Mycobrowser_v3 CDS 593126 594091 . + 0 MSMEG_0513 MSMEG_0513 integral membrane protein identified by match to protein family HMM PF00892 A0QPT7 No unknown NC_008596.1 Mycobrowser_v3 CDS 621750 622790 . - 0 MSMEG_0543 MSMEG_0543 conserved hypothetical protein A0QPW7 No unknown NC_008596.1 Mycobrowser_v3 CDS 594088 595401 . + 0 MSMEG_0514 MSMEG_0514 alpha-galactosidase identified by match to protein family HMM PF02056 A0QPT8 No unknown NC_008596.1 Mycobrowser_v3 CDS 595444 596721 . + 0 MSMEG_0515 MSMEG_0515 probable sugar transporter sugar binding lipoprotein identified by match to protein family HMM PF01547 A0QPT9 No unknown NC_008596.1 Mycobrowser_v3 CDS 596736 597647 . + 0 MSMEG_0516 MSMEG_0516 sugar transport system identified by match to protein family HMM PF00528 A0QPU0 No unknown NC_008596.1 Mycobrowser_v3 CDS 597644 598570 . + 0 MSMEG_0517 MSMEG_0517 sugar binding-protein dependent transporter system permease identified by match to protein family HMM PF00528 A0QPU1 No unknown NC_008596.1 Mycobrowser_v3 CDS 598612 599718 . + 0 MSMEG_0518 MSMEG_0518 ABC transporter, nucleotide binding/ATPase protein, sn-Glycerol-3-phosphate identified by match to protein family HMM PF00005 A0QPU2 No unknown NC_008596.1 Mycobrowser_v3 CDS 599806 599922 . + 0 MSMEG_0519 MSMEG_0519 conserved hypothetical protein A0QPU3 No unknown NC_008596.1 Mycobrowser_v3 CDS 600086 600733 . + 0 MSMEG_0520 MSMEG_0520 porin A0QPU4 No unknown NC_008596.1 Mycobrowser_v3 CDS 602113 603006 . - 0 MSMEG_0523 MSMEG_0523 DNA-binding protein A0QPU6 No unknown NC_008596.1 Mycobrowser_v3 CDS 603036 603863 . - 0 MSMEG_0524 MSMEG_0524 short chain dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QPU7 No unknown NC_008596.1 Mycobrowser_v3 CDS 603897 604079 . + 0 MSMEG_0525 MSMEG_0525 hypothetical protein identified by Glimmer2; putative A0QPU8 No unknown NC_008596.1 Mycobrowser_v3 CDS 618144 618818 . - 0 MSMEG_0539 MSMEG_0539 transcriptional regulator, Crp/Fnr family protein identified by match to protein family HMM PF00027; match to protein family HMM PF00325 A0QPW2 No unknown NC_008596.1 Mycobrowser_v3 CDS 604076 605674 . + 0 MSMEG_0526 MSMEG_0526 oxidoreductase, GMC family protein identified by match to protein family HMM PF00732; match to protein family HMM PF05199 A0QPU9 No unknown NC_008596.1 Mycobrowser_v3 CDS 605757 606500 . + 0 MSMEG_0527 MSMEG_0527 2-hydroxycyclohexnecarboxyl-CoA dehydrogenase identified by match to protein family HMM PF00106 A0QPV0 No unknown NC_008596.1 Mycobrowser_v3 CDS 606524 607450 . + 0 MSMEG_0528 MSMEG_0528 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QPV1 No unknown NC_008596.1 Mycobrowser_v3 CDS 622986 623513 . - 0 MSMEG_0545 MSMEG_0545 transcriptional regulator, LuxR family protein A0QPW8 No unknown NC_008596.1 Mycobrowser_v3 CDS 623786 624613 . - 0 MSMEG_0546 MSMEG_0546 conserved hypothetical protein A0QPW9 No unknown NC_008596.1 Mycobrowser_v3 CDS 607494 610940 . - 0 MSMEG_0529 MSMEG_0529 probable serine/threonine-protein kinase PknK identified by match to protein family HMM PF00069; match to protein family HMM PF07721 A0QPV2 No unknown Rv3080c Rv3080c NC_008596.1 Mycobrowser_v3 CDS 611055 611756 . - 0 MSMEG_0530 MSMEG_0530 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QPV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 611979 613190 . - 0 MSMEG_0531 MSMEG_0531 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QPV4 No unknown NC_008596.1 Mycobrowser_v3 CDS 613219 613836 . - 0 MSMEG_0532 MSMEG_0532 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QPV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 613901 614440 . - 0 MSMEG_0533 MSMEG_0533 gp236 protein A0QPV6 No unknown NC_008596.1 Mycobrowser_v3 CDS 614551 615804 . - 0 MSMEG_0534 MSMEG_0534 permease, major facilitator family protein identified by match to protein family HMM PF07690 A0QPV7 No unknown NC_008596.1 Mycobrowser_v3 CDS 615801 616439 . - 0 MSMEG_0535 MSMEG_0535 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QPV8 No unknown NC_008596.1 Mycobrowser_v3 CDS 927500 927853 . - 0 MSMEG_0843 MSMEG_0843 multisubunit Na+/H+ antiporter, G subunit identified by match to protein family HMM PF03334; match to protein family HMM TIGR01300 A0QQQ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 616498 617064 . - 0 MSMEG_0536 MSMEG_0536 intracellular protease, PfpI family protein identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382 A0QPV9 No unknown NC_008596.1 Mycobrowser_v3 CDS 617136 617564 . - 0 MSMEG_0537 MSMEG_0537 conserved hypothetical protein A0QPW0 No unknown NC_008596.1 Mycobrowser_v3 CDS 620809 621762 . + 0 MSMEG_0544 MSMEG_0544 transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QPW6 No unknown Rv2282c Rv2282c NC_008596.1 Mycobrowser_v3 CDS 624722 625600 . + 0 MSMEG_0548 MSMEG_0548 chromosome replication initiation inhibitor protein identified by match to protein family HMM PF00126 A0QPX0 No unknown Rv1985c Rv1985c NC_008596.1 Mycobrowser_v3 CDS 625597 626658 . - 0 MSMEG_0547 MSMEG_0547 ISMsm5, transposase identified by similarity to GB:CAD18826.1 A0QPX1 No unknown NC_008596.1 Mycobrowser_v3 CDS 626702 627430 . - 0 MSMEG_0549 MSMEG_0549 ABC transporter, permease protein identified by match to protein family HMM PF00528 A0QPX2 No unknown NC_008596.1 Mycobrowser_v3 CDS 627472 628440 . - 0 MSMEG_0550 MSMEG_0550 sulfonate binding protein identified by match to protein family HMM TIGR01728 A0QPX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 628489 629271 . - 0 MSMEG_0551 MSMEG_0551 ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit identified by match to protein family HMM PF00005 A0QPX4 No unknown NC_008596.1 Mycobrowser_v3 CDS 629360 629854 . + 0 MSMEG_0552 MSMEG_0552 conserved hypothetical protein identified by match to protein family HMM PF02566 A0QPX5 No unknown NC_008596.1 Mycobrowser_v3 CDS 629922 631274 . + 0 MSMEG_0553 MSMEG_0553 probable sugar ABC transporter, substrate-binding protein, putative identified by match to protein family HMM PF01547 A0QPX6 No unknown NC_008596.1 Mycobrowser_v3 CDS 631271 632140 . + 0 MSMEG_0554 MSMEG_0554 ABC transporter permease protein, putative identified by match to protein family HMM PF00528 A0QPX7 No unknown NC_008596.1 Mycobrowser_v3 CDS 632137 632928 . + 0 MSMEG_0555 MSMEG_0555 ABC transporter permease protein identified by match to protein family HMM PF00528 A0QPX8 No unknown NC_008596.1 Mycobrowser_v3 CDS 632925 633980 . + 0 MSMEG_0556 MSMEG_0556 ABC transporter, nucleotide binding/ATPase protein identified by match to protein family HMM PF00005 A0QPX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 634165 634302 . + 0 MSMEG_0557 MSMEG_0557 hypothetical protein identified by Glimmer2; putative A0QPY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 634299 634826 . + 0 MSMEG_0558 MSMEG_0558 conserved hypothetical protein A0QPY1 No unknown NC_008596.1 Mycobrowser_v3 CDS 634899 635102 . - 0 MSMEG_0559 MSMEG_0559 conserved domain protein identified by match to protein family HMM PF00313 A0QPY2 No unknown NC_008596.1 Mycobrowser_v3 CDS 635220 636284 . - 0 MSMEG_0560 dapB dihydrodipicolinate reductase, N-terminus domain protein identified by match to protein family HMM PF01113 A0QPY3 No unknown NC_008596.1 Mycobrowser_v3 CDS 701553 701840 . + 0 MSMEG_0621 MSMEG_0621 low molecular weight protein antigen 7 A0QQ44 No unknown Rv0288,Rv3019c Rv0288,Rv3019c NC_008596.1 Mycobrowser_v3 CDS 636421 637101 . + 0 MSMEG_0561 MSMEG_0561 putative TetR family protein receptor protein identified by match to protein family HMM PF00440; match to protein family HMM PF02909 A0QPY4 No unknown NC_008596.1 Mycobrowser_v3 CDS 637149 637904 . + 0 MSMEG_0563 MSMEG_0563 hypothetical protein identified by Glimmer2; putative A0QPY5 No unknown NC_008596.1 Mycobrowser_v3 CDS 637893 638879 . - 0 MSMEG_0562 MSMEG_0562 conserved hypothetical protein identified by match to protein family HMM PF05661 A0QPY6 No unknown Rv3092c Rv3092c NC_008596.1 Mycobrowser_v3 CDS 638914 640326 . - 0 MSMEG_0564 MSMEG_0564 xanthine/uracil permease identified by match to protein family HMM PF00860; match to protein family HMM PF00916 A0QPY7 No unknown NC_008596.1 Mycobrowser_v3 CDS 640338 641435 . - 0 MSMEG_0565 MSMEG_0565 putative glycosyl transferases group 1 identified by match to protein family HMM PF00534 A0QPY8 No unknown NC_008596.1 Mycobrowser_v3 CDS 641432 642280 . - 0 MSMEG_0566 MSMEG_0566 aliphatic amidase identified by match to protein family HMM PF00795 A0QPY9 No unknown NC_008596.1 Mycobrowser_v3 CDS 642290 643711 . - 0 MSMEG_0567 MSMEG_0567 selenophosphate synthetase identified by match to protein family HMM PF00583; match to protein family HMM PF02769 A0QPZ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 643711 644760 . - 0 MSMEG_0568 MSMEG_0568 radical SAM domain protein identified by match to protein family HMM PF04055 A0QPZ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 644774 646045 . - 0 MSMEG_0569 MSMEG_0569 flavoprotein involved in K+ transport identified by match to protein family HMM PF07992 A0QPZ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 646042 646338 . - 0 MSMEG_0570 MSMEG_0570 conserved hypothetical protein A0QPZ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 660492 660752 . - 0 MSMEG_0583 MSMEG_0583 probable membrane protein A0QQ06 No unknown Rv0076c Rv0076c NC_008596.1 Mycobrowser_v3 CDS 646331 647233 . - 0 MSMEG_0571 MSMEG_0571 hydrolase, carbon-nitrogen family protein identified by match to protein family HMM PF00795 A0QPZ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 647243 647764 . - 0 MSMEG_0572 MSMEG_0572 conserved hypothetical protein A0QPZ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 648080 648733 . + 0 MSMEG_0574 MSMEG_0574 putative ECF sigma factor RpoE1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QPZ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 648700 649296 . - 0 MSMEG_0573 MSMEG_0573 putative ECF sigma factor RpoE1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QPZ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 663590 664921 . + 0 MSMEG_0588 MSMEG_0588 putative rhamnose tranport protein, MFS family protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QQ11 No unknown NC_008596.1 Mycobrowser_v3 CDS 649975 652866 . + 0 MSMEG_0576 MSMEG_0576 MmpL4 protein identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833 A0QPZ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 652908 654131 . + 0 MSMEG_0577 MSMEG_0577 major facilitator superfamily protein, putative identified by match to protein family HMM PF07690 A0QQ00 No unknown NC_008596.1 Mycobrowser_v3 CDS 654135 655271 . + 0 MSMEG_0578 MSMEG_0578 acyl-CoA dehydrogenase, middle domain protein identified by match to protein family HMM PF02770 A0QQ01 No unknown NC_008596.1 Mycobrowser_v3 CDS 655294 656088 . + 0 MSMEG_0580 MSMEG_0580 conserved hypothetical protein A0QQ02 No unknown NC_008596.1 Mycobrowser_v3 CDS 656078 657565 . - 0 MSMEG_0579 MSMEG_0579 helix-turn-helix, Fis-type identified by match to protein family HMM PF02954; match to protein family HMM PF07905 A0QQ03 No unknown NC_008596.1 Mycobrowser_v3 CDS 685955 686830 . - 0 MSMEG_0609 MSMEG_0609 helix-turn-helix domain protein identified by match to protein family HMM PF01381 A0QQ32 No unknown NC_008596.1 Mycobrowser_v3 CDS 657676 659022 . + 0 MSMEG_0581 gabT 4-aminobutyrate transaminase identified by match to protein family HMM PF00202; match to protein family HMM TIGR00700 A0QQ04 No unknown NC_008596.1 Mycobrowser_v3 CDS 659025 660479 . + 0 MSMEG_0582 MSMEG_0582 succinic semialdehyde dehydrogenase identified by match to protein family HMM PF00171 A0QQ05 No unknown NC_008596.1 Mycobrowser_v3 CDS 660999 662471 . - 0 MSMEG_0584 MSMEG_0584 hypothetical protein identified by Glimmer2; putative A0QQ07 No unknown NC_008596.1 Mycobrowser_v3 CDS 661011 662237 . + 0 MSMEG_0585 MSMEG_0585 L-carnitine dehydratase/bile acid-inducible protein F identified by match to protein family HMM PF02515 A0QQ08 No unknown NC_008596.1 Mycobrowser_v3 CDS 737416 738018 . - 0 MSMEG_0656 MSMEG_0656 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QQ77 No unknown NC_008596.1 Mycobrowser_v3 CDS 664918 666081 . + 0 MSMEG_0589 rhaI L-rhamnose isomerase identified by match to protein family HMM TIGR02635 A0QQ12 No unknown NC_008596.1 Mycobrowser_v3 CDS 666069 668123 . + 0 MSMEG_0590 rhaD rhamnulose-1-phosphate aldolase/alcohol dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF00596; match to protein family HMM TIGR02632 A0QQ13 No unknown NC_008596.1 Mycobrowser_v3 CDS 668184 669641 . + 0 MSMEG_0591 rhaB rhamnulokinase identified by match to protein family HMM PF00370; match to protein family HMM PF02782 A0QQ14 No unknown NC_008596.1 Mycobrowser_v3 CDS 669649 670650 . + 0 MSMEG_0592 MSMEG_0592 putative rhamnose catabolism operon transcriptional regulator identified by match to protein family HMM PF00356; match to protein family HMM PF00532 A0QQ15 No unknown NC_008596.1 Mycobrowser_v3 CDS 670737 671384 . - 0 MSMEG_0593 MSMEG_0593 conserved hypothetical protein identified by match to protein family HMM PF02589 A0QQ16 No unknown NC_008596.1 Mycobrowser_v3 CDS 671348 672817 . - 0 MSMEG_0594 MSMEG_0594 iron-sulfur cluster binding protein identified by match to protein family HMM TIGR00273 A0QQ17 No unknown NC_008596.1 Mycobrowser_v3 CDS 672814 673551 . - 0 MSMEG_0595 MSMEG_0595 glycolate oxidase identified by match to protein family HMM PF02754 A0QQ18 No unknown NC_008596.1 Mycobrowser_v3 CDS 673641 674327 . + 0 MSMEG_0596 MSMEG_0596 bacterial regulatory protein, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QQ19 No unknown NC_008596.1 Mycobrowser_v3 CDS 674780 676060 . - 0 MSMEG_0597 MSMEG_0597 conserved hypothetical protein A0QQ21 No unknown Rv0269c Rv0269c NC_008596.1 Mycobrowser_v3 CDS 676104 677750 . + 0 MSMEG_0599 MSMEG_0599 acyl-CoA synthase identified by match to protein family HMM PF00501 A0QQ22 No unknown Rv0270 Rv0270 NC_008596.1 Mycobrowser_v3 CDS 677821 678603 . + 0 MSMEG_0600 MSMEG_0600 dehydrogenase identified by match to protein family HMM PF00106 A0QQ23 No unknown NC_008596.1 Mycobrowser_v3 CDS 678620 678928 . - 0 MSMEG_0601 MSMEG_0601 conserved hypothetical protein A0QQ24 No unknown NC_008596.1 Mycobrowser_v3 CDS 706433 707632 . - 0 MSMEG_0625 MSMEG_0625 conserved hypothetical protein A0QQ49 No unknown Rv0293c Rv0293c NC_008596.1 Mycobrowser_v3 CDS 679378 681582 . - 0 MSMEG_0603 MSMEG_0603 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0QQ26 No unknown Rv0271c Rv0271c NC_008596.1 Mycobrowser_v3 CDS 681693 682661 . - 0 MSMEG_0604 MSMEG_0604 glyoxylate reductase identified by match to protein family HMM PF00389; match to protein family HMM PF02826 A0QQ27 No unknown Rv0728c Rv0728c NC_008596.1 Mycobrowser_v3 CDS 682652 683758 . - 0 MSMEG_0605 MSMEG_0605 conserved hypothetical protein A0QQ28 No unknown Rv0272c Rv0272c NC_008596.1 Mycobrowser_v3 CDS 683791 684420 . - 0 MSMEG_0606 MSMEG_0606 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QQ29 No unknown Rv0273c Rv0273c NC_008596.1 Mycobrowser_v3 CDS 684535 685134 . + 0 MSMEG_0608 MSMEG_0608 glyoxalase family protein identified by match to protein family HMM PF00903 A0QQ30 No unknown Rv0274 Rv0274 NC_008596.1 Mycobrowser_v3 CDS 685104 685946 . - 0 MSMEG_0607 MSMEG_0607 methyltransferase, putative, family protein identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 A0QQ31 No unknown NC_008596.1 Mycobrowser_v3 CDS 686934 687842 . + 0 MSMEG_0610 MSMEG_0610 beta-lactamase identified by match to protein family HMM PF00753 A0QQ33 No unknown NC_008596.1 Mycobrowser_v3 CDS 687835 689295 . + 0 MSMEG_0611 MSMEG_0611 para-nitrobenzyl esterase identified by match to protein family HMM PF00135 A0QQ34 No unknown NC_008596.1 Mycobrowser_v3 CDS 689301 689912 . - 0 MSMEG_0612 MSMEG_0612 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QQ35 No unknown Rv0275c Rv0275c NC_008596.1 Mycobrowser_v3 CDS 689985 690890 . + 0 MSMEG_0613 MSMEG_0613 conserved hypothetical protein A0QQ36 No unknown Rv0276 Rv0276 NC_008596.1 Mycobrowser_v3 CDS 690921 691814 . + 0 MSMEG_0614 MSMEG_0614 methyltransferase identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 A0QQ37 No unknown Rv0281 Rv0281 NC_008596.1 Mycobrowser_v3 CDS 699291 699602 . + 0 MSMEG_0618 MSMEG_0618 pe family protein identified by match to protein family HMM PF00934 A0QQ41 No unknown Rv0285,Rv1386,Rv3022A Rv0285,Rv1386,Rv3022A NC_008596.1 Mycobrowser_v3 CDS 699604 701175 . + 0 MSMEG_0619 MSMEG_0619 ppe family protein identified by match to protein family HMM PF00823 A0QQ42 No unknown Rv0286 Rv0286 NC_008596.1 Mycobrowser_v3 CDS 707650 709398 . - 0 MSMEG_0627 MSMEG_0627 glycosyl transferase, family protein 39 identified by match to protein family HMM PF02366 A0QQ50 No unknown NC_008596.1 Mycobrowser_v3 CDS 709441 710328 . - 0 MSMEG_0628 MSMEG_0628 amidohydrolase family protein identified by match to protein family HMM PF04909 A0QQ51 No unknown NC_008596.1 Mycobrowser_v3 CDS 710373 711137 . + 0 MSMEG_0629 MSMEG_0629 trans-aconitate 2-methyltransferase A0QQ52 No unknown Rv0294 Rv0294 NC_008596.1 Mycobrowser_v3 CDS 711186 711989 . - 0 MSMEG_0630 MSMEG_0630 conserved hypothetical protein A0QQ53 No unknown Rv0295c Rv0295c NC_008596.1 Mycobrowser_v3 CDS 713531 714025 . - 0 MSMEG_0632 MSMEG_0632 conserved hypothetical protein A0QQ54 No unknown Rv0307c Rv0307c NC_008596.1 Mycobrowser_v3 CDS 714093 714764 . + 0 MSMEG_0634 MSMEG_0634 PAP2 superfamily protein identified by match to protein family HMM PF01569 A0QQ55 No unknown Rv0308 Rv0308 NC_008596.1 Mycobrowser_v3 CDS 714718 716181 . - 0 MSMEG_0633 MSMEG_0633 PAP2 superfamily protein identified by match to protein family HMM PF00781; match to protein family HMM PF01569 A0QQ56 No unknown NC_008596.1 Mycobrowser_v3 CDS 716288 716914 . + 0 MSMEG_0635 MSMEG_0635 putative conserved exported protein A0QQ57 No unknown Rv0309 Rv0309 NC_008596.1 Mycobrowser_v3 CDS 716920 717405 . - 0 MSMEG_0636 MSMEG_0636 conserved hypothetical protein A0QQ58 No unknown Rv0310c Rv0310c NC_008596.1 Mycobrowser_v3 CDS 717434 719002 . - 0 MSMEG_0637 MSMEG_0637 iron-sulfur binding oxidoreductase identified by match to protein family HMM PF00355; match to protein family HMM PF01266 A0QQ59 No unknown NC_008596.1 Mycobrowser_v3 CDS 719172 721103 . + 0 MSMEG_0638 MSMEG_0638 conserved hypothetical proline and threonine rich protein A0QQ60 No unknown Rv0312 Rv0312 NC_008596.1 Mycobrowser_v3 CDS 721104 722114 . - 0 MSMEG_0639 MSMEG_0639 oligopeptide transport ATP-binding protein AppF identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727 A0QQ61 No unknown NC_008596.1 Mycobrowser_v3 CDS 722111 723097 . - 0 MSMEG_0640 MSMEG_0640 oligopeptide transport ATP-binding protein OppD identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727 A0QQ62 No unknown NC_008596.1 Mycobrowser_v3 CDS 814904 815572 . - 0 MSMEG_0729 MSMEG_0729 conserved hypothetical protein A0QQE7 No unknown Rv3481c Rv3481c NC_008596.1 Mycobrowser_v3 CDS 723094 724056 . - 0 MSMEG_0641 MSMEG_0641 binding-protein-dependent transport systems inner membrane component identified by match to protein family HMM PF00528 A0QQ63 No unknown NC_008596.1 Mycobrowser_v3 CDS 724060 725070 . - 0 MSMEG_0642 MSMEG_0642 hypothetical ABC transporter permease protein YliD identified by match to protein family HMM PF00528 A0QQ64 No unknown NC_008596.1 Mycobrowser_v3 CDS 725067 726722 . - 0 MSMEG_0643 MSMEG_0643 extracellular solute-binding protein, family protein 5, putative identified by match to protein family HMM PF00496 A0QQ65 No unknown NC_008596.1 Mycobrowser_v3 CDS 726931 727503 . + 0 MSMEG_0644 MSMEG_0644 cupin domain protein identified by match to protein family HMM PF07883 A0QQ66 No unknown NC_008596.1 Mycobrowser_v3 CDS 727629 728471 . + 0 MSMEG_0645 MSMEG_0645 putative beta-1,3-glucanase identified by match to protein family HMM PF00722 A0QQ67 No unknown Rv0315 Rv0315 NC_008596.1 Mycobrowser_v3 CDS 756845 757855 . - 0 MSMEG_0674 MSMEG_0674 ErfK/YbiS/YcfS/YnhG family protein identified by match to protein family HMM PF03734 A0QQ95 No unknown Rv1433 Rv1433 NC_008596.1 Mycobrowser_v3 CDS 728572 730170 . - 0 MSMEG_0646 MSMEG_0646 putative transporter identified by match to protein family HMM PF00528; match to protein family HMM TIGR01097 A0QQ68 No unknown NC_008596.1 Mycobrowser_v3 CDS 730087 730212 . + 0 MSMEG_0648 MSMEG_0648 hypothetical protein identified by Glimmer2; putative A0QQ69 No unknown NC_008596.1 Mycobrowser_v3 CDS 730167 730958 . - 0 MSMEG_0647 phnC phosphonate ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM TIGR02315 A0QQ70 No unknown NC_008596.1 Mycobrowser_v3 CDS 730969 731934 . - 0 MSMEG_0649 MSMEG_0649 phosphonate-binding periplasmic protein identified by match to protein family HMM TIGR01098 A0QQ71 No unknown NC_008596.1 Mycobrowser_v3 CDS 3399213 3400114 . - 0 MSMEG_3320 MSMEG_3320 LysR-family transcriptional regulator; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00126 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 732117 732869 . + 0 MSMEG_0650 MSMEG_0650 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07702 A0QQ72 No unknown NC_008596.1 Mycobrowser_v3 CDS 732984 733664 . + 0 MSMEG_0651 MSMEG_0651 putative conserved exported protein A0QQ73 No unknown Rv0320 Rv0320 NC_008596.1 Mycobrowser_v3 CDS 733710 734573 . + 0 MSMEG_0652 MSMEG_0652 hypothetical protein identified by Glimmer2; putative A0QQ74 No unknown NC_008596.1 Mycobrowser_v3 CDS 991188 991748 . - 0 MSMEG_0905 pcaC 4-carboxymuconolactone decarboxylase domain protein identified by match to protein family HMM PF02627 A0QQX0 No unknown Rv0464c Rv0464c NC_008596.1 Mycobrowser_v3 CDS 735585 736520 . - 0 MSMEG_0654 MSMEG_0654 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QQ75 No unknown NC_008596.1 Mycobrowser_v3 CDS 736636 737415 . + 0 MSMEG_0655 MSMEG_0655 glucose 1-dehydrogenase, putative identified by match to protein family HMM PF00106 A0QQ76 No unknown NC_008596.1 Mycobrowser_v3 CDS 955503 955901 . + 0 MSMEG_0869 MSMEG_0869 hypothetical protein identified by Glimmer2; putative A0QQT4 No unknown NC_008596.1 Mycobrowser_v3 CDS 738064 739248 . - 0 MSMEG_0657 MSMEG_0657 Rieske 2Fe-2S domain protein identified by match to protein family HMM PF00355 A0QQ78 No unknown Rv3161c Rv3161c NC_008596.1 Mycobrowser_v3 CDS 739263 740168 . - 0 MSMEG_0658 MSMEG_0658 polyamine ABC-transporter, inner membrane subunit identified by match to protein family HMM PF00528 A0QQ79 No unknown NC_008596.1 Mycobrowser_v3 CDS 740165 741106 . - 0 MSMEG_0659 MSMEG_0659 polyamine ABC transporter permease protein identified by match to protein family HMM PF00528 A0QQ80 No unknown NC_008596.1 Mycobrowser_v3 CDS 741111 742385 . - 0 MSMEG_0660 MSMEG_0660 Bacterial extracellular solute-binding protein identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409 A0QQ81 No unknown NC_008596.1 Mycobrowser_v3 CDS 773110 773346 . + 0 MSMEG_0689 MSMEG_0689 hypothetical protein identified by Glimmer2; putative A0QQA9 No unknown NC_008596.1 Mycobrowser_v3 CDS 742519 743907 . + 0 MSMEG_0661 MSMEG_0661 glutamate-1-semialdehyde 2,1-aminomutase identified by match to protein family HMM PF00202 A0QQ82 No unknown NC_008596.1 Mycobrowser_v3 CDS 743924 745081 . + 0 MSMEG_0662 MSMEG_0662 putrescine transport ATP-binding protein PotG identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM TIGR01187 A0QQ83 No unknown NC_008596.1 Mycobrowser_v3 CDS 745088 745795 . - 0 MSMEG_0663 MSMEG_0663 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QQ84 No unknown NC_008596.1 Mycobrowser_v3 CDS 794808 795467 . - 0 MSMEG_0707 MSMEG_0707 conserved hypothetical protein identified by similarity to GB:CAD18384.1; match to protein family HMM PF03737 A0QQC6 No unknown NC_008596.1 Mycobrowser_v3 CDS 745913 747574 . + 0 MSMEG_0664 MSMEG_0664 FAD dependent oxidoreductase identified by match to protein family HMM PF01266 A0QQ85 No unknown Rv3829c Rv3829c NC_008596.1 Mycobrowser_v3 CDS 812164 813117 . + 0 MSMEG_0725 MSMEG_0725 IS1137, transposase orfB similar at the nucleotide level to IS1137 in the IS Finder database.; identified by match to protein family HMM PF00665 A0QQE3 No unknown NC_008596.1 Mycobrowser_v3 CDS 747619 749646 . + 0 MSMEG_0666 MSMEG_0666 acetyl-CoA synthetase, putative identified by match to protein family HMM PF02629 A0QQ86 No unknown NC_008596.1 Mycobrowser_v3 CDS 749627 750838 . - 0 MSMEG_0665 MSMEG_0665 sarcosine oxidase subunit beta, putative identified by match to protein family HMM PF01266 A0QQ87 No unknown NC_008596.1 Mycobrowser_v3 CDS 765518 766270 . + 0 MSMEG_0682 MSMEG_0682 conserved hypothetical protein, putative identified by match to protein family HMM PF07398; match to protein family HMM TIGR03083 A0QQA2 No unknown Rv0332 Rv0332 NC_008596.1 Mycobrowser_v3 CDS 750914 752092 . + 0 MSMEG_0667 MSMEG_0667 butyryl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QQ88 No unknown NC_008596.1 Mycobrowser_v3 CDS 752138 752347 . + 0 MSMEG_0668 MSMEG_0668 integral membrane protein A0QQ89 No unknown NC_008596.1 Mycobrowser_v3 CDS 752392 753333 . + 0 MSMEG_0670 MSMEG_0670 FAD dependent oxidoreductase identified by match to protein family HMM PF03486; match to protein family HMM PF07992 A0QQ90 No unknown NC_008596.1 Mycobrowser_v3 CDS 753330 753836 . - 0 MSMEG_0669 MSMEG_0669 hypothetical protein identified by Glimmer2; putative A0QQ91 No unknown NC_008596.1 Mycobrowser_v3 CDS 753920 755068 . - 0 MSMEG_0671 MSMEG_0671 S-(hydroxymethyl)glutathione dehydrogenase identified by match to protein family HMM PF00107 A0QQ92 No unknown NC_008596.1 Mycobrowser_v3 CDS 755161 755814 . - 0 MSMEG_0672 MSMEG_0672 conserved hypothetical protein A0QQ93 No unknown NC_008596.1 Mycobrowser_v3 CDS 755982 756524 . - 0 MSMEG_0673 MSMEG_0673 hypothetical protein identified by Glimmer2; putative A0QQ94 No unknown Rv1435c Rv1435c NC_008596.1 Mycobrowser_v3 CDS 792264 792803 . - 0 MSMEG_0704 MSMEG_0704 LpqJ protein A0QQC3 No unknown Rv0344c Rv0344c NC_008596.1 Mycobrowser_v3 CDS 758055 759272 . - 0 MSMEG_0675 MSMEG_0675 putative cytochrome P450 144 identified by match to protein family HMM PF00067 A0QQ96 No unknown Rv1777 Rv1777 NC_008596.1 Mycobrowser_v3 CDS 759460 759996 . + 0 MSMEG_0676 MSMEG_0676 putative transcriptional regulatory protein identified by match to protein family HMM PF00440 A0QQ97 No unknown Rv1776c Rv1776c NC_008596.1 Mycobrowser_v3 CDS 760192 760761 . + 0 MSMEG_0678 dcd deoxycytidine triphosphate deaminase identified by match to protein family HMM PF00692; match to protein family HMM TIGR02274 A0QQ98 No unknown Rv0321 Rv0321 NC_008596.1 Mycobrowser_v3 CDS 795587 796540 . + 0 MSMEG_0708 MSMEG_0708 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QQC7 No unknown NC_008596.1 Mycobrowser_v3 CDS 761054 762742 . + 0 MSMEG_0679 MSMEG_0679 conserved hypothetical protein A0QQ99 No unknown NC_008596.1 Mycobrowser_v3 CDS 762836 764170 . + 0 MSMEG_0680 MSMEG_0680 UDP-glucose 6-dehydrogenase identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 A0QQA0 No unknown Rv0322 Rv0322 NC_008596.1 Mycobrowser_v3 CDS 764248 765516 . + 0 MSMEG_0681 MSMEG_0681 P450 heme-thiolate protein identified by match to protein family HMM PF00067 A0QQA1 No unknown Rv1880c Rv1880c NC_008596.1 Mycobrowser_v3 CDS 1419914 1420030 . - 0 MSMEG_1324 MSMEG_1324 hypothetical protein identified by Glimmer2; putative A0QS26 No unknown NC_008596.1 Mycobrowser_v3 CDS 766670 768784 . - 0 MSMEG_0684 MSMEG_0684 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding identified by match to protein family HMM PF01315; match to protein family HMM PF02738 A0QQA4 No unknown NC_008596.1 Mycobrowser_v3 CDS 768781 769776 . - 0 MSMEG_0685 MSMEG_0685 oxidoreductase, molybdopterin-binding subunit identified by match to protein family HMM PF00941; match to protein family HMM PF03450 A0QQA5 No unknown NC_008596.1 Mycobrowser_v3 CDS 769773 770294 . - 0 MSMEG_0686 MSMEG_0686 oxidoreductase identified by match to protein family HMM PF00111; match to protein family HMM PF01799 A0QQA6 No unknown NC_008596.1 Mycobrowser_v3 CDS 770334 771569 . - 0 MSMEG_0687 MSMEG_0687 conserved hypothetical protein identified by match to protein family HMM PF07907 A0QQA7 No unknown NC_008596.1 Mycobrowser_v3 CDS 771588 772862 . - 0 MSMEG_0688 MSMEG_0688 aspartate aminotransferase identified by match to protein family HMM PF00155 A0QQA8 No unknown Rv0337c Rv0337c NC_008596.1 Mycobrowser_v3 CDS 773427 776555 . - 0 MSMEG_0690 MSMEG_0690 iron-sulfur cluster-binding protein identified by match to protein family HMM PF00037; match to protein family HMM PF02754 A0QQB0 No unknown Rv0338c Rv0338c NC_008596.1 Mycobrowser_v3 CDS 853466 853876 . + 0 MSMEG_0768 MSMEG_0768 conserved hypothetical protein A0QQI6 No unknown Rv0390 Rv0390 NC_008596.1 Mycobrowser_v3 CDS 813145 813267 . - 0 MSMEG_0726 MSMEG_0726 hypothetical protein identified by Glimmer2; putative A0QQE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 813749 814006 . - 0 MSMEG_0727 MSMEG_0727 hypothetical protein identified by Glimmer2; putative A0QQE5 No unknown NC_008596.1 Mycobrowser_v3 CDS 776854 779364 . - 0 MSMEG_0691 MSMEG_0691 putative transcriptional regulatory protein identified by match to protein family HMM PF00196 A0QQB1 No unknown Rv0339c Rv0339c NC_008596.1 Mycobrowser_v3 CDS 779379 781166 . - 0 MSMEG_0692 MSMEG_0692 conserved hypothetical protein A0QQB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 781358 781909 . + 0 MSMEG_0693 MSMEG_0693 conserved hypothetical protein A0QQB3 No unknown NC_008596.1 Mycobrowser_v3 CDS 783439 785247 . + 0 MSMEG_0695 MSMEG_0695 isoniazid inductible protein IniA A0QQB4 No unknown Rv0342 Rv0342 NC_008596.1 Mycobrowser_v3 CDS 785583 785996 . - 0 MSMEG_0697 MSMEG_0697 integral membrane protein identified by match to protein family HMM PF07332 A0QQB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 786166 787659 . + 0 MSMEG_0698 MSMEG_0698 isoniazid inductible protein IniC A0QQB7 No unknown Rv0343 Rv0343 NC_008596.1 Mycobrowser_v3 CDS 787715 789565 . + 0 MSMEG_0699 MSMEG_0699 conserved hypothetical proline rich protein A0QQB8 No unknown NC_008596.1 Mycobrowser_v3 CDS 789578 790090 . - 0 MSMEG_0700 MSMEG_0700 hypothetical protein identified by Glimmer2; putative A0QQB9 No unknown NC_008596.1 Mycobrowser_v3 CDS 790135 790428 . + 0 MSMEG_0701 MSMEG_0701 hypothetical protein identified by Glimmer2; putative A0QQC0 No unknown NC_008596.1 Mycobrowser_v3 CDS 790621 791553 . - 0 MSMEG_0702 MSMEG_0702 monooxygenase identified by match to protein family HMM PF00296 A0QQC1 No unknown NC_008596.1 Mycobrowser_v3 CDS 791573 792196 . - 0 MSMEG_0703 MSMEG_0703 conserved hypothetical protein identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03085 A0QQC2 No unknown Rv1929c Rv1929c NC_008596.1 Mycobrowser_v3 CDS 792856 794181 . - 0 MSMEG_0705 MSMEG_0705 putative permease of the major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QQC4 No unknown NC_008596.1 Mycobrowser_v3 CDS 794200 794811 . - 0 MSMEG_0706 MSMEG_0706 4-carboxy-4-hydroxy-2-oxoadipate aldolase identified by match to protein family HMM PF03737 A0QQC5 No unknown NC_008596.1 Mycobrowser_v3 CDS 796766 798634 . + 0 MSMEG_0709 dnaK chaperone protein DnaK identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350 A0QQC8 No unknown Rv0350 Rv0350 NC_008596.1 Mycobrowser_v3 CDS 798631 799281 . + 0 MSMEG_0710 grpE co-chaperone GrpE identified by match to protein family HMM PF01025 A0QQC9 No unknown Rv0351 Rv0351 NC_008596.1 Mycobrowser_v3 CDS 799323 800495 . + 0 MSMEG_0711 dnaJ chaperone protein DnaJ identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349 A0QQD0 No unknown Rv0352 Rv0352 NC_008596.1 Mycobrowser_v3 CDS 800492 800851 . + 0 MSMEG_0713 MSMEG_0713 transcriptional regulator, MerR family protein identified by match to protein family HMM PF00376 A0QQD1 No unknown Rv0353 Rv0353 NC_008596.1 Mycobrowser_v3 CDS 800848 801438 . - 0 MSMEG_0712 MSMEG_0712 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QQD2 No unknown NC_008596.1 Mycobrowser_v3 CDS 816851 817474 . - 0 MSMEG_0731 MSMEG_0731 conserved hypothetical protein A0QQE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 801516 802700 . - 0 MSMEG_0714 MSMEG_0714 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QQD3 No unknown NC_008596.1 Mycobrowser_v3 CDS 802729 803472 . - 0 MSMEG_0715 MSMEG_0715 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QQD4 No unknown NC_008596.1 Mycobrowser_v3 CDS 803662 804960 . + 0 MSMEG_0716 MSMEG_0716 major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QQD5,A4ZHU3 No unknown NC_008596.1 Mycobrowser_v3 CDS 804960 806609 . + 0 MSMEG_0718 MSMEG_0718 acetyl-CoA synthetase identified by match to protein family HMM PF00501 A0QQD6 No unknown NC_008596.1 Mycobrowser_v3 CDS 806596 807498 . - 0 MSMEG_0717 MSMEG_0717 aldose 1-epimerase subfamily protein identified by match to protein family HMM PF01263 A0QQD7 No unknown NC_008596.1 Mycobrowser_v3 CDS 807543 808682 . - 0 MSMEG_0719 MSMEG_0719 flavohemoprotein identified by match to protein family HMM PF00042; match to protein family HMM PF00175; match to protein family HMM PF00970 A0QQD8 No unknown Rv0385 Rv0385 NC_008596.1 Mycobrowser_v3 CDS 808724 809722 . - 0 MSMEG_0720 MSMEG_0720 integral membrane protein A0QQD9 No unknown NC_008596.1 Mycobrowser_v3 CDS 814372 814680 . - 0 MSMEG_0728 MSMEG_0728 hypothetical protein identified by Glimmer2; putative A0QQE6 No unknown NC_008596.1 Mycobrowser_v3 CDS 815642 816844 . - 0 MSMEG_0730 MSMEG_0730 oleandomycin glycosyltransferase identified by match to protein family HMM PF00201; match to protein family HMM TIGR01426 A0QQE8 No unknown NC_008596.1 Mycobrowser_v3 CDS 817638 820184 . + 0 MSMEG_0732 MSMEG_0732 chaperone ClpB identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 A0QQF0 No unknown Rv0384c Rv0384c NC_008596.1 Mycobrowser_v3 CDS 820263 821342 . - 0 MSMEG_0733 dapB dihydrodipicolinate reductase, N-terminus domain protein identified by match to protein family HMM PF01113 A0QQF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 821339 822418 . - 0 MSMEG_0734 MSMEG_0734 Rieske [2Fe-2S] domain protein identified by match to protein family HMM PF00355 A0QQF2 No unknown NC_008596.1 Mycobrowser_v3 CDS 822502 823164 . + 0 MSMEG_0735 MSMEG_0735 putative transcriptional regulator identified by match to protein family HMM PF00440 A0QQF3 No unknown NC_008596.1 Mycobrowser_v3 CDS 823231 824067 . + 0 MSMEG_0736 MSMEG_0736 conserved hypothetical protein A0QQF4 No unknown Rv0383c Rv0383c NC_008596.1 Mycobrowser_v3 CDS 824113 824889 . + 0 MSMEG_0737 MSMEG_0737 dehydrogenase identified by match to protein family HMM PF00106 A0QQF5 No unknown NC_008596.1 Mycobrowser_v3 CDS 824920 825822 . + 0 MSMEG_0738 MSMEG_0738 conserved hypothetical protein A0QQF6 No unknown Rv0381c Rv0381c NC_008596.1 Mycobrowser_v3 CDS 825815 826459 . + 0 MSMEG_0739 MSMEG_0739 spou rRNA methylase family protein identified by match to protein family HMM PF00588 A0QQF7 No unknown Rv0380c Rv0380c NC_008596.1 Mycobrowser_v3 CDS 826475 827656 . + 0 MSMEG_0740 MSMEG_0740 glycosyl hydrolase family protein 76 identified by match to protein family HMM PF03663 A0QQF8 No unknown Rv0365c Rv0365c NC_008596.1 Mycobrowser_v3 CDS 827660 828568 . + 0 MSMEG_0741 MSMEG_0741 conserved hypothetical protein A0QQF9 No unknown NC_008596.1 Mycobrowser_v3 CDS 828573 829526 . - 0 MSMEG_0742 MSMEG_0742 probable transcriptional regulatory protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QQG0 No unknown Rv0377 Rv0377 NC_008596.1 Mycobrowser_v3 CDS 829538 830698 . + 0 MSMEG_0743 MSMEG_0743 xanthine dehydrogenase identified by match to protein family HMM PF02625 A0QQG1 No unknown Rv0376c Rv0376c NC_008596.1 Mycobrowser_v3 CDS 830754 831644 . + 0 MSMEG_0744 MSMEG_0744 carbon monoxide dehydrogenase medium chain identified by match to protein family HMM PF00941; match to protein family HMM PF03450 A0QQG2 No unknown Rv0375c Rv0375c NC_008596.1 Mycobrowser_v3 CDS 831647 832123 . + 0 MSMEG_0745 MSMEG_0745 [2Fe-2S] binding domain protein identified by match to protein family HMM PF00111; match to protein family HMM PF01799 A0QQG3 No unknown Rv0374c Rv0374c NC_008596.1 Mycobrowser_v3 CDS 832120 834519 . + 0 MSMEG_0746 MSMEG_0746 carbon-monoxide dehydrogenase, large subunit identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02416 A0QQG4 No unknown Rv0373c Rv0373c NC_008596.1 Mycobrowser_v3 CDS 834538 835275 . + 0 MSMEG_0747 MSMEG_0747 carbon monoxide dehydrogenase F protein identified by match to protein family HMM PF02625 A0QQG5 No unknown Rv0372c Rv0372c NC_008596.1 Mycobrowser_v3 CDS 835259 836161 . + 0 MSMEG_0748 MSMEG_0748 ATPase associated with various cellular activities, AAA_5 identified by match to protein family HMM PF00004; match to protein family HMM PF07726; match to protein family HMM PF07728 A0QQG6 No unknown Rv0370c Rv0370c NC_008596.1 Mycobrowser_v3 CDS 836174 836869 . + 0 MSMEG_0749 MSMEG_0749 carbon monoxide dehydrogenase subunit G (CoxG) family protein identified by match to protein family HMM PF06240 A0QQG7 No unknown NC_008596.1 Mycobrowser_v3 CDS 836866 838059 . + 0 MSMEG_0751 MSMEG_0751 conserved hypothetical protein identified by match to protein family HMM PF05762 A0QQG8 No unknown Rv0368c Rv0368c NC_008596.1 Mycobrowser_v3 CDS 838056 838778 . - 0 MSMEG_0750 MSMEG_0750 membrane protein A0QQG9 No unknown NC_008596.1 Mycobrowser_v3 CDS 838859 839896 . + 0 MSMEG_0752 fbaA fructose-bisphosphate aldolase, class II identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01520 A0QQH0 No unknown Rv0363c Rv0363c NC_008596.1 Mycobrowser_v3 CDS 900619 900891 . - 0 MSMEG_0814 MSMEG_0814 membrane protein A0QQN1 No unknown NC_008596.1 Mycobrowser_v3 CDS 839930 840730 . - 0 MSMEG_0753 MSMEG_0753 conserved hypothetical protein A0QQH1 No unknown Rv0361 Rv0361 NC_008596.1 Mycobrowser_v3 CDS 840804 841211 . + 0 MSMEG_0754 MSMEG_0754 conserved hypothetical protein A0QQH2 No unknown Rv0360c Rv0360c NC_008596.1 Mycobrowser_v3 CDS 841222 842115 . - 0 MSMEG_0755 MSMEG_0755 cobalt-zinc-cadmium resistance protein identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297 A0QQH3 No unknown NC_008596.1 Mycobrowser_v3 CDS 842208 842702 . + 0 MSMEG_0757 MSMEG_0757 hypothetical protein identified by Glimmer2; putative A0QQH4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1044054 1044707 . + 0 MSMEG_0971 MSMEG_0971 conserved hypothetical protein A0QR35 No unknown Rv0526 Rv0526 NC_008596.1 Mycobrowser_v3 CDS 842699 843478 . - 0 MSMEG_0756 MSMEG_0756 peptidase, M50B family protein identified by match to protein family HMM PF02163 A0QQH5 No unknown Rv0359 Rv0359 NC_008596.1 Mycobrowser_v3 CDS 843524 844063 . - 0 MSMEG_0758 MSMEG_0758 conserved hypothetical protein A0QQH6 No unknown Rv0358 Rv0358 NC_008596.1 Mycobrowser_v3 CDS 844214 845509 . + 0 MSMEG_0759 purA adenylosuccinate synthetase identified by match to protein family HMM PF00709; match to protein family HMM TIGR00184 A0QQH7 No unknown Rv0357c Rv0357c NC_008596.1 Mycobrowser_v3 CDS 845509 846159 . + 0 MSMEG_0760 MSMEG_0760 thioesterase family protein identified by match to protein family HMM PF03061 A0QQH8 No unknown Rv0356c Rv0356c NC_008596.1 Mycobrowser_v3 CDS 846166 846360 . - 0 MSMEG_0761 MSMEG_0761 conserved domain protein A0QQH9 No unknown NC_008596.1 Mycobrowser_v3 CDS 846366 847571 . - 0 MSMEG_0762 MSMEG_0762 cytochrome P450 FAS1 identified by match to protein family HMM PF00067 A0QQI0 No unknown NC_008596.1 Mycobrowser_v3 CDS 847627 849621 . - 0 MSMEG_0763 MSMEG_0763 antibiotic transporter identified by match to protein family HMM PF03176 A0QQI1 No unknown NC_008596.1 Mycobrowser_v3 CDS 880120 880869 . + 0 MSMEG_0794 MSMEG_0794 conserved hypothetical protein A0QQL1 No unknown NC_008596.1 Mycobrowser_v3 CDS 849626 851209 . - 0 MSMEG_0764 MSMEG_0764 Na+/H+ antiporter identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831 A0QQI2 No unknown NC_008596.1 Mycobrowser_v3 CDS 851254 851556 . + 0 MSMEG_0765 MSMEG_0765 zinc finger, UBP-type A0QQI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 851580 852980 . + 0 MSMEG_0766 purT phosphoribosylglycinamide formyltransferase 2 identified by match to protein family HMM PF02222 A0QQI4 No unknown Rv0389 Rv0389 NC_008596.1 Mycobrowser_v3 CDS 852984 853469 . + 0 MSMEG_0767 MSMEG_0767 hypothetical protein identified by Glimmer2; putative A0QQI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 853886 855103 . + 0 MSMEG_0769 metZ O-succinylhomoserine sulfhydrylase identified by match to protein family HMM PF01053; match to protein family HMM TIGR01325 A0QQI7 No unknown Rv0391 Rv0391 NC_008596.1 Mycobrowser_v3 CDS 855107 855514 . + 0 MSMEG_0770 MSMEG_0770 hypothetical protein identified by Glimmer2; putative A0QQI8 No unknown NC_008596.1 Mycobrowser_v3 CDS 855584 856444 . - 0 MSMEG_0771 MSMEG_0771 putative oxidoreductase YqjQ identified by match to protein family HMM PF00106 A0QQI9 No unknown Rv1865c Rv1865c NC_008596.1 Mycobrowser_v3 CDS 856524 857672 . - 0 MSMEG_0772 MSMEG_0772 phytase A0QQJ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 857779 858309 . + 0 MSMEG_0773 MSMEG_0773 acetyltransferase identified by match to protein family HMM PF00583 A0QQJ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 859468 859779 . + 0 MSMEG_0776 MSMEG_0776 conserved hypothetical protein A0QQJ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 859776 860522 . - 0 MSMEG_0775 MSMEG_0775 metallo-beta-lactamase superfamily protein identified by match to protein family HMM PF00753 A0QQJ3 No unknown Rv0406c Rv0406c NC_008596.1 Mycobrowser_v3 CDS 1420278 1420427 . + 0 MSMEG_1326 MSMEG_1326 hypothetical protein identified by Glimmer2; putative A0QS27 No unknown NC_008596.1 Mycobrowser_v3 CDS 860554 861567 . + 0 MSMEG_0777 MSMEG_0777 F420-dependent glucose-6-phosphate dehydrogenase identified by match to protein family HMM PF00296 A0QQJ4 No unknown Rv0407 Rv0407 NC_008596.1 Mycobrowser_v3 CDS 861746 862510 . - 0 MSMEG_0778 MSMEG_0778 putative transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07702 A0QQJ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 862519 863295 . - 0 MSMEG_0779 MSMEG_0779 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106; match to protein family HMM PF01073 A0QQJ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 863307 864413 . - 0 MSMEG_0780 MSMEG_0780 phosphotransferase enzyme family protein identified by match to protein family HMM PF01636 A0QQJ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 864599 866176 . + 0 MSMEG_0781 MSMEG_0781 amino acid permease identified by match to protein family HMM PF00324 A0QQJ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 866234 867556 . + 0 MSMEG_0782 MSMEG_0782 aminotransferase class-III identified by match to protein family HMM PF00202 A0QQJ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 867578 869656 . + 0 MSMEG_0783 pta phosphate acetyltransferase identified by match to protein family HMM PF01515; match to protein family HMM PF07085; match to protein family HMM TIGR00651 A0QQK0 No unknown Rv0408 Rv0408 NC_008596.1 Mycobrowser_v3 CDS 933768 934085 . + 0 MSMEG_0849 MSMEG_0849 oxygenase A0QQR4 No unknown NC_008596.1 Mycobrowser_v3 CDS 869653 870783 . + 0 MSMEG_0784 ackA acetate kinase identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016 A0QQK1 No unknown Rv0409 Rv0409 NC_008596.1 Mycobrowser_v3 CDS 870902 871771 . - 0 MSMEG_0785 MSMEG_0785 conserved hypothetical protein A0QQK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 872016 874298 . - 0 MSMEG_0786 MSMEG_0786 serine/threonine protein kinase identified by match to protein family HMM PF00069 A0QQK3 No unknown Rv0410c Rv0410c NC_008596.1 Mycobrowser_v3 CDS 874298 875266 . - 0 MSMEG_0787 MSMEG_0787 Bacterial extracellular solute-binding protein, family protein 3 identified by match to protein family HMM PF00497 A0QQK4 No unknown Rv0411c Rv0411c NC_008596.1 Mycobrowser_v3 CDS 938204 938851 . + 0 MSMEG_0856 MSMEG_0856 DNA-binding response regulator, LuxR family protein identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0QQS0 No unknown NC_008596.1 Mycobrowser_v3 CDS 875362 876675 . - 0 MSMEG_0788 MSMEG_0788 putative conserved membrane protein A0QQK5 No unknown Rv0412c Rv0412c NC_008596.1 Mycobrowser_v3 CDS 876862 877341 . + 0 MSMEG_0790 MSMEG_0790 hydrolase, NUDIX family protein identified by match to protein family HMM PF00293 A0QQK6 No unknown Rv0413 Rv0413 NC_008596.1 Mycobrowser_v3 CDS 877325 878008 . - 0 MSMEG_0789 thiE thiamine-phosphate pyrophosphorylase identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693 A0QQK7 No unknown Rv0414c Rv0414c NC_008596.1 Mycobrowser_v3 CDS 878147 879151 . + 0 MSMEG_0791 thiO glycine oxidase ThiO identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352 A0QQK8 No unknown Rv0415 Rv0415 NC_008596.1 Mycobrowser_v3 CDS 879148 879348 . + 0 MSMEG_0792 thiS thiamine biosynthesis protein ThiS identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683 A0QQK9 No unknown Rv0416 Rv0416 NC_008596.1 Mycobrowser_v3 CDS 879341 880099 . + 0 MSMEG_0793 thiG thiazole biosynthesis protein ThiG identified by similarity to SP:P30139; match to protein family HMM PF05690 A0QQL0 No unknown Rv0417 Rv0417 NC_008596.1 Mycobrowser_v3 CDS 880883 881794 . + 0 MSMEG_0795 MSMEG_0795 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0QQL2 No unknown NC_008596.1 Mycobrowser_v3 CDS 881791 882549 . + 0 MSMEG_0796 MSMEG_0796 ABC transporter integral membrane subunit A0QQL3 No unknown NC_008596.1 Mycobrowser_v3 CDS 885068 885736 . + 0 MSMEG_0798 MSMEG_0798 hypothetical protein identified by Glimmer2; putative A0QQL4 No unknown NC_008596.1 Mycobrowser_v3 CDS 885893 886069 . + 0 MSMEG_0799 MSMEG_0799 hypothetical protein identified by Glimmer2; putative A0QQL5 No unknown NC_008596.1 Mycobrowser_v3 CDS 886332 886511 . + 0 MSMEG_0800 MSMEG_0800 hypothetical protein identified by Glimmer2; putative A0QQL6 No unknown NC_008596.1 Mycobrowser_v3 CDS 886821 887522 . + 0 MSMEG_0801 MSMEG_0801 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1119333 1120034 . + 0 MSMEG_1051 MSMEG_1051 immunogenic protein MPB64/MPT64 A0QRB0 No unknown NC_008596.1 Mycobrowser_v3 CDS 887530 888852 . - 0 MSMEG_0802 MSMEG_0802 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 888571 889056 . + 0 MSMEG_0803 MSMEG_0803 hypothetical protein identified by Glimmer2; putative A0QQL9 No unknown NC_008596.1 Mycobrowser_v3 CDS 889186 889623 . - 0 MSMEG_0804 MSMEG_0804 hypothetical protein identified by Glimmer2; putative A0QQM0 No unknown NC_008596.1 Mycobrowser_v3 CDS 889631 890662 . + 0 MSMEG_0805 MSMEG_0805 conserved hypothetical protein A0QQM1 No unknown NC_008596.1 Mycobrowser_v3 CDS 890643 892154 . + 0 MSMEG_0806 MSMEG_0806 hydrolase identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389 A0QQM2 No unknown Rv0418 Rv0418 NC_008596.1 Mycobrowser_v3 CDS 892151 893602 . + 0 MSMEG_0807 MSMEG_0807 leupeptin-inactivating enzyme 1 identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389 A0QQM3 No unknown NC_008596.1 Mycobrowser_v3 CDS 893674 894762 . + 0 MSMEG_0808 MSMEG_0808 possible chalcone synthase Pks10 identified by match to protein family HMM PF00195; match to protein family HMM PF02797 A0QQM4 No unknown Rv1660 Rv1660 NC_008596.1 Mycobrowser_v3 CDS 894762 895265 . + 0 MSMEG_0809 MSMEG_0809 isoprenylcysteine carboxyl methyltransferase identified by match to protein family HMM PF04140 A0QQM5 No unknown Rv1139c Rv1139c NC_008596.1 Mycobrowser_v3 CDS 895262 896290 . + 0 MSMEG_0811 MSMEG_0811 oxidoreductase identified by match to protein family HMM PF01266; match to protein family HMM PF01494 A0QQM6 No unknown Rv1138c Rv1138c NC_008596.1 Mycobrowser_v3 CDS 910482 911318 . - 0 MSMEG_0825 thiD phosphomethylpyrimidine kinase identified by match to protein family HMM TIGR00097 A0QQP1 No unknown Rv0422c Rv0422c NC_008596.1 Mycobrowser_v3 CDS 896271 897566 . - 0 MSMEG_0810 MSMEG_0810 putative pyrimidine permease RutG identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801 A0QQM7 No unknown NC_008596.1 Mycobrowser_v3 CDS 897612 898832 . - 0 MSMEG_0812 MSMEG_0812 amino acid transporter identified by match to protein family HMM PF00324; match to protein family HMM PF01490 A0QQM8 No unknown Rv1999c Rv1999c NC_008596.1 Mycobrowser_v3 CDS 898848 899174 . - 0 MSMEG_0813 MSMEG_0813 conserved hypothetical protein A0QQM9 No unknown Rv0420c Rv0420c NC_008596.1 Mycobrowser_v3 CDS 915135 916205 . - 0 MSMEG_0828 MSMEG_0828 immunogenic protein MPT63 A0QQP4 No unknown NC_008596.1 Mycobrowser_v3 CDS 899192 900652 . + 0 MSMEG_0815 MSMEG_0815 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QQN0 No unknown NC_008596.1 Mycobrowser_v3 CDS 900908 902392 . - 0 MSMEG_0816 MSMEG_0816 flavin-binding monooxygenase identified by match to protein family HMM PF01266; match to protein family HMM PF07992 A0QQN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 902464 903387 . + 0 MSMEG_0817 MSMEG_0817 LysR-family protein transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QQN3 No unknown NC_008596.1 Mycobrowser_v3 CDS 903499 904851 . + 0 MSMEG_0818 MSMEG_0818 transporter, major facilitator family protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QQN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 904883 906142 . + 0 MSMEG_0819 MSMEG_0819 N-carbamoyl-L-amino acid amidohydrolase identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879 A0QQN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 906142 907605 . + 0 MSMEG_0821 MSMEG_0821 glutamyl-tRNA(Gln) amidotransferase subunit A identified by match to protein family HMM PF01425 A0QQN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 907599 907868 . - 0 MSMEG_0820 MSMEG_0820 conserved hypothetical protein A0QQN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 907874 909241 . - 0 MSMEG_0822 MSMEG_0822 cytochrome P450 identified by match to protein family HMM PF00067 A0QQN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 909288 909842 . - 0 MSMEG_0823 MSMEG_0823 conserved hypothetical protein A0QQN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 909845 910492 . - 0 MSMEG_0824 MSMEG_0824 conserved hypothetical protein A0QQP0 No unknown Rv0421c Rv0421c NC_008596.1 Mycobrowser_v3 CDS 911327 912901 . - 0 MSMEG_0826 thiC thiamine biosynthesis protein ThiC identified by match to protein family HMM PF01964; match to protein family HMM TIGR00190 A0QQP2 No unknown Rv0423c Rv0423c NC_008596.1 Mycobrowser_v3 CDS 913283 915019 . + 0 MSMEG_0827 MSMEG_0827 major facilitator superfamily protein MFS_1 identified by match to protein family HMM PF07690 A0QQP3 No unknown NC_008596.1 Mycobrowser_v3 CDS 916410 917192 . - 0 MSMEG_0829 xth exodeoxyribonuclease III identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633 A0QQP5 No unknown Rv0427c Rv0427c NC_008596.1 Mycobrowser_v3 CDS 917379 918095 . + 0 MSMEG_0831 MSMEG_0831 short chain dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QQP6 No unknown NC_008596.1 Mycobrowser_v3 CDS 918079 919005 . - 0 MSMEG_0830 MSMEG_0830 acetyltransferase, gnat family protein identified by match to protein family HMM PF00583 A0QQP7 No unknown NC_008596.1 Mycobrowser_v3 CDS 919024 919617 . - 0 MSMEG_0832 def peptide deformylase identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079 A0QQP8 No unknown Rv0429c Rv0429c NC_008596.1 Mycobrowser_v3 CDS 919745 920056 . + 0 MSMEG_0833 MSMEG_0833 conserved hypothetical protein A0QQP9 No unknown NC_008596.1 Mycobrowser_v3 CDS 920096 920572 . + 0 MSMEG_0834 MSMEG_0834 tuberculin related peptide A0QQQ0 No unknown Rv0431 Rv0431 NC_008596.1 Mycobrowser_v3 CDS 920583 921293 . + 0 MSMEG_0835 sodC copper/zinc superoxide dismutase identified by similarity to PDB:1IB5_A.0; match to protein family HMM PF00080 A0QQQ1 No unknown Rv0432 Rv0432 NC_008596.1 Mycobrowser_v3 CDS 938818 939270 . - 0 MSMEG_0855 MSMEG_0855 conserved hypothetical protein identified by match to protein family HMM PF08044 A0QQS1 No unknown NC_008596.1 Mycobrowser_v3 CDS 921274 922404 . + 0 MSMEG_0836 MSMEG_0836 carboxylate-amine ligase identified by match to protein family HMM PF04107; match to protein family HMM TIGR02050 A0QQQ2 No unknown Rv0433 Rv0433 NC_008596.1 Mycobrowser_v3 CDS 922415 922870 . + 0 MSMEG_0837 MSMEG_0837 hypothetical protein identified by Glimmer2; putative A0QQQ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 922879 923928 . - 0 MSMEG_0838 MSMEG_0838 AsnC-family protein transcriptional regulator identified by match to protein family HMM PF01037 A0QQQ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 924025 924651 . + 0 MSMEG_0839 MSMEG_0839 ATP-dependent protease La (LON) domain subfamily protein identified by match to protein family HMM PF02190 A0QQQ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 924856 925509 . - 0 MSMEG_0840 MSMEG_0840 hypothetical protein identified by Glimmer2; putative A0QQQ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 926980 927264 . - 0 MSMEG_0842 MSMEG_0842 hypothetical protein identified by Glimmer2; putative A0QQQ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 928673 930268 . - 0 MSMEG_0846 MSMEG_0846 NADH-ubiquinone oxidoreductase/multisubunit na+/h+ antiporter, d subunit identified by match to protein family HMM PF00361 A0QQR1 No unknown NC_008596.1 Mycobrowser_v3 CDS 930265 930732 . - 0 MSMEG_0847 MSMEG_0847 NADH-ubiquinone/plastoquinone oxidoreductase chain 4l family protein identified by match to protein family HMM PF00420 A0QQR2 No unknown NC_008596.1 Mycobrowser_v3 CDS 930732 933713 . - 0 MSMEG_0848 MSMEG_0848 NADH ubiquinone oxidoreductase subunit 5 identified by match to protein family HMM PF00361; match to protein family HMM PF04039 A0QQR3 No unknown NC_008596.1 Mycobrowser_v3 CDS 934162 935004 . + 0 MSMEG_0850 MSMEG_0850 conserved hypothetical protein A0QQR5 No unknown NC_008596.1 Mycobrowser_v3 CDS 935059 936345 . - 0 MSMEG_0851 MSMEG_0851 Citrate transporter identified by match to protein family HMM PF02040; match to protein family HMM PF03600 A0QQR6 No unknown Rv2684,Rv2685 Rv2684,Rv2685 NC_008596.1 Mycobrowser_v3 CDS 936364 936822 . - 0 MSMEG_0852 MSMEG_0852 CBS domain protein identified by match to protein family HMM PF00571 A0QQR7 No unknown Rv2683 Rv2683 NC_008596.1 Mycobrowser_v3 CDS 936855 937103 . - 0 MSMEG_0853 MSMEG_0853 conserved hypothetical protein A0QQR8 No unknown NC_008596.1 Mycobrowser_v3 CDS 937236 938204 . + 0 MSMEG_0854 MSMEG_0854 two-component system sensor kinase identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF07730 A0QQR9 No unknown NC_008596.1 Mycobrowser_v3 CDS 939331 939645 . - 0 MSMEG_0857 MSMEG_0857 conserved hypothetical protein A0QQS2 No unknown NC_008596.1 Mycobrowser_v3 CDS 939739 940752 . + 0 MSMEG_0859 MSMEG_0859 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QQS3 No unknown NC_008596.1 Mycobrowser_v3 CDS 940749 942986 . - 0 MSMEG_0858 MSMEG_0858 cell division control protein Cdc48 identified by match to protein family HMM PF00004; match to protein family HMM PF02359 A0QQS4 No unknown Rv0435c Rv0435c NC_008596.1 Mycobrowser_v3 CDS 942988 943848 . - 0 MSMEG_0860 MSMEG_0860 CDP-diacylglycerol--serine O-phosphatidyltransferase identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473 A0QQS5 No unknown Rv0436c Rv0436c NC_008596.1 Mycobrowser_v3 CDS 943845 944543 . - 0 MSMEG_0861 psd phosphatidylserine decarboxylase identified by match to protein family HMM PF02666; match to protein family HMM TIGR00164 A0QQS6 No unknown Rv0437c Rv0437c NC_008596.1 Mycobrowser_v3 CDS 944579 945775 . - 0 MSMEG_0862 MSMEG_0862 molybdopterin biosynthesis protein MoeA identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177 A0QQS7 No unknown Rv0438c Rv0438c NC_008596.1 Mycobrowser_v3 CDS 977160 978005 . + 0 MSMEG_0892 MSMEG_0892 conserved hypothetical protein A0QQV7 No unknown NC_008596.1 Mycobrowser_v3 CDS 945772 946695 . - 0 MSMEG_0863 MSMEG_0863 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QQS8 No unknown NC_008596.1 Mycobrowser_v3 CDS 946733 947272 . + 0 MSMEG_0864 MSMEG_0864 bacterial membrane flanked domain family protein identified by match to protein family HMM PF03703 A0QQS9 No unknown Rv1227c Rv1227c NC_008596.1 Mycobrowser_v3 CDS 947269 948768 . + 0 MSMEG_0865 MSMEG_0865 bacterial membrane flanked domain family protein identified by match to protein family HMM PF03703 A0QQT0 No unknown NC_008596.1 Mycobrowser_v3 CDS 948794 949609 . + 0 MSMEG_0867 MSMEG_0867 hydrolase identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460 A0QQT1 No unknown Rv1225c Rv1225c NC_008596.1 Mycobrowser_v3 CDS 949606 951312 . - 0 MSMEG_0866 MSMEG_0866 DNA or RNA helicase of superfamily protein II identified by match to protein family HMM PF04851 A0QQT2 No unknown Rv2917 Rv2917 NC_008596.1 Mycobrowser_v3 CDS 951585 955409 . - 0 MSMEG_0868 MSMEG_0868 hypothetical protein identified by Glimmer2; putative A0QQT3 No unknown NC_008596.1 Mycobrowser_v3 CDS 956321 958486 . - 0 MSMEG_0870 MSMEG_0870 oxidoreductase identified by match to protein family HMM PF01315; match to protein family HMM PF02738 A0QQT5 No unknown NC_008596.1 Mycobrowser_v3 CDS 973419 973982 . + 0 MSMEG_0888 MSMEG_0888 conserved hypothetical protein A0QQV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 958483 959457 . - 0 MSMEG_0871 MSMEG_0871 putative aldehyde or xanthine dehydrogenase, molybdopterin binding subunit protein identified by match to protein family HMM PF00941 A0QQT6 No unknown NC_008596.1 Mycobrowser_v3 CDS 959461 960078 . - 0 MSMEG_0872 MSMEG_0872 twin-arginine translocation pathway signal identified by match to protein family HMM PF00111; match to protein family HMM PF01799 A0QQT7 No unknown NC_008596.1 Mycobrowser_v3 CDS 960209 960379 . - 0 MSMEG_0873 MSMEG_0873 hypothetical protein identified by Glimmer2; putative A0QQT8 No unknown NC_008596.1 Mycobrowser_v3 CDS 960615 961319 . + 0 MSMEG_0874 MSMEG_0874 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QQT9 No unknown NC_008596.1 Mycobrowser_v3 CDS 961391 962794 . + 0 MSMEG_0875 MSMEG_0875 putative sialic acid transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QQU0 No unknown NC_008596.1 Mycobrowser_v3 CDS 962791 963723 . + 0 MSMEG_0877 MSMEG_0877 dihydrodipicolinate synthase identified by match to protein family HMM PF00701 A0QQU1 No unknown NC_008596.1 Mycobrowser_v3 CDS 963720 964637 . - 0 MSMEG_0876 MSMEG_0876 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QQU2 No unknown Rv0068 Rv0068 NC_008596.1 Mycobrowser_v3 CDS 964736 965305 . + 0 MSMEG_0878 MSMEG_0878 transcriptional regulator identified by match to protein family HMM PF00440 A0QQU3 No unknown Rv0067c Rv0067c NC_008596.1 Mycobrowser_v3 CDS 965380 965526 . - 0 MSMEG_0879 MSMEG_0879 hypothetical protein identified by Glimmer2; putative A0QQU4 No unknown NC_008596.1 Mycobrowser_v3 CDS 967303 968136 . + 0 MSMEG_0881 MSMEG_0881 conserved hypothetical protein A0QQU6 No unknown NC_008596.1 Mycobrowser_v3 CDS 968200 968583 . - 0 MSMEG_0882 MSMEG_0882 conserved hypothetical protein A0QQU7 No unknown Rv0441c Rv0441c NC_008596.1 Mycobrowser_v3 CDS 968609 970351 . - 0 MSMEG_0883 MSMEG_0883 amidohydrolase family protein identified by match to protein family HMM PF07908; match to protein family HMM PF07969 A0QQU8 No unknown NC_008596.1 Mycobrowser_v3 CDS 970433 970813 . + 0 MSMEG_0884 MSMEG_0884 glyoxalase family protein identified by match to protein family HMM PF00903 A0QQU9 No unknown NC_008596.1 Mycobrowser_v3 CDS 970817 971320 . - 0 MSMEG_0885 MSMEG_0885 conserved hypothetical protein A0QQV0 No unknown NC_008596.1 Mycobrowser_v3 CDS 971320 972810 . - 0 MSMEG_0886 MSMEG_0886 serine/threonine-protein kinase PknD identified by match to protein family HMM PF00069 A0QQV1 No unknown NC_008596.1 Mycobrowser_v3 CDS 972865 973422 . + 0 MSMEG_0887 MSMEG_0887 conserved hypothetical protein A0QQV2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3874246 3874500 . + 0 MSMEG_3804 MSMEG_3804 conserved hypothetical protein A0QYV9 No unknown Rv1638A Rv1638A NC_008596.1 Mycobrowser_v3 CDS 973997 975526 . + 0 MSMEG_0889 MSMEG_0889 succinic semialdehyde dehydrogenase identified by match to protein family HMM PF00171 A0QQV4 No unknown NC_008596.1 Mycobrowser_v3 CDS 975595 976194 . + 0 MSMEG_0890 MSMEG_0890 HD domain protein identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277 A0QQV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 976256 977107 . + 0 MSMEG_0891 MSMEG_0891 polyphosphate kinase 2 identified by match to protein family HMM PF03976 A0QQV6 No unknown NC_008596.1 Mycobrowser_v3 CDS 978540 979904 . + 0 MSMEG_0894 MSMEG_0894 dihydrodipicolinate reductase identified by match to protein family HMM PF01408; match to protein family HMM PF03447 A0QQV9 No unknown NC_008596.1 Mycobrowser_v3 CDS 980004 980747 . + 0 MSMEG_0895 MSMEG_0895 bacterial regulatory protein, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QQW0 No unknown NC_008596.1 Mycobrowser_v3 CDS 980820 982190 . + 0 MSMEG_0896 MSMEG_0896 integral membrane transport protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QQW1 No unknown NC_008596.1 Mycobrowser_v3 CDS 982187 983464 . + 0 MSMEG_0897 MSMEG_0897 conserved hypothetical protein A0QQW2 No unknown NC_008596.1 Mycobrowser_v3 CDS 983461 984273 . + 0 MSMEG_0898 MSMEG_0898 tagatose-1,6-bisphosphate aldolase GatY identified by match to protein family HMM PF01116 A0QQW3 No unknown NC_008596.1 Mycobrowser_v3 CDS 996618 997478 . + 0 MSMEG_0912 MSMEG_0912 3-hydroxybutyryl-CoA dehydrogenase identified by match to protein family HMM PF00725; match to protein family HMM PF02737 A0QQX7 No unknown Rv0468 Rv0468 NC_008596.1 Mycobrowser_v3 CDS 1436204 1436371 . + 0 MSMEG_1339 rpmG ribosomal protein L33 identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023 A0QS39 No unknown Rv0634A Rv0634A NC_008596.1 Mycobrowser_v3 CDS 984361 986376 . - 0 MSMEG_0899 MSMEG_0899 prolyl oligopeptidase family protein identified by match to protein family HMM PF00326; match to protein family HMM PF02897 A0QQW4 No unknown Rv0457c Rv0457c NC_008596.1 Mycobrowser_v3 CDS 986441 987964 . + 0 MSMEG_0900 MSMEG_0900 eptc-inducible aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0QQW5 No unknown NC_008596.1 Mycobrowser_v3 CDS 987998 988474 . + 0 MSMEG_0901 MSMEG_0901 conserved hypothetical protein identified by match to protein family HMM PF05610 A0QQW6 No unknown Rv0459 Rv0459 NC_008596.1 Mycobrowser_v3 CDS 1015072 1015569 . + 0 MSMEG_0934 MSMEG_0934 conserved hypothetical protein A0QQZ9 No unknown Rv0487 Rv0487 NC_008596.1 Mycobrowser_v3 CDS 988475 989344 . - 0 MSMEG_0902 MSMEG_0902 cyclopropane-fatty-acyl-phospholipid synthase 1 identified by match to protein family HMM PF02353 A0QQW7 No unknown Rv3392c Rv3392c NC_008596.1 Mycobrowser_v3 CDS 989521 990915 . + 0 MSMEG_0903 lpdA dihydrolipoamide dehydrogenase identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350 A0QQW8 No unknown Rv0462 Rv0462 NC_008596.1 Mycobrowser_v3 CDS 991776 993212 . - 0 MSMEG_0906 MSMEG_0906 DNA-binding protein identified by match to protein family HMM PF01381; match to protein family HMM PF06114 A0QQX1 No unknown Rv0465c Rv0465c NC_008596.1 Mycobrowser_v3 CDS 993284 993628 . + 0 MSMEG_0907 MSMEG_0907 conserved hypothetical protein A0QQX2 No unknown NC_008596.1 Mycobrowser_v3 CDS 993604 994002 . + 0 MSMEG_0908 MSMEG_0908 hypothetical protein identified by Glimmer2; putative A0QQX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 994104 994952 . + 0 MSMEG_0909 MSMEG_0909 acyl-ACP thioesterase superfamily protein identified by match to protein family HMM PF01643 A0QQX4 No unknown Rv0466 Rv0466 NC_008596.1 Mycobrowser_v3 CDS 995033 995167 . - 0 MSMEG_0910 MSMEG_0910 hypothetical protein identified by Glimmer2; putative A0QQX5 No unknown NC_008596.1 Mycobrowser_v3 CDS 995201 996487 . + 0 MSMEG_0911 aceA isocitrate lyase identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346 A0QQX6 No unknown Rv0467 Rv0467 NC_008596.1 Mycobrowser_v3 CDS 1093372 1093515 . + 0 MSMEG_1024 MSMEG_1024 hypothetical protein identified by Glimmer2; putative A0QR85 No unknown NC_008596.1 Mycobrowser_v3 CDS 997643 998515 . + 0 MSMEG_0913 MSMEG_0913 methoxy mycolic acid synthase 1 identified by match to protein family HMM PF02353 A0QQX8 No unknown Rv0469 Rv0469 NC_008596.1 Mycobrowser_v3 CDS 998555 999427 . - 0 MSMEG_0914 MSMEG_0914 conserved hypothetical protein A0QQX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 999537 1000424 . - 0 MSMEG_0915 MSMEG_0915 polyphosphate kinase 2 superfamily protein identified by match to protein family HMM PF03976 A0QQY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1000429 1001133 . - 0 MSMEG_0916 MSMEG_0916 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QQY1 No unknown Rv0472c Rv0472c NC_008596.1 Mycobrowser_v3 CDS 1015609 1016352 . + 0 MSMEG_0935 MSMEG_0935 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258 A0QR00 No unknown Rv0489 Rv0489 NC_008596.1 Mycobrowser_v3 CDS 1001253 1002569 . + 0 MSMEG_0917 MSMEG_0917 conserved hypothetical protein identified by match to protein family HMM PF04286 A0QQY2 No unknown Rv0473 Rv0473 NC_008596.1 Mycobrowser_v3 CDS 1002657 1003085 . + 0 MSMEG_0918 MSMEG_0918 transcriptional regulator, XRE family protein identified by match to protein family HMM PF01381 A0QQY3 No unknown Rv0474 Rv0474 NC_008596.1 Mycobrowser_v3 CDS 1003169 1003867 . + 0 MSMEG_0919 MSMEG_0919 heparin-binding hemagglutinin Q3I5Q7 No unknown Rv0475 Rv0475 NC_008596.1 Mycobrowser_v3 CDS 1003944 1004228 . + 0 MSMEG_0920 MSMEG_0920 conserved hypothetical protein A0QQY5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1004242 1004646 . + 0 MSMEG_0921 MSMEG_0921 conserved hypothetical protein A0QQY6 No unknown Rv0477 Rv0477 NC_008596.1 Mycobrowser_v3 CDS 1004646 1005329 . + 0 MSMEG_0922 deoC deoxyribose-phosphate aldolase identified by match to protein family HMM PF01791; match to protein family HMM TIGR00126 A0QQY7 No unknown Rv0478 Rv0478 NC_008596.1 Mycobrowser_v3 CDS 1005367 1006302 . - 0 MSMEG_0923 MSMEG_0923 conserved hypothetical protein A0QQY8 No unknown Rv0479c Rv0479c NC_008596.1 Mycobrowser_v3 CDS 1006363 1007163 . - 0 MSMEG_0924 MSMEG_0924 hydrolase, carbon-nitrogen family protein identified by match to protein family HMM PF00795 A0QQY9 No unknown Rv0480c Rv0480c NC_008596.1 Mycobrowser_v3 CDS 1007170 1007946 . - 0 MSMEG_0925 MSMEG_0925 conserved hypothetical protein A0QQZ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1007951 1008442 . - 0 MSMEG_0926 MSMEG_0926 conserved hypothetical protein A0QQZ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1008489 1008995 . - 0 MSMEG_0927 MSMEG_0927 conserved hypothetical protein A0QQZ2 No unknown Rv0481c Rv0481c NC_008596.1 Mycobrowser_v3 CDS 1009022 1010113 . + 0 MSMEG_0928 murB UDP-N-acetylenolpyruvoylglucosamine reductase identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179 A0QQZ3 No unknown Rv0482 Rv0482 NC_008596.1 Mycobrowser_v3 CDS 1010120 1011478 . + 0 MSMEG_0929 MSMEG_0929 ErfK/YbiS/YcfS/YnhG family protein identified by match to protein family HMM PF03734 A0QQZ4 No unknown Rv0483 Rv0483 NC_008596.1 Mycobrowser_v3 CDS 1011488 1012237 . - 0 MSMEG_0930 MSMEG_0930 serine 3-dehydrogenase identified by match to protein family HMM PF00106 A0QQZ5 No unknown Rv0484c Rv0484c NC_008596.1 Mycobrowser_v3 CDS 1012270 1012557 . - 0 MSMEG_0931 MSMEG_0931 hypothetical protein identified by Glimmer2; putative A0QQZ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1012561 1013760 . + 0 MSMEG_0932 MSMEG_0932 ROK family protein identified by match to protein family HMM PF00480 A0QQZ7 No unknown Rv0485 Rv0485 NC_008596.1 Mycobrowser_v3 CDS 1013771 1015075 . + 0 MSMEG_0933 MSMEG_0933 conserved hypothetical protein identified by match to protein family HMM PF00534 A0QQZ8 No unknown Rv0486 Rv0486 NC_008596.1 Mycobrowser_v3 CDS 1016604 1017758 . + 0 MSMEG_0936 senX3 sensor histidine kinase SenX3 identified by similarity to SP:P23545; match to protein family HMM PF00512; match to protein family HMM PF02518 A0QR01 No unknown Rv0490 Rv0490 NC_008596.1 Mycobrowser_v3 CDS 1017764 1018441 . + 0 MSMEG_0937 regX3 DNA-binding response regulator RegX3 identified by similarity to SP:Q50447; match to protein family HMM PF00072; match to protein family HMM PF00486 Q9F868 No unknown Rv0491 Rv0491 NC_008596.1 Mycobrowser_v3 CDS 1018465 1019265 . - 0 MSMEG_0938 MSMEG_0938 conserved hypothetical protein A0QR03 No unknown Rv0495c Rv0495c NC_008596.1 Mycobrowser_v3 CDS 1019379 1020338 . + 0 MSMEG_0939 MSMEG_0939 Ppx/GppA phosphatase family protein identified by match to protein family HMM PF02541 A0QR04 No unknown Rv0496 Rv0496 NC_008596.1 Mycobrowser_v3 CDS 1020368 1021438 . + 0 MSMEG_0940 MSMEG_0940 conserved hypothetical protein A0QR05 No unknown Rv0497 Rv0497 NC_008596.1 Mycobrowser_v3 CDS 1021461 1022306 . + 0 MSMEG_0941 MSMEG_0941 AP endonuclease, family protein 2 identified by match to protein family HMM PF01261 A0QR06 No unknown Rv0498 Rv0498 NC_008596.1 Mycobrowser_v3 CDS 1022339 1023154 . + 0 MSMEG_0942 MSMEG_0942 conserved hypothetical protein A0QR07 No unknown Rv0499 Rv0499 NC_008596.1 Mycobrowser_v3 CDS 1023180 1024040 . + 0 MSMEG_0943 proC pyrroline-5-carboxylate reductase identified by match to protein family HMM PF03807; match to protein family HMM TIGR00112 A0QR08 No unknown Rv0500 Rv0500 NC_008596.1 Mycobrowser_v3 CDS 1024188 1024406 . + 0 MSMEG_0944 MSMEG_0944 DNA binding domain, excisionase family protein identified by match to protein family HMM TIGR01764 A0QR09 No unknown NC_008596.1 Mycobrowser_v3 CDS 1024591 1024692 . + 0 MSMEG_0945 MSMEG_0945 conserved domain protein identified by match to protein family HMM PF08213 A0QR10 No unknown NC_008596.1 Mycobrowser_v3 CDS 1024821 1025849 . + 0 MSMEG_0946 MSMEG_0946 NAD dependent epimerase/dehydratase family protein identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993 A0QR11 No unknown Rv0501 Rv0501 NC_008596.1 Mycobrowser_v3 CDS 1025886 1026950 . + 0 MSMEG_0947 MSMEG_0947 acyltransferase identified by match to protein family HMM PF01553 A0QR12 No unknown Rv0502 Rv0502 NC_008596.1 Mycobrowser_v3 CDS 1026981 1027514 . - 0 MSMEG_0948 MSMEG_0948 conserved hypothetical protein A0QR13 No unknown NC_008596.1 Mycobrowser_v3 CDS 1027603 1028493 . - 0 MSMEG_0949 MSMEG_0949 HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490 A0QR14 No unknown Rv0505c Rv0505c NC_008596.1 Mycobrowser_v3 CDS 1028516 1028839 . - 0 MSMEG_0950 MSMEG_0950 hypothetical protein identified by Glimmer2; putative A0QR15 No unknown NC_008596.1 Mycobrowser_v3 CDS 1028600 1028842 . + 0 MSMEG_0951 MSMEG_0951 glutaredoxin 2 identified by match to protein family HMM PF05768 A0QR16 No unknown Rv0508 Rv0508 NC_008596.1 Mycobrowser_v3 CDS 1459265 1459657 . + 0 MSMEG_1365 rplL ribosomal protein L7/L12 identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855 A0QS63 No unknown Rv0652 Rv0652 NC_008596.1 Mycobrowser_v3 CDS 1029002 1030357 . + 0 MSMEG_0952 hemA glutamyl-tRNA reductase identified by match to protein family HMM PF00745; match to protein family HMM PF01488; match to protein family HMM PF05201; match to protein family HMM TIGR01035 A0QR17 No unknown Rv0509 Rv0509 NC_008596.1 Mycobrowser_v3 CDS 1030361 1031317 . + 0 MSMEG_0953 hemC porphobilinogen deaminase identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212 A0QR18 No unknown Rv0510 Rv0510 NC_008596.1 Mycobrowser_v3 CDS 1031413 1033245 . + 0 MSMEG_0954 hemD uroporphyrinogen-III synthase identified by match to protein family HMM PF00590; match to protein family HMM PF02602 A0QR19 No unknown NC_008596.1 Mycobrowser_v3 CDS 1033330 1034310 . + 0 MSMEG_0956 hemB delta-aminolevulinic acid dehydratase identified by match to protein family HMM PF00490 A0QR20 No unknown Rv0512 Rv0512 NC_008596.1 Mycobrowser_v3 CDS 1034274 1034771 . - 0 MSMEG_0955 MSMEG_0955 hypothetical protein identified by Glimmer2; putative A0QR21 No unknown NC_008596.1 Mycobrowser_v3 CDS 1034307 1034738 . + 0 MSMEG_0957 MSMEG_0957 hypothetical protein identified by Glimmer2; putative A0QR22 No unknown NC_008596.1 Mycobrowser_v3 CDS 1034759 1035154 . + 0 MSMEG_0958 MSMEG_0958 hypothetical protein identified by Glimmer2; putative A0QR23 No unknown NC_008596.1 Mycobrowser_v3 CDS 1035189 1035683 . + 0 MSMEG_0959 MSMEG_0959 putative conserved transmembrane protein A0QR24 No unknown Rv0513 Rv0513 NC_008596.1 Mycobrowser_v3 CDS 1035680 1035910 . + 0 MSMEG_0960 MSMEG_0960 putative transmembrane protein A0QR25 No unknown Rv0514 Rv0514 NC_008596.1 Mycobrowser_v3 CDS 1036854 1037447 . + 0 MSMEG_0962 MSMEG_0962 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QR26 No unknown NC_008596.1 Mycobrowser_v3 CDS 1037522 1037764 . + 0 MSMEG_0963 MSMEG_0963 hypothetical protein identified by Glimmer2; putative A0QR27 No unknown NC_008596.1 Mycobrowser_v3 CDS 1037801 1038283 . + 0 MSMEG_0964 MSMEG_0964 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0QR28 No unknown NC_008596.1 Mycobrowser_v3 CDS 1038908 1039543 . + 0 MSMEG_0965 MSMEG_0965 porin A0QR29 No unknown NC_008596.1 Mycobrowser_v3 CDS 1039684 1040067 . - 0 MSMEG_0966 MSMEG_0966 conserved hypothetical protein identified by match to protein family HMM TIGR00026 A0QR30 No unknown NC_008596.1 Mycobrowser_v3 CDS 1040090 1040470 . - 0 MSMEG_0967 MSMEG_0967 conserved hypothetical protein identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0QR31 No unknown NC_008596.1 Mycobrowser_v3 CDS 1040556 1042010 . + 0 MSMEG_0968 MSMEG_0968 cytochrome P450 identified by match to protein family HMM PF00067 A0QR32 No unknown NC_008596.1 Mycobrowser_v3 CDS 1068322 1069431 . + 0 MSMEG_0998 MSMEG_0998 oxidoreductase, molybdopterin binding identified by match to protein family HMM PF00174 A0QR62 No unknown Rv0218 Rv0218 NC_008596.1 Mycobrowser_v3 CDS 1042040 1043395 . + 0 MSMEG_0969 hemL glutamate-1-semialdehyde-2,1-aminomutase identified by match to protein family HMM PF00155; match to protein family HMM PF00202; match to protein family HMM TIGR00713 A0QR33 No unknown Rv0524 Rv0524 NC_008596.1 Mycobrowser_v3 CDS 1043446 1044054 . + 0 MSMEG_0970 MSMEG_0970 phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 A0QR34 No unknown Rv0525 Rv0525 NC_008596.1 Mycobrowser_v3 CDS 1044704 1045489 . + 0 MSMEG_0972 MSMEG_0972 cytochrome C biogenesis protein transmembrane region identified by match to protein family HMM PF02683 A0QR36 No unknown Rv0527 Rv0527 NC_008596.1 Mycobrowser_v3 CDS 1045489 1047138 . + 0 MSMEG_0973 MSMEG_0973 conserved membrane protein identified by match to protein family HMM PF05140 A0QR37 No unknown Rv0528 Rv0528 NC_008596.1 Mycobrowser_v3 CDS 1047135 1048130 . + 0 MSMEG_0974 ccsB cytochrome c-type biogenesis protein CcsB identified by match to protein family HMM PF01578; match to protein family HMM TIGR03144 A0QR38 No unknown Rv0529 Rv0529 NC_008596.1 Mycobrowser_v3 CDS 1048209 1049537 . + 0 MSMEG_0975 MSMEG_0975 conserved hypothetical protein A0QR39 No unknown Rv0530 Rv0530 NC_008596.1 Mycobrowser_v3 CDS 1049555 1049719 . - 0 MSMEG_0976 MSMEG_0976 conserved hypothetical protein A0QR40 No unknown NC_008596.1 Mycobrowser_v3 CDS 1049796 1050068 . + 0 MSMEG_0977 MSMEG_0977 conserved hypothetical protein A0QR41 No unknown Rv0531 Rv0531 NC_008596.1 Mycobrowser_v3 CDS 1050065 1051105 . + 0 MSMEG_0978 MSMEG_0978 aminotransferase, class V superfamily protein identified by match to protein family HMM PF00266 A0QR42 No unknown NC_008596.1 Mycobrowser_v3 CDS 1051203 1051451 . + 0 MSMEG_0979 MSMEG_0979 keratin associated protein A0QR43 No unknown NC_008596.1 Mycobrowser_v3 CDS 1051528 1053159 . - 0 MSMEG_0980 MSMEG_0980 signal transduction histidine kinase identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730 A0QR44 No unknown NC_008596.1 Mycobrowser_v3 CDS 1053329 1053688 . + 0 MSMEG_0981 MSMEG_0981 two-component system regulator identified by match to protein family HMM PF00072 A0QR45 No unknown NC_008596.1 Mycobrowser_v3 CDS 1053805 1054854 . + 0 MSMEG_0982 MSMEG_0982 immunogenic protein identified by match to protein family HMM TIGR02122 A0QR46 No unknown NC_008596.1 Mycobrowser_v3 CDS 1069356 1069922 . + 0 MSMEG_1000 MSMEG_1000 hypothetical protein identified by Glimmer2; putative A0QR63 No unknown NC_008596.1 Mycobrowser_v3 CDS 1458668 1459195 . + 0 MSMEG_1364 MSMEG_1364 50S ribosomal protein L10 identified by match to protein family HMM PF00466 A0QS62 No unknown Rv0651 Rv0651 NC_008596.1 Mycobrowser_v3 CDS 1054857 1056935 . + 0 MSMEG_0984 MSMEG_0984 trap transporter, 4tm/12tm fusion protein identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM TIGR02123 A0QR47 No unknown NC_008596.1 Mycobrowser_v3 CDS 1085358 1085972 . - 0 MSMEG_1015 MSMEG_1015 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QR78 No unknown NC_008596.1 Mycobrowser_v3 CDS 1056913 1057566 . - 0 MSMEG_0983 MSMEG_0983 two-component system response regulator identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0QR48 No unknown NC_008596.1 Mycobrowser_v3 CDS 1057684 1059033 . - 0 MSMEG_0985 MSMEG_0985 sugar transporter family protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QR49 No unknown Rv3476c Rv3476c NC_008596.1 Mycobrowser_v3 CDS 1059121 1059849 . - 0 MSMEG_0986 MSMEG_0986 RemM protein identified by match to protein family HMM PF00440 A0QR50 No unknown NC_008596.1 Mycobrowser_v3 CDS 1059955 1060326 . + 0 MSMEG_0987 MSMEG_0987 hypothetical protein identified by Glimmer2; putative A0QR51 No unknown NC_008596.1 Mycobrowser_v3 CDS 1060331 1061200 . - 0 MSMEG_0988 menA 1,4-dihydroxy-2-naphthoate octaprenyltransferase identified by match to protein family HMM PF01040; match to protein family HMM TIGR00751 A0QR52 No unknown Rv0534c Rv0534c NC_008596.1 Mycobrowser_v3 CDS 1061291 1061536 . + 0 MSMEG_0989 MSMEG_0989 conserved hypothetical protein A0QR53 No unknown NC_008596.1 Mycobrowser_v3 CDS 1061533 1062312 . + 0 MSMEG_0990 mtaP methylthioadenosine phosphorylase identified by match to protein family HMM PF00896; match to protein family HMM TIGR01694 A0QR54 No unknown Rv0535 Rv0535 NC_008596.1 Mycobrowser_v3 CDS 1436382 1436858 . + 0 MSMEG_1340 MSMEG_1340 conserved hypothetical protein A0QS40 No unknown Rv0635 Rv0635 NC_008596.1 Mycobrowser_v3 CDS 1062309 1063349 . + 0 MSMEG_0991 MSMEG_0991 NAD-dependent epimerase/dehydratase identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993 A0QR55 No unknown Rv0536 Rv0536 NC_008596.1 Mycobrowser_v3 CDS 1063406 1064533 . + 0 MSMEG_0992 MSMEG_0992 2-nitropropane dioxygenase, NPD identified by match to protein family HMM PF03060 A0QR56 No unknown Rv1533 Rv1533 NC_008596.1 Mycobrowser_v3 CDS 1064543 1065556 . - 0 MSMEG_0993 MSMEG_0993 histidine kinase identified by match to protein family HMM PF00512; match to protein family HMM PF02518 A0QR57 No unknown NC_008596.1 Mycobrowser_v3 CDS 1065553 1066230 . - 0 MSMEG_0994 resD DNA-binding response regulator ResD identified by similarity to SP:P35163; match to protein family HMM PF00072; match to protein family HMM PF00486 A0QR58 No unknown NC_008596.1 Mycobrowser_v3 CDS 1066335 1066994 . + 0 MSMEG_0995 MSMEG_0995 glycosyl transferase, family protein 2 identified by match to protein family HMM PF00535 A0QR59 No unknown Rv0539 Rv0539 NC_008596.1 Mycobrowser_v3 CDS 1066994 1067647 . + 0 MSMEG_0996 MSMEG_0996 conserved hypothetical protein A0QR60 No unknown Rv0540 Rv0540 NC_008596.1 Mycobrowser_v3 CDS 1067651 1068280 . + 0 MSMEG_0997 MSMEG_0997 conserved hypothetical protein A0QR61 No unknown NC_008596.1 Mycobrowser_v3 CDS 1084283 1085353 . - 0 MSMEG_1014 dinB DNA polymerase IV identified by match to protein family HMM PF00817 A0QR77 No unknown NC_008596.1 Mycobrowser_v3 CDS 1069848 1071212 . - 0 MSMEG_0999 MSMEG_0999 integral membrane protein A0QR64 No unknown Rv0541c Rv0541c NC_008596.1 Mycobrowser_v3 CDS 1071264 1072121 . + 0 MSMEG_1001 MSMEG_1001 acetyltransferase, gnat family protein, putative identified by match to protein family HMM PF00583 A0QR65 No unknown NC_008596.1 Mycobrowser_v3 CDS 1072393 1073094 . + 0 MSMEG_1002 MSMEG_1002 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1073102 1074424 . - 0 MSMEG_1003 MSMEG_1003 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1074818 1075633 . + 0 MSMEG_1005 MSMEG_1005 methyltransferase type 11 identified by match to protein family HMM PF01170 A0QR68 No unknown NC_008596.1 Mycobrowser_v3 CDS 1075656 1076717 . + 0 MSMEG_1006 MSMEG_1006 aminoglycoside phosphotransferase identified by match to protein family HMM PF01636 A0QR69 No unknown NC_008596.1 Mycobrowser_v3 CDS 1076746 1077507 . - 0 MSMEG_1007 MSMEG_1007 transport protein identified by match to protein family HMM PF01925 A0QR70 No unknown NC_008596.1 Mycobrowser_v3 CDS 1077699 1078190 . + 0 MSMEG_1008 MSMEG_1008 conserved hypothetical protein A0QR71 No unknown NC_008596.1 Mycobrowser_v3 CDS 1998180 1998401 . + 0 MSMEG_1917 MSMEG_1917 conserved domain protein identified by match to protein family HMM PF00364 Q9XCD6 No unknown Rv3221c Rv3221c NC_008596.1 Mycobrowser_v3 CDS 1078286 1079770 . - 0 MSMEG_1009 MSMEG_1009 cytochrome p450 identified by match to protein family HMM PF00067 A0QR72 No unknown NC_008596.1 Mycobrowser_v3 CDS 1079902 1080561 . + 0 MSMEG_1010 MSMEG_1010 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QR73 No unknown NC_008596.1 Mycobrowser_v3 CDS 1080585 1081448 . + 0 MSMEG_1011 MSMEG_1011 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QR74 No unknown NC_008596.1 Mycobrowser_v3 CDS 1081451 1082986 . - 0 MSMEG_1012 MSMEG_1012 alkaline phosphatase identified by match to protein family HMM PF00245 A0QR75 No unknown NC_008596.1 Mycobrowser_v3 CDS 1083088 1084272 . - 0 MSMEG_1013 MSMEG_1013 conserved hypothetical protein A0QR76 No unknown NC_008596.1 Mycobrowser_v3 CDS 1147565 1147696 . - 0 MSMEG_1083 MSMEG_1083 hypothetical protein identified by Glimmer2; putative A0QRE1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1086080 1086643 . + 0 MSMEG_1016 MSMEG_1016 secreted protein identified by match to protein family HMM PF02525; match to protein family HMM PF03358 A0QR79 No unknown NC_008596.1 Mycobrowser_v3 CDS 1087117 1087356 . + 0 MSMEG_1017 MSMEG_1017 glutaredoxin identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194 A0QR80 No unknown NC_008596.1 Mycobrowser_v3 CDS 1164280 1165446 . + 0 MSMEG_1101 MSMEG_1101 hypothetical protein identified by Glimmer2; putative A0QRF8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1087851 1089971 . + 0 MSMEG_1019 MSMEG_1019 ribonucleoside-diphosphate reductase, alpha subunit identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR02506 A0QR81,P0CG99 No unknown NC_008596.1 Mycobrowser_v3 CDS 1091275 1091694 . - 0 MSMEG_1021 MSMEG_1021 glyoxalase/bleomycin resistance protein/dioxygenase identified by match to protein family HMM PF00903 A0QR82 No unknown NC_008596.1 Mycobrowser_v3 CDS 1091864 1092091 . - 0 MSMEG_1022 MSMEG_1022 conserved hypothetical protein A0QR83 No unknown NC_008596.1 Mycobrowser_v3 CDS 1091966 1093375 . + 0 MSMEG_1023 MSMEG_1023 integral membrane transporter identified by match to protein family HMM PF07690 A0QR84 No unknown NC_008596.1 Mycobrowser_v3 CDS 1093566 1094417 . + 0 MSMEG_1026 MSMEG_1026 putative acetyltransferase identified by match to protein family HMM PF00583 A0QR86 No unknown NC_008596.1 Mycobrowser_v3 CDS 1094389 1094964 . - 0 MSMEG_1025 MSMEG_1025 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QR87 No unknown NC_008596.1 Mycobrowser_v3 CDS 1095088 1095966 . + 0 MSMEG_1027 MSMEG_1027 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QR88 No unknown NC_008596.1 Mycobrowser_v3 CDS 1096036 1097223 . - 0 MSMEG_1028 MSMEG_1028 geranylgeranyl reductase identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM TIGR02032 A0QR89 No unknown NC_008596.1 Mycobrowser_v3 CDS 1097374 1098111 . + 0 MSMEG_1029 MSMEG_1029 probable transcriptional regulatory protein identified by match to protein family HMM PF00440 A0QR90 No unknown NC_008596.1 Mycobrowser_v3 CDS 1098227 1099726 . + 0 MSMEG_1030 MSMEG_1030 monooxygenase A0QR91 No unknown NC_008596.1 Mycobrowser_v3 CDS 1099821 1100336 . + 0 MSMEG_1031 MSMEG_1031 conserved hypothetical protein A0QR92 No unknown NC_008596.1 Mycobrowser_v3 CDS 1100390 1100539 . + 0 MSMEG_1032 MSMEG_1032 hypothetical protein identified by Glimmer2; putative A0QR93 No unknown NC_008596.1 Mycobrowser_v3 CDS 1100553 1101527 . + 0 MSMEG_1033 MSMEG_1033 ribonucleoside-diphosphate reductase, beta subunit identified by match to protein family HMM PF00268 A0QR94 No unknown NC_008596.1 Mycobrowser_v3 CDS 1197841 1198365 . + 0 MSMEG_1136 MSMEG_1136 conserved hypothetical protein A0QRJ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1542299 1542595 . + 0 MSMEG_1445 MSMEG_1445 30S ribosomal protein S17 identified by match to protein family HMM PF00366 A0QSE0 No unknown Rv0710 Rv0710 NC_008596.1 Mycobrowser_v3 CDS 1101597 1102979 . + 0 MSMEG_1034 MSMEG_1034 putative esterase family protein identified by match to protein family HMM PF00756 A0QR95 No unknown NC_008596.1 Mycobrowser_v3 CDS 1102979 1104559 . + 0 MSMEG_1035 MSMEG_1035 conserved hypothetical protein A0QR96 No unknown NC_008596.1 Mycobrowser_v3 CDS 1106170 1107219 . - 0 MSMEG_1037 MSMEG_1037 alcohol dehydrogenase, zinc-containing identified by match to protein family HMM PF00107 A0QR97,P0CH36 No unknown NC_008596.1 Mycobrowser_v3 CDS 1107407 1107682 . - 0 MSMEG_1038 MSMEG_1038 GTP cyclohydrolase II identified by match to protein family HMM PF03795 A0QR98 No unknown NC_008596.1 Mycobrowser_v3 CDS 1436845 1437273 . + 0 MSMEG_1341 MSMEG_1341 MaoC family protein identified by match to protein family HMM PF01575 A0QS41 No unknown Rv0636 Rv0636 NC_008596.1 Mycobrowser_v3 CDS 1107692 1108765 . - 0 MSMEG_1039 MSMEG_1039 Periplasmic binding protein identified by match to protein family HMM PF01497 A0QR99 No unknown NC_008596.1 Mycobrowser_v3 CDS 1110747 1111988 . + 0 MSMEG_1041 serB phosphoserine phosphatase identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488 A0QRA0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1112116 1112409 . + 0 MSMEG_1042 MSMEG_1042 hypothetical protein identified by Glimmer2; putative A0QRA1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1112411 1113850 . - 0 MSMEG_1043 MSMEG_1043 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00155; match to protein family HMM PF00392 A0QRA2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1113914 1114060 . + 0 MSMEG_1044 MSMEG_1044 hypothetical protein identified by Glimmer2; putative A0QRA3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1114057 1114752 . + 0 MSMEG_1045 MSMEG_1045 integral membrane protein identified by match to protein family HMM PF02588 A0QRA4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1114707 1115555 . + 0 MSMEG_1046 MSMEG_1046 ABC-type molybdenum transport system, ATPase component identified by match to protein family HMM PF00005 A0QRA5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1115548 1116369 . + 0 MSMEG_1047 MSMEG_1047 nudix hydrolase identified by match to protein family HMM PF00293 A0QRA6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1116366 1117073 . + 0 MSMEG_1048 MSMEG_1048 probable enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QRA7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1117108 1118088 . + 0 MSMEG_1049 MSMEG_1049 methyltransferase, UbiE/COQ5 family protein A0QRA8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1118097 1119260 . + 0 MSMEG_1050 MSMEG_1050 SAM-dependent methyltransferase A0QRA9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1120066 1121610 . - 0 MSMEG_1052 MSMEG_1052 amino acid carrier protein identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835 A0QRB1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1121617 1121739 . + 0 MSMEG_1054 MSMEG_1054 hypothetical protein identified by Glimmer2; putative A0QRB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1121728 1123011 . - 0 MSMEG_1053 MSMEG_1053 conserved hypothetical protein A0QRB3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1123108 1123851 . + 0 MSMEG_1055 MSMEG_1055 hexapeptide transferase family protein identified by match to protein family HMM PF00132 A0QRB4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1437283 1437792 . + 0 MSMEG_1342 MSMEG_1342 conserved hypothetical protein A0QS42 No unknown Rv0637 Rv0637 NC_008596.1 Mycobrowser_v3 CDS 1124625 1125650 . + 0 MSMEG_1057 fni isopentenyl-diphosphate delta-isomerase, type 2 identified by match to protein family HMM TIGR02151 A0QRB5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1125683 1126309 . + 0 MSMEG_1058 MSMEG_1058 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QRB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1126317 1127639 . - 0 MSMEG_1059 MSMEG_1059 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1127726 1128130 . - 0 MSMEG_1060 MSMEG_1060 putative Lsr2 protein A0QRB8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1128363 1128977 . - 0 MSMEG_1061 MSMEG_1061 phosphohydrolase identified by match to protein family HMM PF01243 A0QRB9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1129017 1130057 . - 0 MSMEG_1062 MSMEG_1062 O-succinylbenzoic acid--CoA ligase identified by match to protein family HMM PF00501 A0QRC0 No unknown Rv0542c Rv0542c NC_008596.1 Mycobrowser_v3 CDS 1130153 1130476 . - 0 MSMEG_1063 MSMEG_1063 conserved hypothetical protein A0QRC1 No unknown Rv0543c Rv0543c NC_008596.1 Mycobrowser_v3 CDS 1130758 1132014 . + 0 MSMEG_1064 MSMEG_1064 phosphate/sulphate permease identified by match to protein family HMM PF01384 A0QRC2 No unknown Rv0545c Rv0545c NC_008596.1 Mycobrowser_v3 CDS 1132030 1132308 . + 0 MSMEG_1065 MSMEG_1065 conserved hypothetical protein A0QRC3 No unknown Rv0544c Rv0544c NC_008596.1 Mycobrowser_v3 CDS 1132310 1132621 . + 0 MSMEG_1066 MSMEG_1066 conserved hypothetical protein A0QRC4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1132639 1133010 . - 0 MSMEG_1067 MSMEG_1067 conserved hypothetical protein identified by match to protein family HMM PF00903 A0QRC5 No unknown Rv0546c Rv0546c NC_008596.1 Mycobrowser_v3 CDS 1133059 1134474 . - 0 MSMEG_1068 MSMEG_1068 regulatory protein identified by match to protein family HMM PF07905 A0QRC6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1212385 1213071 . + 0 MSMEG_1149 MSMEG_1149 conserved hypothetical protein A0QRK5 No unknown Rv2390c Rv2390c NC_008596.1 Mycobrowser_v3 CDS 1134639 1136105 . + 0 MSMEG_1069 MSMEG_1069 amino acid permease-associated region identified by match to protein family HMM PF00324 A0QRC7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1136102 1136797 . + 0 MSMEG_1070 MSMEG_1070 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106 A0QRC8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1136794 1137555 . + 0 MSMEG_1071 MSMEG_1071 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106 A0QRC9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1438122 1438556 . + 0 MSMEG_1344 MSMEG_1344 translocase identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964 A0QS43 No unknown Rv0638 Rv0638 NC_008596.1 Mycobrowser_v3 CDS 1137579 1138550 . + 0 MSMEG_1072 speB agmatinase identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230 A0QRD0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1138540 1139403 . + 0 MSMEG_1074 MSMEG_1074 polysaccharide deacetylase identified by match to protein family HMM PF01522 A0QRD1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1139384 1140298 . - 0 MSMEG_1073 MSMEG_1073 oxidoreductase, short-chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0QRD2 No unknown Rv0547c Rv0547c NC_008596.1 Mycobrowser_v3 CDS 1140401 1141330 . - 0 MSMEG_1075 menB naphthoate synthase identified by match to protein family HMM PF00378; match to protein family HMM TIGR01929 A0QRD3 No unknown Rv0548c Rv0548c NC_008596.1 Mycobrowser_v3 CDS 1141429 1141704 . + 0 MSMEG_1076 MSMEG_1076 conserved hypothetical protein A0QRD4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1141706 1142155 . - 0 MSMEG_1077 MSMEG_1077 conserved hypothetical protein identified by match to protein family HMM TIGR00026 A0QRD5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1142177 1142866 . - 0 MSMEG_1078 MSMEG_1078 hydrolase identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509 A0QRD6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1143028 1143432 . + 0 MSMEG_1079 MSMEG_1079 hypothetical protein identified by Glimmer2; putative A0QRD7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1143429 1145873 . + 0 MSMEG_1080 MSMEG_1080 large subunit of N,N-dimethylformamidase A0QRD8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1145899 1146657 . + 0 MSMEG_1081 MSMEG_1081 hypothetical protein identified by Glimmer2; putative A0QRD9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1146756 1147487 . + 0 MSMEG_1082 MSMEG_1082 putative response regulator identified by match to protein family HMM PF00196 A0QRE0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1161655 1163274 . - 0 MSMEG_1098 MSMEG_1098 acyl-CoA synthase identified by match to protein family HMM PF00501 A0QRF5 No unknown Rv0551c Rv0551c NC_008596.1 Mycobrowser_v3 CDS 1147718 1149322 . + 0 MSMEG_1084 MSMEG_1084 peptide/opine/nickel uptake family protein ABC transporter, periplasmic substrate-binding protein, putative identified by match to protein family HMM PF00496 A0QRE2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1149333 1150292 . + 0 MSMEG_1085 MSMEG_1085 dipeptide transport system permease protein DppB identified by match to protein family HMM PF00528 A0QRE3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2031777 2032088 . + 0 MSMEG_1953 MSMEG_1953 transcription factor WhiB identified by match to protein family HMM PF02467 A0QTT1 No unknown Rv3197A Rv3197A NC_008596.1 Mycobrowser_v3 CDS 1150289 1151224 . + 0 MSMEG_1086 MSMEG_1086 ABC transporter permease protein identified by match to protein family HMM PF00528 A0QRE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1152901 1154301 . + 0 MSMEG_1088 gatA glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit identified by match to protein family HMM PF01425 A0QRE5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1154316 1154507 . + 0 MSMEG_1089 MSMEG_1089 hypothetical protein identified by Glimmer2; putative A0QRE6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1154545 1155951 . + 0 MSMEG_1090 MSMEG_1090 amidase identified by match to protein family HMM PF01425 A0QRE7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1155953 1156411 . + 0 MSMEG_1091 MSMEG_1091 urease accessory protein UreE 1 identified by match to protein family HMM PF02814 A0QRE8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1156408 1157070 . + 0 MSMEG_1092 MSMEG_1092 urease accessory protein UreF identified by match to protein family HMM PF01730 A0QRE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1157081 1157737 . + 0 MSMEG_1093 MSMEG_1093 urease gamma/beta subunit identified by match to protein family HMM PF00547; match to protein family HMM PF00699; match to protein family HMM TIGR00192; match to protein family HMM TIGR00193 A0QRF0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1157739 1159445 . + 0 MSMEG_1094 ureC urease, alpha subunit identified by match to protein family HMM PF00449; match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR01792 A0QRF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1159442 1160059 . + 0 MSMEG_1095 ureG urease accessory protein UreG identified by match to protein family HMM PF02492; match to protein family HMM TIGR00101 A0QRF2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1160056 1160871 . + 0 MSMEG_1096 MSMEG_1096 urease accessory protein UreD, putative A0QRF3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1160901 1161584 . + 0 MSMEG_1097 MSMEG_1097 glycosyl transferase, group 2 family protein identified by match to protein family HMM PF00535 A0QRF4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1189972 1191243 . + 0 MSMEG_1129 MSMEG_1129 D-amino-acid dehydrogenase identified by match to protein family HMM PF01266 A0QRI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1165456 1167066 . + 0 MSMEG_1102 MSMEG_1102 twin-arginine translocation pathway signal identified by match to protein family HMM PF07969 A0QRF9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1167087 1168052 . + 0 MSMEG_1103 MSMEG_1103 O-succinylbenzoate synthase identified by match to protein family HMM PF01188 A0QRG0 No unknown Rv0553 Rv0553 NC_008596.1 Mycobrowser_v3 CDS 1168409 1168600 . + 0 MSMEG_1104 MSMEG_1104 hypothetical protein identified by Glimmer2; putative A0QRG1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1169847 1170854 . + 0 MSMEG_1106 MSMEG_1106 transcriptional regulator, AraC family protein identified by match to protein family HMM PF00165; match to protein family HMM PF01965 A0QRG2 No unknown Rv1931c Rv1931c NC_008596.1 Mycobrowser_v3 CDS 1170870 1171601 . + 0 MSMEG_1107 MSMEG_1107 isonitrile hydratase, putative identified by match to protein family HMM PF01965 A0QRG3 No unknown Rv1930c Rv1930c NC_008596.1 Mycobrowser_v3 CDS 1171579 1172457 . + 0 MSMEG_1108 MSMEG_1108 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0QRG4 No unknown Rv0554 Rv0554 NC_008596.1 Mycobrowser_v3 CDS 1184860 1185837 . + 0 MSMEG_1120 MSMEG_1120 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase identified by match to protein family HMM PF00795 A0QRH6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1172457 1174100 . + 0 MSMEG_1109 MSMEG_1109 2-oxoglutarate decarboxylase identified by match to protein family HMM PF02776 A0QRG5 No unknown Rv0555 Rv0555 NC_008596.1 Mycobrowser_v3 CDS 1174103 1174594 . + 0 MSMEG_1110 MSMEG_1110 probable conserved transmembrane protein A0QRG6 No unknown Rv0556 Rv0556 NC_008596.1 Mycobrowser_v3 CDS 1174598 1175296 . - 0 MSMEG_1111 MSMEG_1111 conserved hypothetical protein A0QRG7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1175363 1176490 . + 0 MSMEG_1113 MSMEG_1113 glycosyl transferase identified by match to protein family HMM PF00534 A0QRG8 No unknown Rv0557 Rv0557 NC_008596.1 Mycobrowser_v3 CDS 1191772 1192899 . + 0 MSMEG_1130 MSMEG_1130 hypothetical protein identified by Glimmer2; putative A0QRI6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1176487 1178451 . - 0 MSMEG_1112 MSMEG_1112 aconitate hydratase, putative identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01342 A0QRG9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1178579 1179403 . - 0 MSMEG_1114 MSMEG_1114 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QRH0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1179533 1180222 . + 0 MSMEG_1115 MSMEG_1115 menaquinone biosynthesis methyltransferase UbiE identified by match to protein family HMM PF01209; match to protein family HMM TIGR01934 A0QRH1 No unknown Rv0558 Rv0558 NC_008596.1 Mycobrowser_v3 CDS 1180363 1181715 . - 0 MSMEG_1116 MSMEG_1116 gamma-glutamylisopropylamide synthetase identified by match to protein family HMM PF00120 A0QRH2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1181811 1182530 . + 0 MSMEG_1117 MSMEG_1117 transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QRH3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1199825 1200961 . - 0 MSMEG_1138 MSMEG_1138 alcohol dehydrogenase 1 identified by match to protein family HMM PF00107 A0QRJ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1182618 1184153 . + 0 MSMEG_1118 MSMEG_1118 amino acid permease identified by match to protein family HMM PF00324 A0QRH4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1184153 1184869 . + 0 MSMEG_1119 MSMEG_1119 glutamine amidotransferase, class I identified by match to protein family HMM PF00117; match to protein family HMM PF07722 A0QRH5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1186442 1187440 . + 0 MSMEG_1123 MSMEG_1123 cobalamin synthesis protein identified by match to protein family HMM PF02492; match to protein family HMM PF07683 A0QRH9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1187897 1188550 . + 0 MSMEG_1125 MSMEG_1125 regulatory protein, ArsR identified by match to protein family HMM PF01726 A0QRI1 No unknown Rv2621c Rv2621c NC_008596.1 Mycobrowser_v3 CDS 1188580 1188864 . + 0 MSMEG_1126 MSMEG_1126 hypothetical protein identified by Glimmer2; putative A0QRI2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1188880 1189476 . + 0 MSMEG_1127 MSMEG_1127 probable conserved transmembrane protein A0QRI3 No unknown Rv1733c Rv1733c NC_008596.1 Mycobrowser_v3 CDS 1189652 1189771 . - 0 MSMEG_1128 MSMEG_1128 conserved hypothetical protein A0QRI4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1192990 1193475 . + 0 MSMEG_1131 MSMEG_1131 tryptophan-rich sensory protein identified by match to protein family HMM PF03073 A0QRI7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1193567 1194796 . - 0 MSMEG_1132 MSMEG_1132 FAD binding domain, putative identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF04820; match to protein family HMM PF05834; match to protein family HMM PF07992; match to protein family HMM TIGR02032 A0QRI8 No unknown Rv0561c Rv0561c NC_008596.1 Mycobrowser_v3 CDS 1194836 1195825 . + 0 MSMEG_1133 MSMEG_1133 bifunctional short chain isoprenyl diphosphate synthase identified by match to protein family HMM PF00348 A0QRI9 No unknown Rv0562 Rv0562 NC_008596.1 Mycobrowser_v3 CDS 1195912 1196799 . + 0 MSMEG_1134 MSMEG_1134 putative protease HtpX identified by match to protein family HMM PF01435 A0QRJ0 No unknown Rv0563 Rv0563 NC_008596.1 Mycobrowser_v3 CDS 1197495 1197794 . + 0 MSMEG_1135 MSMEG_1135 hypothetical protein identified by Glimmer2; putative A0QRJ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1198367 1199806 . - 0 MSMEG_1137 MSMEG_1137 amino acid permease-associated region identified by match to protein family HMM PF00324 A0QRJ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1201113 1201682 . + 0 MSMEG_1139 MSMEG_1139 transcription regulator identified by match to protein family HMM PF01381; match to protein family HMM PF07883 A0QRJ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1201699 1202724 . - 0 MSMEG_1140 MSMEG_1140 glycerol-3-phosphate dehydrogenase 2 [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2) identified by match to protein family HMM PF01210; match to protein family HMM PF03807; match to protein family HMM PF07479 A0QRJ6 No unknown Rv0564c Rv0564c NC_008596.1 Mycobrowser_v3 CDS 1203291 1204160 . + 0 MSMEG_1141 MSMEG_1141 ABC-transporter integral membrane protein identified by match to protein family HMM PF02405 A0QRJ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1204162 1205019 . + 0 MSMEG_1142 MSMEG_1142 ABC-transporter integral membrane protein identified by match to protein family HMM PF02405 A0QRJ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1205021 1206625 . + 0 MSMEG_1143 MSMEG_1143 mce related protein identified by match to protein family HMM PF02470 A0QRJ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1206622 1207677 . + 0 MSMEG_1144 MSMEG_1144 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QRK0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1285067 1285705 . + 0 MSMEG_1215 MSMEG_1215 serine/threonine-protein kinase PknE, putative A0QRR9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1207670 1208710 . + 0 MSMEG_1145 MSMEG_1145 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QRK1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1208707 1209828 . + 0 MSMEG_1146 MSMEG_1146 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QRK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1209825 1211105 . + 0 MSMEG_1147 MSMEG_1147 mce related protein identified by match to protein family HMM PF02470 A0QRK3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1211102 1212358 . + 0 MSMEG_1148 MSMEG_1148 mce related protein identified by match to protein family HMM PF02470 A0QRK4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1213041 1213862 . + 0 MSMEG_1150 MSMEG_1150 conserved hypothetical protein A0QRK6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1214090 1214695 . + 0 MSMEG_1151 MSMEG_1151 DNA-binding protein identified by match to protein family HMM PF01381; match to protein family HMM PF07883 A0QRK7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1214846 1216132 . + 0 MSMEG_1152 MSMEG_1152 citrate-proton symporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QRK8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1906855 1907319 . - 0 MSMEG_1832 MSMEG_1832 conserved hypothetical protein A0QTG4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1216141 1217541 . + 0 MSMEG_1153 MSMEG_1153 FAD dependent oxidoreductase identified by match to protein family HMM PF00890; match to protein family HMM PF01266 A0QRK9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1217538 1218719 . + 0 MSMEG_1154 MSMEG_1154 formyl-coenzyme A transferase identified by match to protein family HMM PF02515 A0QRL0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1218716 1219522 . + 0 MSMEG_1155 MSMEG_1155 carnitinyl-CoA dehydratase identified by match to protein family HMM PF00378 A0QRL1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1219519 1220406 . + 0 MSMEG_1156 MSMEG_1156 dihydrodipicolinate synthetase identified by match to protein family HMM PF00701 A0QRL2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1220407 1221180 . + 0 MSMEG_1157 MSMEG_1157 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QRL3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1221223 1222650 . + 0 MSMEG_1158 MSMEG_1158 5-oxovalerate dehydrogenase identified by match to protein family HMM PF00171 A0QRL4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1222785 1223855 . + 0 MSMEG_1159 MSMEG_1159 ABC transporter component A A0QRL5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1223852 1224655 . + 0 MSMEG_1160 MSMEG_1160 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component identified by match to protein family HMM PF00005 A0QRL6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1224687 1225493 . + 0 MSMEG_1161 MSMEG_1161 taurine transport system permease protein TauC identified by match to protein family HMM PF00528 A0QRL7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1225516 1226862 . + 0 MSMEG_1162 MSMEG_1162 nitrilotriacetate monooxygenase component A A0QRL8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1226859 1226981 . + 0 MSMEG_1163 MSMEG_1163 hypothetical protein identified by Glimmer2; putative A0QRL9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1227792 1228283 . - 0 MSMEG_1165 MSMEG_1165 conserved hypothetical protein identified by match to protein family HMM PF04461 A0QRM0 No unknown Rv0566c Rv0566c NC_008596.1 Mycobrowser_v3 CDS 1228550 1229989 . - 0 MSMEG_1167 MSMEG_1167 cytochrome P450 identified by match to protein family HMM PF00067 A0QRM1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1230134 1230784 . + 0 MSMEG_1168 MSMEG_1168 putative transcriptional regulator A0QRM2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1274296 1275219 . - 0 MSMEG_1205 MSMEG_1205 cyclopropane-fatty-acyl-phospholipid synthase 1 identified by match to protein family HMM PF02353 A0QRQ9 No unknown Rv0503c Rv0503c NC_008596.1 Mycobrowser_v3 CDS 1230896 1232140 . + 0 MSMEG_1169 MSMEG_1169 integral membrane transport protein identified by match to protein family HMM PF07690 A0QRM3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1232200 1232415 . + 0 MSMEG_1170 MSMEG_1170 conserved domain protein A0QRM4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1232517 1232927 . - 0 MSMEG_1171 MSMEG_1171 Low molecular weight phosphotyrosine protein phosphatase identified by match to protein family HMM PF01451 A0QRM5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1232924 1234000 . - 0 MSMEG_1172 arsB arsenical-resistance protein identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832 A0QRM6 No unknown Rv2643 Rv2643 NC_008596.1 Mycobrowser_v3 CDS 1233997 1234368 . - 0 MSMEG_1173 MSMEG_1173 transcriptional regulator, ArsR family protein identified by match to protein family HMM PF01022 A0QRM7 No unknown Rv2642 Rv2642 NC_008596.1 Mycobrowser_v3 CDS 1234447 1234911 . - 0 MSMEG_1174 MSMEG_1174 cadmium inducible protein cadi identified by match to protein family HMM PF00903 A0QRM8 No unknown Rv2641 Rv2641 NC_008596.1 Mycobrowser_v3 CDS 1235012 1235371 . + 0 MSMEG_1175 MSMEG_1175 putative transcriptional regulatory protein identified by match to protein family HMM PF01022 A0QRM9 No unknown Rv2640c Rv2640c NC_008596.1 Mycobrowser_v3 CDS 1235405 1236928 . + 0 MSMEG_1176 MSMEG_1176 hypothetical protein identified by Glimmer2; putative A0QRN0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1301175 1301498 . - 0 MSMEG_1230 MSMEG_1230 hypothetical protein identified by Glimmer2; putative A0QRT4 No unknown Rv2273 Rv2273 NC_008596.1 Mycobrowser_v3 CDS 1236938 1238374 . - 0 MSMEG_1177 MSMEG_1177 cytosine/purines/uracil/thiamine/allantoin permease family protein identified by match to protein family HMM PF02133 A0QRN1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1238701 1239618 . + 0 MSMEG_1178 MSMEG_1178 transcriptional regulator identified by match to protein family HMM PF01418 A0QRN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1239680 1241338 . + 0 MSMEG_1179 hutU urocanate hydratase identified by similarity to SP:P25503; match to protein family HMM PF01175; match to protein family HMM TIGR01228 A0QRN3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1241335 1242549 . + 0 MSMEG_1180 MSMEG_1180 N-carbamoyl-L-amino acid hydrolase identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879 A0QRN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1242546 1243877 . + 0 MSMEG_1181 hutF formiminoglutamate deiminase identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02022 A0QRN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1275439 1275573 . - 0 MSMEG_1206 MSMEG_1206 hypothetical protein identified by Glimmer2; putative A0QRR0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1907407 1907826 . + 0 MSMEG_1833 MSMEG_1833 conserved hypothetical protein A0QTG5 No unknown Rv3258c Rv3258c NC_008596.1 Mycobrowser_v3 CDS 1276157 1277335 . + 0 MSMEG_1207 MSMEG_1207 glycosyltransferase, group I identified by match to protein family HMM PF00534 A0QRR1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1243874 1245064 . + 0 MSMEG_1182 hutI imidazolonepropionase identified by similarity to SP:P42084; match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR01224 A0QRN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1245061 1246605 . + 0 MSMEG_1183 hutH histidine ammonia-lyase identified by similarity to EGAD:14121; match to protein family HMM PF00221; match to protein family HMM TIGR01225 A0QRN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1246704 1247582 . + 0 MSMEG_1184 MSMEG_1184 serine esterase, cutinase family protein identified by match to protein family HMM PF01083 A0QRN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1247625 1248647 . - 0 MSMEG_1185 MSMEG_1185 transcriptional regulator, AsnC family protein identified by match to protein family HMM PF01037 A0QRN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1248910 1250229 . + 0 MSMEG_1186 MSMEG_1186 putative permease identified by match to protein family HMM PF03553; match to protein family HMM PF03600 A0QRP0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1250238 1251833 . + 0 MSMEG_1187 MSMEG_1187 N-acyl-D-aspartate deacylase identified by match to protein family HMM PF01979; match to protein family HMM PF07908; match to protein family HMM PF07969 A0QRP1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1301495 1301863 . - 0 MSMEG_1231 MSMEG_1231 inner membrane protein YidH identified by match to protein family HMM PF02656 A0QRT5 No unknown Rv2272 Rv2272 NC_008596.1 Mycobrowser_v3 CDS 1251852 1253759 . - 0 MSMEG_1188 MSMEG_1188 conserved hypothetical protein A0QRP2 No unknown Rv0538 Rv0538 NC_008596.1 Mycobrowser_v3 CDS 1253948 1255630 . + 0 MSMEG_1189 MSMEG_1189 conserved hypothetical protein A0QRP3 No unknown Rv0537c Rv0537c NC_008596.1 Mycobrowser_v3 CDS 1255770 1257644 . + 0 MSMEG_1190 MSMEG_1190 serine/threonine-protein kinase PknD identified by match to protein family HMM PF00069 A0QRP4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1257700 1257921 . - 0 MSMEG_1191 MSMEG_1191 hypothetical protein identified by Glimmer2; putative A0QRP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1257963 1259165 . - 0 MSMEG_1192 MSMEG_1192 M23 peptidase domain protein identified by match to protein family HMM PF01551 A0QRP6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1259580 1261274 . + 0 MSMEG_1193 MSMEG_1193 TROVE domain protein identified by match to protein family HMM PF05731 A0QRP7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1261318 1261740 . - 0 MSMEG_1194 MSMEG_1194 hypothetical protein identified by Glimmer2; putative A0QRP8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1261917 1263128 . + 0 MSMEG_1195 MSMEG_1195 conserved hypothetical protein A0QRP9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1263197 1265188 . - 0 MSMEG_1196 MSMEG_1196 SNF2 domain protein identified by match to protein family HMM PF00176 A0QRQ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1265252 1265509 . - 0 MSMEG_1197 MSMEG_1197 transcriptional regulator, LuxR family protein identified by match to protein family HMM PF00196 A0QRQ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1265675 1266436 . + 0 MSMEG_1198 MSMEG_1198 hypothetical protein identified by Glimmer2; putative A0QRQ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1266507 1268882 . - 0 MSMEG_1199 MSMEG_1199 conserved hypothetical protein identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374 A0QRQ3 No unknown Rv0585c Rv0585c NC_008596.1 Mycobrowser_v3 CDS 1393703 1394095 . + 0 MSMEG_1300 MSMEG_1300 hypothetical protein identified by Glimmer2; putative A0QS02 No unknown NC_008596.1 Mycobrowser_v3 CDS 1269105 1270931 . + 0 MSMEG_1200 MSMEG_1200 serine/threonine-protein kinase PknD identified by match to protein family HMM PF00069; match to protein family HMM PF00497 A0QRQ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1270939 1271619 . - 0 MSMEG_1201 MSMEG_1201 hypothetical protein identified by Glimmer2; putative A0QRQ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1271693 1271971 . + 0 MSMEG_1202 MSMEG_1202 hypothetical protein identified by Glimmer2; putative A0QRQ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1272165 1273415 . + 0 MSMEG_1204 MSMEG_1204 3-oxoacyl-[acyl-carrier-protein] synthase 2 identified by match to protein family HMM PF00109; match to protein family HMM PF02801 A0QRQ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1307514 1307831 . + 0 MSMEG_1237 MSMEG_1237 hypothetical protein identified by Glimmer2; putative A0QRU0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1273412 1274296 . - 0 MSMEG_1203 MSMEG_1203 methoxy mycolic acid synthase 1 identified by match to protein family HMM PF02353 A0QRQ8 No unknown Rv0645c Rv0645c NC_008596.1 Mycobrowser_v3 CDS 1277332 1278369 . + 0 MSMEG_1208 MSMEG_1208 glycosyltransferase, group I A0QRR2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1278387 1279841 . + 0 MSMEG_1209 MSMEG_1209 glycosidase identified by match to protein family HMM PF04041 A0QRR3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1279842 1280711 . - 0 MSMEG_1210 MSMEG_1210 conserved hypothetical protein identified by match to protein family HMM PF01936 A0QRR4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1280838 1281929 . + 0 MSMEG_1211 MSMEG_1211 Fatty acid desaturase identified by match to protein family HMM PF00487 A0QRR5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1282273 1282482 . + 0 MSMEG_1212 MSMEG_1212 hypothetical protein identified by Glimmer2; putative A0QRR6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1282629 1283942 . + 0 MSMEG_1213 MSMEG_1213 cytochrome P450 monooxygenase identified by match to protein family HMM PF00067 A0QRR7 No unknown Rv0568 Rv0568 NC_008596.1 Mycobrowser_v3 CDS 1283977 1284996 . + 0 MSMEG_1214 MSMEG_1214 oxidoreductase identified by match to protein family HMM PF07995 A0QRR8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1285707 1287002 . - 0 MSMEG_1216 MSMEG_1216 ABC-type transport system periplasmic substrate-binding protein identified by match to protein family HMM PF01094 A0QRS0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1287035 1287748 . - 0 MSMEG_1217 MSMEG_1217 ABC-type transport system ATP-binding protein I identified by match to protein family HMM PF00005 A0QRS1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1287741 1288457 . - 0 MSMEG_1218 MSMEG_1218 ABC-type transport system ATP-binding protein II identified by match to protein family HMM PF00005 A0QRS2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1288454 1289461 . - 0 MSMEG_1219 MSMEG_1219 ABC-type transport system permease protein II identified by match to protein family HMM PF02653 A0QRS3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1289458 1290333 . - 0 MSMEG_1220 MSMEG_1220 ABC-type transport system permease protein I identified by match to protein family HMM PF02653 A0QRS4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1290581 1291009 . + 0 MSMEG_1221 MSMEG_1221 rifampin ADP-ribosyl transferase A0QRS5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1451809 1452558 . + 0 MSMEG_1360 MSMEG_1360 endonuclease/exonuclease/phosphatase identified by match to protein family HMM PF03372 A0QS58 No unknown NC_008596.1 Mycobrowser_v3 CDS 1326988 1327353 . + 0 MSMEG_1251 MSMEG_1251 conserved hypothetical protein identified by match to protein family HMM PF05305 A0QRV4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1291202 1292839 . - 0 MSMEG_1222 MSMEG_1222 ISMsm6, transposase identified by similarity to GP:2935133; match to protein family HMM PF01609 A0QRS6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1292948 1293064 . + 0 MSMEG_1224 MSMEG_1224 rifampin ADP-ribosyl transferase A0QRS7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1293051 1293362 . - 0 MSMEG_1223 MSMEG_1223 hypothetical protein identified by Glimmer2; putative A0QRS8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1294590 1295882 . - 0 MSMEG_1225 MSMEG_1225 conserved hypothetical protein A0QRS9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1295995 1296870 . + 0 MSMEG_1226 MSMEG_1226 sulfatase-modifying factor 1 identified by match to protein family HMM PF03781 A0QRT0 No unknown Rv0712 Rv0712 NC_008596.1 Mycobrowser_v3 CDS 1297094 1297819 . + 0 MSMEG_1227 MSMEG_1227 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07702 A0QRT1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1297882 1299234 . + 0 MSMEG_1228 MSMEG_1228 sulfatase identified by match to protein family HMM PF00884 A0QRT2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1299255 1301174 . + 0 MSMEG_1229 gyrB DNA gyrase, B subunit identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059 A0QRT3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1394284 1394544 . + 0 MSMEG_1301 MSMEG_1301 NanT3 identified by match to protein family HMM PF00196 A0QS03 No unknown NC_008596.1 Mycobrowser_v3 CDS 1302007 1303464 . + 0 MSMEG_1232 MSMEG_1232 ABC transporter substrate-binding protein A0QRT6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1304379 1305128 . + 0 MSMEG_1234 MSMEG_1234 taurine import ATP-binding protein TauB identified by match to protein family HMM PF00005 A0QRT7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1305154 1306650 . + 0 MSMEG_1235 MSMEG_1235 sulfate permease identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740 A0QRT8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1306698 1307345 . - 0 MSMEG_1236 MSMEG_1236 Mpr protein A0QRT9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1325180 1326046 . - 0 MSMEG_1249 MSMEG_1249 ISMsm7, transposase orfB identified by similarity to GP:12484144; match to protein family HMM PF00665 A0QRV2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1327732 1333908 . + 0 MSMEG_1252 MSMEG_1252 conserved hypothetical protein A0QRV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1308315 1310015 . + 0 MSMEG_1238 MSMEG_1238 type III restriction enzyme, res subunit identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851 A0QRU1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1310225 1311592 . - 0 MSMEG_1239 MSMEG_1239 ISMsm4, transposase identified by similarity to GP:150005; match to protein family HMM PF01610 A0QPK5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1311730 1313316 . + 0 MSMEG_1240 MSMEG_1240 conserved hypothetical protein A0QRU3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1313313 1314251 . + 0 MSMEG_1241 MSMEG_1241 conserved hypothetical protein A0QRU4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1314552 1315712 . + 0 MSMEG_1242 iscS cysteine desulfurase IscS identified by match to protein family HMM PF00266 A0QRU5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1315709 1316782 . + 0 MSMEG_1243 MSMEG_1243 conserved hypothetical protein A0QRU6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1316779 1320237 . + 0 MSMEG_1244 MSMEG_1244 conserved hypothetical protein A0QRU7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1394787 1394954 . + 0 MSMEG_1302 MSMEG_1302 alkylphosphonate uptake protein A0QS04 No unknown NC_008596.1 Mycobrowser_v3 CDS 1320230 1321078 . + 0 MSMEG_1245 MSMEG_1245 phosphoadenosine phosphosulfate reductase identified by match to protein family HMM PF01507 A0QRU8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1321231 1322667 . + 0 MSMEG_1246 MSMEG_1246 conserved hypothetical protein A0QRU9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1323156 1323980 . + 0 MSMEG_1247 MSMEG_1247 conserved hypothetical protein A0QRV0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1324238 1324906 . + 0 MSMEG_1248 MSMEG_1248 hypothetical protein identified by Glimmer2; putative A0QRV1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1326043 1326339 . - 0 MSMEG_1250 MSMEG_1250 ISMsm7, transposase orfA identified by similarity to GP:6572439; match to protein family HMM PF01527 A0QRV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1334462 1337860 . + 0 MSMEG_1253 MSMEG_1253 conserved hypothetical protein A0QRV6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1337844 1342847 . + 0 MSMEG_1254 MSMEG_1254 DEAD/DEAH box helicase identified by match to protein family HMM PF00270; match to protein family HMM PF00271 A0QRV7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1343125 1345338 . + 0 MSMEG_1255 MSMEG_1255 UvrD/Rep helicase identified by match to protein family HMM PF00580 A0QRV8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1345348 1345767 . + 0 MSMEG_1256 MSMEG_1256 hypothetical protein identified by Glimmer2; putative A0QRV9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1346160 1346861 . + 0 MSMEG_1257 MSMEG_1257 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1346869 1348191 . - 0 MSMEG_1258 MSMEG_1258 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1347910 1348326 . + 0 MSMEG_1259 MSMEG_1259 hypothetical protein identified by Glimmer2; putative A0QRW2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1348648 1350015 . - 0 MSMEG_1260 MSMEG_1260 hypothetical protein identified by Glimmer2; putative A0QRW3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1350265 1351347 . + 0 MSMEG_1261 MSMEG_1261 hypothetical protein identified by Glimmer2; putative A0QRW4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1352309 1352833 . - 0 MSMEG_1263 MSMEG_1263 conserved hypothetical protein A0QRW6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1353580 1353978 . + 0 MSMEG_1264 MSMEG_1264 prophage Lp1 protein 5 identified by match to protein family HMM PF07553 A0QRW7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1354095 1355633 . - 0 MSMEG_1265 MSMEG_1265 conserved hypothetical protein A0QRW8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1355685 1356374 . - 0 MSMEG_1266 MSMEG_1266 ankyrin-repeat containing protein A0QRW9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1357886 1358554 . + 0 MSMEG_1268 MSMEG_1268 nudix hydrolase identified by match to protein family HMM PF00293 A0QRX0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1358568 1359566 . - 0 MSMEG_1269 MSMEG_1269 Ser/Thr protein phosphatase family protein identified by match to protein family HMM PF00149 A0QRX1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1359598 1359891 . - 0 MSMEG_1270 MSMEG_1270 hypothetical protein identified by Glimmer2; putative A0QRX2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1360010 1360372 . - 0 MSMEG_1271 MSMEG_1271 hypothetical protein identified by Glimmer2; putative A0QRX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1360369 1361847 . - 0 MSMEG_1272 MSMEG_1272 putative ribosylglycohydrolase identified by match to protein family HMM PF00782; match to protein family HMM PF03747 A0QRX4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1362036 1362377 . - 0 MSMEG_1273 MSMEG_1273 conserved hypothetical protein identified by match to protein family HMM PF05305 A0QRX5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1362437 1363564 . - 0 MSMEG_1274 MSMEG_1274 gluconolactonase identified by match to protein family HMM PF03758 A0QRX6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1363745 1364824 . - 0 MSMEG_1275 MSMEG_1275 HNH nuclease, putative A0QRX7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1364892 1365188 . + 0 MSMEG_1276 MSMEG_1276 hypothetical protein identified by Glimmer2; putative A0QRX8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1365336 1365533 . + 0 MSMEG_1277 MSMEG_1277 hypothetical protein identified by Glimmer2; putative A0QRX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1365530 1365922 . + 0 MSMEG_1278 MSMEG_1278 death-on-curing protein identified by match to protein family HMM PF05012; match to protein family HMM TIGR01550 A0QRY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1365999 1367429 . + 0 MSMEG_1279 MSMEG_1279 conserved hypothetical protein A0QRY1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1367426 1368148 . + 0 MSMEG_1280 MSMEG_1280 hypothetical cytosolic protein A0QRY2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1433302 1434039 . - 0 MSMEG_1334 MSMEG_1334 metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 A0QS36 No unknown Rv0634c Rv0634c NC_008596.1 Mycobrowser_v3 CDS 1496172 1496753 . + 0 MSMEG_1395 MSMEG_1395 lipoprotein, putative A0QS93,A4ZHU4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1418115 1419377 . + 0 MSMEG_1322 MSMEG_1322 ErfK/YbiS/YcfS/YnhG family protein identified by match to protein family HMM PF03734 A0QS24 No unknown NC_008596.1 Mycobrowser_v3 CDS 1368135 1371380 . + 0 MSMEG_1281 MSMEG_1281 conserved hypothetical protein A0QRY3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1371377 1372546 . + 0 MSMEG_1282 MSMEG_1282 hypothetical cytosolic protein A0QRY4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1372567 1372821 . + 0 MSMEG_1283 MSMEG_1283 probable ribbon-helix-helix transcription factor, family protein identified by match to protein family HMM PF07704 A0QRY5 No unknown Rv0623 Rv0623 NC_008596.1 Mycobrowser_v3 CDS 1372821 1373210 . + 0 MSMEG_1284 MSMEG_1284 PIN domain protein identified by match to protein family HMM PF01850 A0QRY6 No unknown Rv0624 Rv0624 NC_008596.1 Mycobrowser_v3 CDS 1373229 1375634 . - 0 MSMEG_1285 MSMEG_1285 tetratricopeptide repeat family protein identified by match to protein family HMM PF02810; match to protein family HMM PF07721 A0QRY7 No unknown Rv0613c Rv0613c NC_008596.1 Mycobrowser_v3 CDS 1375656 1377416 . - 0 MSMEG_1286 MSMEG_1286 sulfatase family protein identified by match to protein family HMM PF00884 A0QRY8 No unknown Rv3077 Rv3077 NC_008596.1 Mycobrowser_v3 CDS 1377413 1377850 . - 0 MSMEG_1287 MSMEG_1287 cyclase/dehydrase superfamily protein similar to Streptomyces cyclase/dehydrase superfamily protein; identified by match to protein family HMM PF03364 A0QRY9 No unknown Rv3076 Rv3076 NC_008596.1 Mycobrowser_v3 CDS 1395326 1396144 . - 0 MSMEG_1303 MSMEG_1303 putative transcriptional regulator identified by match to protein family HMM PF01381 A0QS05 No unknown NC_008596.1 Mycobrowser_v3 CDS 1378017 1379666 . + 0 MSMEG_1288 MSMEG_1288 conserved hypothetical protein A0QRZ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1379677 1380480 . - 0 MSMEG_1289 MSMEG_1289 conserved hypothetical protein A0QRZ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1396275 1397318 . + 0 MSMEG_1304 MSMEG_1304 rhizopine catabolism protein identified by match to protein family HMM PF00248 A0QS06 No unknown NC_008596.1 Mycobrowser_v3 CDS 1380557 1382425 . + 0 MSMEG_1290 ilvD dihydroxy-acid dehydratase identified by match to protein family HMM PF00920; match to protein family HMM TIGR00110 A0QRZ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1415879 1417180 . - 0 MSMEG_1320 MSMEG_1320 major facilitator superfamily protein MFS_1 identified by match to protein family HMM PF07690 A0QS22 No unknown NC_008596.1 Mycobrowser_v3 CDS 1382428 1385109 . - 0 MSMEG_1291 MSMEG_1291 putative oxidoreductase identified by match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738 A0QRZ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1385106 1385990 . - 0 MSMEG_1292 MSMEG_1292 FAD binding domain in molybdopterin dehydrogenase protein identified by match to protein family HMM PF00941 A0QRZ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1386036 1387940 . + 0 MSMEG_1293 MSMEG_1293 xanthine/uracil permeases family protein identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801 A0QRZ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1387942 1388448 . + 0 MSMEG_1294 MSMEG_1294 allantoicase A0QRZ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1388445 1388762 . + 0 MSMEG_1295 MSMEG_1295 transthyretin identified by match to protein family HMM PF00576 A0QRZ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1388764 1389663 . + 0 MSMEG_1296 MSMEG_1296 uricase identified by match to protein family HMM PF01014 A0QRZ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1389680 1391038 . + 0 MSMEG_1297 MSMEG_1297 hydroxydechloroatrazine ethylaminohydrolase identified by match to protein family HMM PF01979; match to protein family HMM PF07969 A0QRZ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1391035 1392369 . + 0 MSMEG_1298 MSMEG_1298 guanine deaminase identified by match to protein family HMM PF01979; match to protein family HMM PF07969 A0QS00 No unknown NC_008596.1 Mycobrowser_v3 CDS 1392514 1393572 . + 0 MSMEG_1299 MSMEG_1299 oxidoreductase, 2OG-Fe(II) oxygenase family protein identified by match to protein family HMM PF03171 A0QS01 No unknown NC_008596.1 Mycobrowser_v3 CDS 1397328 1397936 . - 0 MSMEG_1305 MSMEG_1305 TetR family protein regulatory protein identified by match to protein family HMM PF00440 A0QS07 No unknown NC_008596.1 Mycobrowser_v3 CDS 1398000 1399523 . - 0 MSMEG_1306 MSMEG_1306 aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 A0QS08 No unknown NC_008596.1 Mycobrowser_v3 CDS 1399532 1399834 . - 0 MSMEG_1307 MSMEG_1307 EthD protein identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118 A0QS09 No unknown NC_008596.1 Mycobrowser_v3 CDS 1399868 1401571 . - 0 MSMEG_1308 MSMEG_1308 peptidase S15 identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976 A0QS10 No unknown NC_008596.1 Mycobrowser_v3 CDS 1402155 1402271 . + 0 MSMEG_1309 MSMEG_1309 conserved hypothetical protein A0QS11 No unknown NC_008596.1 Mycobrowser_v3 CDS 1402450 1403853 . + 0 MSMEG_1310 MSMEG_1310 TnpC protein identified by match to protein family HMM PF01609 A0QS12 No unknown NC_008596.1 Mycobrowser_v3 CDS 1404005 1405996 . - 0 MSMEG_1311 MSMEG_1311 oligopeptide transporter, OPT family protein identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733 A0QS13 No unknown Rv2395 Rv2395 NC_008596.1 Mycobrowser_v3 CDS 1406153 1406749 . + 0 MSMEG_1312 MSMEG_1312 hypothetical protein identified by Glimmer2; putative A0QS14 No unknown NC_008596.1 Mycobrowser_v3 CDS 1406859 1409201 . + 0 MSMEG_1313 MSMEG_1313 secreted protein A0QS15 No unknown NC_008596.1 Mycobrowser_v3 CDS 1409246 1410160 . + 0 MSMEG_1315 MSMEG_1315 transporter, small conductance mechanosensitive ion channel (MscS) family protein identified by match to protein family HMM PF00924 A0QS16 No unknown NC_008596.1 Mycobrowser_v3 CDS 1410157 1410906 . - 0 MSMEG_1314 MSMEG_1314 hypothetical protein identified by Glimmer2; putative A0QS17 No unknown NC_008596.1 Mycobrowser_v3 CDS 1411176 1412792 . - 0 MSMEG_1316 prfC peptide chain release factor 3 identified by match to protein family HMM PF00009; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503 A0QS18 No unknown NC_008596.1 Mycobrowser_v3 CDS 1413062 1413751 . - 0 MSMEG_1317 MSMEG_1317 transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QS19 No unknown NC_008596.1 Mycobrowser_v3 CDS 1498302 1498676 . + 0 MSMEG_1398 rpsL ribosomal protein S12 identified by match to protein family HMM PF00164; match to protein family HMM TIGR00981 A0QS96 No unknown Rv0682 Rv0682 NC_008596.1 Mycobrowser_v3 CDS 1413803 1414714 . - 0 MSMEG_1318 MSMEG_1318 polysaccharide deacetylase family protein identified by match to protein family HMM PF01522 A0QS20 No unknown NC_008596.1 Mycobrowser_v3 CDS 1414728 1415882 . - 0 MSMEG_1319 MSMEG_1319 Asp/Glu racemase identified by match to protein family HMM PF01177 A0QS21 No unknown NC_008596.1 Mycobrowser_v3 CDS 1417321 1417941 . + 0 MSMEG_1321 MSMEG_1321 5-carboxymethyl-2-hydroxymuconate delta-isomerase identified by match to protein family HMM PF01557 A0QS23 No unknown NC_008596.1 Mycobrowser_v3 CDS 1420424 1422088 . - 0 MSMEG_1325 recD exodeoxyribonuclease V, alpha subunit identified by match to protein family HMM TIGR01447 A0QS28 No unknown Rv0629c Rv0629c NC_008596.1 Mycobrowser_v3 CDS 1422085 1425336 . - 0 MSMEG_1327 recB exodeoxyribonuclease V, beta subunit identified by match to protein family HMM PF00580; match to protein family HMM TIGR00609 A0QS29 No unknown Rv0630c Rv0630c NC_008596.1 Mycobrowser_v3 CDS 1425333 1428596 . - 0 MSMEG_1328 recC exodeoxyribonuclease V, gamma subunit identified by match to protein family HMM PF04257; match to protein family HMM TIGR01450 A0QS30 No unknown Rv0631c Rv0631c NC_008596.1 Mycobrowser_v3 CDS 1456715 1457314 . + 0 MSMEG_1362 MSMEG_1362 conserved hypothetical protein A0QS60 No unknown NC_008596.1 Mycobrowser_v3 CDS 1428614 1429858 . - 0 MSMEG_1329 MSMEG_1329 major facilitator superfamily protein MFS_1, putative identified by match to protein family HMM PF05977; match to protein family HMM PF07690 A0QS31 No unknown NC_008596.1 Mycobrowser_v3 CDS 1429855 1430313 . - 0 MSMEG_1330 MSMEG_1330 MarR-family protein transcriptional regulator identified by match to protein family HMM PF01047 A0QS32 No unknown NC_008596.1 Mycobrowser_v3 CDS 1430426 1431133 . - 0 MSMEG_1331 MSMEG_1331 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QS33 No unknown Rv0632c Rv0632c NC_008596.1 Mycobrowser_v3 CDS 1431151 1432008 . - 0 MSMEG_1332 MSMEG_1332 conserved hypothetical protein A0QS34 No unknown NC_008596.1 Mycobrowser_v3 CDS 1498676 1499146 . + 0 MSMEG_1399 rpsG ribosomal protein S7 identified by match to protein family HMM PF00177; match to protein family HMM TIGR01029 A0QS97 No unknown Rv0683 Rv0683 NC_008596.1 Mycobrowser_v3 CDS 1432067 1433059 . - 0 MSMEG_1333 MSMEG_1333 conserved hypothetical protein A0QS35 No unknown NC_008596.1 Mycobrowser_v3 CDS 4286460 4290514 . - 0 MSMEG_4206 MSMEG_4206 Molybdopterin oxidoreductase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00384 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 1434167 1434628 . + 0 MSMEG_1335 MSMEG_1335 transcriptional regulator, BadM/Rrf2 family protein identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738 A0QS37 No unknown NC_008596.1 Mycobrowser_v3 CDS 1434628 1435863 . + 0 MSMEG_1336 MSMEG_1336 flavohemoprotein, putative identified by similarity to SP:P39662; match to protein family HMM PF00042; match to protein family HMM PF00175; match to protein family HMM PF00970 A0QS38 No unknown NC_008596.1 Mycobrowser_v3 CDS 1438583 1439425 . + 0 MSMEG_1345 MSMEG_1345 transcription antitermination protein NusG identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922 A0QS44 No unknown Rv0639 Rv0639 NC_008596.1 Mycobrowser_v3 CDS 1439493 1439921 . + 0 MSMEG_1346 rplK ribosomal protein L11 identified by match to protein family HMM PF00298; match to protein family HMM PF03946; match to protein family HMM TIGR01632 A0QS45 No unknown Rv0640 Rv0640 NC_008596.1 Mycobrowser_v3 CDS 1439987 1440694 . + 0 MSMEG_1347 rplA ribosomal protein L1 identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169 A0QS46 No unknown Rv0641 Rv0641 NC_008596.1 Mycobrowser_v3 CDS 1457319 1458224 . + 0 MSMEG_1363 MSMEG_1363 glucokinase identified by match to protein family HMM PF00480 A0QS61 No unknown Rv0650 Rv0650 NC_008596.1 Mycobrowser_v3 CDS 1440768 1441997 . - 0 MSMEG_1348 MSMEG_1348 RNA polymerase ECF-subfamily protein sigma factor identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QS47 No unknown NC_008596.1 Mycobrowser_v3 CDS 1442005 1442700 . - 0 MSMEG_1349 MSMEG_1349 dgpf domain family protein identified by match to protein family HMM PF04946 A0QS48 No unknown NC_008596.1 Mycobrowser_v3 CDS 1442825 1443685 . - 0 MSMEG_1350 MSMEG_1350 cyclopropane-fatty-acyl-phospholipid synthase 1 identified by match to protein family HMM PF02353 A0QS49 No unknown NC_008596.1 Mycobrowser_v3 CDS 1443878 1444750 . - 0 MSMEG_1351 MSMEG_1351 cyclopropane-fatty-acyl-phospholipid synthase 1 identified by match to protein family HMM PF02353 A0QS50 No unknown Rv3392c Rv3392c NC_008596.1 Mycobrowser_v3 CDS 1444930 1445847 . - 0 MSMEG_1352 MSMEG_1352 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0QS51 No unknown Rv0646c Rv0646c NC_008596.1 Mycobrowser_v3 CDS 1481785 1482201 . + 0 MSMEG_1381 MSMEG_1381 MmpS5 protein identified by match to protein family HMM PF05423 A0QS79 No unknown NC_008596.1 Mycobrowser_v3 CDS 1445847 1447268 . - 0 MSMEG_1353 MSMEG_1353 ABC1 family protein identified by match to protein family HMM PF03109 A0QS52 No unknown Rv0647c Rv0647c NC_008596.1 Mycobrowser_v3 CDS 1448423 1449022 . + 0 MSMEG_1355 MSMEG_1355 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QS53 No unknown NC_008596.1 Mycobrowser_v3 CDS 1449027 1449638 . - 0 MSMEG_1356 MSMEG_1356 conserved hypothetical protein identified by match to protein family HMM PF04978 A0QS54 No unknown NC_008596.1 Mycobrowser_v3 CDS 1449643 1450170 . - 0 MSMEG_1357 MSMEG_1357 conserved hypothetical protein A0QS55 No unknown NC_008596.1 Mycobrowser_v3 CDS 1450233 1451195 . + 0 MSMEG_1359 MSMEG_1359 DeoR-family protein transcriptional regulator identified by match to protein family HMM PF02082; match to protein family HMM PF08220 A0QS56 No unknown NC_008596.1 Mycobrowser_v3 CDS 1451188 1451748 . - 0 MSMEG_1358 MSMEG_1358 conserved hypothetical protein A0QS57 No unknown NC_008596.1 Mycobrowser_v3 CDS 1452576 1456718 . + 0 MSMEG_1361 MSMEG_1361 alpha-mannosidase identified by match to protein family HMM PF01074; match to protein family HMM PF07748 A0QS59 No unknown Rv0648 Rv0648 NC_008596.1 Mycobrowser_v3 CDS 1459848 1460930 . + 0 MSMEG_1366 MSMEG_1366 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0QS64 No unknown Rv0655 Rv0655 NC_008596.1 Mycobrowser_v3 CDS 1461630 1465139 . + 0 MSMEG_1367 rpoB DNA-directed RNA polymerase, beta subunit identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013 P60281 No unknown Rv0667 Rv0667 NC_008596.1 Mycobrowser_v3 CDS 1479288 1480475 . + 0 MSMEG_1379 MSMEG_1379 conserved hypothetical protein identified by similarity to SP:P37339; match to protein family HMM PF01266 A0QS77 No unknown NC_008596.1 Mycobrowser_v3 CDS 4401582 4401829 . + 0 MSMEG_4312 MSMEG_4312 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 1480902 1481606 . - 0 MSMEG_1380 MSMEG_1380 transcriptional regulator identified by match to protein family HMM PF00440 A0QS78 No unknown NC_008596.1 Mycobrowser_v3 CDS 1497443 1498018 . + 0 MSMEG_1397 MSMEG_1397 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QS95 No unknown Rv0681 Rv0681 NC_008596.1 Mycobrowser_v3 CDS 1465203 1469156 . + 0 MSMEG_1368 rpoC DNA-directed RNA polymerase, beta' subunit identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386 A0QS66 No unknown Rv0668 Rv0668 NC_008596.1 Mycobrowser_v3 CDS 1469221 1470270 . - 0 MSMEG_1369 MSMEG_1369 LacI-family protein transcriptional regulator identified by match to protein family HMM PF00356; match to protein family HMM PF00532 A0QS67 No unknown NC_008596.1 Mycobrowser_v3 CDS 1470431 1471456 . + 0 MSMEG_1370 MSMEG_1370 2-deoxy-scyllo-inosamine dehydrogenase identified by match to protein family HMM PF00107 A0QS68 No unknown NC_008596.1 Mycobrowser_v3 CDS 1561939 1562307 . + 0 MSMEG_1465 rplN ribosomal protein L14 identified by match to protein family HMM PF00238; match to protein family HMM TIGR01067 A0QSF9 No unknown Rv0714 Rv0714 NC_008596.1 Mycobrowser_v3 CDS 1471453 1472454 . + 0 MSMEG_1371 MSMEG_1371 conserved hypothetical protein A0QS69 No unknown NC_008596.1 Mycobrowser_v3 CDS 1472465 1473223 . + 0 MSMEG_1372 MSMEG_1372 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0QS70 No unknown NC_008596.1 Mycobrowser_v3 CDS 1473220 1474338 . + 0 MSMEG_1373 MSMEG_1373 ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components identified by match to protein family HMM PF02653 A0QS71 No unknown NC_008596.1 Mycobrowser_v3 CDS 1474328 1475374 . + 0 MSMEG_1374 MSMEG_1374 ribose ABC transporter, periplasmic binding protein identified by match to protein family HMM PF00532 A0QS72 No unknown NC_008596.1 Mycobrowser_v3 CDS 1475387 1476229 . - 0 MSMEG_1375 MSMEG_1375 tagatose-1,6-bisphosphate aldolase GatY identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167 A0QS73 No unknown NC_008596.1 Mycobrowser_v3 CDS 1476315 1477562 . + 0 MSMEG_1376 MSMEG_1376 putative xylulose kinase identified by match to protein family HMM PF00370 A0QS74 No unknown NC_008596.1 Mycobrowser_v3 CDS 1477559 1478347 . + 0 MSMEG_1377 MSMEG_1377 DeoR-family protein transcriptional regulator identified by match to protein family HMM PF00455; match to protein family HMM PF08220 A0QS75 No unknown NC_008596.1 Mycobrowser_v3 CDS 1478344 1479261 . + 0 MSMEG_1378 MSMEG_1378 1-phosphofructokinase identified by match to protein family HMM PF00294 A0QS76 No unknown NC_008596.1 Mycobrowser_v3 CDS 1482198 1485101 . + 0 MSMEG_1382 MSMEG_1382 MmpL5 protein identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833 A0QS80 No unknown NC_008596.1 Mycobrowser_v3 CDS 1485148 1485900 . + 0 MSMEG_1383 MSMEG_1383 endonuclease IV identified by match to protein family HMM PF01261; match to protein family HMM TIGR00587 A0QS81 No unknown Rv0670 Rv0670 NC_008596.1 Mycobrowser_v3 CDS 1485994 1487205 . + 0 MSMEG_1385 MSMEG_1385 PAP2 superfamily protein identified by match to protein family HMM PF01569 A0QS82 No unknown NC_008596.1 Mycobrowser_v3 CDS 1487074 1487475 . - 0 MSMEG_1384 MSMEG_1384 conserved hypothetical protein identified by match to protein family HMM PF05899 A0QS83 No unknown NC_008596.1 Mycobrowser_v3 CDS 1562308 1562625 . + 0 MSMEG_1466 rplX ribosomal protein L24 identified by match to protein family HMM PF00467; match to protein family HMM TIGR01079 A0QSG0 No unknown Rv0715 Rv0715 NC_008596.1 Mycobrowser_v3 CDS 1487534 1488700 . + 0 MSMEG_1386 MSMEG_1386 hypothetical protein identified by Glimmer2; putative A0QS84 No unknown NC_008596.1 Mycobrowser_v3 CDS 1488754 1490409 . + 0 MSMEG_1387 MSMEG_1387 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QS85 No unknown Rv0672 Rv0672 NC_008596.1 Mycobrowser_v3 CDS 1490456 1491394 . + 0 MSMEG_1388 MSMEG_1388 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QS86 No unknown Rv0673 Rv0673 NC_008596.1 Mycobrowser_v3 CDS 3302213 3302626 . + 0 MSMEG_3224 MSMEG_3224 conserved hypothetical protein A0QXA0 No unknown Rv1616 Rv1616 NC_008596.1 Mycobrowser_v3 CDS 1491401 1492138 . + 0 MSMEG_1389 MSMEG_1389 conserved hypothetical protein identified by match to protein family HMM PF07848; match to protein family HMM PF08223 A0QS87 No unknown Rv0674 Rv0674 NC_008596.1 Mycobrowser_v3 CDS 1492135 1492899 . + 0 MSMEG_1390 MSMEG_1390 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QS88 No unknown Rv0675 Rv0675 NC_008596.1 Mycobrowser_v3 CDS 1492993 1493892 . - 0 MSMEG_1391 MSMEG_1391 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QS89 No unknown NC_008596.1 Mycobrowser_v3 CDS 1494011 1495168 . + 0 MSMEG_1392 MSMEG_1392 alcohol dehydrogenase, class IV identified by match to protein family HMM PF00465 A0QS90 No unknown NC_008596.1 Mycobrowser_v3 CDS 1495173 1495583 . - 0 MSMEG_1393 MSMEG_1393 conserved hypothetical protein A0QS91 No unknown Rv0679c Rv0679c NC_008596.1 Mycobrowser_v3 CDS 1501413 1502603 . + 0 MSMEG_1401 tuf translation elongation factor Tu identified by match to protein family HMM PF00009; match to protein family HMM PF03143; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00485 A0QS98 No unknown Rv0685 Rv0685 NC_008596.1 Mycobrowser_v3 CDS 1502841 1503758 . + 0 MSMEG_1402 MSMEG_1402 hypothetical protein identified by Glimmer2; putative A0QS99 No unknown NC_008596.1 Mycobrowser_v3 CDS 1503848 1504765 . + 0 MSMEG_1403 MSMEG_1403 cutinase superfamily protein identified by match to protein family HMM PF01083 A0QSA0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1504930 1506252 . + 0 MSMEG_1404 MSMEG_1404 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1506260 1506961 . - 0 MSMEG_1405 MSMEG_1405 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1670549 1670998 . + 0 MSMEG_1581 MSMEG_1581 conserved hypothetical protein A0QSS2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1507065 1507916 . + 0 MSMEG_1406 MSMEG_1406 conserved hypothetical protein A0QSA3 No unknown Rv0686 Rv0686 NC_008596.1 Mycobrowser_v3 CDS 1510936 1512213 . + 0 MSMEG_1409 arcA arginine deiminase identified by similarity to SP:P13981; match to protein family HMM PF02274; match to protein family HMM TIGR01078 A0QSA4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1512243 1513094 . + 0 MSMEG_1410 MSMEG_1410 carveol dehydrogenase identified by match to protein family HMM PF00106 A0QSA5 No unknown Rv0687 Rv0687 NC_008596.1 Mycobrowser_v3 CDS 1513135 1514016 . - 0 MSMEG_1411 MSMEG_1411 universal stress protein family protein identified by match to protein family HMM PF00582 A0QSA6 No unknown Rv2319c Rv2319c NC_008596.1 Mycobrowser_v3 CDS 1514075 1515580 . - 0 MSMEG_1412 MSMEG_1412 amino acid permease identified by match to protein family HMM PF00324; match to protein family HMM PF01490 A0QSA7 No unknown Rv2320c Rv2320c NC_008596.1 Mycobrowser_v3 CDS 1515608 1516876 . - 0 MSMEG_1413 rocD ornithine--oxo-acid transaminase identified by match to protein family HMM PF00202; match to protein family HMM TIGR01885 A0QSA8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1516873 1517760 . - 0 MSMEG_1414 MSMEG_1414 Amidinotransferase identified by match to protein family HMM PF02274 A0QSA9 No unknown Rv2323c Rv2323c NC_008596.1 Mycobrowser_v3 CDS 1517874 1518320 . + 0 MSMEG_1415 MSMEG_1415 AsnC-family protein transcriptional regulator identified by match to protein family HMM PF01037 A0QSB0 No unknown Rv2324 Rv2324 NC_008596.1 Mycobrowser_v3 CDS 1518390 1519577 . + 0 MSMEG_1416 MSMEG_1416 Pyridine nucleotide-disulphide oxidoreductase identified by match to protein family HMM PF00070; match to protein family HMM PF07992 A0QSB1 No unknown Rv0688 Rv0688 NC_008596.1 Mycobrowser_v3 CDS 1519642 1520925 . - 0 MSMEG_1417 MSMEG_1417 glyoxalase family protein identified by match to protein family HMM PF00903 A0QSB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6614451 6614735 . - 0 MSMEG_6559 MSMEG_6559 hypothetical protein identified by Glimmer2; putative A0R6I3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1520922 1521446 . - 0 MSMEG_1418 MSMEG_1418 RNA polymerase ECF-type sigma factor identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QSB3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1521559 1522269 . + 0 MSMEG_1419 MSMEG_1419 conserved hypothetical protein A0QSB4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1522270 1522872 . - 0 MSMEG_1420 MSMEG_1420 probable transcriptional regulatory protein identified by match to protein family HMM PF00440 A0QSB5 No unknown Rv0691c Rv0691c NC_008596.1 Mycobrowser_v3 CDS 1522905 1523063 . + 0 MSMEG_1421 MSMEG_1421 hypothetical protein identified by Glimmer2; putative A0QSB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1523066 1523374 . + 0 MSMEG_1422 MSMEG_1422 conserved hypothetical protein A0QSB7 No unknown Rv0692 Rv0692 NC_008596.1 Mycobrowser_v3 CDS 3889571 3889792 . + 0 MSMEG_3820 MSMEG_3820 hypothetical protein identified by Glimmer2; putative A0QYX4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1523371 1524549 . + 0 MSMEG_1423 MSMEG_1423 radical SAM domain protein identified by match to protein family HMM PF04055 A0QSB8 No unknown Rv0693 Rv0693 NC_008596.1 Mycobrowser_v3 CDS 1524546 1525745 . + 0 MSMEG_1424 MSMEG_1424 FMN-dependent dehydrogenase identified by match to protein family HMM PF01070 A0QSB9 No unknown Rv0694 Rv0694 NC_008596.1 Mycobrowser_v3 CDS 1525942 1526610 . + 0 MSMEG_1425 MSMEG_1425 creatininase subfamily protein identified by match to protein family HMM PF02633 A0QSC0 No unknown Rv0695 Rv0695 NC_008596.1 Mycobrowser_v3 CDS 1526607 1528019 . + 0 MSMEG_1426 MSMEG_1426 probable membrane sugar transferase identified by match to protein family HMM PF00535 A0QSC1 No unknown Rv0696 Rv0696 NC_008596.1 Mycobrowser_v3 CDS 1528038 1529444 . + 0 MSMEG_1428 MSMEG_1428 glucose-methanol-choline oxidoreductase identified by match to protein family HMM PF00732; match to protein family HMM PF05199 A0QSC2 No unknown Rv0697 Rv0697 NC_008596.1 Mycobrowser_v3 CDS 1542699 1543220 . + 0 MSMEG_1446 MSMEG_1446 NTP pyrophosphohydrolase identified by match to protein family HMM PF00293 A0QSE1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1541650 1542066 . + 0 MSMEG_1443 rplP ribosomal protein L16 identified by match to protein family HMM PF00252; match to protein family HMM TIGR01164 A0QSD8 No unknown Rv0708 Rv0708 NC_008596.1 Mycobrowser_v3 CDS 1529431 1531005 . - 0 MSMEG_1427 MSMEG_1427 transmembrane efflux protein identified by match to protein family HMM PF07690 A0QSC3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1531094 1531729 . + 0 MSMEG_1430 MSMEG_1430 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QSC4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1531695 1532945 . - 0 MSMEG_1429 MSMEG_1429 cytochrome P450-terp identified by match to protein family HMM PF00067 A0QSC5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1562625 1563188 . + 0 MSMEG_1467 MSMEG_1467 50S ribosomal protein L5 identified by match to protein family HMM PF00281; match to protein family HMM PF00673 A0QSG1 No unknown Rv0716 Rv0716 NC_008596.1 Mycobrowser_v3 CDS 1533049 1534344 . - 0 MSMEG_1431 MSMEG_1431 cytochrome P450-terp identified by match to protein family HMM PF00067 A0QSC6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1534440 1536026 . + 0 MSMEG_1432 MSMEG_1432 acetylcholinesterase identified by match to protein family HMM PF00135 A0QSC7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1536028 1536393 . + 0 MSMEG_1434 MSMEG_1434 conserved hypothetical protein A0QSC8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1536329 1537144 . - 0 MSMEG_1433 MSMEG_1433 thioesterase A0QSC9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1537276 1537581 . + 0 MSMEG_1435 rpsJ ribosomal protein S10 identified by match to protein family HMM PF00338; match to protein family HMM TIGR01049 A0QSD0 No unknown Rv0700 Rv0700 NC_008596.1 Mycobrowser_v3 CDS 1537596 1538249 . + 0 MSMEG_1436 rplC ribosomal protein L3 identified by match to protein family HMM PF00297 A0QSD1 No unknown Rv0701 Rv0701 NC_008596.1 Mycobrowser_v3 CDS 1538249 1538896 . + 0 MSMEG_1437 rplD ribosomal protein L4/L1 family protein identified by match to protein family HMM PF00573 A0QSD2 No unknown Rv0702 Rv0702 NC_008596.1 Mycobrowser_v3 CDS 1538896 1539198 . + 0 MSMEG_1438 rplW ribosomal protein L23 identified by match to protein family HMM PF00276 A0QSD3 No unknown Rv0703 Rv0703 NC_008596.1 Mycobrowser_v3 CDS 1539223 1540059 . + 0 MSMEG_1439 rplB ribosomal protein L2 identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171 A0QSD4 No unknown Rv0704 Rv0704 NC_008596.1 Mycobrowser_v3 CDS 1540081 1540362 . + 0 MSMEG_1440 rpsS ribosomal protein S19 identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050 A0QSD5 No unknown Rv0705 Rv0705 NC_008596.1 Mycobrowser_v3 CDS 1540359 1540820 . + 0 MSMEG_1441 MSMEG_1441 50S ribosomal protein L22 identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044 A0QSD6 No unknown Rv0706 Rv0706 NC_008596.1 Mycobrowser_v3 CDS 1540820 1541647 . + 0 MSMEG_1442 rpsC ribosomal protein S3 identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009 A0QSD7 No unknown Rv0707 Rv0707 NC_008596.1 Mycobrowser_v3 CDS 1543239 1543640 . - 0 MSMEG_1447 MSMEG_1447 transcriptional regulator, MerR family protein identified by match to protein family HMM PF00376 A0QSE2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1543640 1545139 . - 0 MSMEG_1448 MSMEG_1448 integral membrane transporter identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740 A0QSE3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1546037 1546177 . + 0 MSMEG_1450 MSMEG_1450 hypothetical protein identified by Glimmer2; putative A0QSE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1563476 1563874 . + 0 MSMEG_1469 rpsH ribosomal protein S8 identified by match to protein family HMM PF00410 A0QSG3 No unknown Rv0718 Rv0718 NC_008596.1 Mycobrowser_v3 CDS 1546230 1548581 . + 0 MSMEG_1451 MSMEG_1451 arylsulfatase identified by match to protein family HMM PF00884 A0QSE5 No unknown Rv0711 Rv0711 NC_008596.1 Mycobrowser_v3 CDS 1548624 1549514 . + 0 MSMEG_1452 MSMEG_1452 sulfatase-modifying factor 1 identified by match to protein family HMM PF03781 A0QSE6 No unknown Rv0712 Rv0712 NC_008596.1 Mycobrowser_v3 CDS 1549538 1551166 . - 0 MSMEG_1453 MSMEG_1453 Citrate transporter identified by match to protein family HMM PF03600 A0QSE7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1551217 1551333 . + 0 MSMEG_1454 MSMEG_1454 hypothetical protein identified by Glimmer2; putative A0QSE8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1551538 1552914 . + 0 MSMEG_1455 MSMEG_1455 putative multidrug resistance protein identified by match to protein family HMM PF07690 A0QSE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1552915 1554600 . - 0 MSMEG_1456 MSMEG_1456 hypothetical protein identified by Glimmer2; putative A0QSF0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1554800 1555246 . + 0 MSMEG_1457 MSMEG_1457 conserved hypothetical protein identified by match to protein family HMM PF03928 A0QSF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1555365 1556084 . + 0 MSMEG_1458 MSMEG_1458 tena/thi-4 family protein identified by match to protein family HMM PF03070 A0QSF2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1556130 1556480 . + 0 MSMEG_1459 MSMEG_1459 Rieske [2Fe-2S] domain protein identified by match to protein family HMM PF00355 A0QSF3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1556477 1557703 . + 0 MSMEG_1460 MSMEG_1460 Pyridine nucleotide-disulphide oxidoreductase identified by match to protein family HMM PF00070; match to protein family HMM PF07992 A0QSF4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1557700 1559142 . + 0 MSMEG_1461 MSMEG_1461 5-oxovalerate dehydrogenase identified by match to protein family HMM PF00171 A0QSF5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1559157 1559510 . + 0 MSMEG_1462 MSMEG_1462 ferredoxin identified by match to protein family HMM PF00355 A0QSF6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1559507 1561111 . + 0 MSMEG_1463 MSMEG_1463 gamma-glutamyltranspeptidase identified by match to protein family HMM PF01019 A0QSF7 No unknown Rv0773c Rv0773c NC_008596.1 Mycobrowser_v3 CDS 1561101 1561595 . + 0 MSMEG_1464 MSMEG_1464 translation initiation inhibitor identified by match to protein family HMM PF01042 A0QSF8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1563889 1564428 . + 0 MSMEG_1470 MSMEG_1470 50S ribosomal protein L6 identified by match to protein family HMM PF00347 A0QSG4 No unknown Rv0719 Rv0719 NC_008596.1 Mycobrowser_v3 CDS 1564456 1564839 . + 0 MSMEG_1471 rplR ribosomal protein L18 identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060 A0QSG5 No unknown Rv0720 Rv0720 NC_008596.1 Mycobrowser_v3 CDS 5212083 5212454 . + 0 MSMEG_5111 MSMEG_5111 conserved hypothetical protein A0R2H1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1564865 1565509 . + 0 MSMEG_1472 rpsE ribosomal protein S5 identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021 A0QSG6 No unknown Rv0721 Rv0721 NC_008596.1 Mycobrowser_v3 CDS 1565512 1565697 . + 0 MSMEG_1473 rpmD ribosomal protein L30 identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308 A0QSG7 No unknown Rv0722 Rv0722 NC_008596.1 Mycobrowser_v3 CDS 1565694 1566137 . + 0 MSMEG_1474 rplO ribosomal protein L15 identified by match to protein family HMM PF00256; match to protein family HMM PF01305; match to protein family HMM TIGR01071 A0QSG8 No unknown Rv0723 Rv0723 NC_008596.1 Mycobrowser_v3 CDS 1563192 1563377 . + 0 MSMEG_1468 rpsZ ribosomal protein S14p/S29e identified by match to protein family HMM PF00253 A0QSG2 No unknown Rv0717 Rv0717 NC_008596.1 Mycobrowser_v3 CDS 1566207 1567187 . - 0 MSMEG_1475 MSMEG_1475 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QSG9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1567306 1569090 . + 0 MSMEG_1476 sppA signal peptide peptidase SppA, 67K type identified by match to protein family HMM PF01343; match to protein family HMM TIGR00705; match to protein family HMM TIGR00706 A0QSH0 No unknown Rv0724 Rv0724 NC_008596.1 Mycobrowser_v3 CDS 1569316 1570743 . + 0 MSMEG_1477 MSMEG_1477 major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QSH1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1612201 1612575 . + 0 MSMEG_1521 rpsM ribosomal protein S13p/S18e identified by match to protein family HMM PF00416 A0QSL5 No unknown Rv3460c Rv3460c NC_008596.1 Mycobrowser_v3 CDS 1570776 1571426 . + 0 MSMEG_1478 MSMEG_1478 transporter, LysE family protein identified by match to protein family HMM PF01810 A0QSH2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1571431 1572342 . - 0 MSMEG_1479 MSMEG_1479 methyltransferase, putative, family protein identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 A0QSH3 No unknown Rv0725c Rv0725c NC_008596.1 Mycobrowser_v3 CDS 1572351 1573247 . - 0 MSMEG_1480 MSMEG_1480 methyltransferase identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 A0QSH4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1573257 1574171 . - 0 MSMEG_1481 MSMEG_1481 methyltransferase identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 A0QSH5 No unknown Rv0725c Rv0725c NC_008596.1 Mycobrowser_v3 CDS 1574178 1575092 . - 0 MSMEG_1482 MSMEG_1482 methyltransferase identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 A0QSH6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3679739 3680041 . - 0 MSMEG_3616 MSMEG_3616 integral membrane protein identified by match to protein family HMM PF04226 A0QYD1 No unknown Rv1861 Rv1861 NC_008596.1 Mycobrowser_v3 CDS 1575442 1576767 . + 0 MSMEG_1483 MSMEG_1483 preprotein translocase, SecY subunit identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967 A0QSH7 No unknown Rv0732 Rv0732 NC_008596.1 Mycobrowser_v3 CDS 1576764 1577309 . + 0 MSMEG_1484 MSMEG_1484 adenylate kinase identified by match to protein family HMM PF00406; match to protein family HMM TIGR01351 A0QSH8 No unknown Rv0733 Rv0733 NC_008596.1 Mycobrowser_v3 CDS 1577329 1578126 . + 0 MSMEG_1485 map methionine aminopeptidase, type I identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500 A0QSH9 No unknown Rv0734 Rv0734 NC_008596.1 Mycobrowser_v3 CDS 1578235 1578777 . + 0 MSMEG_1486 MSMEG_1486 RNA polymerase sigma-70 factor identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QSI0 No unknown Rv0735 Rv0735 NC_008596.1 Mycobrowser_v3 CDS 1578774 1579505 . + 0 MSMEG_1487 MSMEG_1487 conserved hypothetical protein A0QSI1 No unknown Rv0736 Rv0736 NC_008596.1 Mycobrowser_v3 CDS 1581389 1582069 . + 0 MSMEG_1489 MSMEG_1489 conserved hypothetical protein A0QSI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1582078 1583100 . + 0 MSMEG_1490 MSMEG_1490 3-oxoacyl-ACP synthase III A0QSI4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1583124 1584137 . + 0 MSMEG_1491 MSMEG_1491 histidinol-phosphate aminotransferase 2 identified by match to protein family HMM PF00155 A0QSI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1584173 1584694 . + 0 MSMEG_1492 MSMEG_1492 transcriptional regulator, MarR family protein identified by match to protein family HMM PF01047 A0QSI6 No unknown Rv0737 Rv0737 NC_008596.1 Mycobrowser_v3 CDS 1584746 1585987 . - 0 MSMEG_1493 MSMEG_1493 sensor histidine kinase identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730 A0QSI7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1585984 1586646 . - 0 MSMEG_1494 MSMEG_1494 transcriptional regulatory protein DegU identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0QSI8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1586745 1587569 . + 0 MSMEG_1495 MSMEG_1495 HAD-superfamily protein hydrolase subfamily protein IA, variant 3, putative identified by match to protein family HMM PF00702 A0QSI9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1587649 1588521 . - 0 MSMEG_1496 mmsB 3-hydroxyisobutyrate dehydrogenase identified by match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR01692 A0QSJ0 No unknown Rv0751c Rv0751c NC_008596.1 Mycobrowser_v3 CDS 1588538 1589725 . - 0 MSMEG_1497 MSMEG_1497 acyl-CoA dehydrogenase family protein member 8 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QSJ1 No unknown Rv0752c Rv0752c NC_008596.1 Mycobrowser_v3 CDS 1602360 1602965 . - 0 MSMEG_1510 MSMEG_1510 dTDP-4-dehydrorhamnose 3,5-epimerase identified by match to protein family HMM PF00908 A0QSK5 No unknown Rv3465 Rv3465 NC_008596.1 Mycobrowser_v3 CDS 1589732 1591252 . - 0 MSMEG_1498 mmsA methylmalonate-semialdehyde dehydrogenase identified by similarity to GB:AAA99190.1; match to protein family HMM PF00171; match to protein family HMM TIGR01722 A0QSJ2 No unknown Rv0753c Rv0753c NC_008596.1 Mycobrowser_v3 CDS 1591424 1592929 . + 0 MSMEG_1499 MSMEG_1499 oxygenase identified by match to protein family HMM PF01266; match to protein family HMM PF01494 A0QSJ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1592926 1593525 . + 0 MSMEG_1500 MSMEG_1500 TetR family protein transcriptional regulatory protein identified by match to protein family HMM PF00440; match to protein family HMM PF02796 A0QSJ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1593619 1594473 . + 0 MSMEG_1501 MSMEG_1501 methyltransferase, putative, family protein identified by match to protein family HMM TIGR00027 A0QSJ5 No unknown Rv2751 Rv2751 NC_008596.1 Mycobrowser_v3 CDS 1594527 1595402 . + 0 MSMEG_1502 MSMEG_1502 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0QSJ6 No unknown Rv2688c Rv2688c NC_008596.1 Mycobrowser_v3 CDS 1595399 1596112 . + 0 MSMEG_1503 MSMEG_1503 probable antibiotic-transport integral membrane leucine and valine rich protein abc transporter A0QSJ7 No unknown Rv2687c Rv2687c NC_008596.1 Mycobrowser_v3 CDS 1596109 1596867 . + 0 MSMEG_1504 MSMEG_1504 probable antibiotic-transport integral membrane leucine and alanine and valine rich protein abc transporter A0QSJ8 No unknown Rv2686c Rv2686c NC_008596.1 Mycobrowser_v3 CDS 1596886 1597764 . - 0 MSMEG_1505 MSMEG_1505 integral membrane protein identified by match to protein family HMM PF00892 A0QSJ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1597761 1598429 . - 0 MSMEG_1506 MSMEG_1506 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QSK0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1612581 1612997 . + 0 MSMEG_1522 rpsK ribosomal protein S11 identified by match to protein family HMM PF00411 A0QSL6 No unknown Rv3459c Rv3459c NC_008596.1 Mycobrowser_v3 CDS 1598476 1599585 . + 0 MSMEG_1507 MSMEG_1507 D-aminopeptidase identified by match to protein family HMM PF03576 A0QSK1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1599585 1601009 . + 0 MSMEG_1508 MSMEG_1508 amino acid permease-associated region identified by match to protein family HMM PF00324 A0QSK2 No unknown Rv1979c Rv1979c NC_008596.1 Mycobrowser_v3 CDS 1601016 1601612 . - 0 MSMEG_1509 MSMEG_1509 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QSK3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1601665 1602363 . + 0 MSMEG_1511 MSMEG_1511 putative oxidoreductase identified by match to protein family HMM PF00881 A0QSK4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3064877 3065413 . - 0 MSMEG_2998 MSMEG_2998 conserved hypothetical protein A0QWM8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1602962 1603957 . - 0 MSMEG_1512 rfbB dTDP-glucose 4,6-dehydratase identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181 A0QSK6 No unknown Rv3464 Rv3464 NC_008596.1 Mycobrowser_v3 CDS 1603984 1604835 . - 0 MSMEG_1513 MSMEG_1513 conserved hypothetical protein A0QSK7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1604864 1605760 . - 0 MSMEG_1514 MSMEG_1514 conserved hypothetical protein A0QSK8 No unknown Rv3463 Rv3463 NC_008596.1 Mycobrowser_v3 CDS 1673236 1673706 . + 0 MSMEG_1584 MSMEG_1584 hypothetical protein identified by Glimmer2; putative A0QSS5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1605862 1607334 . - 0 MSMEG_1515 MSMEG_1515 two-component sensor histidine kinase identified by match to protein family HMM PF00027; match to protein family HMM PF02518 A0QSK9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1607344 1609002 . - 0 MSMEG_1516 MSMEG_1516 thioredoxin reductase identified by match to protein family HMM PF00070; match to protein family HMM PF00072; match to protein family HMM PF01266; match to protein family HMM PF07992 A0QSL0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1609139 1610719 . - 0 MSMEG_1517 MSMEG_1517 spfh domain/band 7 family protein, putative identified by match to protein family HMM PF01145 A0QSL1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1610744 1611241 . - 0 MSMEG_1518 MSMEG_1518 hypothetical protein identified by Glimmer2; putative A0QSL2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1611597 1611818 . + 0 MSMEG_1519 infA translation initiation factor IF-1 identified by match to protein family HMM PF00575; match to protein family HMM PF01176; match to protein family HMM TIGR00008 A0QSL3 No unknown Rv3462c Rv3462c NC_008596.1 Mycobrowser_v3 CDS 1611901 1612014 . + 0 MSMEG_1520 rpmJ ribosomal protein L36 identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022 A0QSL4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1613023 1613628 . + 0 MSMEG_1523 rpsD ribosomal protein S4 identified by match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017 A0QSL7 No unknown Rv3458c Rv3458c NC_008596.1 Mycobrowser_v3 CDS 1613721 1614773 . + 0 MSMEG_1524 rpoA DNA-directed RNA polymerase, alpha subunit identified by match to protein family HMM PF01000; match to protein family HMM PF01193; match to protein family HMM PF03118; match to protein family HMM TIGR02027 A0QSL8 No unknown Rv3457c Rv3457c NC_008596.1 Mycobrowser_v3 CDS 1614848 1615447 . + 0 MSMEG_1525 MSMEG_1525 50S ribosomal protein L17 identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059 A0QSL9 No unknown Rv3456c Rv3456c NC_008596.1 Mycobrowser_v3 CDS 1615467 1616342 . + 0 MSMEG_1527 truA tRNA pseudouridine synthase A identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071 A0QSM0 No unknown Rv3455c Rv3455c NC_008596.1 Mycobrowser_v3 CDS 1616339 1617031 . - 0 MSMEG_1526 MSMEG_1526 probable cutinase identified by match to protein family HMM PF01083 A0QSM1 No unknown Rv2301 Rv2301 NC_008596.1 Mycobrowser_v3 CDS 1617095 1617769 . - 0 MSMEG_1528 MSMEG_1528 cutinase identified by match to protein family HMM PF01083 A0QSM2 No unknown Rv3452 Rv3452 NC_008596.1 Mycobrowser_v3 CDS 1617806 1618441 . - 0 MSMEG_1529 MSMEG_1529 serine esterase, cutinase family protein identified by match to protein family HMM PF01083 A0QSM3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1673703 1674266 . + 0 MSMEG_1585 MSMEG_1585 cupin domain protein identified by match to protein family HMM PF07883 A0QSS6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1618493 1619572 . - 0 MSMEG_1530 MSMEG_1530 integral membrane protein identified by match to protein family HMM PF00892 A0QSM4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1619643 1620203 . + 0 MSMEG_1531 MSMEG_1531 conserved hypothetical protein identified by match to protein family HMM PF07336 A0QSM5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1620225 1620545 . - 0 MSMEG_1532 MSMEG_1532 antibiotic biosynthesis monooxygenase identified by match to protein family HMM PF03992 A0QSM6 No unknown Rv1117 Rv1117 NC_008596.1 Mycobrowser_v3 CDS 1628401 1629507 . + 0 MSMEG_1537 MSMEG_1537 conserved hypothetical protein A0QSN1 No unknown Rv3446c Rv3446c NC_008596.1 Mycobrowser_v3 CDS 1629580 1629891 . + 0 MSMEG_1538 MSMEG_1538 conserved hypothetical protein A0QSN2 No unknown Rv3445c Rv3445c NC_008596.1 Mycobrowser_v3 CDS 1629917 1630213 . + 0 MSMEG_1539 MSMEG_1539 conserved hypothetical protein A0QSN3 No unknown Rv3444c Rv3444c NC_008596.1 Mycobrowser_v3 CDS 1646296 1646739 . + 0 MSMEG_1556 rplM ribosomal protein L13 identified by match to protein family HMM PF00572; match to protein family HMM TIGR01066 A0QSP8 No unknown Rv3443c Rv3443c NC_008596.1 Mycobrowser_v3 CDS 1630283 1631665 . - 0 MSMEG_1540 MSMEG_1540 ATP-dependent RNA helicase identified by match to protein family HMM PF00270; match to protein family HMM PF00271 A0QSN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1631708 1631833 . + 0 MSMEG_1541 MSMEG_1541 hypothetical protein identified by Glimmer2; putative A0QSN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1631951 1633222 . + 0 MSMEG_1542 MSMEG_1542 transcriptional regulator identified by match to protein family HMM PF00486; match to protein family HMM PF01590 A0QSN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1633314 1634858 . + 0 MSMEG_1543 MSMEG_1543 eptc-inducible aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0QSN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1635013 1635411 . + 0 MSMEG_1544 MSMEG_1544 PduO protein identified by match to protein family HMM PF03928 A0QSN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1635427 1636125 . - 0 MSMEG_1545 MSMEG_1545 conserved hypothetical protein A0QSN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1636280 1636708 . + 0 MSMEG_1546 MSMEG_1546 coenzyme B12-dependent glycerol dehydrogenase small subunit identified by match to protein family HMM PF02287 A0QSP0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1636718 1638430 . + 0 MSMEG_1547 MSMEG_1547 glycerol dehydratase large subunit identified by match to protein family HMM PF02286 A0QSP1,A4ZHR7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1638427 1639029 . + 0 MSMEG_1548 MSMEG_1548 propanediol utilization: dehydratase, medium subunit identified by match to protein family HMM PF02288 A0QSP2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1640922 1641263 . + 0 MSMEG_1550 MSMEG_1550 PduH protein A0QSP3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1641323 1641517 . - 0 MSMEG_1551 MSMEG_1551 hypothetical protein identified by Glimmer2; putative A0QSP4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6858852 6860640 . + 0 MSMEG_6810 MSMEG_6810 nitric oxide reductase activase protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00092 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 1641497 1642909 . + 0 MSMEG_1552 eat ethanolamine permease identified by match to protein family HMM PF00324; match to protein family HMM TIGR00908 A0QSP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1642906 1644321 . + 0 MSMEG_1553 eutB ethanolamine ammonia-lyase, large subunit identified by match to protein family HMM PF06751 A0QSP6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1644318 1645094 . + 0 MSMEG_1554 eutC ethanolamine ammonia-lyase, light chain identified by match to protein family HMM PF05985 A0QSP7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1646736 1647188 . + 0 MSMEG_1557 rpsI ribosomal protein S9 identified by match to protein family HMM PF00380 A0QSP9 No unknown Rv3442c Rv3442c NC_008596.1 Mycobrowser_v3 CDS 1647548 1648012 . + 0 MSMEG_1558 MSMEG_1558 conserved hypothetical protein A0QSQ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1648164 1649525 . + 0 MSMEG_1559 glmM phosphoglucosamine mutase identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455 A0QSQ1 No unknown Rv3441c Rv3441c NC_008596.1 Mycobrowser_v3 CDS 1649573 1649881 . + 0 MSMEG_1560 MSMEG_1560 conserved hypothetical protein A0QSQ2 No unknown Rv3440c Rv3440c NC_008596.1 Mycobrowser_v3 CDS 1651286 1652176 . - 0 MSMEG_1561 MSMEG_1561 LysR-family protein trancsriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QSQ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1652167 1652964 . + 0 MSMEG_1563 MSMEG_1563 short-chain dehydrogenase/reductase SDR A0QSQ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1652977 1654452 . - 0 MSMEG_1564 MSMEG_1564 lignostilbene-alpha,beta-dioxygenase identified by match to protein family HMM PF03055 A0QSQ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1654695 1655318 . + 0 MSMEG_1565 MSMEG_1565 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QSQ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1667952 1668419 . + 0 MSMEG_1577 MSMEG_1577 conserved hypothetical protein identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150 A0QSR8 No unknown Rv3422c Rv3422c NC_008596.1 Mycobrowser_v3 CDS 1655346 1656389 . - 0 MSMEG_1566 MSMEG_1566 oxidoreductase identified by match to protein family HMM PF00296 A0QSQ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1656437 1657288 . - 0 MSMEG_1567 MSMEG_1567 conserved hypothetical protein A0QSQ8 No unknown Rv3438 Rv3438 NC_008596.1 Mycobrowser_v3 CDS 1674284 1675408 . - 0 MSMEG_1586 MSMEG_1586 beta-lactamase identified by match to protein family HMM PF00144 A0QSS7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1657467 1659353 . + 0 MSMEG_1568 glmS glucosamine--fructose-6-phosphate aminotransferase, isomerizing identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135 O68956 No unknown NC_008596.1 Mycobrowser_v3 CDS 1659357 1660295 . + 0 MSMEG_1570 MSMEG_1570 carboxylesterase identified by match to protein family HMM PF00561 A0QSR0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1660216 1660425 . - 0 MSMEG_1569 MSMEG_1569 hypothetical protein identified by Glimmer2; putative A0QSR1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1660346 1661329 . - 0 MSMEG_1571 MSMEG_1571 integral membrane protein identified by match to protein family HMM PF00892 A0QSR2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1661357 1662760 . + 0 MSMEG_1572 MSMEG_1572 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00155; match to protein family HMM PF00392 A0QSR3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1662840 1664252 . + 0 MSMEG_1573 MSMEG_1573 carbohydrate kinase family protein identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197 A0QSR4 No unknown Rv3433c Rv3433c NC_008596.1 Mycobrowser_v3 CDS 1858875 1859117 . - 0 MSMEG_1770 MSMEG_1770 conserved hypothetical protein identified by match to protein family HMM PF05532 A0QTA4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1664273 1665652 . + 0 MSMEG_1574 MSMEG_1574 glutamate decarboxylase identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788 A0QSR5 No unknown Rv3432c Rv3432c NC_008596.1 Mycobrowser_v3 CDS 1665708 1666877 . + 0 MSMEG_1575 alr alanine racemase identified by similarity to SP:P10725; match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492 A0QSR6 No unknown Rv3423c Rv3423c NC_008596.1 Mycobrowser_v3 CDS 1666901 1667959 . + 0 MSMEG_1576 MSMEG_1576 alpha/beta hydrolase fold identified by match to protein family HMM PF00561 A0QSR7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2050405 2050770 . + 0 MSMEG_1969 MSMEG_1969 MerR-family protein transcriptional regulator identified by match to protein family HMM PF00376 A0QTU6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1668416 1669060 . + 0 MSMEG_1578 MSMEG_1578 peptidase M22, glycoprotease identified by match to protein family HMM PF00814 A0QSR9 No unknown Rv3421c Rv3421c NC_008596.1 Mycobrowser_v3 CDS 1669057 1669533 . + 0 MSMEG_1579 rimI ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575 A0QSS0 No unknown Rv3420c Rv3420c NC_008596.1 Mycobrowser_v3 CDS 1669530 1670552 . + 0 MSMEG_1580 MSMEG_1580 O-sialoglycoprotein endopeptidase identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329 A0QSS1 No unknown Rv3419c Rv3419c NC_008596.1 Mycobrowser_v3 CDS 1675529 1675864 . + 0 MSMEG_1588 MSMEG_1588 conserved hypothetical protein A0QSS8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1675840 1676820 . - 0 MSMEG_1587 MSMEG_1587 alpha/beta hydrolase fold A0QSS9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1676817 1677860 . - 0 MSMEG_1589 MSMEG_1589 hypothetical protein identified by Glimmer2; putative A0QST0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1677871 1678182 . + 0 MSMEG_1590 MSMEG_1590 hypothetical protein identified by Glimmer2; putative A0QST1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1678351 1679754 . + 0 MSMEG_1591 MSMEG_1591 TnpC protein identified by match to protein family HMM PF01609 A0QS12 No unknown NC_008596.1 Mycobrowser_v3 CDS 1671178 1671480 . + 0 MSMEG_1582 groS chaperonin GroS identified by match to protein family HMM PF00166 A0QSS3 No unknown Rv3418c Rv3418c NC_008596.1 Mycobrowser_v3 CDS 1680305 1681108 . + 0 MSMEG_1592 MSMEG_1592 hypothetical protein identified by Glimmer2; putative A0QST3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1681151 1681948 . + 0 MSMEG_1594 MSMEG_1594 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QST4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1681937 1682101 . - 0 MSMEG_1593 MSMEG_1593 hypothetical protein identified by Glimmer2; putative A0QST5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1797877 1798974 . + 0 MSMEG_1704 MSMEG_1704 ABC transporter A0QT42 No unknown NC_008596.1 Mycobrowser_v3 CDS 1682146 1682877 . - 0 MSMEG_1595 MSMEG_1595 putative oxidoreductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993 A0QST6 No unknown Rv3174 Rv3174 NC_008596.1 Mycobrowser_v3 CDS 1682974 1683543 . + 0 MSMEG_1596 MSMEG_1596 transcriptional regulator identified by match to protein family HMM PF00440 A0QST7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1683664 1683954 . - 0 MSMEG_1597 MSMEG_1597 Transcription factor WhiB identified by match to protein family HMM PF02467 A0QST8 No unknown Rv3416 Rv3416 NC_008596.1 Mycobrowser_v3 CDS 1684388 1685194 . + 0 MSMEG_1598 MSMEG_1598 conserved hypothetical protein A0QST9 No unknown Rv3415c Rv3415c NC_008596.1 Mycobrowser_v3 CDS 1685284 1685862 . + 0 MSMEG_1599 MSMEG_1599 RNA polymerase sigma-70 factor identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QSU0 No unknown Rv3414c Rv3414c NC_008596.1 Mycobrowser_v3 tRNA 2047596 2047672 . + 0 MSMEG_1965 MSMEG_1965 tRNA-Met No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 1685855 1687054 . + 0 MSMEG_1600 MSMEG_1600 conserved hypothetical protein A0QSU1 No unknown Rv3413c Rv3413c NC_008596.1 Mycobrowser_v3 CDS 1687085 1687495 . - 0 MSMEG_1601 MSMEG_1601 conserved hypothetical protein A0QSU2 No unknown Rv3412 Rv3412 NC_008596.1 Mycobrowser_v3 CDS 1687637 1689178 . + 0 MSMEG_1602 guaB inosine-5'-monophosphate dehydrogenase identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302 A0QSU3 No unknown Rv3411c Rv3411c NC_008596.1 Mycobrowser_v3 CDS 1689207 1690334 . + 0 MSMEG_1603 MSMEG_1603 IMP dehydrogenase family protein identified by match to protein family HMM PF00478; match to protein family HMM TIGR01304 A0QSU4 No unknown Rv3410c Rv3410c NC_008596.1 Mycobrowser_v3 CDS 1738323 1739228 . - 0 MSMEG_1644 MSMEG_1644 hypothetical protein identified by Glimmer2; putative A0QSY3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1690403 1692139 . + 0 MSMEG_1604 MSMEG_1604 FAD dependent oxidoreductase identified by match to protein family HMM PF00037; match to protein family HMM PF01266 A0QSU5 No unknown Rv3409c Rv3409c NC_008596.1 Mycobrowser_v3 CDS 1692222 1692881 . + 0 MSMEG_1605 phoU phosphate transport system regulatory protein PhoU identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135 A0QSU6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1693036 1694649 . + 0 MSMEG_1606 MSMEG_1606 benzoylformate decarboxylase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 A0QSU7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1694678 1695097 . + 0 MSMEG_1607 MSMEG_1607 putative tautomerase A0QSU8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1695107 1697470 . - 0 MSMEG_1608 MSMEG_1608 glycosyl transferase identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636 A0QSU9 No unknown Rv3401 Rv3401 NC_008596.1 Mycobrowser_v3 CDS 1698411 1699973 . + 0 MSMEG_1610 MSMEG_1610 glutamine-hydrolyzing GMP synthase identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888 A0QSV0 No unknown Rv3396c Rv3396c NC_008596.1 Mycobrowser_v3 CDS 1699984 1700661 . + 0 MSMEG_1611 MSMEG_1611 transcriptional regulator, TetR family protein, putative identified by match to protein family HMM PF00440 A0QSV1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1700804 1701661 . + 0 MSMEG_1612 MSMEG_1612 extracellular solute-binding protein, family protein 3 identified by match to protein family HMM PF00497 A0QSV2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1701672 1702463 . + 0 MSMEG_1613 MSMEG_1613 ABC polar amino acid transporter, inner membrane subunit identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 A0QSV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1702467 1703264 . + 0 MSMEG_1614 MSMEG_1614 glutamine transport ATP-binding protein GlnQ identified by match to protein family HMM PF00005 A0QSV4 No unknown Rv2564 Rv2564 NC_008596.1 Mycobrowser_v3 CDS 1703278 1704852 . + 0 MSMEG_1615 ggt gamma-glutamyltranspeptidase identified by match to protein family HMM PF01019 A0QSV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1751775 1752596 . + 0 MSMEG_1656 xth exodeoxyribonuclease III identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633 A0QSZ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1706845 1708497 . - 0 MSMEG_1617 MSMEG_1617 kumamolisin A0QSV6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1709234 1709941 . + 0 MSMEG_1620 MSMEG_1620 conserved hypothetical protein A0QSV9 No unknown Rv3395c Rv3395c NC_008596.1 Mycobrowser_v3 CDS 1709944 1711521 . + 0 MSMEG_1622 MSMEG_1622 putative DNA repair polymerase A0QSW0 No unknown Rv3394c Rv3394c NC_008596.1 Mycobrowser_v3 CDS 1711512 1712564 . - 0 MSMEG_1621 MSMEG_1621 pyrimidine-specific ribonucleoside hydrolase RihA identified by match to protein family HMM PF01156 A0QSW1 No unknown Rv3393 Rv3393 NC_008596.1 Mycobrowser_v3 CDS 1712618 1714654 . - 0 MSMEG_1623 MSMEG_1623 short chain dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993 A0QSW2 No unknown Rv3391 Rv3391 NC_008596.1 Mycobrowser_v3 CDS 1714853 1715740 . + 0 MSMEG_1624 MSMEG_1624 universal stress protein family protein A0QSW3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1888189 1888473 . - 0 MSMEG_1812 MSMEG_1812 conserved hypothetical protein A0QTE6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1715737 1717305 . + 0 MSMEG_1625 MSMEG_1625 amino acid transporter, putative identified by match to protein family HMM PF00324 A0QSW4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1717307 1718188 . - 0 MSMEG_1626 MSMEG_1626 putative DNA-binding protein A0QSW5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1718346 1719197 . + 0 MSMEG_1628 MSMEG_1628 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0QSW6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1719178 1719336 . - 0 MSMEG_1627 MSMEG_1627 hypothetical protein identified by Glimmer2; putative A0QSW7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1719261 1720430 . - 0 MSMEG_1629 MSMEG_1629 hypothetical protein identified by Glimmer2; putative A0QSW8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1720546 1721337 . - 0 MSMEG_1630 MSMEG_1630 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase identified by match to protein family HMM PF00106 A0QSW9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1721434 1722288 . + 0 MSMEG_1631 MSMEG_1631 DNA-binding protein A0QSX0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1739234 1740454 . - 0 MSMEG_1645 MSMEG_1645 NADH:flavin oxidoreductase/nadh oxidase identified by match to protein family HMM PF00724 A0QSY4 No unknown Rv3359 Rv3359 NC_008596.1 Mycobrowser_v3 CDS 1722325 1725612 . + 0 MSMEG_1633 MSMEG_1633 DNA polymerase III, alpha subunit, putative identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594 A0QSX1 No unknown Rv3370c Rv3370c NC_008596.1 Mycobrowser_v3 CDS 1725589 1726479 . - 0 MSMEG_1632 MSMEG_1632 hypothetical protein identified by Glimmer2; putative A0QSX2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1726761 1727360 . + 0 MSMEG_1634 MSMEG_1634 probable forkhead-associated protein A0QSX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1727405 1728046 . + 0 MSMEG_1635 MSMEG_1635 nitroreductase family protein identified by match to protein family HMM PF00881 A0QSX4 No unknown Rv3368c Rv3368c NC_008596.1 Mycobrowser_v3 CDS 1728064 1728528 . - 0 MSMEG_1636 MSMEG_1636 RNA methyltransferase, TrmH family protein, group 2 identified by match to protein family HMM PF00588 A0QSX5 No unknown Rv3366 Rv3366 NC_008596.1 Mycobrowser_v3 CDS 1728945 1731728 . + 0 MSMEG_1637 MSMEG_1637 periplasmic sensor signal transduction histidine kinase identified by match to protein family HMM PF00672; match to protein family HMM PF02518 A0QSX6 No unknown Rv3365c Rv3365c NC_008596.1 Mycobrowser_v3 CDS 1731725 1732132 . + 0 MSMEG_1638 MSMEG_1638 Roadblock/LC7 domain protein identified by match to protein family HMM PF03259 A0QSX7 No unknown Rv3364c Rv3364c NC_008596.1 Mycobrowser_v3 CDS 1732149 1732514 . + 0 MSMEG_1639 MSMEG_1639 conserved hypothetical protein identified by match to protein family HMM PF05331 A0QSX8 No unknown Rv3363c Rv3363c NC_008596.1 Mycobrowser_v3 CDS 1732495 1733076 . + 0 MSMEG_1640 MSMEG_1640 ATP/GTP-binding protein identified by match to protein family HMM PF03029 A0QSX9 No unknown Rv3362c Rv3362c NC_008596.1 Mycobrowser_v3 CDS 1733082 1733657 . + 0 MSMEG_1641 MSMEG_1641 conserved hypothetical protein identified by match to protein family HMM PF00805 A0QSY0 No unknown Rv3361c Rv3361c NC_008596.1 Mycobrowser_v3 CDS 1733760 1736459 . - 0 MSMEG_1642 MSMEG_1642 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061 A0QSY1 No unknown Rv1747 Rv1747 NC_008596.1 Mycobrowser_v3 CDS 1736549 1738318 . + 0 MSMEG_1643 MSMEG_1643 hypothetical protein identified by Glimmer2; putative A0QSY2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1740535 1741386 . + 0 MSMEG_1647 MSMEG_1647 tetrahydrofolate dehydrogenase/cyclohydrolase FolD identified by match to protein family HMM PF00763; match to protein family HMM PF02882 A0QSY5 No unknown Rv3356c Rv3356c NC_008596.1 Mycobrowser_v3 CDS 1741293 1742453 . - 0 MSMEG_1646 MSMEG_1646 ribosomal RNA adenine dimethylase family protein identified by match to protein family HMM PF00398 A0QSY6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1742683 1743300 . + 0 MSMEG_1648 MSMEG_1648 putative transcriptional regulator identified by match to protein family HMM PF00440 A0QSY7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1743297 1744841 . + 0 MSMEG_1649 MSMEG_1649 FAD dependent oxidoreductase identified by match to protein family HMM PF01266; match to protein family HMM PF01494 A0QSY8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1744845 1745582 . - 0 MSMEG_1650 MSMEG_1650 methyltransferase type 11 A0QSY9 No unknown Rv3342 Rv3342 NC_008596.1 Mycobrowser_v3 CDS 1903244 1903792 . - 0 MSMEG_1827 MSMEG_1827 hydrolase, nudix family protein, putative identified by match to protein family HMM PF00293 A0QTG0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1745579 1746721 . - 0 MSMEG_1651 metX homoserine O-acetyltransferase identified by match to protein family HMM PF00561; match to protein family HMM TIGR01392 A0QSZ0 No unknown Rv3341 Rv3341 NC_008596.1 Mycobrowser_v3 CDS 1746742 1748073 . - 0 MSMEG_1652 MSMEG_1652 O-acetylhomoserine sulfhydrylase identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326 A0QSZ1 No unknown Rv3340 Rv3340 NC_008596.1 Mycobrowser_v3 CDS 1748300 1748419 . - 0 MSMEG_1653 MSMEG_1653 hypothetical protein identified by Glimmer2; putative A0QSZ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2865884 2866366 . - 0 MSMEG_2800 MSMEG_2800 NADPH-dependent fmn reductase identified by match to protein family HMM PF03358 A0QW43 No unknown NC_008596.1 Mycobrowser_v3 CDS 1748543 1750774 . + 0 MSMEG_1654 MSMEG_1654 isocitrate dehydrogenase, NADP-dependent identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178 A0QSZ3 No unknown Rv0066c Rv0066c NC_008596.1 Mycobrowser_v3 CDS 1750851 1751690 . - 0 MSMEG_1655 MSMEG_1655 hydrolase, alpha/beta fold family protein, putative identified by match to protein family HMM PF00561 A0QSZ4 No unknown Rv3338 Rv3338 NC_008596.1 Mycobrowser_v3 CDS 2866445 2866564 . + 0 MSMEG_2801 MSMEG_2801 hypothetical protein identified by Glimmer2; putative A0QW44 No unknown NC_008596.1 Mycobrowser_v3 CDS 1752612 1753628 . + 0 MSMEG_1657 trpS tryptophanyl-tRNA synthetase identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233 A0QSZ6 No unknown Rv3336c Rv3336c NC_008596.1 Mycobrowser_v3 CDS 1753643 1754680 . + 0 MSMEG_1658 MSMEG_1658 ribonuclease, putative identified by match to protein family HMM PF03631; match to protein family HMM TIGR00766 A0QSZ7 No unknown Rv3335c Rv3335c NC_008596.1 Mycobrowser_v3 CDS 1754723 1755040 . - 0 MSMEG_1659 MSMEG_1659 multidrug resistance protein, SMR family protein identified by match to protein family HMM PF00893 A0QSZ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1755150 1756019 . + 0 MSMEG_1660 MSMEG_1660 oxidoreductase, 2-nitropropane dioxygenase family protein identified by match to protein family HMM PF03060 A0QSZ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1756022 1757215 . - 0 MSMEG_1661 MSMEG_1661 D-alanyl-D-alanine carboxypeptidase identified by match to protein family HMM PF00768 A0QT00 No unknown Rv3330 Rv3330 NC_008596.1 Mycobrowser_v3 CDS 1757394 1758779 . - 0 MSMEG_1662 MSMEG_1662 taurine-pyruvate aminotransferase identified by match to protein family HMM PF00202 A0QT01 No unknown Rv3329 Rv3329 NC_008596.1 Mycobrowser_v3 CDS 1758776 1759246 . - 0 MSMEG_1663 MSMEG_1663 transcriptional regulator, AsnC family protein identified by match to protein family HMM PF01037 A0QT02 No unknown NC_008596.1 Mycobrowser_v3 CDS 1759209 1759499 . - 0 MSMEG_1664 MSMEG_1664 hypothetical protein identified by Glimmer2; putative A0QT03 No unknown NC_008596.1 Mycobrowser_v3 CDS 1759434 1760915 . + 0 MSMEG_1665 MSMEG_1665 aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 A0QT04 No unknown NC_008596.1 Mycobrowser_v3 CDS 1761019 1761933 . + 0 MSMEG_1666 MSMEG_1666 RNA polymerase sigma-70 factor identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QT05 No unknown Rv3328c Rv3328c NC_008596.1 Mycobrowser_v3 CDS 1761933 1762454 . + 0 MSMEG_1668 MSMEG_1668 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0QT06 No unknown NC_008596.1 Mycobrowser_v3 CDS 1763124 1763909 . - 0 MSMEG_1669 sdhB succinate dehydrogenase, iron-sulfur protein identified by similarity to SP:P51053; match to protein family HMM TIGR00384 A0QT07 No unknown Rv3319 Rv3319 NC_008596.1 Mycobrowser_v3 CDS 1763912 1765666 . - 0 MSMEG_1670 sdhA succinate dehydrogenase, flavoprotein subunit identified by similarity to SP:P31038; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816 A0QT08 No unknown Rv3318 Rv3318 NC_008596.1 Mycobrowser_v3 CDS 1765677 1766147 . - 0 MSMEG_1671 MSMEG_1671 succinate dehydrogenase hydrophobic membrane anchor protein SdhD A0QT09 No unknown Rv3317 Rv3317 NC_008596.1 Mycobrowser_v3 CDS 1766144 1766560 . - 0 MSMEG_1672 sdhC succinate dehydrogenase, cytochrome b556 subunit identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970 A0QT10 No unknown Rv3316 Rv3316 NC_008596.1 Mycobrowser_v3 CDS 1766790 1767176 . + 0 MSMEG_1673 cdd cytidine deaminase identified by match to protein family HMM PF00383; match to protein family HMM TIGR01354 A0QT11 No unknown Rv3315c Rv3315c NC_008596.1 Mycobrowser_v3 CDS 1767247 1767342 . - 0 MSMEG_1674 MSMEG_1674 hypothetical protein identified by Glimmer2; putative A0QT12 No unknown NC_008596.1 Mycobrowser_v3 CDS 3905761 3906219 . - 0 MSMEG_3836 MSMEG_3836 conserved hypothetical protein A0QYY9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1767305 1768546 . + 0 MSMEG_1675 MSMEG_1675 pyrimidine-nucleoside phosphorylase identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644 A0QT13 No unknown Rv3314c Rv3314c NC_008596.1 Mycobrowser_v3 CDS 1768749 1769849 . + 0 MSMEG_1676 add adenosine deaminase identified by match to protein family HMM PF00962; match to protein family HMM TIGR01430 A0QT14 No unknown Rv3313c Rv3313c NC_008596.1 Mycobrowser_v3 CDS 1769956 1770891 . + 0 MSMEG_1678 MSMEG_1678 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QT15 No unknown NC_008596.1 Mycobrowser_v3 CDS 1770884 1772305 . - 0 MSMEG_1677 aspA aspartate ammonia-lyase identified by match to protein family HMM PF00206 A0QT16 No unknown NC_008596.1 Mycobrowser_v3 CDS 1939568 1939957 . - 0 MSMEG_1863 MSMEG_1863 putative transposase A0QT61 No unknown NC_008596.1 Mycobrowser_v3 CDS 1772302 1773459 . - 0 MSMEG_1679 MSMEG_1679 AmiB identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891 A0QT17 No unknown NC_008596.1 Mycobrowser_v3 CDS 1773456 1774130 . - 0 MSMEG_1680 MSMEG_1680 conserved hypothetical protein identified by match to protein family HMM PF06267 A0QT18 No unknown NC_008596.1 Mycobrowser_v3 CDS 1774127 1774570 . - 0 MSMEG_1681 MSMEG_1681 endoribonuclease L-PSP superfamily protein identified by match to protein family HMM PF01042 A0QT19 No unknown NC_008596.1 Mycobrowser_v3 CDS 1892734 1893252 . + 0 MSMEG_1818 MSMEG_1818 Bacterial membrane flanked domain protein identified by match to protein family HMM PF03703 A0QTF0 No unknown Rv3278c Rv3278c NC_008596.1 Mycobrowser_v3 CDS 1774567 1775832 . - 0 MSMEG_1682 MSMEG_1682 flavin-containing monooxygenase FMO A0QT20 No unknown NC_008596.1 Mycobrowser_v3 CDS 1775984 1777435 . - 0 MSMEG_1683 MSMEG_1683 cytosine/purine/uracil/thiamine/allantoin permease family protein identified by match to protein family HMM PF02133 A0QT21 No unknown NC_008596.1 Mycobrowser_v3 CDS 1844249 1844629 . + 0 MSMEG_1754 MSMEG_1754 conserved hypothetical protein A0QT88 No unknown NC_008596.1 Mycobrowser_v3 CDS 1777578 1778873 . - 0 MSMEG_1684 MSMEG_1684 conserved hypothetical protein A0QT22 No unknown Rv3311 Rv3311 NC_008596.1 Mycobrowser_v3 CDS 1778947 1779114 . - 0 MSMEG_1685 MSMEG_1685 hypothetical protein identified by Glimmer2; putative A0QT23 No unknown NC_008596.1 Mycobrowser_v3 CDS 1779111 1780178 . - 0 MSMEG_1686 MSMEG_1686 NPL/P60-family protein secreted protein identified by match to protein family HMM PF00877 A0QT24 No unknown NC_008596.1 Mycobrowser_v3 CDS 1780185 1780475 . - 0 MSMEG_1687 MSMEG_1687 hypothetical protein identified by Glimmer2; putative A0QT25 No unknown NC_008596.1 Mycobrowser_v3 CDS 1780527 1780937 . - 0 MSMEG_1688 MSMEG_1688 cupin domain protein identified by match to protein family HMM PF07883 A0QT26 No unknown NC_008596.1 Mycobrowser_v3 CDS 2002965 2003444 . - 0 MSMEG_1924 MSMEG_1924 N-acetyltransferase Ats1 identified by match to protein family HMM PF00583 A0QTQ2 No unknown Rv3216 Rv3216 NC_008596.1 Mycobrowser_v3 CDS 1780950 1781672 . - 0 MSMEG_1689 MSMEG_1689 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993 A0QT27 No unknown NC_008596.1 Mycobrowser_v3 CDS 1781688 1782320 . - 0 MSMEG_1690 MSMEG_1690 putative ECF sigma factor RpoE1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QT28 No unknown NC_008596.1 Mycobrowser_v3 CDS 1782369 1785062 . - 0 MSMEG_1691 MSMEG_1691 transcriptional regulatory protein identified by match to protein family HMM PF00196 A0QT29 No unknown NC_008596.1 Mycobrowser_v3 CDS 1842253 1843281 . - 0 MSMEG_1751 MSMEG_1751 norsolorinic acid reductase identified by match to protein family HMM PF00248 A0QT85 No unknown NC_008596.1 Mycobrowser_v3 CDS 1785177 1786091 . + 0 MSMEG_1692 MSMEG_1692 ECF-family protein RNA polymerase sigma factor identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02957 A0QT30 No unknown NC_008596.1 Mycobrowser_v3 CDS 1800501 1801760 . + 0 MSMEG_1706 MSMEG_1706 xylose transport system permease protein XylH identified by match to protein family HMM PF02653 A0QT44 No unknown NC_008596.1 Mycobrowser_v3 CDS 1786092 1787828 . - 0 MSMEG_1693 MSMEG_1693 succinate dehydrogenase [ubiquinone] flavoprotein subunit identified by match to protein family HMM PF00890; match to protein family HMM PF02910 A0QT31 No unknown NC_008596.1 Mycobrowser_v3 CDS 1873863 1874426 . - 0 MSMEG_1793 MSMEG_1793 membrane protein A0QTC8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1787883 1788506 . + 0 MSMEG_1694 upp uracil phosphoribosyltransferase identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091 A0QT32 No unknown Rv3309c Rv3309c NC_008596.1 Mycobrowser_v3 CDS 1788531 1790147 . - 0 MSMEG_1695 MSMEG_1695 phosphoglucomutase/phosphomannomutase identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880 A0QT33 No unknown Rv3308 Rv3308 NC_008596.1 Mycobrowser_v3 CDS 1790144 1790620 . - 0 MSMEG_1696 MSMEG_1696 regulatory protein, MarR identified by match to protein family HMM PF01047 A0QT34 No unknown NC_008596.1 Mycobrowser_v3 CDS 1790726 1791835 . + 0 MSMEG_1698 MSMEG_1698 putative ammonia monooxygenase superfamily protein identified by match to protein family HMM PF05145; match to protein family HMM TIGR03082 A0QT35 No unknown NC_008596.1 Mycobrowser_v3 CDS 1791793 1792557 . - 0 MSMEG_1697 MSMEG_1697 hypothetical protein identified by Glimmer2; putative A0QT36 No unknown NC_008596.1 Mycobrowser_v3 CDS 1792582 1793730 . - 0 MSMEG_1699 MSMEG_1699 pentachlorophenol 4-monooxygenase identified by match to protein family HMM PF01266; match to protein family HMM PF01494 A0QT37 No unknown NC_008596.1 Mycobrowser_v3 CDS 1793829 1794374 . + 0 MSMEG_1700 MSMEG_1700 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QT38 No unknown NC_008596.1 Mycobrowser_v3 CDS 2033351 2033593 . + 0 MSMEG_1956 MSMEG_1956 hypothetical protein identified by Glimmer2; putative A0QTT3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1794381 1795175 . - 0 MSMEG_1701 MSMEG_1701 purine nucleotide phosphorylase identified by match to protein family HMM PF00896; match to protein family HMM TIGR01697; match to protein family HMM TIGR01698 A0QT39 No unknown Rv3307 Rv3307 NC_008596.1 Mycobrowser_v3 CDS 1795223 1796407 . + 0 MSMEG_1702 MSMEG_1702 amidohydrolase identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891 A0QT40 No unknown Rv3306c Rv3306c NC_008596.1 Mycobrowser_v3 CDS 1796404 1797576 . + 0 MSMEG_1703 MSMEG_1703 amidohydrolase identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891 A0QT41 No unknown Rv3305c Rv3305c NC_008596.1 Mycobrowser_v3 CDS 1843338 1843448 . - 0 MSMEG_1752 MSMEG_1752 hypothetical protein identified by Glimmer2; putative A0QT86 No unknown NC_008596.1 Mycobrowser_v3 CDS 1798971 1800500 . + 0 MSMEG_1705 MSMEG_1705 D-xylose transport ATP-binding protein XylG identified by match to protein family HMM PF00005 A0QT43 No unknown NC_008596.1 Mycobrowser_v3 CDS 1801804 1802463 . - 0 MSMEG_1707 MSMEG_1707 phosphatase YfbT identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509 A0QT45 No unknown NC_008596.1 Mycobrowser_v3 CDS 1802474 1803478 . - 0 MSMEG_1708 MSMEG_1708 ribose operon repressor, putative identified by similarity to SP:P03023; match to protein family HMM PF00356; match to protein family HMM PF00532 A0QT46 No unknown NC_008596.1 Mycobrowser_v3 CDS 1803499 1804524 . - 0 MSMEG_1709 MSMEG_1709 inner membrane ABC transporter permease protein YjfF identified by match to protein family HMM PF02653 A0QT47 No unknown NC_008596.1 Mycobrowser_v3 CDS 1804521 1805594 . - 0 MSMEG_1710 MSMEG_1710 ribose transport system permease protein RbsC identified by match to protein family HMM PF02653 A0QT48 No unknown NC_008596.1 Mycobrowser_v3 CDS 1805591 1807099 . - 0 MSMEG_1711 MSMEG_1711 ATP binding protein of ABC transporter identified by match to protein family HMM PF00005 A0QT49 No unknown NC_008596.1 Mycobrowser_v3 CDS 1807122 1808108 . - 0 MSMEG_1712 MSMEG_1712 ABC transporter periplasmic-binding protein YtfQ identified by match to protein family HMM PF00532 A0QT50 No unknown NC_008596.1 Mycobrowser_v3 CDS 1852110 1852925 . - 0 MSMEG_1760 MSMEG_1760 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0QT95 No unknown NC_008596.1 Mycobrowser_v3 CDS 1808508 1810199 . + 0 MSMEG_1713 araB L-ribulokinase identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01234 A0QT51 No unknown NC_008596.1 Mycobrowser_v3 CDS 1810196 1810891 . + 0 MSMEG_1714 MSMEG_1714 L-ribulose-5-phosphate 4-epimerase UlaF identified by match to protein family HMM PF00596 A0QT52 No unknown NC_008596.1 Mycobrowser_v3 CDS 1810894 1812399 . + 0 MSMEG_1715 araA L-arabinose isomerase identified by match to protein family HMM PF02610 A0QT53 No unknown NC_008596.1 Mycobrowser_v3 CDS 1812681 1812956 . + 0 MSMEG_1716 MSMEG_1716 IS3 family protein element, transposase orfA identified by similarity to GP:15619022; match to protein family HMM PF01527 A0QT54 No unknown NC_008596.1 Mycobrowser_v3 CDS 1813566 1814966 . - 0 MSMEG_1717 MSMEG_1717 ISMsm8, transposase identified by similarity to SP:P37248; match to protein family HMM PF00665 A0QT55 No unknown NC_008596.1 Mycobrowser_v3 CDS 1815873 1816148 . + 0 MSMEG_1720 MSMEG_1720 IS1137, transposase orfA similar at the nucleotide level to IS1137 in the IS Finder database.; identified by match to protein family HMM PF01527 A0QT56 No unknown Rv3474 Rv3474 NC_008596.1 Mycobrowser_v3 CDS 1844642 1845010 . - 0 MSMEG_1755 MSMEG_1755 anti-sigm factor, ChrR A0QT89 No unknown NC_008596.1 Mycobrowser_v3 CDS 1906425 1906814 . + 0 MSMEG_1831 MSMEG_1831 Transcription factor WhiB identified by match to protein family HMM PF02467 A0QTG3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1816151 1817104 . + 0 MSMEG_1721 MSMEG_1721 IS1137, transposase orfB similar at the nucleotide level to IS1137 in the IS Finder database.; identified by match to protein family HMM PF00665 A0QQE3 No unknown Rv1764,Rv3187,Rv3475 Rv1764,Rv3187,Rv3475 NC_008596.1 Mycobrowser_v3 CDS 1817135 1817806 . - 0 MSMEG_1722 MSMEG_1722 hypothetical protein identified by Glimmer2; putative A0QT58 No unknown NC_008596.1 Mycobrowser_v3 CDS 1818047 1818370 . + 0 MSMEG_1723 MSMEG_1723 hypothetical protein identified by Glimmer2; putative A0QT59 No unknown NC_008596.1 Mycobrowser_v3 CDS 1818478 1818885 . - 0 MSMEG_1724 MSMEG_1724 conserved hypothetical protein A0QT60 No unknown NC_008596.1 Mycobrowser_v3 CDS 1819287 1819676 . + 0 MSMEG_1725 MSMEG_1725 putative transposase A0QT61 No unknown NC_008596.1 Mycobrowser_v3 CDS 1819676 1820689 . + 0 MSMEG_1726 MSMEG_1726 transposase identified by match to protein family HMM PF00665 A0QT62 No unknown NC_008596.1 Mycobrowser_v3 CDS 1821176 1821511 . + 0 MSMEG_1728 MSMEG_1728 ISMsm1, transposase orfA identified by similarity to GP:16551202; match to protein family HMM PF01527 A0QT63 No unknown NC_008596.1 Mycobrowser_v3 CDS 1821508 1822437 . + 0 MSMEG_1730 MSMEG_1730 ISMsm1, transposase orfB identified by similarity to GP:16551202; match to protein family HMM PF00665 A0QT64 No unknown NC_008596.1 Mycobrowser_v3 CDS 1823395 1824546 . + 0 MSMEG_1732 MSMEG_1732 Transposase IS116/IS110/IS902 family protein identified by match to protein family HMM PF01548; match to protein family HMM PF02371 A0QT65 No unknown NC_008596.1 Mycobrowser_v3 CDS 1866940 1867401 . - 0 MSMEG_1781 MSMEG_1781 hypothetical protein identified by Glimmer2; putative A0QTB5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1824488 1825807 . - 0 MSMEG_1731 MSMEG_1731 IS6120, transposase identified by similarity to SP:P35883; match to protein family HMM PF00872 A0QT66 No unknown NC_008596.1 Mycobrowser_v3 CDS 1826089 1826988 . + 0 MSMEG_1733 MSMEG_1733 conserved hypothetical protein A0QT67 No unknown NC_008596.1 Mycobrowser_v3 CDS 1827076 1827543 . - 0 MSMEG_1734 MSMEG_1734 conserved hypothetical protein A0QT68 No unknown Rv3304 Rv3304 NC_008596.1 Mycobrowser_v3 CDS 1827585 1829000 . + 0 MSMEG_1735 MSMEG_1735 dihydrolipoamide dehydrogenase identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992 A0QT69 No unknown Rv3303c Rv3303c NC_008596.1 Mycobrowser_v3 CDS 1857823 1858440 . + 0 MSMEG_1768 MSMEG_1768 conserved hypothetical protein A0QTA2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1829060 1830805 . + 0 MSMEG_1736 MSMEG_1736 glycerol-3-phosphate dehydrogenase 2 identified by match to protein family HMM PF01266 A0QT70 No unknown Rv3302c Rv3302c NC_008596.1 Mycobrowser_v3 CDS 1830802 1831677 . + 0 MSMEG_1737 MSMEG_1737 RNA pseudouridine synthase family protein identified by match to protein family HMM PF00849 A0QT71 No unknown Rv3300c Rv3300c NC_008596.1 Mycobrowser_v3 CDS 1831699 1832286 . - 0 MSMEG_1738 MSMEG_1738 probable conserved transmembrane protein A0QT72 No unknown Rv1733c Rv1733c NC_008596.1 Mycobrowser_v3 CDS 1832435 1833205 . + 0 MSMEG_1740 MSMEG_1740 dehydrogenase/reductase SDR family protein member 4 identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QT73 No unknown NC_008596.1 Mycobrowser_v3 CDS 1833174 1833962 . - 0 MSMEG_1739 MSMEG_1739 enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 A0QT74 No unknown NC_008596.1 Mycobrowser_v3 CDS 1833986 1834660 . - 0 MSMEG_1741 MSMEG_1741 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QT75 No unknown NC_008596.1 Mycobrowser_v3 CDS 1834732 1835823 . + 0 MSMEG_1742 MSMEG_1742 oxidoreductase identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0QT76 No unknown NC_008596.1 Mycobrowser_v3 CDS 1835832 1836980 . + 0 MSMEG_1743 MSMEG_1743 Fatty acid desaturase identified by match to protein family HMM PF00487 A0QT77 No unknown NC_008596.1 Mycobrowser_v3 CDS 1837050 1837967 . - 0 MSMEG_1744 MSMEG_1744 hypothetical protein identified by Glimmer2; putative A0QT78 No unknown NC_008596.1 Mycobrowser_v3 CDS 1838043 1838657 . - 0 MSMEG_1745 MSMEG_1745 transcriptional regulator identified by match to protein family HMM PF00440 A0QT79 No unknown NC_008596.1 Mycobrowser_v3 CDS 1880491 1880622 . + 0 MSMEG_1801 MSMEG_1801 hypothetical protein identified by Glimmer2; putative A0QTD5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1838767 1840137 . + 0 MSMEG_1746 MSMEG_1746 6-hydroxy-D-nicotine oxidase identified by match to protein family HMM PF01565 A0QT80 No unknown Rv1726 Rv1726 NC_008596.1 Mycobrowser_v3 CDS 1840251 1840865 . + 0 MSMEG_1747 MSMEG_1747 RNA polymerase sigma-70 factor identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QT81 No unknown NC_008596.1 Mycobrowser_v3 CDS 1840862 1841299 . + 0 MSMEG_1748 MSMEG_1748 conserved hypothetical protein identified by match to protein family HMM PF06172 A0QT82 No unknown NC_008596.1 Mycobrowser_v3 CDS 1841151 1841429 . + 0 MSMEG_1750 MSMEG_1750 hypothetical protein identified by Glimmer2; putative A0QT83 No unknown NC_008596.1 Mycobrowser_v3 CDS 1841333 1842214 . - 0 MSMEG_1749 MSMEG_1749 putative monooxygenase A0QT84 No unknown NC_008596.1 Mycobrowser_v3 CDS 1843365 1844117 . + 0 MSMEG_1753 mtnN MTA/SAH nucleosidase identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704 A0QT87 No unknown Rv0091 Rv0091 NC_008596.1 Mycobrowser_v3 CDS 1845058 1845816 . - 0 MSMEG_1756 MSMEG_1756 endonuclease VIII and dna n-glycosylase with an ap lyase activity identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831 A0QT90 No unknown Rv3297 Rv3297 NC_008596.1 Mycobrowser_v3 CDS 1845819 1850342 . - 0 MSMEG_1757 MSMEG_1757 DEAD/DEAH box helicase identified by match to protein family HMM PF00270; match to protein family HMM PF00271 A0QT91 No unknown Rv3296 Rv3296 NC_008596.1 Mycobrowser_v3 CDS 1850404 1850577 . - 0 MSMEG_1758 MSMEG_1758 hypothetical protein identified by Glimmer2; putative A0QT92 No unknown NC_008596.1 Mycobrowser_v3 CDS 1850576 1850854 . + 0 MSMEG_1759 MSMEG_1759 hypothetical protein identified by Glimmer2; putative A0QT93 No unknown NC_008596.1 Mycobrowser_v3 CDS 1850826 1852142 . + 0 MSMEG_1761 MSMEG_1761 integral membrane protein identified by match to protein family HMM PF06762 A0QT94 No unknown Rv0235c Rv0235c NC_008596.1 Mycobrowser_v3 CDS 5212470 5212793 . + 0 MSMEG_5112 MSMEG_5112 hypothetical protein identified by Glimmer2; putative A0R2H2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1852964 1854547 . - 0 MSMEG_1762 MSMEG_1762 piperideine-6-carboxylic acid dehydrogenase identified by match to protein family HMM PF00171 A0QT96 No unknown Rv3293 Rv3293 NC_008596.1 Mycobrowser_v3 CDS 1854610 1855083 . + 0 MSMEG_1763 MSMEG_1763 leucine-responsive regulatory protein identified by match to protein family HMM PF01037 A0QT97 No unknown Rv3291c Rv3291c NC_008596.1 Mycobrowser_v3 CDS 1855136 1856500 . + 0 MSMEG_1764 MSMEG_1764 L-lysine-epsilon aminotransferase identified by match to protein family HMM PF00202 A0QT98 No unknown Rv3290c Rv3290c NC_008596.1 Mycobrowser_v3 CDS 1856508 1857038 . - 0 MSMEG_1765 MSMEG_1765 restriction endonuclease family protein identified by match to protein family HMM PF04471 A0QT99 No unknown NC_008596.1 Mycobrowser_v3 CDS 1857176 1857421 . + 0 MSMEG_1766 MSMEG_1766 conserved hypothetical protein A0QTA0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1857437 1857826 . + 0 MSMEG_1767 MSMEG_1767 conserved hypothetical protein A0QTA1 No unknown Rv3289c Rv3289c NC_008596.1 Mycobrowser_v3 CDS 1858494 1858793 . + 0 MSMEG_1769 MSMEG_1769 UsfY protein A0QTA3 No unknown Rv3288c Rv3288c NC_008596.1 Mycobrowser_v3 CDS 1859306 1859974 . + 0 MSMEG_1771 MSMEG_1771 methylase, putative identified by match to protein family HMM PF01170; match to protein family HMM PF05175; match to protein family HMM TIGR00537 A0QTA5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1859971 1860186 . + 0 MSMEG_1772 MSMEG_1772 conserved hypothetical protein A0QTA6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1860268 1861290 . - 0 MSMEG_1773 MSMEG_1773 conserved hypothetical protein A0QTA7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1861547 1862041 . - 0 MSMEG_1774 MSMEG_1774 conserved hypothetical protein A0QTA8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1862204 1863577 . + 0 MSMEG_1775 MSMEG_1775 cytochrome P450 monooxygenase A0QTA9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1863597 1864526 . - 0 MSMEG_1776 MSMEG_1776 ribonuclease Z identified by match to protein family HMM PF00753 A0QTB0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1864669 1864974 . + 0 MSMEG_1777 MSMEG_1777 UsfY protein A0QTB1 No unknown Rv3288c Rv3288c NC_008596.1 Mycobrowser_v3 CDS 1864985 1865326 . - 0 MSMEG_1778 MSMEG_1778 conserved hypothetical protein A0QTB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1865313 1865714 . - 0 MSMEG_1779 MSMEG_1779 hypothetical protein identified by Glimmer2; putative A0QTB3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1865711 1866940 . - 0 MSMEG_1780 MSMEG_1780 hypothetical protein identified by Glimmer2; putative A0QTB4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1867419 1868306 . - 0 MSMEG_1782 MSMEG_1782 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0QTB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1868321 1868551 . - 0 MSMEG_1783 MSMEG_1783 hypothetical protein identified by Glimmer2; putative A0QTB7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1868617 1869747 . + 0 MSMEG_1785 MSMEG_1785 hypothetical protein identified by Glimmer2; putative A0QTB8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1868641 1869657 . - 0 MSMEG_1784 MSMEG_1784 type I topoisomerase A0QTB9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1869761 1870345 . + 0 MSMEG_1787 MSMEG_1787 RsbW protein A0QTC0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1870342 1870770 . - 0 MSMEG_1786 MSMEG_1786 stas domain, putative identified by match to protein family HMM PF01740 A0QTC1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1871258 1871512 . + 0 MSMEG_1788 MSMEG_1788 conserved hypothetical protein A0QTC2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1871713 1871970 . + 0 MSMEG_1790 MSMEG_1790 conserved hypothetical protein A0QTC4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1872145 1872453 . + 0 MSMEG_1791 MSMEG_1791 UsfY protein A0QTC5 No unknown Rv3288c Rv3288c NC_008596.1 Mycobrowser_v3 CDS 1872508 1872858 . - 0 MSMEG_1792 MSMEG_1792 conserved hypothetical protein A0QTC6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1872888 1873895 . + 0 MSMEG_1794 MSMEG_1794 dehydrogenase identified by match to protein family HMM PF00296 A0QTC7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1874566 1875648 . - 0 MSMEG_1795 MSMEG_1795 2-deoxy-scyllo-inosamine dehydrogenase identified by match to protein family HMM PF00107 A0QTC9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1875645 1877078 . - 0 MSMEG_1796 MSMEG_1796 membrane protein identified by match to protein family HMM PF01266 A0QTD0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1877075 1877791 . - 0 MSMEG_1797 MSMEG_1797 salicylate esterase identified by match to protein family HMM PF00561 A0QTD1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1877776 1879104 . - 0 MSMEG_1798 MSMEG_1798 major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QTD2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1879301 1880209 . + 0 MSMEG_1799 MSMEG_1799 transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QTD3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1880234 1880365 . - 0 MSMEG_1800 MSMEG_1800 hypothetical protein identified by Glimmer2; putative A0QTD4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1881660 1882412 . + 0 MSMEG_1804 MSMEG_1804 RNA polymerase sigma-F factor identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02980 A0QTD8 No unknown Rv3286c Rv3286c NC_008596.1 Mycobrowser_v3 CDS 1882438 1882986 . + 0 MSMEG_1806 MSMEG_1806 conserved hypothetical protein A0QTD9 No unknown Rv0345 Rv0345 NC_008596.1 Mycobrowser_v3 CDS 1882976 1883332 . - 0 MSMEG_1805 MSMEG_1805 conserved hypothetical protein A0QTE0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1883433 1885229 . - 0 MSMEG_1807 MSMEG_1807 acetyl-/propionyl-coenzyme A carboxylase alpha chain identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786 A0QTE1 No unknown Rv3285 Rv3285 NC_008596.1 Mycobrowser_v3 CDS 1885624 1886034 . - 0 MSMEG_1808 MSMEG_1808 Fe-S metabolism associated SufE identified by match to protein family HMM PF02657 A0QTE2 No unknown Rv3284 Rv3284 NC_008596.1 Mycobrowser_v3 CDS 1886037 1886924 . - 0 MSMEG_1809 MSMEG_1809 putative thiosulfate sulfurtransferase identified by match to protein family HMM PF00581 A0QTE3 No unknown Rv3283 Rv3283 NC_008596.1 Mycobrowser_v3 CDS 1887074 1887283 . - 0 MSMEG_1810 MSMEG_1810 hypothetical protein identified by Glimmer2; putative A0QTE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1887457 1888092 . - 0 MSMEG_1811 maf septum formation protein Maf identified by match to protein family HMM PF02545; match to protein family HMM TIGR00172 A0QTE5 No unknown Rv3282 Rv3282 NC_008596.1 Mycobrowser_v3 CDS 1905150 1906133 . - 0 MSMEG_1830 cofD lppg:fo 2-phospho-l-lactate transferase identified by match to protein family HMM PF01933; match to protein family HMM TIGR01819 A0QTG2 No unknown Rv3261 Rv3261 NC_008596.1 Mycobrowser_v3 CDS 1888497 1890125 . - 0 MSMEG_1813 MSMEG_1813 propionyl-CoA carboxylase beta chain identified by match to protein family HMM PF01039 A0QTE7 No unknown Rv3280 Rv3280 NC_008596.1 Mycobrowser_v3 CDS 1893207 1893878 . - 0 MSMEG_1817 MSMEG_1817 probable conserved transmembrane protein identified by match to protein family HMM PF04138 A0QTF1 No unknown Rv3277 Rv3277 NC_008596.1 Mycobrowser_v3 CDS 1893955 1895181 . + 0 MSMEG_1819 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit identified by match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM TIGR01161 A0QTF2 No unknown Rv3276c Rv3276c NC_008596.1 Mycobrowser_v3 CDS 1895208 1895687 . + 0 MSMEG_1820 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162 A0QTF3 No unknown Rv3275c Rv3275c NC_008596.1 Mycobrowser_v3 CDS 2519767 2520237 . + 0 MSMEG_2435 MSMEG_2435 30S ribosomal protein S16 identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002 A0QV37 No unknown Rv2909c Rv2909c NC_008596.1 Mycobrowser_v3 CDS 1896033 1897202 . + 0 MSMEG_1821 MSMEG_1821 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QTF4 No unknown Rv3274c Rv3274c NC_008596.1 Mycobrowser_v3 CDS 1897225 1898037 . + 0 MSMEG_1822 MSMEG_1822 biotin-[acetyl-CoA-carboxylase] ligase identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM TIGR00121 A0QTF5 No unknown Rv3279c Rv3279c NC_008596.1 Mycobrowser_v3 CDS 1898113 1898817 . - 0 MSMEG_1823 MSMEG_1823 conserved hypothetical protein identified by match to protein family HMM TIGR03089 A0QTF6 No unknown Rv3268 Rv3268 NC_008596.1 Mycobrowser_v3 CDS 1898840 1900321 . - 0 MSMEG_1824 MSMEG_1824 transcriptional regulator, LytR family protein identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350 A0QTF7 No unknown Rv3267 Rv3267 NC_008596.1 Mycobrowser_v3 CDS 1900308 1901291 . + 0 MSMEG_1825 rfbD dTDP-4-dehydrorhamnose reductase identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01214 A0QTF8 No unknown Rv3266c Rv3266c NC_008596.1 Mycobrowser_v3 CDS 1901315 1902184 . + 0 MSMEG_1826 MSMEG_1826 dTDP-RhA:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase identified by match to protein family HMM PF00535 A0QTF9 No unknown Rv3265c Rv3265c NC_008596.1 Mycobrowser_v3 CDS 1940145 1940354 . - 0 MSMEG_1864 MSMEG_1864 transposase A0QTJ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1903789 1905153 . - 0 MSMEG_1829 MSMEG_1829 F420-0:gamma-glutamyl ligase identified by match to protein family HMM PF00881; match to protein family HMM PF01996; match to protein family HMM TIGR01916 A0QTG1 No unknown Rv3262 Rv3262 NC_008596.1 Mycobrowser_v3 CDS 1907957 1909375 . + 0 MSMEG_1834 MSMEG_1834 phosphomannomutase/phosphoglucomutase identified by similarity to SP:P29955; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880 A0QTG6 No unknown Rv3257c Rv3257c NC_008596.1 Mycobrowser_v3 CDS 1909372 1910454 . + 0 MSMEG_1835 MSMEG_1835 TobH protein A0QTG7 No unknown Rv3256c Rv3256c NC_008596.1 Mycobrowser_v3 CDS 1910546 1911685 . + 0 MSMEG_1836 manA mannose-6-phosphate isomerase, class I identified by match to protein family HMM PF01238; match to protein family HMM TIGR00218 A0QTG8 No unknown Rv3255c Rv3255c NC_008596.1 Mycobrowser_v3 CDS 1911718 1913127 . - 0 MSMEG_1837 MSMEG_1837 secreted protein A0QTG9 No unknown Rv3254 Rv3254 NC_008596.1 Mycobrowser_v3 CDS 1913166 1914650 . + 0 MSMEG_1838 MSMEG_1838 cationic amino acid transporter identified by match to protein family HMM PF00324 A0QTH0 No unknown Rv3253c Rv3253c NC_008596.1 Mycobrowser_v3 CDS 1914807 1916039 . + 0 MSMEG_1839 MSMEG_1839 alkane 1-monooxygenase identified by match to protein family HMM PF00487 A0QTH1 No unknown Rv3252c Rv3252c NC_008596.1 Mycobrowser_v3 CDS 1916036 1916209 . + 0 MSMEG_1840 MSMEG_1840 rubredoxin identified by match to protein family HMM PF00301 A0QTH2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1916206 1916388 . + 0 MSMEG_1841 MSMEG_1841 rubredoxin identified by match to protein family HMM PF00301 A0QTH3 No unknown Rv3250c Rv3250c NC_008596.1 Mycobrowser_v3 CDS 1916396 1917121 . + 0 MSMEG_1842 MSMEG_1842 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QTH4,A4ZHR8 No unknown Rv3249c Rv3249c NC_008596.1 Mycobrowser_v3 CDS 1918791 1919315 . - 0 MSMEG_1844 MSMEG_1844 conserved hypothetical protein A0QTH5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1919373 1919999 . - 0 MSMEG_1845 MSMEG_1845 YghA protein identified by match to protein family HMM PF03458 A0QTH6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1920009 1921031 . - 0 MSMEG_1846 MSMEG_1846 polysulphide reductase, NrfD identified by match to protein family HMM PF03916 A0QTH7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1921055 1921969 . - 0 MSMEG_1847 MSMEG_1847 4Fe-4S ferredoxin, iron-sulfur binding protein identified by match to protein family HMM PF00037 A0QTH8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1925424 1927136 . - 0 MSMEG_1849 selB selenocysteine-specific translation elongation factor identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00475 A0QTH9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1927124 1928404 . - 0 MSMEG_1850 selA L-seryl-tRNA selenium transferase identified by match to protein family HMM PF03841; match to protein family HMM TIGR00474 A0QTI0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1928562 1929554 . + 0 MSMEG_1852 selD selenide, water dikinase identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00476 A0QTI1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2520258 2520488 . + 0 MSMEG_2436 MSMEG_2436 conserved hypothetical protein A0QV38 No unknown Rv2908c Rv2908c NC_008596.1 Mycobrowser_v3 CDS 1931586 1932791 . + 0 MSMEG_1854 MSMEG_1854 valosin containing protein-1 identified by match to protein family HMM PF00004 A0QTI2,A4ZHR9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1932788 1933810 . + 0 MSMEG_1855 MSMEG_1855 tetratricopeptide repeat protein, putative identified by match to protein family HMM PF00515; match to protein family HMM PF07719 A0QTI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1933836 1934534 . - 0 MSMEG_1856 MSMEG_1856 hypothetical protein identified by Glimmer2; putative A0QTI4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1934812 1936173 . + 0 MSMEG_1857 MSMEG_1857 transposase IstA protein, putative identified by match to protein family HMM PF00665 A0QTI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1936170 1937024 . + 0 MSMEG_1858 MSMEG_1858 putative transposition helper protein identified by match to protein family HMM PF01695 A0QTI6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1937032 1937322 . - 0 MSMEG_1859 MSMEG_1859 hypothetical protein identified by Glimmer2; putative A0QTI7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1937342 1937530 . - 0 MSMEG_1860 MSMEG_1860 hypothetical protein identified by Glimmer2; putative A0QTI8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1937660 1938472 . - 0 MSMEG_1861 MSMEG_1861 hypothetical protein identified by Glimmer2; putative A0QTI9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1938555 1939568 . - 0 MSMEG_1862 MSMEG_1862 transposase identified by match to protein family HMM PF00665 A0QTJ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1940497 1941963 . + 0 MSMEG_1865 MSMEG_1865 IS1549, transposase identified by similarity to GP:2935133; match to protein family HMM PF01609 A0QNK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1942190 1943023 . - 0 MSMEG_1866 MSMEG_1866 transposase B identified by match to protein family HMM PF00665 A0QTJ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1943053 1943334 . - 0 MSMEG_1867 MSMEG_1867 transposase identified by match to protein family HMM PF01527 A0QTJ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1943545 1943838 . - 0 MSMEG_1868 MSMEG_1868 hypothetical protein identified by Glimmer2; putative A0QTJ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2962927 2963490 . + 0 MSMEG_2901 MSMEG_2901 conserved hypothetical protein A0QWD2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1943875 1944624 . - 0 MSMEG_1869 MSMEG_1869 hypothetical protein identified by Glimmer2; putative A0QTJ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1960095 1961504 . + 0 MSMEG_1882 MSMEG_1882 acyltransferase, ws/dgat/mgat subfamily protein identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946 A0QTL0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1944699 1948496 . - 0 MSMEG_1870 MSMEG_1870 conserved hypothetical protein A0QTJ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1948496 1948774 . - 0 MSMEG_1871 MSMEG_1871 conserved hypothetical protein A0QTJ9 No unknown Rv3904c Rv3904c NC_008596.1 Mycobrowser_v3 CDS 1948794 1949663 . - 0 MSMEG_1872 MSMEG_1872 conserved hypothetical protein identified by match to protein family HMM PF06013 A0QTK0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1949753 1950385 . + 0 MSMEG_1873 MSMEG_1873 thymidylate kinase identified by match to protein family HMM PF02223 A0QTK1 No unknown Rv3247c Rv3247c NC_008596.1 Mycobrowser_v3 CDS 1950437 1951123 . + 0 MSMEG_1874 mtrA DNA-binding response regulator MtrA identified by similarity to SP:Q50447; match to protein family HMM PF00072; match to protein family HMM PF00486 A0QTK2 No unknown Rv3246c Rv3246c NC_008596.1 Mycobrowser_v3 CDS 1951266 1952852 . + 0 MSMEG_1875 MSMEG_1875 sensor histidine kinase MtrB identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 A0QTK3,A4ZHS0 No unknown Rv3245c Rv3245c NC_008596.1 Mycobrowser_v3 CDS 1952849 1954606 . + 0 MSMEG_1876 MSMEG_1876 LpqB protein A0QTK4 No unknown Rv3244c Rv3244c NC_008596.1 Mycobrowser_v3 CDS 1954646 1955299 . + 0 MSMEG_1877 MSMEG_1877 conserved hypothetical protein A0QTK5 No unknown Rv3242c Rv3242c NC_008596.1 Mycobrowser_v3 CDS 1955596 1956288 . + 0 MSMEG_1878 MSMEG_1878 S30AE family protein identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741 A0QTK6 No unknown Rv3241c Rv3241c NC_008596.1 Mycobrowser_v3 CDS 1956363 1956488 . - 0 MSMEG_1879 MSMEG_1879 hypothetical protein identified by Glimmer2; putative A0QTK7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2011850 2012509 . - 0 MSMEG_1935 MSMEG_1935 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QTR3 No unknown Rv3208 Rv3208 NC_008596.1 Mycobrowser_v3 CDS 1971300 1972799 . + 0 MSMEG_1892 MSMEG_1892 transferase identified by match to protein family HMM PF05175 A0QTM0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2523015 2523356 . + 0 MSMEG_2440 rplS ribosomal protein L19 identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024 A0QV42 No unknown Rv2904c Rv2904c NC_008596.1 Mycobrowser_v3 CDS 1956525 1959386 . + 0 MSMEG_1881 secA preprotein translocase, SecA subunit identified by match to protein family HMM PF01043; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963 P71533 No unknown Rv3240c Rv3240c NC_008596.1 Mycobrowser_v3 CDS 1959383 1959925 . - 0 MSMEG_1880 MSMEG_1880 hypothetical alanine arginine proline rich protein A0QTK9 No unknown Rv3235 Rv3235 NC_008596.1 Mycobrowser_v3 CDS 2033567 2034406 . - 0 MSMEG_1955 MSMEG_1955 conserved hypothetical protein A0QTT4 No unknown Rv3196 Rv3196 NC_008596.1 Mycobrowser_v3 CDS 1961567 1963423 . + 0 MSMEG_1883 MSMEG_1883 glycine betaine transporter OpuD identified by match to protein family HMM PF02028; match to protein family HMM TIGR00842 A0QTL1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1963433 1963930 . + 0 MSMEG_1884 MSMEG_1884 conserved hypothetical protein A0QTL2 No unknown Rv3231c Rv3231c NC_008596.1 Mycobrowser_v3 CDS 1963982 1965133 . + 0 MSMEG_1885 MSMEG_1885 2Fe-2S iron-sulfur cluster binding domain protein identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0QTL3 No unknown Rv3230c Rv3230c NC_008596.1 Mycobrowser_v3 CDS 1965203 1966459 . + 0 MSMEG_1886 MSMEG_1886 Fatty acid desaturase identified by match to protein family HMM PF00487 A0QTL4 No unknown Rv3229c Rv3229c NC_008596.1 Mycobrowser_v3 CDS 1966654 1967082 . + 0 MSMEG_1887 MSMEG_1887 hypothetical protein identified by Glimmer2; putative A0QTL5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1967099 1968031 . - 0 MSMEG_1888 MSMEG_1888 methyltransferase identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 A0QTL6 No unknown Rv3787c Rv3787c NC_008596.1 Mycobrowser_v3 CDS 1968124 1969131 . - 0 MSMEG_1889 MSMEG_1889 putative ribosome small subunit-dependent GTPase RsgA identified by match to protein family HMM PF03193 A0QTL7 No unknown Rv3228 Rv3228 NC_008596.1 Mycobrowser_v3 CDS 1982232 1983185 . - 0 MSMEG_1902 MSMEG_1902 transcriptional regulator identified by match to protein family HMM PF00126 A0QTN0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1969128 1970459 . - 0 MSMEG_1890 aroA 3-phosphoshikimate 1-carboxyvinyltransferase identified by match to protein family HMM PF00275; match to protein family HMM TIGR01356 A0QTL8 No unknown Rv3227 Rv3227 NC_008596.1 Mycobrowser_v3 CDS 1995965 1996249 . + 0 MSMEG_1912 MSMEG_1912 muconolactone delta-isomerase 1 identified by match to protein family HMM PF02426 A0QTP0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1970515 1971303 . + 0 MSMEG_1891 MSMEG_1891 conserved hypothetical protein identified by match to protein family HMM PF02586 A0QTL9 No unknown Rv3226c Rv3226c NC_008596.1 Mycobrowser_v3 CDS 1997670 1997975 . + 0 MSMEG_1915 MSMEG_1915 anti-sigma factor, family protein identified by match to protein family HMM TIGR02949 A0QTP3 No unknown Rv3221A Rv3221A NC_008596.1 Mycobrowser_v3 CDS 1972807 1973613 . - 0 MSMEG_1893 MSMEG_1893 UbiE/COQ5 methyltransferase A0QTM1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1973653 1974519 . - 0 MSMEG_1894 MSMEG_1894 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QTM2 No unknown Rv3224 Rv3224 NC_008596.1 Mycobrowser_v3 CDS 1974521 1975435 . - 0 MSMEG_1895 MSMEG_1895 HTH-type transcriptional regulator AlsR identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QTM3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2066756 2067646 . - 0 MSMEG_1984 MSMEG_1984 haloacetate dehalogenase H-1 identified by match to protein family HMM PF00561 A0QTW0 No unknown NC_008596.1 Mycobrowser_v3 CDS 1975509 1976741 . + 0 MSMEG_1896 MSMEG_1896 beta-ketothiolase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0QTM4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1976738 1977514 . + 0 MSMEG_1897 pcaD 3-oxoadipate enol-lactonase identified by match to protein family HMM PF00561; match to protein family HMM TIGR02427 A0QTM5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1977511 1978308 . + 0 MSMEG_1898 MSMEG_1898 succinyl-CoA:3-ketoacid-coenzyme A transferase 1, precursor identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429 A0QTM6 No unknown Rv2504c Rv2504c NC_008596.1 Mycobrowser_v3 CDS 1978305 1978955 . + 0 MSMEG_1899 MSMEG_1899 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428 A0QTM7 No unknown Rv2503c Rv2503c NC_008596.1 Mycobrowser_v3 CDS 1978960 1979517 . - 0 MSMEG_1900 MSMEG_1900 D-alanyl-D-alanine carboxypeptidase family protein identified by match to protein family HMM PF02557 A0QTM8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1979558 1982224 . - 0 MSMEG_1901 MSMEG_1901 DNA-binding HTH domain containing protein, putative identified by match to protein family HMM PF00196; match to protein family HMM PF07721 A0QTM9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1983261 1985660 . - 0 MSMEG_1903 MSMEG_1903 caib/baif family protein identified by match to protein family HMM PF02515 A0QTN1 No unknown Rv1866 Rv1866 NC_008596.1 Mycobrowser_v3 CDS 1997988 1998062 . - 0 MSMEG_1916 MSMEG_1916 hypothetical protein identified by Glimmer2; putative A0QTP4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1985666 1986859 . - 0 MSMEG_1904 MSMEG_1904 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0QTN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1986861 1987976 . - 0 MSMEG_1905 MSMEG_1905 acyl-CoA dehydrogenase protein identified by match to protein family HMM PF00441; match to protein family HMM PF02771 A0QTN3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2000646 2001608 . - 0 MSMEG_1920 MSMEG_1920 diacylglycerol kinase, catalytic region identified by match to protein family HMM PF00781 A0QTP8 No unknown Rv3218 Rv3218 NC_008596.1 Mycobrowser_v3 CDS 2001654 2002043 . - 0 MSMEG_1921 MSMEG_1921 SEC-C motif domain protein identified by match to protein family HMM PF02810 A0QTP9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2081621 2082070 . - 0 MSMEG_2000 MSMEG_2000 conserved hypothetical protein A0QTX6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1988141 1990903 . - 0 MSMEG_1906 MSMEG_1906 toluate 1,2-dioxygenase electron transfer component identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021 A0QTN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1990913 1991428 . - 0 MSMEG_1907 MSMEG_1907 toluate 1,2-dioxygenase beta subunit identified by match to protein family HMM PF00866 A0QTN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1991430 1992794 . - 0 MSMEG_1908 MSMEG_1908 benzoate 1,2-dioxygenase alpha subunit identified by match to protein family HMM PF00355; match to protein family HMM PF00848 A0QTN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1993004 1993930 . + 0 MSMEG_1909 MSMEG_1909 putative HTH-type transcriptional regulator YnfL identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QTN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1993927 1995030 . + 0 MSMEG_1910 MSMEG_1910 muconate cycloisomerase identified by match to protein family HMM PF01188; match to protein family HMM PF02746 A0QTN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2145479 2145835 . - 0 MSMEG_2068 MSMEG_2068 hypothetical protein identified by Glimmer2; putative A0QU41 No unknown NC_008596.1 Mycobrowser_v3 CDS 1995064 1995957 . + 0 MSMEG_1911 catA catechol 1,2-dioxygenase identified by match to protein family HMM PF00775; match to protein family HMM PF04444; match to protein family HMM TIGR02438 A0QTN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1996254 1996745 . - 0 MSMEG_1913 ybaK YbaK/ebsC protein identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011 A0QTP1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1997014 1997673 . + 0 MSMEG_1914 MSMEG_1914 RNA polymerase sigma-70 factor, family protein identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02947 A0QTP2 No unknown Rv3223c Rv3223c NC_008596.1 Mycobrowser_v3 CDS 1998476 1999975 . + 0 MSMEG_1918 MSMEG_1918 sensor histidine kinase identified by match to protein family HMM PF02518; match to protein family HMM PF07568 A0QTP6 No unknown Rv3220c Rv3220c NC_008596.1 Mycobrowser_v3 CDS 2000143 2000397 . - 0 MSMEG_1919 MSMEG_1919 Transcription factor WhiB identified by match to protein family HMM PF02467 A0QTP7 No unknown Rv3219 Rv3219 NC_008596.1 Mycobrowser_v3 CDS 2002144 2002581 . + 0 MSMEG_1922 aroQ 3-dehydroquinate dehydratase, type II identified by match to protein family HMM PF01220; match to protein family HMM TIGR01088 A0QTQ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2003441 2004532 . - 0 MSMEG_1925 MSMEG_1925 isochorismate synthase DhbC identified by match to protein family HMM PF00425; match to protein family HMM TIGR00543 A0QTQ3 No unknown Rv3215 Rv3215 NC_008596.1 Mycobrowser_v3 CDS 2004529 2005140 . - 0 MSMEG_1926 MSMEG_1926 phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 A0QTQ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2005199 2005996 . + 0 MSMEG_1927 MSMEG_1927 cobyrinic Acid a,c-diamide synthase identified by match to protein family HMM PF01656 A0QTQ5 No unknown Rv3213c Rv3213c NC_008596.1 Mycobrowser_v3 CDS 2006011 2006712 . + 0 MSMEG_1928 MSMEG_1928 regulatory protein identified by match to protein family HMM PF00481 A0QTQ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2006724 2007941 . - 0 MSMEG_1929 MSMEG_1929 conserved hypothetical protein A0QTQ7 No unknown Rv3212 Rv3212 NC_008596.1 Mycobrowser_v3 CDS 2007957 2009465 . - 0 MSMEG_1930 MSMEG_1930 DEAD/DEAH box helicase identified by match to protein family HMM PF00270; match to protein family HMM PF00271 A0QTQ8 No unknown Rv3211 Rv3211 NC_008596.1 Mycobrowser_v3 CDS 2009771 2010469 . + 0 MSMEG_1931 MSMEG_1931 conserved hypothetical protein A0QTQ9 No unknown Rv3210c Rv3210c NC_008596.1 Mycobrowser_v3 CDS 2010381 2010563 . + 0 MSMEG_1933 MSMEG_1933 hypothetical protein identified by Glimmer2; putative A0QTR0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2010476 2011300 . - 0 MSMEG_1932 MSMEG_1932 MmpS3 protein A0QTR1 No unknown Rv3209 Rv3209 NC_008596.1 Mycobrowser_v3 CDS 2011602 2011841 . + 0 MSMEG_1934 MSMEG_1934 ATP-binding protein A0QTR2 No unknown Rv3208A Rv3208A NC_008596.1 Mycobrowser_v3 CDS 2012755 2013789 . + 0 MSMEG_1936 MSMEG_1936 conserved hypothetical protein A0QTR4 No unknown Rv3207c Rv3207c NC_008596.1 Mycobrowser_v3 CDS 2013931 2015121 . + 0 MSMEG_1937 MSMEG_1937 molybdopterin biosynthesis protein MoeB identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237 A0QTR5 No unknown Rv3206c Rv3206c NC_008596.1 Mycobrowser_v3 CDS 3680523 3680780 . + 0 MSMEG_3617 MSMEG_3617 hypothetical protein identified by Glimmer2; putative A0QYD2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2015158 2016012 . + 0 MSMEG_1938 MSMEG_1938 conserved hypothetical protein identified by match to protein family HMM TIGR02569 A0QTR6 No unknown Rv3205c Rv3205c NC_008596.1 Mycobrowser_v3 CDS 2016090 2016386 . - 0 MSMEG_1939 MSMEG_1939 6-O-methylguanine DNA methyltransferase, DNA binding domain subfamily protein identified by match to protein family HMM PF01035 A0QTR7 No unknown Rv3204 Rv3204 NC_008596.1 Mycobrowser_v3 CDS 2016388 2017149 . - 0 MSMEG_1940 MSMEG_1940 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0QTR8 No unknown Rv3203 Rv3203 NC_008596.1 Mycobrowser_v3 CDS 2017285 2020422 . + 0 MSMEG_1941 MSMEG_1941 helicase, UvrD/Rep family protein identified by match to protein family HMM PF00580 A0QTR9 No unknown Rv3202c Rv3202c NC_008596.1 Mycobrowser_v3 CDS 2020443 2023706 . + 0 MSMEG_1943 MSMEG_1943 ATP-dependent DNA helicase identified by match to protein family HMM PF00580 A0QTS0 No unknown Rv3201c Rv3201c NC_008596.1 Mycobrowser_v3 CDS 2023699 2024412 . - 0 MSMEG_1942 MSMEG_1942 integral membrane protein identified by match to protein family HMM PF01988 A0QTS1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2024543 2024932 . - 0 MSMEG_1944 MSMEG_1944 membrane protein A0QTS2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2025002 2026096 . + 0 MSMEG_1945 MSMEG_1945 ion channel membrane protein identified by match to protein family HMM PF02254; match to protein family HMM PF07885 A0QTS3 No unknown Rv3200c Rv3200c NC_008596.1 Mycobrowser_v3 CDS 2026093 2027028 . + 0 MSMEG_1946 MSMEG_1946 NADH pyrophosphatase identified by match to protein family HMM PF00293 A0QTS4 No unknown Rv3199c Rv3199c NC_008596.1 Mycobrowser_v3 CDS 2027051 2027299 . - 0 MSMEG_1947 MSMEG_1947 conserved hypothetical protein identified by match to protein family HMM PF00462; match to protein family HMM TIGR02200 A0QTS5 No unknown Rv3198A Rv3198A NC_008596.1 Mycobrowser_v3 CDS 2027837 2028406 . + 0 MSMEG_1950 MSMEG_1950 conserved hypothetical protein identified by match to protein family HMM PF05532 A0QTS8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2028409 2029071 . + 0 MSMEG_1951 MSMEG_1951 conserved domain protein A0QTS9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2029125 2031275 . + 0 MSMEG_1952 MSMEG_1952 ATP-dependent DNA helicase identified by match to protein family HMM PF00570; match to protein family HMM PF00580 A0QTT0 No unknown Rv3198c Rv3198c NC_008596.1 Mycobrowser_v3 CDS 2032190 2033509 . - 0 MSMEG_1954 MSMEG_1954 ABC1 family protein identified by match to protein family HMM PF03109 A0QTT2 No unknown Rv3197 Rv3197 NC_008596.1 Mycobrowser_v3 CDS 2034464 2035873 . - 0 MSMEG_1957 MSMEG_1957 conserved hypothetical protein A0QTT5 No unknown Rv3195 Rv3195 NC_008596.1 Mycobrowser_v3 CDS 2035981 2037018 . + 0 MSMEG_1958 MSMEG_1958 PDZ domain family protein A0QTT6 No unknown Rv3194c Rv3194c NC_008596.1 Mycobrowser_v3 CDS 2037115 2040126 . + 0 MSMEG_1959 MSMEG_1959 putative membrane protein identified by match to protein family HMM PF03699 A0QTT7 No unknown Rv3193c Rv3193c NC_008596.1 Mycobrowser_v3 CDS 2040307 2040828 . + 0 MSMEG_1960 MSMEG_1960 hypothetical protein identified by Glimmer2; putative A0QTT8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2040821 2041996 . + 0 MSMEG_1961 MSMEG_1961 conserved hypothetical protein A0QTT9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2041993 2042538 . + 0 MSMEG_1962 MSMEG_1962 hypothetical protein identified by Glimmer2; putative A0QTU0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2042589 2045987 . + 0 MSMEG_1963 MSMEG_1963 putative transcriptional regulatory protein identified by match to protein family HMM PF00486; match to protein family HMM PF03704 A0QTU1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6147363 6148374 . - 0 MSMEG_6084 MSMEG_6084 AraC-family transcriptional regulator; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00165 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2046110 2047510 . + 0 MSMEG_1964 MSMEG_1964 mitomycin radical oxidase identified by match to protein family HMM PF01565 A0QTU2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2048141 2048551 . - 0 MSMEG_1966 MSMEG_1966 hypothetical protein identified by Glimmer2; putative A0QTU3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2048646 2049275 . + 0 MSMEG_1967 MSMEG_1967 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QTU4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2049610 2050320 . - 0 MSMEG_1968 MSMEG_1968 putative oxidoreductase identified by match to protein family HMM PF00106 A0QTU5 No unknown Rv3174 Rv3174 NC_008596.1 Mycobrowser_v3 CDS 2082169 2082831 . - 0 MSMEG_2001 MSMEG_2001 sugar transporter identified by match to protein family HMM PF00083 A0QTX7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2050786 2052537 . - 0 MSMEG_1970 MSMEG_1970 sigma factor identified by match to protein family HMM PF01590; match to protein family HMM PF02954 A0QTU7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2052753 2054381 . + 0 MSMEG_1971 MSMEG_1971 propane monooxygenase hydroxylase large subunit identified by match to protein family HMM PF02332 A0QTU8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2054473 2055519 . + 0 MSMEG_1972 MSMEG_1972 methane monooxygenase component C identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0QTU9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2056647 2056991 . + 0 MSMEG_1974 MSMEG_1974 propane monooxygenase coupling protein A0QTV0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2057028 2058071 . + 0 MSMEG_1975 MSMEG_1975 amidohydrolase 2 identified by match to protein family HMM PF04909 A0QTV1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2058068 2058811 . + 0 MSMEG_1976 MSMEG_1976 conserved hypothetical protein identified by match to protein family HMM PF01883 A0QTV2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2058811 2059836 . + 0 MSMEG_1977 MSMEG_1977 alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QTV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2059864 2061513 . + 0 MSMEG_1978 groL chaperonin GroL identified by match to protein family HMM PF00118; match to protein family HMM TIGR02348 A0QTV4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2061539 2061880 . + 0 MSMEG_1979 MSMEG_1979 antibiotic biosynthesis monooxygenase identified by match to protein family HMM PF03992 A0QTV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2061887 2063062 . - 0 MSMEG_1980 MSMEG_1980 monooxygenase identified by match to protein family HMM PF01494 A0QTV6 No unknown Rv0575c Rv0575c NC_008596.1 Mycobrowser_v3 CDS 2063059 2063547 . - 0 MSMEG_1981 MSMEG_1981 conserved hypothetical protein identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0QTV7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2063768 2065315 . + 0 MSMEG_1982 MSMEG_1982 acyl-CoA synthase identified by match to protein family HMM PF00501 A0QTV8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2080271 2081164 . + 0 MSMEG_1998 MSMEG_1998 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0QTX4 No unknown Rv1124 Rv1124 NC_008596.1 Mycobrowser_v3 CDS 2065325 2066677 . - 0 MSMEG_1983 MSMEG_1983 major facilitator family protein transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QTV9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1921966 1925233 . - 0 MSMEG_1848 MSMEG_1848 formate dehydrogenase-O, major subunit; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00384; match to protein family HMM PF04879 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2067763 2068695 . + 0 MSMEG_1985 MSMEG_1985 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QTW1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2068955 2070055 . + 0 MSMEG_1986 MSMEG_1986 tartrate dehydrogenase identified by similarity to SP:Q51945; match to protein family HMM PF00180; match to protein family HMM TIGR02089 A0QTW2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2070195 2070575 . + 0 MSMEG_1987 MSMEG_1987 conserved hypothetical protein A0QTW3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2070610 2071146 . + 0 MSMEG_1988 MSMEG_1988 conserved hypothetical protein A0QTW4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2071147 2072145 . + 0 MSMEG_1989 MSMEG_1989 phenoxybenzoate dioxygenase beta subunit identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0QTW5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2072174 2073247 . + 0 MSMEG_1990 MSMEG_1990 conserved hypothetical protein A0QTW6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2073322 2074476 . + 0 MSMEG_1991 MSMEG_1991 isovaleryl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QTW7 No unknown Rv0215c Rv0215c NC_008596.1 Mycobrowser_v3 CDS 2074476 2075642 . + 0 MSMEG_1992 MSMEG_1992 L-carnitine dehydratase/bile acid-inducible protein F identified by match to protein family HMM PF02515 A0QTW8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2075672 2076505 . + 0 MSMEG_1993 MSMEG_1993 MaoC like domain protein identified by match to protein family HMM PF01575 A0QTW9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2076502 2076633 . + 0 MSMEG_1994 MSMEG_1994 HpcH/HpaI aldolase A0QTX0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2076671 2077354 . - 0 MSMEG_1995 MSMEG_1995 transcriptional regulator MdcY family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QTX1 No unknown Rv0165c Rv0165c NC_008596.1 Mycobrowser_v3 CDS 2077513 2078376 . + 0 MSMEG_1996 MSMEG_1996 N5,N10- methylenetetrahydromethanopterin reductase-related protein identified by match to protein family HMM PF00296 A0QTX2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2078514 2080274 . + 0 MSMEG_1997 MSMEG_1997 N-acyl-D-glutamate amidohydrolase A0QTX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2082987 2083688 . + 0 MSMEG_2002 MSMEG_2002 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2083696 2085018 . - 0 MSMEG_2003 MSMEG_2003 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2085076 2085840 . - 0 MSMEG_2004 MSMEG_2004 arabinose-proton symporter A0QTY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2085866 2086792 . - 0 MSMEG_2005 MSMEG_2005 sugar phosphate isomerase/epimerase identified by match to protein family HMM PF01261 A0QTY1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2086952 2087875 . - 0 MSMEG_2006 MSMEG_2006 2,3-dihydroxybiphenyl 1,2-dioxygenase identified by match to protein family HMM PF00903 A0QTY2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2087878 2088741 . - 0 MSMEG_2007 MSMEG_2007 putative HpcE protein identified by match to protein family HMM PF01557 A0QTY3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2088661 2088927 . + 0 MSMEG_2008 MSMEG_2008 hypothetical protein identified by Glimmer2; putative A0QTY4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2088924 2089604 . + 0 MSMEG_2009 MSMEG_2009 regulatory protein GntR, HTH:GntR identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QTY5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2089639 2089956 . - 0 MSMEG_2010 MSMEG_2010 stress responsive A/B Barrel Domain superfamily protein identified by match to protein family HMM PF07876 A0QTY6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2090102 2091106 . - 0 MSMEG_2011 MSMEG_2011 transcriptional regulator, LacI family protein identified by match to protein family HMM PF00356; match to protein family HMM PF00532 A0QTY7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2106472 2106894 . - 0 MSMEG_2027 MSMEG_2027 conserved hypothetical protein TIGR00026 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0QU01 No unknown NC_008596.1 Mycobrowser_v3 CDS 2091191 2092510 . + 0 MSMEG_2012 hisD histidinol dehydrogenase identified by match to protein family HMM PF00815; match to protein family HMM TIGR00069 A0QTY8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2092507 2093262 . + 0 MSMEG_2013 MSMEG_2013 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0QTY9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2093263 2094348 . - 0 MSMEG_2014 MSMEG_2014 molybdenum import ATP-binding protein ModC identified by match to protein family HMM PF00005; match to protein family HMM PF03459 A0QTZ0 No unknown Rv1859 Rv1859 NC_008596.1 Mycobrowser_v3 CDS 2094345 2095157 . - 0 MSMEG_2015 modB molybdate ABC transporter, permease protein identified by match to protein family HMM PF00528; match to protein family HMM TIGR01581; match to protein family HMM TIGR02141 A0QTZ1 No unknown Rv1858 Rv1858 NC_008596.1 Mycobrowser_v3 CDS 2095154 2095897 . - 0 MSMEG_2016 modA molybdate ABC transporter, periplasmic molybdate-binding protein identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256 A0QTZ2 No unknown Rv1857 Rv1857 NC_008596.1 Mycobrowser_v3 CDS 2095894 2096298 . - 0 MSMEG_2017 MSMEG_2017 transcriptional regulator, MerR family protein identified by match to protein family HMM PF00376; match to protein family HMM PF03459; match to protein family HMM TIGR01764 A0QTZ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2096408 2097154 . + 0 MSMEG_2019 MSMEG_2019 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QTZ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2098884 2100914 . + 0 MSMEG_2021 MSMEG_2021 lipopolysaccharide biosynthesis acyltransferase, M identified by match to protein family HMM PF01757 A0QTZ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2101118 2102572 . + 0 MSMEG_2022 MSMEG_2022 GntT protein, putative identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM PF06808 A0QTZ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2102587 2103825 . + 0 MSMEG_2023 MSMEG_2023 CAIB/BAIF family protein identified by match to protein family HMM PF02515 A0QTZ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2103822 2104766 . + 0 MSMEG_2024 MSMEG_2024 hydroxymethylglutaryl-CoA lyase identified by match to protein family HMM PF00682 A0QTZ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2104783 2105565 . + 0 MSMEG_2025 MSMEG_2025 putative IclR family protein transcriptional regulator identified by match to protein family HMM PF01614 A0QTZ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2105584 2106414 . + 0 MSMEG_2026 MSMEG_2026 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QU00 No unknown NC_008596.1 Mycobrowser_v3 CDS 2106948 2108135 . - 0 MSMEG_2028 MSMEG_2028 chloramphenicol resistance protein identified by match to protein family HMM PF07690 A0QU02 No unknown NC_008596.1 Mycobrowser_v3 CDS 2108135 2108896 . - 0 MSMEG_2029 MSMEG_2029 3-ketoacyl-ACP/CoA redutase identified by match to protein family HMM PF00106 A0QU03 No unknown NC_008596.1 Mycobrowser_v3 CDS 2108966 2109559 . + 0 MSMEG_2030 MSMEG_2030 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QU04 No unknown NC_008596.1 Mycobrowser_v3 CDS 2109561 2109743 . - 0 MSMEG_2031 MSMEG_2031 hypothetical protein identified by Glimmer2; putative A0QU05 No unknown NC_008596.1 Mycobrowser_v3 CDS 2109768 2110526 . + 0 MSMEG_2032 MSMEG_2032 conserved hypothetical protein identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044 A0QU06 No unknown NC_008596.1 Mycobrowser_v3 CDS 97891 99105 . - 0 MSMEG_0073 MSMEG_0073 This gene is disrupted by an IS1549 element.; IS1549, transposase, interruption-N; identified by similarity to GP:2935133; match to protein family HMM PF01609 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2110538 2111509 . - 0 MSMEG_2033 MSMEG_2033 oxidoreductase, zinc-binding dehydrogenase family protein identified by match to protein family HMM PF00107 A0QU07 No unknown Rv3141 Rv3141 NC_008596.1 Mycobrowser_v3 CDS 2111627 2112715 . + 0 MSMEG_2034 MSMEG_2034 aryl-alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QU08 No unknown NC_008596.1 Mycobrowser_v3 CDS 2112758 2113684 . + 0 MSMEG_2036 MSMEG_2036 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0QU09 No unknown Rv3171c Rv3171c NC_008596.1 Mycobrowser_v3 CDS 2113659 2115026 . - 0 MSMEG_2035 MSMEG_2035 amine oxidase [flavin-containing] B identified by match to protein family HMM PF01266; match to protein family HMM PF01593 A0QU10 No unknown Rv3170 Rv3170 NC_008596.1 Mycobrowser_v3 CDS 2115046 2116035 . + 0 MSMEG_2037 MSMEG_2037 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QU11 No unknown NC_008596.1 Mycobrowser_v3 CDS 2116080 2117639 . + 0 MSMEG_2038 MSMEG_2038 monooxygenase, flavin-binding family protein identified by match to protein family HMM PF01266 A0QU12 No unknown Rv0565c Rv0565c NC_008596.1 Mycobrowser_v3 CDS 2117665 2118420 . - 0 MSMEG_2039 MSMEG_2039 putative transcriptional regulator identified by match to protein family HMM PF00165 A0QU13 No unknown NC_008596.1 Mycobrowser_v3 CDS 2118476 2118826 . + 0 MSMEG_2040 MSMEG_2040 hypothetical protein identified by Glimmer2; putative A0QU14 No unknown NC_008596.1 Mycobrowser_v3 CDS 2119958 2121094 . - 0 MSMEG_2042 MSMEG_2042 phosphotransferase enzyme family protein identified by match to protein family HMM PF01636 A0QU15,A4ZHS1 No unknown Rv3168 Rv3168 NC_008596.1 Mycobrowser_v3 CDS 2121141 2121749 . + 0 MSMEG_2043 MSMEG_2043 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QU16 No unknown NC_008596.1 Mycobrowser_v3 CDS 2121822 2123135 . + 0 MSMEG_2044 MSMEG_2044 integral membrane transport protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QU17 No unknown NC_008596.1 Mycobrowser_v3 CDS 2123135 2124499 . + 0 MSMEG_2045 MSMEG_2045 monoxygenase identified by match to protein family HMM PF00296 A0QU18 No unknown NC_008596.1 Mycobrowser_v3 CDS 2124514 2125188 . + 0 MSMEG_2046 MSMEG_2046 GlcNAc-PI de-N-acetylase family protein identified by match to protein family HMM PF02585 A0QU19 No unknown NC_008596.1 Mycobrowser_v3 CDS 2125208 2126242 . + 0 MSMEG_2048 MSMEG_2048 alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QU20 No unknown NC_008596.1 Mycobrowser_v3 CDS 2126239 2127006 . - 0 MSMEG_2047 MSMEG_2047 probable enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QU21 No unknown NC_008596.1 Mycobrowser_v3 CDS 2127094 2127675 . + 0 MSMEG_2049 MSMEG_2049 putative transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QU22 No unknown NC_008596.1 Mycobrowser_v3 CDS 2127764 2129329 . - 0 MSMEG_2050 nuoN NADH-quinone oxidoreductase, N subunit identified by match to protein family HMM PF00361; match to protein family HMM TIGR01770 A0QU23 No unknown Rv3158 Rv3158 NC_008596.1 Mycobrowser_v3 CDS 2129331 2130920 . - 0 MSMEG_2051 nuoM NADH-quinone oxidoreductase, M subunit identified by similarity to SP:P50974; match to protein family HMM PF00361; match to protein family HMM TIGR01972 A0QU24 No unknown Rv3157 Rv3157 NC_008596.1 Mycobrowser_v3 CDS 2130914 2132803 . - 0 MSMEG_2052 nuoL NADH-quinone oxidoreductase, L subunit identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974 A0QU25 No unknown Rv3156 Rv3156 NC_008596.1 Mycobrowser_v3 CDS 2132811 2133110 . - 0 MSMEG_2053 nuoK NADH-quinone oxidoreductase, k subunit identified by match to protein family HMM PF00420 A0QU26 No unknown Rv3155 Rv3155 NC_008596.1 Mycobrowser_v3 CDS 2133116 2133874 . - 0 MSMEG_2054 MSMEG_2054 NADH dehydrogenase subunit j identified by match to protein family HMM PF00499 A0QU27 No unknown Rv3154 Rv3154 NC_008596.1 Mycobrowser_v3 CDS 2133871 2134413 . - 0 MSMEG_2055 nuoI NADH-quinone oxidoreductase, I subunit identified by similarity to SP:P33604; match to protein family HMM PF00037; match to protein family HMM TIGR01971 A0QU28 No unknown Rv3153 Rv3153 NC_008596.1 Mycobrowser_v3 CDS 2161210 2161590 . + 0 MSMEG_2084 MSMEG_2084 conserved hypothetical protein A0QU57 No unknown NC_008596.1 Mycobrowser_v3 CDS 2134406 2135632 . - 0 MSMEG_2056 nuoH NADH-quinone oxidoreductase, H subunit identified by similarity to SP:P42032; match to protein family HMM PF00146 A0QU29 No unknown Rv3152 Rv3152 NC_008596.1 Mycobrowser_v3 CDS 2135629 2138013 . - 0 MSMEG_2057 nuoG NADH-quinone oxidoreductase, G subunit identified by match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01973 A0QU30 No unknown Rv3151 Rv3151 NC_008596.1 Mycobrowser_v3 CDS 2138102 2139433 . - 0 MSMEG_2058 nuoF NADH-quinone oxidoreductase, F subunit identified by similarity to SP:P31979; match to protein family HMM PF01512; match to protein family HMM TIGR01959 A0QU31 No unknown Rv3150 Rv3150 NC_008596.1 Mycobrowser_v3 CDS 2537190 2537507 . + 0 MSMEG_2457 MSMEG_2457 hypothetical protein identified by Glimmer2; putative A0QV59 No unknown NC_008596.1 Mycobrowser_v3 CDS 2139430 2140167 . - 0 MSMEG_2059 MSMEG_2059 NADH-quinone oxidoreductase chain e identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958 A0QU32 No unknown Rv3149 Rv3149 NC_008596.1 Mycobrowser_v3 CDS 2140228 2141556 . - 0 MSMEG_2060 nuoD NADH-quinone oxidoreducatase, D subunit identified by similarity to SP:Q56220; match to protein family HMM PF00346; match to protein family HMM TIGR01962 A0QU33 No unknown Rv3148 Rv3148 NC_008596.1 Mycobrowser_v3 CDS 2141556 2142272 . - 0 MSMEG_2061 MSMEG_2061 NADH-quinone oxidoreductase chain c identified by match to protein family HMM PF00329; match to protein family HMM TIGR01961 A0QU34 No unknown Rv3147 Rv3147 NC_008596.1 Mycobrowser_v3 CDS 2142269 2142823 . - 0 MSMEG_2062 nuoB NADH-quinone oxidoreductase, B subunit identified by similarity to SP:P33598; match to protein family HMM PF01058; match to protein family HMM TIGR01957 A0QU35 No unknown Rv3146 Rv3146 NC_008596.1 Mycobrowser_v3 CDS 2142814 2143182 . - 0 MSMEG_2063 nuoA NADH-quinone oxidoreductase, a subunit identified by match to protein family HMM PF00507 A0QU36 No unknown Rv3145 Rv3145 NC_008596.1 Mycobrowser_v3 CDS 2143366 2143764 . - 0 MSMEG_2064 MSMEG_2064 two-component system response regulator A0QU37 No unknown Rv3143 Rv3143 NC_008596.1 Mycobrowser_v3 CDS 2143828 2144346 . - 0 MSMEG_2065 MSMEG_2065 YceI like family protein identified by match to protein family HMM PF04264 A0QU38 No unknown NC_008596.1 Mycobrowser_v3 CDS 2144378 2144779 . - 0 MSMEG_2066 MSMEG_2066 conserved hypothetical protein A0QU39 No unknown NC_008596.1 Mycobrowser_v3 CDS 2144836 2145471 . + 0 MSMEG_2067 MSMEG_2067 methyltransferase type 12 identified by match to protein family HMM PF05724 A0QU40 No unknown Rv2675c Rv2675c NC_008596.1 Mycobrowser_v3 CDS 2145832 2146821 . - 0 MSMEG_2069 MSMEG_2069 phosphotransferase enzyme family protein identified by match to protein family HMM PF01636 A0QU42 No unknown NC_008596.1 Mycobrowser_v3 CDS 2178248 2179069 . - 0 MSMEG_2102 MSMEG_2102 nitrate transport ATP-binding protein NrtD identified by match to protein family HMM PF00005 A0QU72 No unknown NC_008596.1 Mycobrowser_v3 CDS 2146818 2148062 . - 0 MSMEG_2070 MSMEG_2070 acyl-CoA dehydrogenase family protein identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QU43 No unknown NC_008596.1 Mycobrowser_v3 CDS 2148073 2148684 . - 0 MSMEG_2071 MSMEG_2071 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QU44 No unknown NC_008596.1 Mycobrowser_v3 CDS 2148691 2149593 . - 0 MSMEG_2072 MSMEG_2072 3-hydroxy-3-methylglutaryl-CoA lyase identified by match to protein family HMM PF00682 A0QU45 No unknown NC_008596.1 Mycobrowser_v3 CDS 2149593 2150795 . - 0 MSMEG_2073 MSMEG_2073 CAIB/BAIF family protein identified by match to protein family HMM PF02515 A0QU46 No unknown NC_008596.1 Mycobrowser_v3 CDS 223997 224775 . + 0 MSMEG_0199 MSMEG_0199 aminoglycoside phosphotransferase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF03881 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2150792 2152021 . - 0 MSMEG_2074 MSMEG_2074 conserved hypothetical protein A0QU47 No unknown NC_008596.1 Mycobrowser_v3 CDS 2152022 2153125 . - 0 MSMEG_2075 hmgA homogentisate 1,2-dioxygenase identified by match to protein family HMM PF04209 A0QU48 No unknown NC_008596.1 Mycobrowser_v3 CDS 2153254 2153850 . - 0 MSMEG_2076 MSMEG_2076 conserved hypothetical protein identified by match to protein family HMM PF04229 A0QU49 No unknown NC_008596.1 Mycobrowser_v3 CDS 2153861 2155042 . - 0 MSMEG_2077 MSMEG_2077 acyl-CoA dehydrogenase, C- domain protein identified by match to protein family HMM PF08028 A0QU50 No unknown NC_008596.1 Mycobrowser_v3 CDS 2155501 2156478 . + 0 MSMEG_2078 MSMEG_2078 antigen 85-C identified by match to protein family HMM PF00756 A0QU51 No unknown Rv1886c,Rv3804c Rv1886c,Rv3804c NC_008596.1 Mycobrowser_v3 CDS 2156545 2157543 . - 0 MSMEG_2079 MSMEG_2079 alcohol dehydrogenase identified by match to protein family HMM PF00107; match to protein family HMM TIGR02823 A0QU52 No unknown NC_008596.1 Mycobrowser_v3 CDS 2157633 2158853 . - 0 MSMEG_2080 MSMEG_2080 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QU53 No unknown Rv3140 Rv3140 NC_008596.1 Mycobrowser_v3 CDS 2158889 2160217 . - 0 MSMEG_2081 MSMEG_2081 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QU54 No unknown Rv3139 Rv3139 NC_008596.1 Mycobrowser_v3 CDS 2160227 2160346 . + 0 MSMEG_2082 MSMEG_2082 hypothetical protein identified by Glimmer2; putative A0QU55 No unknown NC_008596.1 Mycobrowser_v3 CDS 2160404 2161186 . - 0 MSMEG_2083 MSMEG_2083 inositol monophosphatase identified by match to protein family HMM PF00459; match to protein family HMM TIGR02067 A0QU56 No unknown Rv3137 Rv3137 NC_008596.1 Mycobrowser_v3 CDS 2163153 2164259 . + 0 MSMEG_2086 prfB peptide chain release factor 2 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020 A0QU58,A4ZHS2 No unknown Rv3105c Rv3105c NC_008596.1 Mycobrowser_v3 CDS 2164249 2165229 . + 0 MSMEG_2087 MSMEG_2087 transporter, small conductance mechanosensitive ion channel (MscS) family protein identified by match to protein family HMM PF00924 A0QU59 No unknown Rv3104c Rv3104c NC_008596.1 Mycobrowser_v3 CDS 2165307 2165747 . + 0 MSMEG_2088 MSMEG_2088 hypothetical proline-rich protein A0QU60 No unknown Rv3103c Rv3103c NC_008596.1 Mycobrowser_v3 CDS 2165793 2166482 . + 0 MSMEG_2089 ftsE cell division ATP-binding protein FtsE identified by match to protein family HMM PF00005; match to protein family HMM TIGR00960; match to protein family HMM TIGR02673 A0QU61 No unknown Rv3102c Rv3102c NC_008596.1 Mycobrowser_v3 CDS 3981603 3982166 . - 0 MSMEG_3912 MSMEG_3912 acetoacetyl-CoA reductase A0QZ64 No unknown NC_008596.1 Mycobrowser_v3 CDS 2166483 2167379 . + 0 MSMEG_2090 MSMEG_2090 putative cell division protein FtsX identified by match to protein family HMM PF02687 A0QU62 No unknown Rv3101c Rv3101c NC_008596.1 Mycobrowser_v3 CDS 2167390 2167875 . + 0 MSMEG_2091 smpB SsrA-binding protein identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086 A0QU63 No unknown Rv3100c Rv3100c NC_008596.1 Mycobrowser_v3 CDS 2168040 2169143 . + 0 MSMEG_2092 MSMEG_2092 D-aminopeptidase identified by match to protein family HMM PF03576 A0QU64 No unknown NC_008596.1 Mycobrowser_v3 CDS 2169678 2171087 . - 0 MSMEG_2094 MSMEG_2094 56kDa selenium binding protein identified by match to protein family HMM PF05694 A0QU65 No unknown NC_008596.1 Mycobrowser_v3 CDS 2171219 2172142 . + 0 MSMEG_2095 MSMEG_2095 serine esterase, cutinase family protein identified by match to protein family HMM PF01083 A0QU66 No unknown Rv3451 Rv3451 NC_008596.1 Mycobrowser_v3 CDS 2172275 2173018 . - 0 MSMEG_2096 MSMEG_2096 integral membrane protein identified by match to protein family HMM PF01925 A0QU67 No unknown NC_008596.1 Mycobrowser_v3 CDS 2189849 2190382 . + 0 MSMEG_2115 MSMEG_2115 conserved hypothetical protein A0QU83 No unknown NC_008596.1 Mycobrowser_v3 CDS 2173038 2174138 . - 0 MSMEG_2097 MSMEG_2097 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase identified by match to protein family HMM PF03417 A0QU68 No unknown NC_008596.1 Mycobrowser_v3 CDS 2174138 2175013 . - 0 MSMEG_2098 MSMEG_2098 fumarylacetoacetate hydrolase family protein identified by match to protein family HMM PF01557 A0QU69 No unknown NC_008596.1 Mycobrowser_v3 CDS 2175058 2176023 . - 0 MSMEG_2099 MSMEG_2099 ABC transporter, substrate binding protein [nitrate/sulfonate], putative A0QU70 No unknown NC_008596.1 Mycobrowser_v3 CDS 2176102 2177433 . - 0 MSMEG_2100 MSMEG_2100 peptidase family protein M20/M25/M40 identified by match to protein family HMM PF01546; match to protein family HMM PF07687 A0QU71 No unknown NC_008596.1 Mycobrowser_v3 CDS 2179121 2180020 . - 0 MSMEG_2103 MSMEG_2103 5,10-methylenetetrahydromethanopterin reductase A0QU73 No unknown NC_008596.1 Mycobrowser_v3 CDS 2180401 2181750 . - 0 MSMEG_2104 MSMEG_2104 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00155; match to protein family HMM PF00392 A0QU74 No unknown NC_008596.1 Mycobrowser_v3 CDS 2182038 2183003 . - 0 MSMEG_2105 MSMEG_2105 ATP dependent DNA ligase A0QU75 No unknown NC_008596.1 Mycobrowser_v3 CDS 2183185 2184645 . + 0 MSMEG_2107 MSMEG_2107 conserved hypothetical protein A0QU76 No unknown Rv1754c Rv1754c NC_008596.1 Mycobrowser_v3 CDS 2184617 2185249 . - 0 MSMEG_2106 MSMEG_2106 putative transcriptional regulator identified by match to protein family HMM PF00440; match to protein family HMM PF02796 A0QU77 No unknown NC_008596.1 Mycobrowser_v3 CDS 2185414 2186352 . + 0 MSMEG_2108 MSMEG_2108 conserved hypothetical protein A0QU78 No unknown NC_008596.1 Mycobrowser_v3 CDS 2186345 2187502 . + 0 MSMEG_2109 MSMEG_2109 conserved hypothetical protein A0QU79 No unknown NC_008596.1 Mycobrowser_v3 CDS 2187612 2188592 . + 0 MSMEG_2110 MSMEG_2110 conserved hypothetical protein A0QU80 No unknown NC_008596.1 Mycobrowser_v3 CDS 2188645 2189190 . + 0 MSMEG_2111 MSMEG_2111 chorismate mutase identified by match to protein family HMM PF01817; match to protein family HMM TIGR01806 A0QU81 No unknown Rv1885c Rv1885c NC_008596.1 Mycobrowser_v3 CDS 2189268 2189852 . + 0 MSMEG_2112 MSMEG_2112 secreted protein A0QU82 No unknown NC_008596.1 Mycobrowser_v3 CDS 2190853 2192436 . - 0 MSMEG_2116 MSMEG_2116 PTS system, glucose-specific IIBC component identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826 A0QU86 No unknown NC_008596.1 Mycobrowser_v3 CDS 2192581 2193051 . + 0 MSMEG_2117 MSMEG_2117 beta-glucoside-specific EII permease identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830 A0QU87 No unknown NC_008596.1 Mycobrowser_v3 CDS 2240142 2240876 . + 0 MSMEG_2164 MSMEG_2164 transcriptional regulator, putative identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QUD0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2193073 2193858 . + 0 MSMEG_2118 nagB glucosamine-6-phosphate isomerase identified by match to protein family HMM PF01182; match to protein family HMM TIGR00502 A0QU88 No unknown NC_008596.1 Mycobrowser_v3 CDS 2193860 2195017 . + 0 MSMEG_2119 nagA N-acetylglucosamine-6-phosphate deacetylase identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221 A0QU89 No unknown Rv3332 Rv3332 NC_008596.1 Mycobrowser_v3 CDS 2195157 2197775 . + 0 MSMEG_2120 MSMEG_2120 tetratricopeptide repeat family protein identified by match to protein family HMM PF00196 A0QU90 No unknown NC_008596.1 Mycobrowser_v3 CDS 3111537 3111776 . + 0 MSMEG_3038 MSMEG_3038 hypothetical protein identified by Glimmer2; putative A0QWR6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2228170 2228763 . - 0 MSMEG_2153 MSMEG_2153 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QUC0 No unknown Rv3173c Rv3173c NC_008596.1 Mycobrowser_v3 CDS 1929588 1931401 . - 0 MSMEG_1853 MSMEG_1853 Na+/H+ antiporter NhaA; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF06965 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2200199 2200831 . - 0 MSMEG_2122 MSMEG_2122 dihydroxyacetone kinase, L subunit identified by match to protein family HMM PF02734; match to protein family HMM TIGR02365 A0QU92 No unknown NC_008596.1 Mycobrowser_v3 CDS 2200833 2201831 . - 0 MSMEG_2123 dhaK dihydroxyacetone kinase, DhaK subunit identified by match to protein family HMM PF02733; match to protein family HMM TIGR02363 A0QU93 No unknown NC_008596.1 Mycobrowser_v3 CDS 2201841 2202608 . - 0 MSMEG_2124 MSMEG_2124 glycerol uptake facilitator, MIP channel identified by match to protein family HMM PF00230 A0QU94 No unknown NC_008596.1 Mycobrowser_v3 CDS 2202762 2203508 . + 0 MSMEG_2125 MSMEG_2125 glycerol operon regulatory protein identified by match to protein family HMM PF01614 A0QU95 No unknown NC_008596.1 Mycobrowser_v3 CDS 2203331 2203729 . + 0 MSMEG_2126 MSMEG_2126 hypothetical protein identified by Glimmer2; putative A0QU96 No unknown NC_008596.1 Mycobrowser_v3 CDS 2203799 2204158 . + 0 MSMEG_2127 MSMEG_2127 conserved hypothetical protein identified by match to protein family HMM PF04343 A0QU97 No unknown Rv3073c Rv3073c NC_008596.1 Mycobrowser_v3 CDS 2204236 2204883 . + 0 MSMEG_2128 MSMEG_2128 malonyl CoA decarboxylase A0QU98 No unknown Rv1347c Rv1347c NC_008596.1 Mycobrowser_v3 CDS 2205039 2205167 . + 0 MSMEG_2129 MSMEG_2129 hypothetical protein identified by Glimmer2; putative A0QU99 No unknown NC_008596.1 Mycobrowser_v3 CDS 2271168 2271569 . + 0 MSMEG_2192 MSMEG_2192 conserved hypothetical protein A0QUF8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2205201 2206385 . - 0 MSMEG_2130 MSMEG_2130 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QUA0 No unknown Rv1346 Rv1346 NC_008596.1 Mycobrowser_v3 CDS 2206382 2207962 . - 0 MSMEG_2131 MSMEG_2131 acyl-CoA synthase identified by match to protein family HMM PF00501 A0QUA1 No unknown Rv1345 Rv1345 NC_008596.1 Mycobrowser_v3 CDS 2207959 2208228 . - 0 MSMEG_2132 MSMEG_2132 acyl carrier protein Acp identified by match to protein family HMM PF00550 A0QUA2 No unknown Rv1344 Rv1344 NC_008596.1 Mycobrowser_v3 CDS 2208288 2209358 . - 0 MSMEG_2133 MSMEG_2133 conserved hypothetical protein, putative identified by match to protein family HMM PF02641 A0QUA3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2209355 2209720 . - 0 MSMEG_2134 crcB CrcB protein identified by match to protein family HMM PF02537; match to protein family HMM TIGR00494 A0QUA4 No unknown Rv3070 Rv3070 NC_008596.1 Mycobrowser_v3 CDS 2209717 2210115 . - 0 MSMEG_2135 MSMEG_2135 putative CrcB protein identified by match to protein family HMM PF02537 A0QUA5 No unknown Rv3069 Rv3069 NC_008596.1 Mycobrowser_v3 CDS 2867294 2867707 . + 0 MSMEG_2802 MSMEG_2802 hypothetical protein identified by Glimmer2; putative A0QW45 No unknown NC_008596.1 Mycobrowser_v3 CDS 3938878 3939354 . - 0 MSMEG_3866 MSMEG_3866 conserved hypothetical protein A0QZ19 No unknown Rv3162c Rv3162c NC_008596.1 Mycobrowser_v3 CDS 2210186 2211820 . + 0 MSMEG_2136 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific identified by similarity to SP:P36938; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01132 A0QUA6 No unknown Rv3068c Rv3068c NC_008596.1 Mycobrowser_v3 CDS 2211817 2213085 . + 0 MSMEG_2137 MSMEG_2137 permease of the major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QUA7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2213383 2213484 . - 0 MSMEG_2139 MSMEG_2139 hypothetical protein identified by Glimmer2; putative A0QUA8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2213518 2214726 . - 0 MSMEG_2140 MSMEG_2140 Fic protein family protein identified by match to protein family HMM PF02661 A0QUA9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2214785 2215036 . + 0 MSMEG_2141 MSMEG_2141 gp35 protein A0QUB0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2215051 2215749 . + 0 MSMEG_2142 MSMEG_2142 gp36 protein A0QUB1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2216197 2216793 . - 0 MSMEG_2144 MSMEG_2144 conserved hypothetical protein A0QUB3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2217015 2217425 . + 0 MSMEG_2145 MSMEG_2145 conserved domain protein A0QUB4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2241113 2241976 . + 0 MSMEG_2165 MSMEG_2165 transketolase, N- subunit identified by match to protein family HMM PF00456 A0QUD1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2217440 2221084 . + 0 MSMEG_2146 MSMEG_2146 gp15 protein A0QUB5 No unknown Rv3508 Rv3508 NC_008596.1 Mycobrowser_v3 CDS 2222742 2224376 . + 0 MSMEG_2148 MSMEG_2148 HNH endonuclease domain protein identified by match to protein family HMM PF01844 A0QUB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2224483 2224938 . + 0 MSMEG_2149 MSMEG_2149 hypothetical protein identified by Glimmer2; putative A0QUB7,A4ZHS3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2225109 2225963 . - 0 MSMEG_2150 MSMEG_2150 putative transposition helper protein identified by match to protein family HMM PF01695 A0QTI6 No unknown Rv3638 Rv3638 NC_008596.1 Mycobrowser_v3 CDS 2778898 2779581 . - 0 MSMEG_2706 gmhA phosphoheptose isomerase A0QVV2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2225960 2227321 . - 0 MSMEG_2151 MSMEG_2151 transposase IstA protein, putative identified by match to protein family HMM PF00665 A0QTI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2228863 2229687 . + 0 MSMEG_2154 MSMEG_2154 conserved hypothetical protein A0QUC1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2229760 2230743 . + 0 MSMEG_2155 MSMEG_2155 trans-2-enoyl-CoA reductase identified by match to protein family HMM PF00107 A0QUC2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2230794 2231729 . + 0 MSMEG_2156 MSMEG_2156 conserved hypothetical protein identified by match to protein family HMM PF05368 A0QUC3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2231876 2232784 . + 0 MSMEG_2157 MSMEG_2157 hypothetical protein identified by Glimmer2; putative A0QUC4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2232790 2233644 . + 0 MSMEG_2159 MSMEG_2159 conserved hypothetical protein identified by match to protein family HMM PF05114 A0QUC5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2237715 2238554 . + 0 MSMEG_2162 MSMEG_2162 MmcJ protein A0QUC8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2238574 2240016 . + 0 MSMEG_2163 MSMEG_2163 aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0QUC9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2241973 2243007 . + 0 MSMEG_2166 MSMEG_2166 transketoloase, C half identified by match to protein family HMM PF02779; match to protein family HMM PF02780 A0QUD2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2243141 2244442 . + 0 MSMEG_2167 MSMEG_2167 aminopeptidase, putative identified by match to protein family HMM PF00557 A0QUD3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2244465 2244662 . + 0 MSMEG_2168 MSMEG_2168 hypothetical protein identified by Glimmer2; putative A0QUD4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2244650 2245630 . + 0 MSMEG_2170 MSMEG_2170 3-hydroxyisobutyrate dehydrogenase family protein identified by match to protein family HMM PF03446; match to protein family HMM PF03807 A0QUD5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2289614 2290282 . + 0 MSMEG_2209 MSMEG_2209 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QUH5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2305317 2306081 . + 0 MSMEG_2227 MSMEG_2227 carnitinyl-CoA dehydratase identified by match to protein family HMM PF00378 A0QUJ1 No unknown Rv0222 Rv0222 NC_008596.1 Mycobrowser_v3 CDS 2245536 2247044 . - 0 MSMEG_2169 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit identified by match to protein family HMM PF01039 A0QUD6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2247041 2248261 . - 0 MSMEG_2171 MSMEG_2171 L-carnitine dehydratase/bile acid-inducible protein F identified by match to protein family HMM PF02515 A0QUD7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2248470 2249870 . - 0 MSMEG_2172 MSMEG_2172 dicarboxylate-carrier protein identified by match to protein family HMM PF03600; match to protein family HMM PF07158 A0QUD8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2250029 2250721 . + 0 MSMEG_2173 MSMEG_2173 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QUD9 No unknown Rv0494 Rv0494 NC_008596.1 Mycobrowser_v3 CDS 2250877 2253087 . + 0 MSMEG_2174 MSMEG_2174 superfamily protein I DNA or RNA helicase A0QUE0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2253444 2254820 . - 0 MSMEG_2175 MSMEG_2175 nitrilotriacetate monooxygenase component A A0QUE2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2254841 2256019 . - 0 MSMEG_2177 MSMEG_2177 fmnh2-utilizing oxygenase A0QUE3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2256187 2256384 . - 0 MSMEG_2178 MSMEG_2178 integral membrane protein A0QUE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2256454 2257758 . + 0 MSMEG_2179 MSMEG_2179 transcriptional regulatory protein identified by match to protein family HMM PF00440 A0QUE5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2257799 2258323 . - 0 MSMEG_2180 MSMEG_2180 RemK protein A0QUE6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2258412 2259011 . + 0 MSMEG_2182 MSMEG_2182 transcriptional regulator identified by match to protein family HMM PF00440 A0QUE7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2258987 2259802 . - 0 MSMEG_2181 MSMEG_2181 cell filamentation protein identified by match to protein family HMM PF02661 A0QUE8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2259796 2260779 . - 0 MSMEG_2183 MSMEG_2183 conserved hypothetical protein A0QUE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2867745 2867888 . + 0 MSMEG_2803 MSMEG_2803 hypothetical protein identified by Glimmer2; putative A0QW46 No unknown NC_008596.1 Mycobrowser_v3 CDS 2260965 2262506 . + 0 MSMEG_2184 MSMEG_2184 amino acid permease identified by match to protein family HMM PF00324 A0QUF0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2262515 2263351 . + 0 MSMEG_2185 MSMEG_2185 conserved hypothetical protein A0QUF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2263348 2263971 . + 0 MSMEG_2186 MSMEG_2186 conserved hypothetical protein A0QUF2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2263968 2265989 . + 0 MSMEG_2187 MSMEG_2187 urea amidolyase identified by match to protein family HMM PF02626; match to protein family HMM PF02682; match to protein family HMM TIGR00724 A0QUF3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2265986 2267656 . + 0 MSMEG_2189 atzF allophanate hydrolase identified by match to protein family HMM PF01425; match to protein family HMM TIGR02713 A0QUF4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2281354 2281806 . + 0 MSMEG_2201 MSMEG_2201 ZbpA protein identified by match to protein family HMM PF01575 A0QUG7 No unknown Rv0130 Rv0130 NC_008596.1 Mycobrowser_v3 CDS 2267604 2268578 . - 0 MSMEG_2188 MSMEG_2188 integral membrane protein identified by match to protein family HMM PF00892 A0QUF5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2268648 2269790 . - 0 MSMEG_2190 MSMEG_2190 acyl-CoA dehydrogenase domain protein identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QUF6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2269802 2271034 . - 0 MSMEG_2191 MSMEG_2191 acyl-CoA dehydrogenase family protein identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771 A0QUF7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2271642 2272415 . + 0 MSMEG_2194 MSMEG_2194 MerR-family protein transcriptional regulator identified by match to protein family HMM PF00376; match to protein family HMM PF07739 A0QUF9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2272412 2273065 . - 0 MSMEG_2193 MSMEG_2193 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QUG0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2273072 2273773 . - 0 MSMEG_2195 MSMEG_2195 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QUG1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2274343 2275170 . + 0 MSMEG_2197 MSMEG_2197 hypothetical protein identified by Glimmer2; putative A0QUG2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2291531 2292370 . - 0 MSMEG_2211 MSMEG_2211 DNA-binding protein identified by match to protein family HMM PF01381 A0QUH6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2055543 2056650 . + 0 MSMEG_1973 MSMEG_1973 propane monooxygenase hydroxylase small subunit; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2275150 2276997 . - 0 MSMEG_2196 MSMEG_2196 sensory box/response regulator identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254 A0QUG3 No unknown Rv1354c Rv1354c NC_008596.1 Mycobrowser_v3 CDS 2277027 2279198 . - 0 MSMEG_2198 MSMEG_2198 ThiF family protein identified by match to protein family HMM PF00899 A0QUG4 No unknown Rv1355c Rv1355c NC_008596.1 Mycobrowser_v3 CDS 2279195 2279959 . - 0 MSMEG_2199 MSMEG_2199 conserved hypothetical protein A0QUG5 No unknown Rv1356c Rv1356c NC_008596.1 Mycobrowser_v3 CDS 2280439 2281332 . + 0 MSMEG_2200 purU formyltetrahydrofolate deformylase identified by match to protein family HMM PF00551; match to protein family HMM PF01842; match to protein family HMM TIGR00655 A0QUG6 No unknown Rv2964 Rv2964 NC_008596.1 Mycobrowser_v3 CDS 5389047 5389361 . - 0 MSMEG_5298 MSMEG_5298 hypothetical protein identified by Glimmer2; putative A0R307 No unknown NC_008596.1 Mycobrowser_v3 CDS 2281948 2283312 . + 0 MSMEG_2202 MSMEG_2202 dimethylaniline monooxygenase [N-oxide-forming] 5 identified by match to protein family HMM PF00743 A0QUG8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2283309 2284205 . + 0 MSMEG_2203 MSMEG_2203 alpha/beta hydrolase identified by match to protein family HMM PF00561 A0QUG9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2284280 2285101 . - 0 MSMEG_2204 MSMEG_2204 carveol dehydrogenase ((+)-trans-carveol dehydrogenase) identified by match to protein family HMM PF00106 A0QUH0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2301963 2302109 . + 0 MSMEG_2222 MSMEG_2222 hypothetical protein identified by Glimmer2; putative A0QUI6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3403263 3403796 . + 0 MSMEG_3323 MSMEG_3323 conserved hypothetical protein A0QXJ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2285144 2286337 . - 0 MSMEG_2205 MSMEG_2205 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QUH1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2286455 2287189 . + 0 MSMEG_2206 fabG 3-oxoacyl-(acyl-carrier-protein) reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QUH2 No unknown Rv1350 Rv1350 NC_008596.1 Mycobrowser_v3 CDS 2287186 2288409 . + 0 MSMEG_2207 MSMEG_2207 beta-ketothiolase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0QUH3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2320363 2321103 . - 0 MSMEG_2239 MSMEG_2239 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QUK3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2288417 2289610 . + 0 MSMEG_2208 MSMEG_2208 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QUH4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3980200 3980706 . + 0 MSMEG_3910 MSMEG_3910 conserved hypothetical protein A0QZ61 No unknown NC_008596.1 Mycobrowser_v3 CDS 2292544 2293488 . + 0 MSMEG_2212 MSMEG_2212 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QUH7 No unknown Rv2263 Rv2263 NC_008596.1 Mycobrowser_v3 CDS 2293527 2294720 . + 0 MSMEG_2213 MSMEG_2213 O-methyltransferase identified by match to protein family HMM PF00891 A0QUH8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2294995 2296497 . - 0 MSMEG_2215 MSMEG_2215 AMP-binding enzyme identified by match to protein family HMM PF00501 A0QUH9,A4ZHS4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2296490 2297974 . - 0 MSMEG_2216 MSMEG_2216 AMP-binding enzyme identified by match to protein family HMM PF00501 A0QUI0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2297967 2299418 . - 0 MSMEG_2217 MSMEG_2217 AMP-dependent synthetase and ligase identified by match to protein family HMM PF00501 A0QUI1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2299418 2300200 . - 0 MSMEG_2218 MSMEG_2218 enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 A0QUI2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2300197 2301003 . - 0 MSMEG_2219 MSMEG_2219 enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 A0QUI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2301024 2301845 . - 0 MSMEG_2220 MSMEG_2220 enoyl-CoA hydratase/isomerase identified by match to protein family HMM PF00378 A0QUI4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2301934 2302098 . + 0 MSMEG_2221 MSMEG_2221 hypothetical protein identified by Glimmer2; putative A0QUI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2302131 2303000 . + 0 MSMEG_2223 MSMEG_2223 enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 A0QUI7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2303045 2304229 . + 0 MSMEG_2224 MSMEG_2224 acetyl-CoA C-acyltransferase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0QUI8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2304294 2305031 . - 0 MSMEG_2225 MSMEG_2225 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440; match to protein family HMM PF02909 A0QUI9 No unknown Rv1353c Rv1353c NC_008596.1 Mycobrowser_v3 CDS 2097139 2098356 . - 0 MSMEG_2018 MSMEG_2018 cytochrome P450 107B1; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2306091 2306888 . + 0 MSMEG_2228 MSMEG_2228 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0QUJ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2307025 2307846 . + 0 MSMEG_2229 MSMEG_2229 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QUJ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2307861 2309111 . + 0 MSMEG_2230 MSMEG_2230 amidohydrolase family protein identified by match to protein family HMM PF04909 A0QUJ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2309115 2310743 . + 0 MSMEG_2231 MSMEG_2231 AMP-binding enzyme identified by match to protein family HMM PF00501 A0QUJ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2310740 2311594 . + 0 MSMEG_2232 MSMEG_2232 amidohydrolase family protein identified by match to protein family HMM PF04909 A0QUJ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2311599 2312648 . + 0 MSMEG_2233 MSMEG_2233 acyl-CoA dehydrogenase, C- domain protein identified by match to protein family HMM PF00441 A0QUJ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2312674 2313864 . + 0 MSMEG_2234 MSMEG_2234 acyl-CoA dehydrogenase, middle domain protein identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0QUJ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2313886 2315121 . - 0 MSMEG_2235 MSMEG_2235 amidohydrolase family protein identified by match to protein family HMM PF04909 A0QUJ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2373164 2373823 . + 0 MSMEG_2290 MSMEG_2290 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QR73 No unknown Rv3058c Rv3058c NC_008596.1 Mycobrowser_v3 CDS 2315214 2316362 . - 0 MSMEG_2236 MSMEG_2236 putative thiolase identified by match to protein family HMM PF02803 A0QUK0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2316524 2318806 . + 0 MSMEG_2237 MSMEG_2237 anaerobic dehydrogenase, typically identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879 A0QUK1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2318803 2320329 . + 0 MSMEG_2238 MSMEG_2238 aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 A0QUK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2335246 2335527 . - 0 MSMEG_2253 MSMEG_2253 hypothetical protein identified by Glimmer2; putative A0QUL7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2321106 2322314 . - 0 MSMEG_2240 MSMEG_2240 cytochrome P450 identified by match to protein family HMM PF00067 A0QUK4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2322534 2324021 . + 0 MSMEG_2242 MSMEG_2242 coniferyl aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0QUK5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2324005 2325657 . - 0 MSMEG_2241 MSMEG_2241 medium chain acyl-CoA synthetase identified by match to protein family HMM PF00501 A0QUK6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2325677 2326282 . - 0 MSMEG_2243 MSMEG_2243 isochorismatase family protein identified by match to protein family HMM PF00857 A0QUK7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2326291 2327307 . - 0 MSMEG_2244 MSMEG_2244 Rieske [2Fe-2S] domain protein identified by match to protein family HMM PF00355 A0QUK8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2327539 2327985 . + 0 MSMEG_2245 MSMEG_2245 bile-acid 7-alpha dehydratase A0QUK9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2327988 2328650 . - 0 MSMEG_2246 MSMEG_2246 conserved hypothetical protein A0QUL0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2328800 2329819 . + 0 MSMEG_2247 MSMEG_2247 dihydrokaempferol 4-reductase identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993 A0QUL1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2408810 2409631 . + 0 MSMEG_2327 MSMEG_2327 nudix hydrolase identified by match to protein family HMM PF00293 A0QRA6 No unknown Rv3040c Rv3040c NC_008596.1 Mycobrowser_v3 CDS 2329816 2330946 . + 0 MSMEG_2249 MSMEG_2249 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QUL2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2330943 2333096 . - 0 MSMEG_2248 MSMEG_2248 two-component system sensor kinase identified by match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730; match to protein family HMM TIGR00229 A0QUL3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2333091 2333234 . + 0 MSMEG_2250 MSMEG_2250 hypothetical protein identified by Glimmer2; putative A0QUL4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2333298 2333648 . + 0 MSMEG_2251 MSMEG_2251 nitrate/nitrite response regulator protein identified by match to protein family HMM PF00072 A0QUL5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2333717 2335201 . + 0 MSMEG_2252 MSMEG_2252 flavin-type hydroxylase identified by match to protein family HMM PF01266; match to protein family HMM PF01494 A0QUL6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2335507 2336553 . + 0 MSMEG_2254 MSMEG_2254 oxalate decarboxylase OxdC, putative identified by match to protein family HMM PF00190; match to protein family HMM PF07883 A0QUL8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2336583 2338136 . - 0 MSMEG_2255 MSMEG_2255 Carboxyl transferase domain protein identified by match to protein family HMM PF01039 A0QUL9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2338240 2339292 . + 0 MSMEG_2256 MSMEG_2256 conserved hypothetical protein A0QUM0 No unknown Rv1360 Rv1360 NC_008596.1 Mycobrowser_v3 CDS 2339303 2340538 . + 0 MSMEG_2257 MSMEG_2257 cytochrome P450-terp identified by match to protein family HMM PF00067 A0QUM1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2340549 2340752 . - 0 MSMEG_2258 MSMEG_2258 conserved hypothetical protein A0QUM2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2340686 2342992 . - 0 MSMEG_2259 MSMEG_2259 carbon starvation protein A identified by match to protein family HMM PF02554 A0QUM3 No unknown Rv3063 Rv3063 NC_008596.1 Mycobrowser_v3 CDS 2343165 2344226 . - 0 MSMEG_2260 MSMEG_2260 putative transcriptional regulator identified by match to protein family HMM PF00165 A0QUM4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2344455 2345024 . + 0 MSMEG_2261 MSMEG_2261 hypothetical protein identified by Glimmer2; putative A0QUM5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2345095 2346066 . + 0 MSMEG_2262 hybA hydrogenase-2, small subunit identified by match to protein family HMM PF01058 A0QUM6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2346098 2347705 . + 0 MSMEG_2263 hybC hydrogenase-2, large subunit identified by match to protein family HMM PF00374 A0QUM7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2347746 2348543 . + 0 MSMEG_2264 MSMEG_2264 peptidase M52, hydrogen uptake protein identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072 A0QUM8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2348549 2348812 . + 0 MSMEG_2266 MSMEG_2266 hypothetical protein identified by Glimmer2; putative A0QUM9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2348802 2350169 . - 0 MSMEG_2265 MSMEG_2265 hypothetical protein identified by Glimmer2; putative A0QUN0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2379342 2379905 . + 0 MSMEG_2296 MSMEG_2296 secreted protein identified by match to protein family HMM PF02525; match to protein family HMM PF03358 A0QR79 No unknown Rv3054c Rv3054c NC_008596.1 Mycobrowser_v3 CDS 2348829 2350079 . + 0 MSMEG_2267 MSMEG_2267 tetratricopeptide repeat domain protein A0QUN1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2350076 2350963 . + 0 MSMEG_2268 MSMEG_2268 conserved hypothetical protein identified by match to protein family HMM PF00355; match to protein family HMM PF01106 A0QUN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2350975 2352150 . + 0 MSMEG_2269 MSMEG_2269 NHL repeat protein identified by match to protein family HMM PF01436 A0QUN3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2352162 2352983 . + 0 MSMEG_2270 MSMEG_2270 hypothetical protein identified by Glimmer2; putative A0QUN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2352990 2353769 . - 0 MSMEG_2271 hypB hydrogenase accessory protein HypB identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073 A0QUN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2353782 2354117 . - 0 MSMEG_2272 hypA hydrogenase nickel insertion protein HypA identified by match to protein family HMM PF01155 A0QUN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2354278 2356566 . + 0 MSMEG_2273 hypF [NiFe] hydrogenase maturation protein HypF identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143 A0QUN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2356566 2356826 . + 0 MSMEG_2274 hypC hydrogenase assembly chaperone HypC/HupF identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074 A0QUN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3403857 3404060 . + 0 MSMEG_3324 MSMEG_3324 hypothetical protein identified by Glimmer2; putative A0QXJ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2356823 2357926 . + 0 MSMEG_2275 hypD hydrogenase expression/formation protein HypD identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075 A0QUN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2357919 2358992 . + 0 MSMEG_2276 hypE hydrogenase expression/formation protein HypE identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124 A0QUP0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2358993 2360522 . - 0 MSMEG_2277 dnl1 DNA ligase I, ATP-dependent identified by match to protein family HMM PF01068; match to protein family HMM PF04675; match to protein family HMM PF04679; match to protein family HMM TIGR00574 A0QUP1 No unknown Rv3062 Rv3062 NC_008596.1 Mycobrowser_v3 CDS 2360646 2362238 . - 0 MSMEG_2278 MSMEG_2278 membrane-bound oxidoreductase identified by match to protein family HMM PF00174; match to protein family HMM PF03404 A0QUP2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5347134 5347541 . - 0 MSMEG_5254 MSMEG_5254 conserved hypothetical protein A0R2W2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2362387 2363154 . + 0 MSMEG_2279 MSMEG_2279 3-hydroxyacyl-CoA dehydrogenase type-2 identified by match to protein family HMM PF00106 A0QUP3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2363217 2364947 . + 0 MSMEG_2280 MSMEG_2280 pyruvate dehydrogenase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 A0QUP4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2365655 2366356 . + 0 MSMEG_2282 MSMEG_2282 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2366364 2367686 . - 0 MSMEG_2283 MSMEG_2283 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2368080 2368895 . + 0 MSMEG_2285 MSMEG_2285 methyltransferase type 11 identified by match to protein family HMM PF01170 A0QR68 No unknown NC_008596.1 Mycobrowser_v3 CDS 2368918 2369979 . + 0 MSMEG_2286 MSMEG_2286 aminoglycoside phosphotransferase identified by match to protein family HMM PF01636 A0QR69 No unknown NC_008596.1 Mycobrowser_v3 CDS 2370008 2370769 . - 0 MSMEG_2287 MSMEG_2287 transport protein identified by match to protein family HMM PF01925 A0QR70 No unknown NC_008596.1 Mycobrowser_v3 CDS 2370961 2371452 . + 0 MSMEG_2288 MSMEG_2288 conserved hypothetical protein A0QR71 No unknown NC_008596.1 Mycobrowser_v3 CDS 2371548 2373032 . - 0 MSMEG_2289 MSMEG_2289 cytochrome p450 identified by match to protein family HMM PF00067 A0QR72 No unknown Rv3059 Rv3059 NC_008596.1 Mycobrowser_v3 CDS 2373847 2374710 . + 0 MSMEG_2291 MSMEG_2291 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QR74 No unknown Rv3057c Rv3057c NC_008596.1 Mycobrowser_v3 CDS 2374713 2376248 . - 0 MSMEG_2292 MSMEG_2292 alkaline phosphatase identified by match to protein family HMM PF00245 A0QR75 No unknown NC_008596.1 Mycobrowser_v3 CDS 2376350 2377534 . - 0 MSMEG_2293 MSMEG_2293 conserved hypothetical protein A0QR76 No unknown NC_008596.1 Mycobrowser_v3 CDS 2377545 2378615 . - 0 MSMEG_2294 dinB DNA polymerase IV identified by match to protein family HMM PF00817 A0QR77 No unknown NC_008596.1 Mycobrowser_v3 CDS 2378620 2379234 . - 0 MSMEG_2295 MSMEG_2295 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QR78 No unknown Rv3055 Rv3055 NC_008596.1 Mycobrowser_v3 CDS 341951 342714 . - 0 MSMEG_0310 MSMEG_0310 SAM-dependent methyltransferase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2381113 2383233 . + 0 MSMEG_2299 MSMEG_2299 ribonucleoside-diphosphate reductase, alpha subunit identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR02506 A0QR81,P0CH00 No unknown Rv3051c Rv3051c NC_008596.1 Mycobrowser_v3 CDS 2384537 2384956 . - 0 MSMEG_2301 MSMEG_2301 glyoxalase/bleomycin resistance protein/dioxygenase identified by match to protein family HMM PF00903 A0QR82 No unknown NC_008596.1 Mycobrowser_v3 CDS 2385126 2385353 . - 0 MSMEG_2302 MSMEG_2302 conserved hypothetical protein A0QR83 No unknown NC_008596.1 Mycobrowser_v3 CDS 2385228 2386637 . + 0 MSMEG_2303 MSMEG_2303 integral membrane transporter identified by match to protein family HMM PF07690 A0QR84 No unknown NC_008596.1 Mycobrowser_v3 CDS 2386634 2386777 . + 0 MSMEG_2304 MSMEG_2304 hypothetical protein identified by Glimmer2; putative A0QR85 No unknown NC_008596.1 Mycobrowser_v3 CDS 2386828 2387679 . + 0 MSMEG_2306 MSMEG_2306 putative acetyltransferase identified by match to protein family HMM PF00583 A0QR86 No unknown NC_008596.1 Mycobrowser_v3 CDS 2387651 2388226 . - 0 MSMEG_2305 MSMEG_2305 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QR87 No unknown NC_008596.1 Mycobrowser_v3 CDS 2388350 2389228 . + 0 MSMEG_2307 MSMEG_2307 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QR88 No unknown NC_008596.1 Mycobrowser_v3 CDS 2389298 2390485 . - 0 MSMEG_2308 MSMEG_2308 geranylgeranyl reductase identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM TIGR02032 A0QR89 No unknown NC_008596.1 Mycobrowser_v3 CDS 2390636 2391373 . + 0 MSMEG_2309 MSMEG_2309 probable transcriptional regulatory protein identified by match to protein family HMM PF00440 A0QR90 No unknown Rv3050c Rv3050c NC_008596.1 Mycobrowser_v3 CDS 2391489 2392988 . + 0 MSMEG_2310 MSMEG_2310 monooxygenase A0QR91 No unknown Rv3049c Rv3049c NC_008596.1 Mycobrowser_v3 CDS 2393083 2393598 . + 0 MSMEG_2311 MSMEG_2311 conserved hypothetical protein A0QR92 No unknown NC_008596.1 Mycobrowser_v3 CDS 2393652 2393801 . + 0 MSMEG_2312 MSMEG_2312 hypothetical protein identified by Glimmer2; putative A0QR93 No unknown NC_008596.1 Mycobrowser_v3 CDS 2393815 2394789 . + 0 MSMEG_2313 MSMEG_2313 ribonucleoside-diphosphate reductase, beta subunit identified by match to protein family HMM PF00268 A0QR94 No unknown Rv3048c Rv3048c NC_008596.1 Mycobrowser_v3 CDS 2394859 2396241 . + 0 MSMEG_2314 MSMEG_2314 putative esterase family protein identified by match to protein family HMM PF00756 A0QR95 No unknown NC_008596.1 Mycobrowser_v3 CDS 358764 359046 . - 0 MSMEG_0322 MSMEG_0322 glyoxylase family protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2396241 2397821 . + 0 MSMEG_2315 MSMEG_2315 conserved hypothetical protein A0QR96 No unknown NC_008596.1 Mycobrowser_v3 CDS 2399432 2400481 . - 0 MSMEG_2317 MSMEG_2317 alcohol dehydrogenase, zinc-containing identified by match to protein family HMM PF00107 A0QR97,P0CH37 No unknown Rv3045 Rv3045 NC_008596.1 Mycobrowser_v3 CDS 2400669 2400944 . - 0 MSMEG_2318 MSMEG_2318 GTP cyclohydrolase II identified by match to protein family HMM PF03795 A0QR98 No unknown NC_008596.1 Mycobrowser_v3 CDS 2400954 2402027 . - 0 MSMEG_2319 MSMEG_2319 Periplasmic binding protein identified by match to protein family HMM PF01497 A0QR99 No unknown Rv3044 Rv3044 NC_008596.1 Mycobrowser_v3 CDS 2404009 2405250 . + 0 MSMEG_2321 serB phosphoserine phosphatase identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488 A0QRA0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2405378 2405671 . + 0 MSMEG_2322 MSMEG_2322 hypothetical protein identified by Glimmer2; putative A0QRA1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2405673 2407112 . - 0 MSMEG_2323 MSMEG_2323 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00155; match to protein family HMM PF00392 A0QRA2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2407176 2407322 . + 0 MSMEG_2324 MSMEG_2324 hypothetical protein identified by Glimmer2; putative A0QRA3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2407319 2408014 . + 0 MSMEG_2325 MSMEG_2325 integral membrane protein identified by match to protein family HMM PF02588 A0QRA4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2407969 2408817 . + 0 MSMEG_2326 MSMEG_2326 ABC-type molybdenum transport system, ATPase component identified by match to protein family HMM PF00005 A0QRA5 No unknown Rv3041c Rv3041c NC_008596.1 Mycobrowser_v3 CDS 3404121 3404624 . - 0 MSMEG_3325 MSMEG_3325 conserved hypothetical protein A0QXJ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2409628 2410335 . + 0 MSMEG_2328 MSMEG_2328 probable enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QRA7 No unknown Rv3039c Rv3039c NC_008596.1 Mycobrowser_v3 CDS 2410370 2411350 . + 0 MSMEG_2329 MSMEG_2329 methyltransferase, UbiE/COQ5 family protein A0QRA8 No unknown Rv3038c Rv3038c NC_008596.1 Mycobrowser_v3 CDS 2411359 2412522 . + 0 MSMEG_2330 MSMEG_2330 SAM-dependent methyltransferase A0QRA9 No unknown Rv3037c Rv3037c NC_008596.1 Mycobrowser_v3 CDS 2412595 2413296 . + 0 MSMEG_2331 MSMEG_2331 immunogenic protein MPB64/MPT64 A0QRB0 No unknown Rv3036c Rv3036c NC_008596.1 Mycobrowser_v3 CDS 2623666 2624094 . - 0 MSMEG_2538 MSMEG_2538 MarR-family protein transcriptional regulator identified by match to protein family HMM PF01047 A0QVD7 No unknown Rv2887 Rv2887 NC_008596.1 Mycobrowser_v3 CDS 2458418 2458879 . - 0 MSMEG_2376 MSMEG_2376 conserved hypothetical protein A0QUY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2413328 2414872 . - 0 MSMEG_2332 MSMEG_2332 amino acid carrier protein identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835 A0QRB1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2414879 2415001 . + 0 MSMEG_2334 MSMEG_2334 hypothetical protein identified by Glimmer2; putative A0QRB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2414990 2416273 . - 0 MSMEG_2333 MSMEG_2333 conserved hypothetical protein A0QRB3 No unknown Rv3035 Rv3035 NC_008596.1 Mycobrowser_v3 CDS 2416370 2417113 . + 0 MSMEG_2335 MSMEG_2335 hexapeptide transferase family protein identified by match to protein family HMM PF00132 A0QRB4 No unknown Rv3034c Rv3034c NC_008596.1 Mycobrowser_v3 CDS 2417887 2418912 . + 0 MSMEG_2337 fni isopentenyl-diphosphate delta-isomerase, type 2 identified by match to protein family HMM TIGR02151 A0QRB5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2418945 2419571 . + 0 MSMEG_2338 MSMEG_2338 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QRB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2419579 2420901 . - 0 MSMEG_2339 MSMEG_2339 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2420692 2421201 . + 0 MSMEG_2340 MSMEG_2340 hypothetical protein identified by Glimmer2; putative A0QUU7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2421207 2422448 . + 0 MSMEG_2342 MSMEG_2342 putative glycosyltransferase identified by match to protein family HMM PF00201; match to protein family HMM PF03033; match to protein family HMM TIGR01426 A0QUU8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2422408 2422818 . - 0 MSMEG_2341 MSMEG_2341 conserved hypothetical protein A0QUU9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2422826 2423842 . - 0 MSMEG_2343 MSMEG_2343 methylesterase identified by match to protein family HMM PF00355 A0QUV0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2423839 2425356 . - 0 MSMEG_2344 MSMEG_2344 dehydrogenase identified by match to protein family HMM PF01266; match to protein family HMM PF01593 A0QUV1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2426030 2426977 . - 0 MSMEG_2346 MSMEG_2346 phytoene synthase identified by match to protein family HMM PF00494 A0QUV2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2426974 2428527 . - 0 MSMEG_2347 MSMEG_2347 phytoene dehydrogenase identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734 A0QUV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2430027 2431571 . - 0 MSMEG_2349 MSMEG_2349 glycosyl hydrolase, family protein 57 identified by match to protein family HMM PF03065 A0QUV4 No unknown Rv3031 Rv3031 NC_008596.1 Mycobrowser_v3 CDS 2431568 2432341 . - 0 MSMEG_2350 MSMEG_2350 conserved hypothetical protein A0QUV5 No unknown Rv3030 Rv3030 NC_008596.1 Mycobrowser_v3 CDS 2432570 2433361 . + 0 MSMEG_2351 etfB electron transfer flavoprotein, beta subunit identified by similarity to SP:O85691; match to protein family HMM PF01012 A0QUV6 No unknown Rv3029c Rv3029c NC_008596.1 Mycobrowser_v3 CDS 2433444 2434385 . + 0 MSMEG_2352 etfA electron transfer flavoprotein, alpha subunit identified by similarity to SP:P38974; match to protein family HMM PF00766; match to protein family HMM PF01012 A0QUV7 No unknown Rv3028c Rv3028c NC_008596.1 Mycobrowser_v3 CDS 2434550 2435293 . + 0 MSMEG_2353 MSMEG_2353 secreted protein identified by match to protein family HMM PF01113; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368 A0QUV8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2435295 2435942 . + 0 MSMEG_2354 MSMEG_2354 oxidoreductase identified by match to protein family HMM PF00881 A0QUV9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2436064 2436912 . + 0 MSMEG_2355 MSMEG_2355 conserved hypothetical protein A0QUW0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2436909 2437739 . + 0 MSMEG_2356 MSMEG_2356 acyltransferase identified by match to protein family HMM PF01553 A0QUW1 No unknown Rv3026c Rv3026c NC_008596.1 Mycobrowser_v3 CDS 2437787 2438995 . + 0 MSMEG_2357 MSMEG_2357 cysteine desulfurase identified by match to protein family HMM PF00266; match to protein family HMM PF01212 A0QUW2 No unknown Rv3025c Rv3025c NC_008596.1 Mycobrowser_v3 CDS 2440088 2441098 . + 0 MSMEG_2359 MSMEG_2359 methionine synthase, vitamin-B12 independent identified by match to protein family HMM PF01717 A0QUW4 No unknown Rv3015c Rv3015c NC_008596.1 Mycobrowser_v3 CDS 2456125 2456637 . + 0 MSMEG_2373 ilvN acetolactate synthase, small subunit identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119 A0QUX7 No unknown Rv3002c Rv3002c NC_008596.1 Mycobrowser_v3 CDS 2441100 2442674 . - 0 MSMEG_2360 MSMEG_2360 4-coumarate:CoA ligase identified by match to protein family HMM PF00501 A0QUW5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2442671 2443087 . - 0 MSMEG_2361 MSMEG_2361 phosphoribosylglycinamide formyltransferase A0QUW6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2458912 2460336 . - 0 MSMEG_2377 MSMEG_2377 P49 protein A0QUY1 No unknown Rv2997 Rv2997 NC_008596.1 Mycobrowser_v3 CDS 2443172 2445277 . + 0 MSMEG_2362 ligA DNA ligase, NAD-dependent identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 A0QUW7 No unknown Rv3014c Rv3014c NC_008596.1 Mycobrowser_v3 CDS 2445348 2446007 . - 0 MSMEG_2363 MSMEG_2363 amino acid-binding ACT identified by match to protein family HMM PF01842 A0QUW8 No unknown Rv3013 Rv3013 NC_008596.1 Mycobrowser_v3 CDS 2446108 2446407 . + 0 MSMEG_2364 gatC glutamyl-tRNA(Gln) amidotransferase, C subunit identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135 A0QUW9 No unknown Rv3012c Rv3012c NC_008596.1 Mycobrowser_v3 CDS 2446404 2447888 . + 0 MSMEG_2365 MSMEG_2365 glutamyl-tRNA(Gln) amidotransferase subunit A identified by match to protein family HMM PF01425; match to protein family HMM TIGR00132 A0QUX0 No unknown Rv3011c Rv3011c NC_008596.1 Mycobrowser_v3 CDS 2449026 2450537 . + 0 MSMEG_2367 MSMEG_2367 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B identified by match to protein family HMM PF01162; match to protein family HMM PF02637; match to protein family HMM PF02934; match to protein family HMM TIGR00133 A0QUX1 No unknown Rv3009c Rv3009c NC_008596.1 Mycobrowser_v3 CDS 2450596 2451234 . - 0 MSMEG_2368 MSMEG_2368 transcriptional regulator, TetR family protein domain protein, putative identified by match to protein family HMM PF00440 A0QUX2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2451352 2452446 . - 0 MSMEG_2369 MSMEG_2369 LppZ protein A0QUX3 No unknown Rv3006 Rv3006 NC_008596.1 Mycobrowser_v3 CDS 2452620 2453462 . + 0 MSMEG_2370 MSMEG_2370 DoxX subfamily protein, putative identified by match to protein family HMM PF07681 A0QUX4 No unknown Rv3005c Rv3005c NC_008596.1 Mycobrowser_v3 CDS 2453493 2453882 . - 0 MSMEG_2371 MSMEG_2371 Low molecular weight protein antigen 6 A0QUX5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2454205 2456061 . + 0 MSMEG_2372 ilvB acetolactate synthase, large subunit, biosynthetic type identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118 A0QUX6 No unknown Rv3003c Rv3003c NC_008596.1 Mycobrowser_v3 CDS 2456694 2457707 . + 0 MSMEG_2374 ilvC ketol-acid reductoisomerase identified by match to protein family HMM PF01450; match to protein family HMM PF07991; match to protein family HMM TIGR00465 A0QUX8 No unknown Rv3001c Rv3001c NC_008596.1 Mycobrowser_v3 CDS 2457779 2458390 . - 0 MSMEG_2375 wrbA NAD(P)H:quinone oxidoreductase, type IV identified by match to protein family HMM PF00258; match to protein family HMM PF03358; match to protein family HMM TIGR01755 A0QUX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2476113 2477108 . + 0 MSMEG_2393 gpsA NAD-dependent glycerol-3-phosphate dehydrogenase identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF07479 A0QUZ5 No unknown Rv2982c Rv2982c NC_008596.1 Mycobrowser_v3 CDS 2460414 2462000 . + 0 MSMEG_2378 serA D-3-phosphoglycerate dehydrogenase identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM TIGR01327 A0QUY2 No unknown Rv2996c Rv2996c NC_008596.1 Mycobrowser_v3 CDS 2461997 2463019 . + 0 MSMEG_2379 leuB 3-isopropylmalate dehydrogenase identified by similarity to SP:P95313; match to protein family HMM PF00180 A0QUY3 No unknown Rv2995c Rv2995c NC_008596.1 Mycobrowser_v3 CDS 2463113 2464348 . - 0 MSMEG_2380 MSMEG_2380 sugar transporter family protein identified by match to protein family HMM PF07690 A0QUY4 No unknown Rv2994 Rv2994 NC_008596.1 Mycobrowser_v3 CDS 2464399 2465580 . + 0 MSMEG_2381 MSMEG_2381 conserved hypothetical protein A0QUY5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2465631 2466410 . + 0 MSMEG_2382 MSMEG_2382 5-carboxymethyl-2-hydroxymuconate delta-isomerase identified by match to protein family HMM PF01557 A0QUY6 No unknown Rv2993c Rv2993c NC_008596.1 Mycobrowser_v3 CDS 2466407 2467867 . + 0 MSMEG_2383 gltX glutamyl-tRNA synthetase identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464 A0QUY7 No unknown Rv2992c Rv2992c NC_008596.1 Mycobrowser_v3 CDS 2468381 2469082 . - 0 MSMEG_2386 MSMEG_2386 transcriptional regulator, IclR family protein identified by match to protein family HMM PF01614 A0QUY8 No unknown Rv2989 Rv2989 NC_008596.1 Mycobrowser_v3 tRNA 2468127 2468202 . + 0 MSMEG_2385 MSMEG_2385 tRNA-Glu No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 2469194 2470648 . + 0 MSMEG_2387 leuC 3-isopropylmalate dehydratase, large subunit identified by match to protein family HMM PF00330; match to protein family HMM TIGR00170 A0QUY9 No unknown Rv2988c Rv2988c NC_008596.1 Mycobrowser_v3 CDS 2470672 2471265 . + 0 MSMEG_2388 leuD 3-isopropylmalate dehydratase, small subunit identified by match to protein family HMM PF00694; match to protein family HMM TIGR00171 A0QUZ0 No unknown Rv2987c Rv2987c NC_008596.1 Mycobrowser_v3 CDS 2472156 2473124 . - 0 MSMEG_2390 MSMEG_2390 hydrolase, NUDIX family protein identified by match to protein family HMM PF00293; match to protein family HMM PF00300 A0QUZ2 No unknown Rv2985 Rv2985 NC_008596.1 Mycobrowser_v3 CDS 2502168 2502587 . + 0 MSMEG_2421 MSMEG_2421 conserved hypothetical protein identified by match to protein family HMM PF02566 A0QV23 No unknown Rv2923c Rv2923c NC_008596.1 Mycobrowser_v3 CDS 2502584 2502880 . + 0 MSMEG_2422 MSMEG_2422 acylphosphatase identified by match to protein family HMM PF00708 A0QV24 No unknown Rv2922A Rv2922A NC_008596.1 Mycobrowser_v3 CDS 2473142 2475352 . - 0 MSMEG_2391 ppk polyphosphate kinase identified by match to protein family HMM PF02503 A0QUZ3 No unknown Rv2984 Rv2984 NC_008596.1 Mycobrowser_v3 CDS 2475381 2476046 . - 0 MSMEG_2392 MSMEG_2392 conserved hypothetical protein identified by match to protein family HMM PF01983 A0QUZ4 No unknown Rv2983 Rv2983 NC_008596.1 Mycobrowser_v3 CDS 2477113 2478222 . + 0 MSMEG_2394 MSMEG_2394 putative cystathionine gamma-synthase identified by match to protein family HMM PF01053 A0QUZ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2478371 2479492 . + 0 MSMEG_2395 MSMEG_2395 D-alanine--D-alanine ligase identified by match to protein family HMM PF01820; match to protein family HMM PF02222; match to protein family HMM PF02655; match to protein family HMM PF07478; match to protein family HMM TIGR01205 A0QUZ7 No unknown Rv2981c Rv2981c NC_008596.1 Mycobrowser_v3 CDS 2479493 2480080 . - 0 MSMEG_2396 MSMEG_2396 conserved hypothetical protein A0QUZ8 No unknown Rv2980 Rv2980 NC_008596.1 Mycobrowser_v3 CDS 2480097 2480333 . - 0 MSMEG_2397 MSMEG_2397 transcriptional regulatory protein, AsnC family protein identified by match to protein family HMM PF01037 A0QUZ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2480440 2481453 . + 0 MSMEG_2398 thiL thiamine-monophosphate kinase identified by match to protein family HMM PF02769; match to protein family HMM TIGR01379 A0QV00 No unknown Rv2977c Rv2977c NC_008596.1 Mycobrowser_v3 CDS 2481480 2482163 . + 0 MSMEG_2399 ung uracil-DNA glycosylase identified by match to protein family HMM PF03167; match to protein family HMM TIGR00628 A0QV01 No unknown Rv2976c Rv2976c NC_008596.1 Mycobrowser_v3 CDS 2482174 2482803 . + 0 MSMEG_2401 MSMEG_2401 hypothetical protein identified by Glimmer2; putative A0QV02 No unknown NC_008596.1 Mycobrowser_v3 CDS 2482555 2482749 . - 0 MSMEG_2400 rpmB ribosomal protein L28 identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009 A0QV03 No unknown NC_008596.1 Mycobrowser_v3 CDS 2482984 2484648 . + 0 MSMEG_2402 MSMEG_2402 dihydroxyacetone kinase identified by match to protein family HMM PF02734 A0QV04 No unknown Rv2974c Rv2974c NC_008596.1 Mycobrowser_v3 CDS 2497580 2498158 . + 0 MSMEG_2415 MSMEG_2415 hemerythrin HHE cation binding region identified by match to protein family HMM PF01814 A0QV17 No unknown NC_008596.1 Mycobrowser_v3 CDS 2498281 2499018 . + 0 MSMEG_2416 MSMEG_2416 conserved hypothetical protein A0QV18 No unknown Rv2927c Rv2927c NC_008596.1 Mycobrowser_v3 CDS 2516150 2517226 . + 0 MSMEG_2431 MSMEG_2431 amidohydrolase 3 identified by match to protein family HMM PF01979 A0QV33 No unknown NC_008596.1 Mycobrowser_v3 CDS 2722400 2723158 . - 0 MSMEG_2641 MSMEG_2641 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QVP0 No unknown Rv2831 Rv2831 NC_008596.1 Mycobrowser_v3 CDS 2484645 2486906 . + 0 MSMEG_2403 recG ATP-dependent DNA helicase RecG identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM TIGR00643 A0QV05 No unknown Rv2973c Rv2973c NC_008596.1 Mycobrowser_v3 CDS 2486903 2487607 . + 0 MSMEG_2404 MSMEG_2404 extracellular deoxyribonuclease A0QV06 No unknown Rv2972c Rv2972c NC_008596.1 Mycobrowser_v3 CDS 2487622 2488116 . - 0 MSMEG_2405 MSMEG_2405 MarR-family protein transcriptional regulator identified by match to protein family HMM PF00583 A0QV07 No unknown NC_008596.1 Mycobrowser_v3 CDS 2488188 2488766 . + 0 MSMEG_2406 MSMEG_2406 transcriptional regulator, TetR family protein, putative identified by match to protein family HMM PF00440 A0QV08 No unknown NC_008596.1 Mycobrowser_v3 CDS 573276 574849 . - 0 MSMEG_0495 MSMEG_0495 glycerol dehydratase reactivase chain A, ; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2488797 2489648 . - 0 MSMEG_2407 MSMEG_2407 morphine 6-dehydrogenase identified by match to protein family HMM PF00248 A0QV09 No unknown Rv2971 Rv2971 NC_008596.1 Mycobrowser_v3 CDS 2489654 2490481 . - 0 MSMEG_2408 MSMEG_2408 2,5-diketo-D-gluconic acid reductase A identified by match to protein family HMM PF00248 A0QV10 No unknown NC_008596.1 Mycobrowser_v3 CDS 2490579 2491631 . + 0 MSMEG_2409 MSMEG_2409 alpha/beta hydrolase fold family protein identified by match to protein family HMM PF07859 A0QV11 No unknown Rv2970c Rv2970c NC_008596.1 Mycobrowser_v3 CDS 2491665 2492393 . + 0 MSMEG_2410 MSMEG_2410 putative serine-threonine protein kinase A0QV12 No unknown Rv2969c Rv2969c NC_008596.1 Mycobrowser_v3 CDS 2492393 2493025 . + 0 MSMEG_2411 MSMEG_2411 conserved integral membrane protein identified by match to protein family HMM PF07884 A0QV13 No unknown Rv2968c Rv2968c NC_008596.1 Mycobrowser_v3 CDS 2496486 2496995 . + 0 MSMEG_2413 MSMEG_2413 putative methyltransferase identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095 A0QV15 No unknown Rv2966c Rv2966c NC_008596.1 Mycobrowser_v3 CDS 2497021 2497497 . + 0 MSMEG_2414 coaD pantetheine-phosphate adenylyltransferase identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510 A0QV16 No unknown Rv2965c Rv2965c NC_008596.1 Mycobrowser_v3 CDS 3453339 3453689 . + 0 MSMEG_3382 MSMEG_3382 transcriptional regulator, ArsR family protein identified by match to protein family HMM PF01022 A0QXQ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2499088 2499699 . + 0 MSMEG_2417 MSMEG_2417 conserved hypothetical protein identified by match to protein family HMM PF02620 A0QV19 No unknown Rv2926c Rv2926c NC_008596.1 Mycobrowser_v3 CDS 2499696 2500388 . + 0 MSMEG_2418 rnc ribonuclease III identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 A0QV20 No unknown Rv2925c Rv2925c NC_008596.1 Mycobrowser_v3 CDS 2501271 2502047 . - 0 MSMEG_2420 MSMEG_2420 hypothetical protein identified by Glimmer2; putative A0QV22 No unknown NC_008596.1 Mycobrowser_v3 CDS 2502907 2506494 . + 0 MSMEG_2423 smc chromosome segregation protein SMC identified by match to protein family HMM PF02463; match to protein family HMM PF06470; match to protein family HMM TIGR02168 A0QV25 No unknown Rv2922c Rv2922c NC_008596.1 Mycobrowser_v3 CDS 2521737 2522681 . - 0 MSMEG_2439 MSMEG_2439 LppW protein A0QV41 No unknown Rv2905 Rv2905 NC_008596.1 Mycobrowser_v3 CDS 6658820 6659215 . - 0 MSMEG_6603 MSMEG_6603 NADH:flavin oxidoreductase/nadh oxidase A0R6M6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2506567 2508042 . + 0 MSMEG_2424 ftsY signal recognition particle-docking protein FtsY identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064 A0QV26 No unknown Rv2921c Rv2921c NC_008596.1 Mycobrowser_v3 CDS 2508282 2509631 . + 0 MSMEG_2425 amt ammonium transporter identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 A0QV27 No unknown Rv2920c Rv2920c NC_008596.1 Mycobrowser_v3 CDS 2509665 2510003 . + 0 MSMEG_2426 MSMEG_2426 nitrogen regulatory protein P-II identified by match to protein family HMM PF00543 A0QV28 No unknown Rv2919c Rv2919c NC_008596.1 Mycobrowser_v3 CDS 2510091 2512565 . + 0 MSMEG_2427 glnD protein-P-II uridylyltransferase identified by similarity to SP:P27249; match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM TIGR01693 A0QV29 No unknown Rv2918c Rv2918c NC_008596.1 Mycobrowser_v3 CDS 2512566 2513411 . - 0 MSMEG_2428 MSMEG_2428 DNA-binding protein A0QV30 No unknown NC_008596.1 Mycobrowser_v3 CDS 2513512 2514516 . + 0 MSMEG_2429 MSMEG_2429 aldo/keto reductase identified by match to protein family HMM PF00248 A0QV31 No unknown NC_008596.1 Mycobrowser_v3 CDS 2543310 2544191 . + 0 MSMEG_2463 MSMEG_2463 nicotine dehydrogenase chain A identified by match to protein family HMM PF00941 A0QV65 No unknown NC_008596.1 Mycobrowser_v3 CDS 2514582 2516150 . + 0 MSMEG_2430 ffh signal recognition particle protein identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959 A0QV32 No unknown Rv2916c Rv2916c NC_008596.1 Mycobrowser_v3 CDS 2533824 2534033 . + 0 MSMEG_2452 MSMEG_2452 hypothetical protein identified by Glimmer2; putative A0QV54 No unknown NC_008596.1 Mycobrowser_v3 CDS 2517308 2518135 . - 0 MSMEG_2432 MSMEG_2432 D-alanyl-D-alanine carboxypeptidase identified by match to protein family HMM PF00768 A0QV34 No unknown NC_008596.1 Mycobrowser_v3 CDS 2518205 2519095 . - 0 MSMEG_2433 MSMEG_2433 D-alanyl-D-alanine carboxypeptidase identified by match to protein family HMM PF00768 A0QV35 No unknown Rv2911 Rv2911 NC_008596.1 Mycobrowser_v3 CDS 2520523 2521044 . + 0 MSMEG_2437 rimM 16S rRNA processing protein RimM identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273 A0QV39 No unknown Rv2907c Rv2907c NC_008596.1 Mycobrowser_v3 CDS 2521059 2521736 . + 0 MSMEG_2438 trmD tRNA (guanine-N1)-methyltransferase identified by match to protein family HMM PF01746; match to protein family HMM TIGR00088 A0QV40 No unknown Rv2906c Rv2906c NC_008596.1 Mycobrowser_v3 CDS 2523424 2524293 . + 0 MSMEG_2441 lepB signal peptidase I identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227 A0QV43 No unknown Rv2903c Rv2903c NC_008596.1 Mycobrowser_v3 CDS 2524304 2525122 . + 0 MSMEG_2442 MSMEG_2442 ribonuclease HII identified by match to protein family HMM PF01351 A0QV44 No unknown Rv2902c Rv2902c NC_008596.1 Mycobrowser_v3 CDS 2525199 2525504 . + 0 MSMEG_2443 MSMEG_2443 conserved hypothetical protein A0QV45 No unknown Rv2901c Rv2901c NC_008596.1 Mycobrowser_v3 CDS 2525519 2526229 . - 0 MSMEG_2444 MSMEG_2444 dienelactone hydrolase family protein identified by match to protein family HMM PF01738 A0QV46 No unknown Rv2054 Rv2054 NC_008596.1 Mycobrowser_v3 CDS 2526276 2527730 . - 0 MSMEG_2445 MSMEG_2445 conserved hypothetical protein identified by match to protein family HMM PF02696 A0QV47 No unknown NC_008596.1 Mycobrowser_v3 CDS 2527780 2528202 . - 0 MSMEG_2446 MSMEG_2446 conserved hypothetical protein A0QV48 No unknown NC_008596.1 Mycobrowser_v3 CDS 2528276 2529892 . - 0 MSMEG_2447 MSMEG_2447 regulatory protein identified by match to protein family HMM PF07905 A0QV49 No unknown NC_008596.1 Mycobrowser_v3 CDS 2529889 2530023 . - 0 MSMEG_2448 MSMEG_2448 hypothetical protein identified by Glimmer2; putative A0QV50 No unknown NC_008596.1 Mycobrowser_v3 CDS 2530003 2531496 . + 0 MSMEG_2449 mmsA methylmalonate-semialdehyde dehydrogenase identified by match to protein family HMM PF00171; match to protein family HMM TIGR01722 A0QV51 No unknown NC_008596.1 Mycobrowser_v3 CDS 2531510 2532895 . + 0 MSMEG_2450 MSMEG_2450 adenosylmethionine--8-amino-7-oxononanoate transaminase identified by match to protein family HMM PF00202 A0QV52 No unknown NC_008596.1 Mycobrowser_v3 CDS 2533009 2533785 . + 0 MSMEG_2451 MSMEG_2451 HAD-superfamily protein hydrolase, subfamily protein IIA identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460 A0QV53 No unknown NC_008596.1 Mycobrowser_v3 CDS 2534312 2535046 . + 0 MSMEG_2453 MSMEG_2453 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QV55 No unknown NC_008596.1 Mycobrowser_v3 CDS 2535043 2535504 . + 0 MSMEG_2454 MSMEG_2454 translation initiation inhibitor identified by match to protein family HMM PF01042 A0QV56 No unknown NC_008596.1 Mycobrowser_v3 CDS 2535507 2536103 . - 0 MSMEG_2455 MSMEG_2455 carbon monoxide dehydrogenase subunit G (CoxG) superfamily protein identified by match to protein family HMM PF06240 A0QV57 No unknown NC_008596.1 Mycobrowser_v3 CDS 2536199 2537197 . + 0 MSMEG_2456 MSMEG_2456 5,10-methylenetetrahydromethanopterin reductase identified by match to protein family HMM PF00296 A0QV58 No unknown NC_008596.1 Mycobrowser_v3 CDS 2537542 2538522 . + 0 MSMEG_2458 MSMEG_2458 hypothetical protein identified by Glimmer2; putative A0QV60 No unknown NC_008596.1 Mycobrowser_v3 CDS 2538553 2539353 . + 0 MSMEG_2459 MSMEG_2459 transporter ATPase identified by match to protein family HMM PF00005 A0QV61 No unknown NC_008596.1 Mycobrowser_v3 CDS 2539350 2540198 . + 0 MSMEG_2460 MSMEG_2460 transporter permease 1 identified by match to protein family HMM PF00528 A0QV62 No unknown NC_008596.1 Mycobrowser_v3 CDS 2540195 2540983 . + 0 MSMEG_2461 MSMEG_2461 transporter permease 2, putative identified by match to protein family HMM PF00528 A0QV63 No unknown NC_008596.1 Mycobrowser_v3 CDS 2540980 2543313 . + 0 MSMEG_2462 MSMEG_2462 carbon-monoxide dehydrogenase identified by match to protein family HMM PF01315; match to protein family HMM PF02738 A0QV64 No unknown NC_008596.1 Mycobrowser_v3 CDS 2560435 2560866 . - 0 MSMEG_2476 MSMEG_2476 MarR family protein transcriptional regulatory protein identified by match to protein family HMM PF01047 A0QV77 No unknown NC_008596.1 Mycobrowser_v3 CDS 2544178 2544684 . + 0 MSMEG_2464 MSMEG_2464 [2Fe-2S] binding domain protein identified by match to protein family HMM PF00111; match to protein family HMM PF01799 A0QV66 No unknown NC_008596.1 Mycobrowser_v3 CDS 2544747 2545967 . + 0 MSMEG_2465 MSMEG_2465 adenine deaminase identified by match to protein family HMM PF01979; match to protein family HMM PF07969 A0QV67 No unknown NC_008596.1 Mycobrowser_v3 CDS 2546004 2547203 . + 0 MSMEG_2466 MSMEG_2466 glutaryl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QV68 No unknown NC_008596.1 Mycobrowser_v3 CDS 3662792 3663292 . + 0 MSMEG_3600 MSMEG_3600 hypothetical protein identified by Glimmer2; putative A0QYB4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2547242 2549401 . + 0 MSMEG_2467 MSMEG_2467 transketolase, central region identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780 A0QV69 No unknown NC_008596.1 Mycobrowser_v3 CDS 2549414 2550649 . + 0 MSMEG_2468 MSMEG_2468 L-carnitine dehydratase/bile acid-inducible protein F identified by match to protein family HMM PF02515 A0QV70 No unknown NC_008596.1 Mycobrowser_v3 CDS 2550646 2551455 . + 0 MSMEG_2470 MSMEG_2470 acyl-CoA thioesterase identified by match to protein family HMM PF02551 A0QV71 No unknown NC_008596.1 Mycobrowser_v3 CDS 1813034 1813573 . + 0 MSMEG_1718 MSMEG_1718 This gene is disrupted by an IS element.; IS3 family element, transposase orfB, interruption-N; identified by similarity to GP:15619023 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2551339 2553918 . - 0 MSMEG_2469 MSMEG_2469 AMP-dependent synthetase and ligase identified by match to protein family HMM PF00501; match to protein family HMM PF00550 A0QV72 No unknown NC_008596.1 Mycobrowser_v3 CDS 2554008 2556437 . - 0 MSMEG_2471 MSMEG_2471 pyruvate dehydrogenase alpha subunit identified by match to protein family HMM PF02779; match to protein family HMM PF02780 A0QV73 No unknown NC_008596.1 Mycobrowser_v3 CDS 2556536 2557012 . + 0 MSMEG_2472 MSMEG_2472 AsnC-family protein transcriptional regulator identified by match to protein family HMM PF01037 A0QV74 No unknown NC_008596.1 Mycobrowser_v3 CDS 2558654 2559433 . + 0 MSMEG_2474 MSMEG_2474 probable cutinase Cut3 identified by match to protein family HMM PF01083; match to protein family HMM PF02230 A0QV75 No unknown Rv1758 Rv1758 NC_008596.1 Mycobrowser_v3 CDS 2559495 2560349 . - 0 MSMEG_2475 MSMEG_2475 putative oxidoreductase YdbC identified by match to protein family HMM PF00248 A0QV76 No unknown NC_008596.1 Mycobrowser_v3 CDS 2560939 2562006 . - 0 MSMEG_2477 MSMEG_2477 cyclopentanol dehydrogenase identified by match to protein family HMM PF00106 A0QV78 No unknown NC_008596.1 Mycobrowser_v3 CDS 2562032 2562889 . - 0 MSMEG_2478 MSMEG_2478 fumarylacetoacetate hydrolase family protein identified by match to protein family HMM PF01557 A0QV79 No unknown NC_008596.1 Mycobrowser_v3 CDS 2562764 2562925 . + 0 MSMEG_2479 MSMEG_2479 hypothetical protein identified by Glimmer2; putative A0QV80 No unknown NC_008596.1 Mycobrowser_v3 CDS 2779578 2780315 . - 0 MSMEG_2707 MSMEG_2707 hypothetical protein identified by Glimmer2; putative A0QVV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2562958 2563698 . + 0 MSMEG_2480 MSMEG_2480 transcriptional regulator, GntR family protein, putative identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QV81 No unknown NC_008596.1 Mycobrowser_v3 CDS 2563709 2564953 . + 0 MSMEG_2481 MSMEG_2481 conserved hypothetical protein A0QV82 No unknown NC_008596.1 Mycobrowser_v3 CDS 2565001 2565369 . + 0 MSMEG_2482 MSMEG_2482 hypothetical protein identified by Glimmer2; putative A0QV83 No unknown NC_008596.1 Mycobrowser_v3 CDS 2565362 2566084 . + 0 MSMEG_2483 MSMEG_2483 transcriptional regulator, IclR family protein identified by match to protein family HMM PF01614 A0QV84 No unknown Rv1773c Rv1773c NC_008596.1 Mycobrowser_v3 CDS 2566112 2566801 . - 0 MSMEG_2484 MSMEG_2484 conserved hypothetical protein A0QV85 No unknown Rv1775 Rv1775 NC_008596.1 Mycobrowser_v3 CDS 600745 601814 . - 0 MSMEG_0521 MSMEG_0521 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2566837 2568444 . - 0 MSMEG_2485 MSMEG_2485 monooxygenase, FAD-binding identified by match to protein family HMM PF01494 A0QV86 No unknown NC_008596.1 Mycobrowser_v3 CDS 2568753 2570159 . + 0 MSMEG_2486 MSMEG_2486 major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QV87 No unknown NC_008596.1 Mycobrowser_v3 CDS 2570219 2571472 . - 0 MSMEG_2487 MSMEG_2487 4-aminobutyrate aminotransferase identified by match to protein family HMM PF00202 A0QV88 No unknown NC_008596.1 Mycobrowser_v3 CDS 2571561 2573021 . + 0 MSMEG_2488 MSMEG_2488 [NADP+] succinate-semialdehyde dehydrogenase identified by match to protein family HMM PF00171 A0QV89 No unknown NC_008596.1 Mycobrowser_v3 CDS 2573037 2573759 . - 0 MSMEG_2489 MSMEG_2489 transcriptional regulator, GntR family protein, putative identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QV90 No unknown NC_008596.1 Mycobrowser_v3 CDS 2573756 2574385 . - 0 MSMEG_2490 MSMEG_2490 decarboxylase identified by match to protein family HMM PF01177 A0QV91 No unknown NC_008596.1 Mycobrowser_v3 CDS 2574544 2577402 . + 0 MSMEG_2492 MSMEG_2492 D-lactate dehydrogenase identified by match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913 A0QV92 No unknown NC_008596.1 Mycobrowser_v3 CDS 2591193 2592062 . - 0 MSMEG_2506 MSMEG_2506 carboxyvinyl-carboxyphosphonate phosphorylmutase A0QVA7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2577399 2578571 . - 0 MSMEG_2491 MSMEG_2491 acetylornithine deacetylase identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910 A0QV93 No unknown NC_008596.1 Mycobrowser_v3 CDS 2578576 2579775 . - 0 MSMEG_2493 MSMEG_2493 aminotransferase, class I and II family protein identified by match to protein family HMM PF00155 A0QV94 No unknown NC_008596.1 Mycobrowser_v3 CDS 2579779 2580945 . - 0 MSMEG_2494 MSMEG_2494 Xaa-Pro aminopeptidase identified by match to protein family HMM PF00557 A0QV95 No unknown NC_008596.1 Mycobrowser_v3 CDS 2580942 2581646 . - 0 MSMEG_2495 MSMEG_2495 decarboxylase identified by match to protein family HMM PF01177 A0QV96 No unknown NC_008596.1 Mycobrowser_v3 CDS 2581723 2582772 . + 0 MSMEG_2496 MSMEG_2496 NAD-binding protein identified by match to protein family HMM PF00389; match to protein family HMM PF02826 A0QV97 No unknown NC_008596.1 Mycobrowser_v3 CDS 2582769 2584172 . + 0 MSMEG_2497 MSMEG_2497 amidase family protein identified by match to protein family HMM PF01425 A0QV98 No unknown NC_008596.1 Mycobrowser_v3 CDS 2584169 2584669 . + 0 MSMEG_2498 MSMEG_2498 conserved hypothetical protein A0QV99 No unknown NC_008596.1 Mycobrowser_v3 CDS 2584688 2585911 . + 0 MSMEG_2500 MSMEG_2500 conserved hypothetical protein A0QVA0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2585908 2586690 . - 0 MSMEG_2499 MSMEG_2499 ABC transporter, membrane spanning protein, putative identified by match to protein family HMM PF00528 A0QVA1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2586687 2587553 . - 0 MSMEG_2501 MSMEG_2501 ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit identified by match to protein family HMM PF00528 A0QVA2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2587550 2588344 . - 0 MSMEG_2502 MSMEG_2502 transporter ATPase identified by match to protein family HMM PF00005 A0QVA3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2588395 2589414 . - 0 MSMEG_2503 MSMEG_2503 hypothetical protein identified by Glimmer2; putative A0QVA4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2589424 2589951 . - 0 MSMEG_2504 MSMEG_2504 3-isopropylmalate dehydratase small subunit identified by match to protein family HMM TIGR02087 A0QVA5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2589951 2591192 . - 0 MSMEG_2505 MSMEG_2505 3-isopropylmalate dehydratase large subunit identified by match to protein family HMM PF00330 A0QVA6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2592063 2592839 . - 0 MSMEG_2507 MSMEG_2507 IclR-family protein transcriptional regulator identified by match to protein family HMM PF01614 A0QVA8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2593267 2593641 . + 0 MSMEG_2508 MSMEG_2508 conserved hypothetical protein identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252 A0QVA9 No unknown Rv2898c Rv2898c NC_008596.1 Mycobrowser_v3 CDS 2593697 2595151 . + 0 MSMEG_2509 MSMEG_2509 Mg-chelatase subunits D/I family protein, ComM subfamily protein identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368 A0QVB0 No unknown Rv2897c Rv2897c NC_008596.1 Mycobrowser_v3 CDS 2596370 2597242 . + 0 MSMEG_2511 MSMEG_2511 siderophore utilization protein identified by match to protein family HMM PF04954; match to protein family HMM PF08021 A0QVB1 No unknown Rv2895c Rv2895c NC_008596.1 Mycobrowser_v3 CDS 3986453 3986902 . - 0 MSMEG_3918 MSMEG_3918 hypothetical protein identified by Glimmer2; putative A0QZ69 No unknown NC_008596.1 Mycobrowser_v3 CDS 2597267 2598430 . + 0 MSMEG_2512 MSMEG_2512 lactate 2-monooxygenase identified by match to protein family HMM PF01070 A0QVB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2598528 2599364 . + 0 MSMEG_2513 MSMEG_2513 hypothetical protein identified by Glimmer2; putative A0QVB3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2601428 2602330 . + 0 MSMEG_2515 xerC tyrosine recombinase XerC identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02224 A0QVB4 No unknown Rv2894c Rv2894c NC_008596.1 Mycobrowser_v3 CDS 2602327 2603208 . + 0 MSMEG_2517 MSMEG_2517 hydrolase, alpha/beta fold family protein, putative identified by match to protein family HMM PF00561 A0QVB5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2603192 2604121 . - 0 MSMEG_2516 MSMEG_2516 putative oxidoreductase identified by match to protein family HMM PF00296 A0QVB6 No unknown Rv2893 Rv2893 NC_008596.1 Mycobrowser_v3 CDS 2604148 2604666 . - 0 MSMEG_2518 MSMEG_2518 peptidase M23B identified by match to protein family HMM PF01551 A0QVB7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2604918 2605793 . + 0 MSMEG_2519 rpsB ribosomal protein S2 identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011 A0QVB8 No unknown Rv2890c Rv2890c NC_008596.1 Mycobrowser_v3 CDS 2648881 2649663 . + 0 MSMEG_2565 MSMEG_2565 4-hydroxy-2-oxovalerate aldolase identified by match to protein family HMM PF03328 A0QVG4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2619436 2619741 . + 0 MSMEG_2533 MSMEG_2533 hypothetical protein identified by Glimmer2; putative A0QVD2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2605809 2606636 . + 0 MSMEG_2520 tsf translation elongation factor Ts identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116 A0QVB9 No unknown Rv2889c Rv2889c NC_008596.1 Mycobrowser_v3 CDS 2606795 2608255 . + 0 MSMEG_2521 MSMEG_2521 amidase identified by match to protein family HMM PF01425 A0QVC0 No unknown Rv2888c Rv2888c NC_008596.1 Mycobrowser_v3 CDS 2608371 2609555 . + 0 MSMEG_2522 MSMEG_2522 efflux ABC transporter, permease protein identified by match to protein family HMM PF02687 A0QVC1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2609552 2610118 . + 0 MSMEG_2523 MSMEG_2523 efflux ABC transporter, permease protein, putative identified by match to protein family HMM PF02687 A0QVC2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2610123 2610845 . + 0 MSMEG_2524 MSMEG_2524 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0QVC3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2610917 2612377 . + 0 MSMEG_2525 MSMEG_2525 amino acid permease superfamily protein identified by match to protein family HMM PF00324 A0QVC4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2793381 2793947 . + 0 MSMEG_2724 MSMEG_2724 regulatory protein RecX identified by match to protein family HMM PF02631 P94965 No unknown Rv2736c Rv2736c NC_008596.1 Mycobrowser_v3 CDS 2612646 2614619 . + 0 MSMEG_2526 MSMEG_2526 copper methylamine oxidase identified by match to protein family HMM PF01179; match to protein family HMM PF02727; match to protein family HMM PF02728 A0QVC5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2614912 2615016 . + 0 MSMEG_2527 MSMEG_2527 hypothetical protein identified by Glimmer2; putative A0QVC6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2615039 2616163 . - 0 MSMEG_2528 MSMEG_2528 glycerate kinase identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045 A0QVC7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2616171 2617124 . - 0 MSMEG_2529 MSMEG_2529 glyoxylate reductase identified by match to protein family HMM PF00389; match to protein family HMM PF02826 A0QVC8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2617182 2617610 . - 0 MSMEG_2530 pcaC 4-carboxymuconolactone decarboxylase domain protein identified by match to protein family HMM PF02627 A0QVC9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2617653 2618345 . - 0 MSMEG_2531 MSMEG_2531 GntR family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QVD0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2618774 2619349 . + 0 MSMEG_2532 aroQ dehydroquinase dehydratase, type II identified by match to protein family HMM PF01220 A0QVD1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2619738 2620601 . + 0 MSMEG_2534 MSMEG_2534 putative carboxylesterase protein identified by match to protein family HMM PF00561 A0QVD3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2620637 2621404 . + 0 MSMEG_2535 MSMEG_2535 dehydrogenase/reductase SDR family protein member 10 identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QVD4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2621453 2622208 . + 0 MSMEG_2536 MSMEG_2536 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106 A0QVD5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2622262 2623653 . + 0 MSMEG_2537 MSMEG_2537 transporter protein identified by match to protein family HMM PF07690 A0QVD6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2624131 2624811 . + 0 MSMEG_2539 MSMEG_2539 thiopurine S-methyltransferase (tpmt) superfamily protein identified by match to protein family HMM PF05724 A0QVD8 No unknown Rv0560c Rv0560c NC_008596.1 Mycobrowser_v3 CDS 2624947 2625693 . + 0 MSMEG_2540 pyrH uridylate kinase identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075 A0QVD9 No unknown Rv2883c Rv2883c NC_008596.1 Mycobrowser_v3 CDS 2625741 2626298 . + 0 MSMEG_2541 frr ribosome recycling factor identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496 A0QVE0 No unknown Rv2882c Rv2882c NC_008596.1 Mycobrowser_v3 CDS 2748751 2749500 . - 0 MSMEG_2669 MSMEG_2669 hydrolase identified by match to protein family HMM PF01738 A0QVR8 No unknown Rv2765 Rv2765 NC_008596.1 Mycobrowser_v3 CDS 2626299 2627177 . + 0 MSMEG_2543 cdsA phosphatidate cytidylyltransferase identified by match to protein family HMM PF01148 A0QVE1 No unknown Rv2881c Rv2881c NC_008596.1 Mycobrowser_v3 CDS 2627136 2628050 . - 0 MSMEG_2542 MSMEG_2542 integral membrane protein DUF6 identified by match to protein family HMM PF00892 A0QVE2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2628197 2629090 . + 0 MSMEG_2544 MSMEG_2544 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QVE3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2629087 2630205 . + 0 MSMEG_2545 MSMEG_2545 radical SAM enzyme, Cfr family protein identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048 A0QVE4 No unknown Rv2880c,Rv2879c Rv2880c,Rv2879c NC_008596.1 Mycobrowser_v3 CDS 2630288 2630989 . - 0 MSMEG_2546 MSMEG_2546 transcriptional Regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QVE5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2631062 2632063 . - 0 MSMEG_2547 MSMEG_2547 transcriptional regulator identified by match to protein family HMM PF04198 A0QVE6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2723196 2723471 . + 0 MSMEG_2642 MSMEG_2642 conserved hypothetical protein A0QVP1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2632377 2633153 . + 0 MSMEG_2548 MSMEG_2548 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QVE7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2633198 2634526 . + 0 MSMEG_2549 MSMEG_2549 major facilitator superfamily protein identified by match to protein family HMM PF07690 A0QVE8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3453838 3453984 . - 0 MSMEG_3383 MSMEG_3383 hypothetical protein identified by Glimmer2; putative A0QXQ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2634530 2635594 . + 0 MSMEG_2550 MSMEG_2550 glyoxylate reductase identified by match to protein family HMM PF00389; match to protein family HMM PF02826 A0QVE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2635629 2635754 . - 0 MSMEG_2551 MSMEG_2551 hypothetical protein identified by Glimmer2; putative A0QVF0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2635751 2637235 . - 0 MSMEG_2552 MSMEG_2552 aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 A0QVF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2637301 2637849 . - 0 MSMEG_2553 MSMEG_2553 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QVF2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2637892 2639031 . - 0 MSMEG_2554 MSMEG_2554 phosphotransferase enzyme family protein identified by match to protein family HMM PF01636 A0QVF3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2639368 2639781 . - 0 MSMEG_2555 MSMEG_2555 hypothetical protein identified by Glimmer2; putative A0QVF4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2780312 2780503 . - 0 MSMEG_2708 MSMEG_2708 hypothetical protein identified by Glimmer2; putative A0QVV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2639792 2642041 . - 0 MSMEG_2556 MSMEG_2556 beta-glucosidase identified by match to protein family HMM PF00933; match to protein family HMM PF01915 A0QVF5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2642079 2642627 . - 0 MSMEG_2557 MSMEG_2557 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QVF6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2642713 2643969 . + 0 MSMEG_2558 MSMEG_2558 NikQ protein identified by match to protein family HMM PF00067 A0QVF7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2643983 2644174 . + 0 MSMEG_2559 MSMEG_2559 conserved domain protein A0QVF8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2644175 2644993 . - 0 MSMEG_2560 MSMEG_2560 conserved hypothetical protein A0QVF9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2723468 2724031 . + 0 MSMEG_2643 MSMEG_2643 conserved hypothetical protein A0QVP2 No unknown Rv2825c,Rv2828c Rv2825c,Rv2828c NC_008596.1 Mycobrowser_v3 CDS 2645003 2645887 . - 0 MSMEG_2561 MSMEG_2561 gluconolactonase identified by match to protein family HMM PF03758 A0QVG0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2645963 2646667 . + 0 MSMEG_2562 MSMEG_2562 conserved hypothetical protein A0QVG1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2646676 2647914 . + 0 MSMEG_2563 MSMEG_2563 cytochrome P450 superfamily protein identified by match to protein family HMM PF00067 A0QVG2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2647916 2648884 . + 0 MSMEG_2564 MSMEG_2564 oxidoreductase, zinc-binding dehydrogenase family protein identified by match to protein family HMM PF00107 A0QVG3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3512255 3512413 . + 0 MSMEG_3443 MSMEG_3443 hypothetical protein identified by Glimmer2; putative A0QXV9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2649687 2650415 . + 0 MSMEG_2566 MSMEG_2566 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase identified by match to protein family HMM PF00106 A0QVG5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2650397 2651911 . + 0 MSMEG_2567 MSMEG_2567 probable monooxygenase A0QVG6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2651913 2652845 . + 0 MSMEG_2568 MSMEG_2568 LipW protein identified by match to protein family HMM PF07859 A0QVG7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2652955 2653929 . - 0 MSMEG_2569 MSMEG_2569 oxidoreductase, 2OG-Fe(II) oxygenase family protein identified by match to protein family HMM PF03171 A0QVG8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2679224 2679973 . + 0 MSMEG_2596 MSMEG_2596 peptidase C26 identified by match to protein family HMM PF00117; match to protein family HMM PF07722 A0QVJ5 No unknown Rv2859c Rv2859c NC_008596.1 Mycobrowser_v3 CDS 2780291 2780443 . + 0 MSMEG_2709 MSMEG_2709 hypothetical protein identified by Glimmer2; putative A0QVV4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2653937 2655358 . - 0 MSMEG_2570 MSMEG_2570 xanthine/uracil permease identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM TIGR00801 A0QVG9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2655727 2656023 . + 0 MSMEG_2571 MSMEG_2571 cupin 2, conserved barrel A0QVH0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2656031 2656504 . - 0 MSMEG_2572 MSMEG_2572 conserved hypothetical protein A0QVH1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2656525 2657232 . - 0 MSMEG_2573 MSMEG_2573 conserved hypothetical protein identified by match to protein family HMM PF04248 A0QVH2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2657470 2658036 . + 0 MSMEG_2574 MSMEG_2574 conserved hypothetical protein A0QVH3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2658074 2658328 . - 0 MSMEG_2575 MSMEG_2575 conserved hypothetical protein A0QVH4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2658411 2659769 . - 0 MSMEG_2576 MSMEG_2576 deoxyribodipyrimidine photo-lyase identified by match to protein family HMM PF00875; match to protein family HMM PF03441 A0QVH5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2659722 2659961 . + 0 MSMEG_2577 MSMEG_2577 hypothetical protein identified by Glimmer2; putative A0QVH6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2660026 2661222 . + 0 MSMEG_2578 dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase identified by match to protein family HMM PF02670; match to protein family HMM TIGR00243 A0QVH7 No unknown Rv2870c Rv2870c NC_008596.1 Mycobrowser_v3 CDS 2661219 2662439 . + 0 MSMEG_2579 MSMEG_2579 zinc metalloprotease identified by match to protein family HMM PF02163 A0QVH8 No unknown Rv2869c Rv2869c NC_008596.1 Mycobrowser_v3 CDS 2662456 2663622 . + 0 MSMEG_2580 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase identified by match to protein family HMM PF04551; match to protein family HMM TIGR00612 A0QVH9 No unknown Rv2868c Rv2868c NC_008596.1 Mycobrowser_v3 CDS 2832575 2833276 . - 0 MSMEG_2767 MSMEG_2767 conserved hypothetical protein A0QW10 No unknown Rv2695 Rv2695 NC_008596.1 Mycobrowser_v3 CDS 2663721 2664533 . + 0 MSMEG_2581 MSMEG_2581 acetyltransferase identified by match to protein family HMM PF00583 A0QVI0 No unknown Rv2867c Rv2867c NC_008596.1 Mycobrowser_v3 CDS 2664545 2665084 . - 0 MSMEG_2582 MSMEG_2582 conserved hypothetical protein A0QVI1 No unknown Rv1676 Rv1676 NC_008596.1 Mycobrowser_v3 CDS 2665175 2665783 . + 0 MSMEG_2583 MSMEG_2583 putative transcriptional regulator identified by match to protein family HMM PF00440; match to protein family HMM PF02909 A0QVI2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2679970 2681325 . + 0 MSMEG_2597 MSMEG_2597 aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0QVJ6 No unknown Rv2858c Rv2858c NC_008596.1 Mycobrowser_v3 CDS 712068 713446 . - 0 MSMEG_0631 MSMEG_0631 sulfatase family protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00884 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2665920 2667740 . + 0 MSMEG_2584 MSMEG_2584 penicillin-binding protein, putative identified by match to protein family HMM PF00905; match to protein family HMM PF05223 A0QVI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2667790 2668377 . + 0 MSMEG_2585 MSMEG_2585 conserved hypothetical protein identified by match to protein family HMM PF08044 A0QVI4 No unknown Rv2862c Rv2862c NC_008596.1 Mycobrowser_v3 CDS 2668397 2668783 . - 0 MSMEG_2586 MSMEG_2586 conserved hypothetical protein, putative identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369 A0QVI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2707937 2708785 . - 0 MSMEG_2627 MSMEG_2627 hypothetical protein identified by Glimmer2; putative A0QVM6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2668898 2669755 . + 0 MSMEG_2587 map methionine aminopeptidase, type I identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500 A0QVI6 No unknown Rv2861c Rv2861c NC_008596.1 Mycobrowser_v3 CDS 2669752 2671242 . + 0 MSMEG_2588 cobQ cobyric acid synthase CobQ identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00313 A0QVI7 No unknown Rv0255c Rv0255c NC_008596.1 Mycobrowser_v3 CDS 2671246 2671656 . - 0 MSMEG_2589 MSMEG_2589 conserved hypothetical protein A0QVI8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2671766 2672536 . + 0 MSMEG_2590 MSMEG_2590 AraC-family protein transcriptional regulator identified by match to protein family HMM PF00165; match to protein family HMM PF02311 A0QVI9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2672585 2673241 . + 0 MSMEG_2591 MSMEG_2591 hypothetical protein identified by Glimmer2; putative A0QVJ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2673315 2673878 . + 0 MSMEG_2592 MSMEG_2592 conserved hypothetical protein A0QVJ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2673880 2675709 . - 0 MSMEG_2593 MSMEG_2593 gnat-family protein acetyltransferase identified by match to protein family HMM PF00583; match to protein family HMM TIGR03103 A0QVJ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2688950 2689729 . + 0 MSMEG_2609 cbiQ cobalt ABC transporter, permease protein CbiQ identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454 A0QVK8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2675706 2677511 . - 0 MSMEG_2594 asnB asparagine synthase (glutamine-hydrolyzing) identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; match to protein family HMM TIGR03104 A0QVJ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2677864 2679237 . + 0 MSMEG_2595 MSMEG_2595 gamma-glutamylisopropylamide synthetase identified by match to protein family HMM PF00120 A0QVJ4 No unknown Rv2860c Rv2860c NC_008596.1 Mycobrowser_v3 CDS 734617 735581 . + 0 MSMEG_0653 MSMEG_0653 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2681364 2682137 . + 0 MSMEG_2598 MSMEG_2598 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QVJ7 No unknown Rv2857c Rv2857c NC_008596.1 Mycobrowser_v3 CDS 2682163 2682897 . + 0 MSMEG_2599 MSMEG_2599 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF02082; match to protein family HMM PF07729 A0QVJ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2682903 2683643 . - 0 MSMEG_2600 MSMEG_2600 regulatory protein identified by match to protein family HMM PF01614 A0QVJ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2683715 2684461 . + 0 MSMEG_2601 pcaH protocatechuate 3,4-dioxygenase, beta subunit identified by match to protein family HMM PF00775; match to protein family HMM TIGR02422 A0QVK0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2684461 2685018 . + 0 MSMEG_2602 pcaG protocatechuate 3,4-dioxygenase, alpha subunit identified by match to protein family HMM PF00775; match to protein family HMM TIGR02423 A0QVK1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2685015 2686217 . + 0 MSMEG_2603 pcaB 3-carboxy-cis,cis-muconate cycloisomerase identified by match to protein family HMM PF00206; match to protein family HMM TIGR02426 A0QVK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2686214 2686618 . + 0 MSMEG_2604 pcaC 4-carboxymuconolactone decarboxylase identified by match to protein family HMM PF02627; match to protein family HMM TIGR02425 A0QVK3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2686690 2687430 . - 0 MSMEG_2605 MSMEG_2605 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QVK4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2687544 2687846 . + 0 MSMEG_2606 MSMEG_2606 ArsR-family protein transcriptional regulator identified by match to protein family HMM PF01022; match to protein family HMM PF07848 A0QVK5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2687927 2688613 . + 0 MSMEG_2607 cbiM cobalamin biosynthesis protein CbiM identified by match to protein family HMM PF01891 A0QVK6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2688610 2688948 . + 0 MSMEG_2608 MSMEG_2608 cobalt transport protein CbiM A0QVK7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2833409 2833780 . + 0 MSMEG_2768 MSMEG_2768 OB-fold nucleic acid binding domain protein identified by match to protein family HMM PF01336 A0QW11 No unknown Rv2694c Rv2694c NC_008596.1 Mycobrowser_v3 CDS 2689726 2690475 . + 0 MSMEG_2610 MSMEG_2610 cobalt transport protein ATP-binding subunit identified by match to protein family HMM PF00005 A0QVK9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2690486 2691871 . - 0 MSMEG_2611 MSMEG_2611 pyridine nucleotide-disulphide oxidoreductase family protein identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992 A0QVL0 No unknown Rv2855 Rv2855 NC_008596.1 Mycobrowser_v3 CDS 2691876 2692907 . - 0 MSMEG_2612 MSMEG_2612 conserved hypothetical protein A0QVL1 No unknown Rv2854 Rv2854 NC_008596.1 Mycobrowser_v3 CDS 2707322 2707672 . + 0 MSMEG_2626 MSMEG_2626 conserved hypothetical protein identified by match to protein family HMM PF04296 A0QVM5 No unknown Rv2840c Rv2840c NC_008596.1 Mycobrowser_v3 CDS 782191 783361 . + 0 MSMEG_0694 MSMEG_0694 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2693158 2694690 . + 0 MSMEG_2613 mqo malate:quinone-oxidoreductase identified by match to protein family HMM PF01266; match to protein family HMM PF06039; match to protein family HMM TIGR01320 A0QVL2 No unknown Rv2852c Rv2852c NC_008596.1 Mycobrowser_v3 CDS 2694704 2695177 . + 0 MSMEG_2614 MSMEG_2614 ElaA protein identified by match to protein family HMM PF00583 A0QVL3 No unknown Rv2851c Rv2851c NC_008596.1 Mycobrowser_v3 CDS 2695174 2697057 . + 0 MSMEG_2615 MSMEG_2615 chelatase identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728 A0QVL4 No unknown Rv2850c Rv2850c NC_008596.1 Mycobrowser_v3 CDS 2697091 2697684 . + 0 MSMEG_2616 cobO cob(I)alamin adenosyltransferase identified by match to protein family HMM PF02572; match to protein family HMM TIGR00708 A0QVL5 No unknown Rv2849c Rv2849c NC_008596.1 Mycobrowser_v3 CDS 2697720 2699096 . + 0 MSMEG_2617 cobB cobyrinic Acid a,c-diamide synthase identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00379 A0QVL6 No unknown Rv2848c Rv2848c NC_008596.1 Mycobrowser_v3 CDS 2699162 2700370 . + 0 MSMEG_2618 cobA uroporphyrin-III C-methyltransferase identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470 A0QVL7 No unknown Rv2847c Rv2847c NC_008596.1 Mycobrowser_v3 CDS 2700404 2701951 . + 0 MSMEG_2619 MSMEG_2619 efflux protein identified by match to protein family HMM PF07690 A0QVL8 No unknown Rv2846c Rv2846c NC_008596.1 Mycobrowser_v3 CDS 2701968 2702672 . + 0 MSMEG_2620 MSMEG_2620 hypothetical protein identified by Glimmer2; putative A0QVL9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2717025 2718056 . - 0 MSMEG_2636 MSMEG_2636 regulatory protein, LacI identified by match to protein family HMM PF00356; match to protein family HMM PF00532 A0QVN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2702707 2704464 . + 0 MSMEG_2621 proS prolyl-tRNA synthetase identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00409 A0QVM0 No unknown Rv2845c Rv2845c NC_008596.1 Mycobrowser_v3 CDS 2704485 2704958 . - 0 MSMEG_2622 MSMEG_2622 conserved hypothetical alanine rich protein A0QVM1 No unknown Rv2844 Rv2844 NC_008596.1 Mycobrowser_v3 CDS 2704955 2705503 . - 0 MSMEG_2623 MSMEG_2623 Tat (twin-arginine translocation) pathway signal sequence domain protein identified by match to protein family HMM TIGR01409 A0QVM2 No unknown Rv2843 Rv2843 NC_008596.1 Mycobrowser_v3 CDS 2705700 2706245 . + 0 MSMEG_2624 MSMEG_2624 conserved hypothetical protein identified by match to protein family HMM PF02576 A0QVM3 No unknown Rv2842c Rv2842c NC_008596.1 Mycobrowser_v3 CDS 809823 810451 . + 0 MSMEG_0721 MSMEG_0721 RemQ protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2706242 2707273 . + 0 MSMEG_2625 nusA transcription termination factor NusA identified by match to protein family HMM TIGR01953 A0QVM4 No unknown Rv2841c Rv2841c NC_008596.1 Mycobrowser_v3 CDS 2750910 2751554 . + 0 MSMEG_2672 MSMEG_2672 acyl-CoA synthase A0QVS1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2708747 2710579 . + 0 MSMEG_2628 infB translation initiation factor IF-2 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487 A0QVM7 No unknown Rv2839c Rv2839c NC_008596.1 Mycobrowser_v3 CDS 2710579 2711049 . + 0 MSMEG_2629 rbfA ribosome-binding factor A identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082 A0QVM8 No unknown Rv2838c Rv2838c NC_008596.1 Mycobrowser_v3 CDS 2711052 2712074 . + 0 MSMEG_2630 MSMEG_2630 DHH family protein identified by match to protein family HMM PF01368; match to protein family HMM PF02272 A0QVM9 No unknown Rv2837c Rv2837c NC_008596.1 Mycobrowser_v3 CDS 2712067 2713434 . + 0 MSMEG_2631 MSMEG_2631 MATE efflux family protein identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797 A0QVN0 No unknown Rv2836c Rv2836c NC_008596.1 Mycobrowser_v3 CDS 2713440 2714060 . - 0 MSMEG_2632 MSMEG_2632 SAM-dependent methyltransferase identified by match to protein family HMM PF01209 A0QVN1 No unknown Rv0329c Rv0329c NC_008596.1 Mycobrowser_v3 CDS 2714104 2714925 . - 0 MSMEG_2633 MSMEG_2633 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0QVN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2714946 2715989 . - 0 MSMEG_2634 MSMEG_2634 conserved hypothetical protein A0QVN3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2716010 2716903 . - 0 MSMEG_2635 MSMEG_2635 ABC transporter permease protein identified by match to protein family HMM PF00528 A0QVN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6420806 6421196 . + 0 MSMEG_6364 MSMEG_6364 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2718150 2719415 . + 0 MSMEG_2637 MSMEG_2637 oxidoreductase, Gfo/Idh/MocA family protein identified by match to protein family HMM PF01408; match to protein family HMM PF02894 A0QVN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2719412 2720602 . + 0 MSMEG_2638 MSMEG_2638 conserved hypothetical protein identified by match to protein family HMM PF06187 A0QVN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2720599 2721432 . + 0 MSMEG_2640 MSMEG_2640 3-dehydroshikimate dehydratase identified by match to protein family HMM PF01261 A0QVN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 858306 859402 . + 0 MSMEG_0774 MSMEG_0774 flavin-dependent oxidoreductase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2721419 2722243 . - 0 MSMEG_2639 MSMEG_2639 integral membrane protein identified by match to protein family HMM PF00892 A0QVN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3922049 3922738 . + 0 MSMEG_3851 MSMEG_3851 LppI protein A0QZ03 No unknown Rv2046 Rv2046 NC_008596.1 Mycobrowser_v3 CDS 2724054 2725727 . - 0 MSMEG_2644 MSMEG_2644 putative hydrolase identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976 A0QVP3 No unknown Rv2800 Rv2800 NC_008596.1 Mycobrowser_v3 CDS 2725764 2726348 . - 0 MSMEG_2645 MSMEG_2645 conserved hypothetical protein A0QVP4 No unknown Rv2799 Rv2799 NC_008596.1 Mycobrowser_v3 CDS 2726511 2727722 . - 0 MSMEG_2646 MSMEG_2646 mini-circle putative transposase for identified by match to protein family HMM PF01548; match to protein family HMM PF02371 A0QVP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2727996 2728961 . + 0 MSMEG_2647 MSMEG_2647 metallophosphoesterase identified by match to protein family HMM PF00149 A0QVP6 No unknown Rv2795c Rv2795c NC_008596.1 Mycobrowser_v3 CDS 2728958 2729623 . + 0 MSMEG_2648 MSMEG_2648 Sfp-type phosphopantetheinyl transferase identified by match to protein family HMM PF01648 A0QVP7 No unknown Rv2794c Rv2794c NC_008596.1 Mycobrowser_v3 CDS 2729620 2730531 . + 0 MSMEG_2649 truB tRNA pseudouridine synthase B identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 A0QVP8 No unknown Rv2793c Rv2793c NC_008596.1 Mycobrowser_v3 CDS 2730551 2731765 . - 0 MSMEG_2650 MSMEG_2650 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0QVP9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2731781 2732938 . - 0 MSMEG_2651 MSMEG_2651 alkanesulfonate monooxygenase family protein identified by similarity to SP:P40402 A0QVQ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2733015 2733725 . - 0 MSMEG_2652 MSMEG_2652 iron repressor protein identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023 A0QVQ1 No unknown Rv2788 Rv2788 NC_008596.1 Mycobrowser_v3 CDS 2733807 2734784 . + 0 MSMEG_2653 ribF riboflavin biosynthesis protein RibF identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125 A0QVQ2 No unknown Rv2786c Rv2786c NC_008596.1 Mycobrowser_v3 CDS 2734886 2735155 . + 0 MSMEG_2654 rpsO ribosomal protein S15 identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952 A0QVQ3 No unknown Rv2785c Rv2785c NC_008596.1 Mycobrowser_v3 CDS 2735260 2735667 . + 0 MSMEG_2655 MSMEG_2655 LppU protein A0QVQ4 No unknown Rv2784c Rv2784c NC_008596.1 Mycobrowser_v3 CDS 2735997 2738288 . + 0 MSMEG_2656 gpsI guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR02696 A0QVQ5 No unknown Rv2783c Rv2783c NC_008596.1 Mycobrowser_v3 CDS 2738311 2739615 . + 0 MSMEG_2657 MSMEG_2657 peptidase, M16 family protein identified by match to protein family HMM PF00675; match to protein family HMM PF05193 A0QVQ6 No unknown Rv2782c Rv2782c NC_008596.1 Mycobrowser_v3 CDS 2739634 2740515 . + 0 MSMEG_2658 MSMEG_2658 beta-lactamase identified by match to protein family HMM PF00144; match to protein family HMM TIGR01409 A0QVQ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2740567 2741682 . - 0 MSMEG_2659 ald alanine dehydrogenase identified by match to protein family HMM PF01262; match to protein family HMM PF02826; match to protein family HMM PF05222; match to protein family HMM TIGR00518 A0QVQ8 No unknown Rv2780 Rv2780 NC_008596.1 Mycobrowser_v3 CDS 2741778 2742293 . + 0 MSMEG_2660 MSMEG_2660 transcriptional regulator, AsnC family protein identified by match to protein family HMM PF01037 A0QVQ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2742304 2743065 . - 0 MSMEG_2661 MSMEG_2661 domain of unknown function (306) family protein identified by match to protein family HMM PF03724 A0QVR0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2743220 2743516 . + 0 MSMEG_2662 MSMEG_2662 hypothetical protein identified by Glimmer2; putative A0QVR1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2743713 2745449 . - 0 MSMEG_2663 MSMEG_2663 conserved hypothetical protein identified by match to protein family HMM PF02720 A0QVR2 No unknown Rv1128c,Rv1148c,Rv1945 Rv1128c,Rv1148c,Rv1945 NC_008596.1 Mycobrowser_v3 CDS 2831738 2832532 . + 0 MSMEG_2766 MSMEG_2766 conserved hypothetical protein A0QW09 No unknown Rv2696c Rv2696c NC_008596.1 Mycobrowser_v3 CDS 2745690 2746427 . + 0 MSMEG_2664 dapB dihydrodipicolinate reductase identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036 A0QVR3 No unknown Rv2773c Rv2773c NC_008596.1 Mycobrowser_v3 CDS 2746424 2746891 . + 0 MSMEG_2665 MSMEG_2665 conserved hypothetical protein A0QVR4 No unknown Rv2772c Rv2772c NC_008596.1 Mycobrowser_v3 CDS 2746888 2747343 . + 0 MSMEG_2666 MSMEG_2666 multimeric flavodoxin WrbA A0QVR5 No unknown Rv2771c Rv2771c NC_008596.1 Mycobrowser_v3 CDS 2747354 2747815 . + 0 MSMEG_2668 MSMEG_2668 conserved hypothetical protein A0QVR6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2747809 2748729 . - 0 MSMEG_2667 MSMEG_2667 HpcH/HpaI aldolase/citrate lyase family protein, putative identified by match to protein family HMM PF03328 A0QVR7 No unknown Rv3075c Rv3075c NC_008596.1 Mycobrowser_v3 CDS 4988175 4988669 . - 0 MSMEG_4892 MSMEG_4892 conserved hypothetical protein A0R1W0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2749543 2750343 . + 0 MSMEG_2670 thyA thymidylate synthase identified by match to protein family HMM PF00303 A0QVR9 No unknown Rv2764c Rv2764c NC_008596.1 Mycobrowser_v3 CDS 2750372 2750836 . + 0 MSMEG_2671 folA dihydrofolate reductase identified by match to protein family HMM PF00186 A0QVS0 No unknown Rv2763c Rv2763c NC_008596.1 Mycobrowser_v3 CDS 2751938 2753338 . + 0 MSMEG_2675 MSMEG_2675 ISMsm8, transposase identified by similarity to SP:P37248; match to protein family HMM PF00665 A0QVS2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2753996 2754322 . - 0 MSMEG_2676 MSMEG_2676 IS1137, transposase orfA similar at the nucleotide level to IS1137 in the IS Finder database.; identified by match to protein family HMM PF01527 A0QQE2 No unknown Rv3474 Rv3474 NC_008596.1 Mycobrowser_v3 CDS 2754283 2755590 . - 0 MSMEG_2677 MSMEG_2677 conserved large membrane protein identified by match to protein family HMM PF03176 A0QVS4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2755771 2755920 . - 0 MSMEG_2678 MSMEG_2678 hypothetical protein identified by Glimmer2; putative A0QVS5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2756022 2757218 . + 0 MSMEG_2679 MSMEG_2679 conserved hypothetical protein identified by match to protein family HMM PF06224 A0QVS6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2757263 2758669 . - 0 MSMEG_2680 MSMEG_2680 amino acid transporter identified by match to protein family HMM PF00324 A0QVS7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2758699 2759628 . - 0 MSMEG_2681 MSMEG_2681 proline imino-peptidase identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250 A0QVS8 No unknown Rv0840c Rv0840c NC_008596.1 Mycobrowser_v3 CDS 6599984 6601626 . - 0 MSMEG_6543 MSMEG_6543 GAF domain protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01590 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2759690 2760487 . + 0 MSMEG_2682 MSMEG_2682 transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QVS9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2760518 2761270 . + 0 MSMEG_2683 thyX thymidylate synthase, flavin-dependent identified by match to protein family HMM PF02511; match to protein family HMM TIGR02170 A0QVT0 No unknown Rv2754c Rv2754c NC_008596.1 Mycobrowser_v3 CDS 2761296 2762198 . + 0 MSMEG_2684 dapA dihydrodipicolinate synthase identified by match to protein family HMM PF00701; match to protein family HMM TIGR00674 A0QVT1 No unknown Rv2753c Rv2753c NC_008596.1 Mycobrowser_v3 CDS 2762206 2763882 . + 0 MSMEG_2685 MSMEG_2685 metallo-beta-lactamase superfamily protein identified by match to protein family HMM PF00753; match to protein family HMM PF07521 A0QVT2 No unknown Rv2752c Rv2752c NC_008596.1 Mycobrowser_v3 CDS 2763894 2764331 . - 0 MSMEG_2686 MSMEG_2686 conserved hypothetical protein A0QVT3 No unknown Rv2620c Rv2620c NC_008596.1 Mycobrowser_v3 CDS 2764345 2765172 . - 0 MSMEG_2687 MSMEG_2687 carveol dehydrogenase identified by match to protein family HMM PF00106 A0QVT4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2765195 2765509 . - 0 MSMEG_2688 MSMEG_2688 antibiotic biosynthesis monooxygenase domain protein identified by match to protein family HMM PF03992 A0QVT5 No unknown Rv2749 Rv2749 NC_008596.1 Mycobrowser_v3 CDS 2765524 2768304 . + 0 MSMEG_2690 MSMEG_2690 DNA translocase FtsK identified by match to protein family HMM PF01580 A0QVT6 No unknown Rv2748c Rv2748c NC_008596.1 Mycobrowser_v3 CDS 2765743 2765871 . - 0 MSMEG_2689 MSMEG_2689 hypothetical protein identified by Glimmer2; putative A0QVT7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2768315 2768797 . - 0 MSMEG_2691 MSMEG_2691 acetyltransferase, gnat family protein identified by match to protein family HMM PF00583 A0QVT8 No unknown Rv2747 Rv2747 NC_008596.1 Mycobrowser_v3 CDS 2768903 2769508 . + 0 MSMEG_2692 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560 A0QVT9 No unknown Rv2746c Rv2746c NC_008596.1 Mycobrowser_v3 CDS 2769486 2769974 . + 0 MSMEG_2693 MSMEG_2693 competence-damaged protein identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199 A0QVU0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2770097 2770435 . + 0 MSMEG_2694 MSMEG_2694 transcriptional regulator, XRE family protein identified by match to protein family HMM PF01381 A0QVU1 No unknown Rv2745c Rv2745c NC_008596.1 Mycobrowser_v3 CDS 2771533 2772369 . + 0 MSMEG_2696 MSMEG_2696 putative conserved membrane alanine rich protein A0QVU3 No unknown Rv2743c Rv2743c NC_008596.1 Mycobrowser_v3 CDS 2772377 2772784 . - 0 MSMEG_2697 MSMEG_2697 conserved hypothetical protein A0QVU4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2772781 2773191 . - 0 MSMEG_2698 MSMEG_2698 conserved hypothetical protein identified by match to protein family HMM PF07366; match to protein family HMM PF07858 A0QVU5 No unknown Rv2740 Rv2740 NC_008596.1 Mycobrowser_v3 CDS 2773253 2774425 . + 0 MSMEG_2699 MSMEG_2699 conserved hypothetical protein A0QVU6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2774435 2774629 . + 0 MSMEG_2700 MSMEG_2700 conserved hypothetical protein A0QVU7 No unknown Rv2738c Rv2738c NC_008596.1 Mycobrowser_v3 CDS 2774673 2774876 . + 0 MSMEG_2701 MSMEG_2701 hypothetical protein identified by Glimmer2; putative A0QVU8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2774889 2776013 . - 0 MSMEG_2702 hypD hydrogenase expression/formation protein HypD identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075 A0QVU9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2776054 2776338 . - 0 MSMEG_2703 hypC hydrogenase assembly chaperone HypC/HupF identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074 A0QVV0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2777828 2778901 . - 0 MSMEG_2705 hypE hydrogenase expression/formation protein HypE identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124 A0QVV1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2780500 2781228 . - 0 MSMEG_2710 MSMEG_2710 hypothetical protein identified by Glimmer2; putative A0QVV6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2770675 2771514 . + 0 MSMEG_2695 35kd_ag 35 kDa protein identified by match to protein family HMM PF04012 A0QVU2 No conserved hypotheticals Rv2744c Rv2744c NC_008596.1 Mycobrowser_v3 CDS 2781233 2783524 . - 0 MSMEG_2711 hypF [NiFe] hydrogenase maturation protein HypF identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143 A0QVV7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2783521 2783781 . - 0 MSMEG_2712 hypC hydrogenase assembly chaperone HypC/HupF identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074 A0QVV8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2783783 2784265 . - 0 MSMEG_2713 MSMEG_2713 peptidase M52, hydrogen uptake protein identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072 A0QVV9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2784269 2784388 . - 0 MSMEG_2714 MSMEG_2714 hypothetical protein identified by Glimmer2; putative A0QVW0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2784414 2785739 . - 0 MSMEG_2715 MSMEG_2715 conserved hypothetical protein A0QVW1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2785736 2786392 . - 0 MSMEG_2716 MSMEG_2716 conserved hypothetical protein A0QVW2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2786389 2786949 . - 0 MSMEG_2717 MSMEG_2717 conserved hypothetical protein A0QVW3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2787037 2787960 . - 0 MSMEG_2718 MSMEG_2718 iron-sulfur cluster-binding protein, Rieske family protein, putative identified by match to protein family HMM PF01106 A0QVW4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6654886 6656026 . + 0 MSMEG_6599 MSMEG_6599 regulatory protein, LuxR; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2787964 2789760 . - 0 MSMEG_2719 MSMEG_2719 hydrogen:quinone oxidoreductase identified by match to protein family HMM PF00374 A0QVW5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2789863 2790918 . - 0 MSMEG_2720 MSMEG_2720 NADH ubiquinone oxidoreductase, 20 kda subunit identified by match to protein family HMM PF01058 A0QVW6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2791028 2791807 . - 0 MSMEG_2721 hypB hydrogenase accessory protein HypB identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073 A0QVW7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2791809 2792138 . - 0 MSMEG_2722 hypA hydrogenase nickel insertion protein HypA identified by match to protein family HMM PF01155 A0QVW8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2792363 2793412 . + 0 MSMEG_2723 recA protein RecA identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012 Q59560 No unknown NC_008596.1 Mycobrowser_v3 CDS 2794005 2794904 . - 0 MSMEG_2725 MSMEG_2725 glutamate transporter permease protein GluD identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 A0QVX1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2794901 2795581 . - 0 MSMEG_2726 MSMEG_2726 glutamate permease identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 A0QVX2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2795600 2796421 . - 0 MSMEG_2727 MSMEG_2727 glutamate binding protein identified by match to protein family HMM PF00497 A0QVX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2796447 2797232 . - 0 MSMEG_2728 MSMEG_2728 glutamate transport ATP-binding protein GluA identified by match to protein family HMM PF00005 A0QVX4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2797337 2798875 . + 0 MSMEG_2729 miaB tRNA-I(6)A37 thiotransferase enzyme MiaB identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574 A0QVX5 No unknown Rv2733c Rv2733c NC_008596.1 Mycobrowser_v3 CDS 2799515 2800879 . - 0 MSMEG_2731 MSMEG_2731 ATPase involved in DNA repair identified by match to protein family HMM PF03993 A0QVX6 No unknown Rv2731 Rv2731 NC_008596.1 Mycobrowser_v3 CDS 2801006 2801893 . + 0 MSMEG_2732 MSMEG_2732 conserved hypothetical protein A0QVX7,A4ZHS5 No unknown Rv2729c Rv2729c NC_008596.1 Mycobrowser_v3 CDS 2801903 2802589 . + 0 MSMEG_2733 MSMEG_2733 conserved hypothetical protein A0QVX8 No unknown Rv2728c Rv2728c NC_008596.1 Mycobrowser_v3 CDS 6580067 6580456 . + 0 MSMEG_6518 MSMEG_6518 conserved hypothetical protein A0R6E3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2802586 2803494 . + 0 MSMEG_2734 miaA tRNA delta(2)-isopentenylpyrophosphate transferase identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174 A0QVX9 No unknown Rv2727c Rv2727c NC_008596.1 Mycobrowser_v3 CDS 2803499 2804374 . + 0 MSMEG_2735 dapF diaminopimelate epimerase identified by match to protein family HMM PF01678; match to protein family HMM TIGR00652 A0QVY0 No unknown Rv2726c Rv2726c NC_008596.1 Mycobrowser_v3 CDS 2804420 2805832 . + 0 MSMEG_2736 MSMEG_2736 GTP-binding protein identified by match to protein family HMM PF01926 A0QVY1 No unknown Rv2725c Rv2725c NC_008596.1 Mycobrowser_v3 CDS 2805853 2807556 . - 0 MSMEG_2737 MSMEG_2737 ppe family protein A0QVY2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2823878 2824114 . + 0 MSMEG_2754 MSMEG_2754 conserved hypothetical protein A0QVZ7 No unknown Rv2708c Rv2708c NC_008596.1 Mycobrowser_v3 CDS 2807642 2809933 . - 0 MSMEG_2738 MSMEG_2738 biotin sulfoxide reductase identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR00509 A0QVY3 No unknown Rv1442 Rv1442 NC_008596.1 Mycobrowser_v3 CDS 2810192 2812627 . + 0 MSMEG_2739 MSMEG_2739 conserved hypothetical protein A0QVY4 No unknown Rv2721c Rv2721c NC_008596.1 Mycobrowser_v3 CDS 2812637 2813368 . - 0 MSMEG_2740 lexA LexA repressor identified by similarity to SP:P31080; match to protein family HMM PF00717; match to protein family HMM PF01726; match to protein family HMM TIGR00498 A0QVY5 No unknown Rv2720 Rv2720 NC_008596.1 Mycobrowser_v3 CDS 2813453 2813581 . + 0 MSMEG_2741 MSMEG_2741 hypothetical protein identified by Glimmer2; putative A0QVY6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2813632 2814189 . + 0 MSMEG_2742 MSMEG_2742 DNA-damage-inducible protein identified by match to protein family HMM PF01476 A0QVY7 No unknown Rv2719c Rv2719c NC_008596.1 Mycobrowser_v3 CDS 2814351 2814803 . + 0 MSMEG_2743 nrdR transcriptional regulator, NrdR family protein identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244 A0QVY8 No unknown Rv2718c Rv2718c NC_008596.1 Mycobrowser_v3 CDS 2814822 2815511 . - 0 MSMEG_2744 MSMEG_2744 thymidylate synthase identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654 A0QVY9 No unknown Rv2716 Rv2716 NC_008596.1 Mycobrowser_v3 CDS 2816586 2817632 . - 0 MSMEG_2746 MSMEG_2746 conserved hypothetical alanine and leucine rich protein identified by match to protein family HMM PF01908 A0QVZ0 No unknown Rv2714 Rv2714 NC_008596.1 Mycobrowser_v3 CDS 2818671 2820086 . - 0 MSMEG_2748 sthA soluble pyridine nucleotide transhydrogenase identified by similarity to SP:P27306; match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992 A0QVZ1 No unknown Rv2713 Rv2713 NC_008596.1 Mycobrowser_v3 CDS 2820136 2821314 . + 0 MSMEG_2749 MSMEG_2749 conserved hypothetical protein A0QVZ2 No unknown Rv2712c Rv2712c NC_008596.1 Mycobrowser_v3 CDS 2821344 2822036 . - 0 MSMEG_2750 MSMEG_2750 iron-dependent repressor IdeR identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023 A0QVZ3 No unknown Rv2711 Rv2711 NC_008596.1 Mycobrowser_v3 CDS 2822116 2822265 . - 0 MSMEG_2751 MSMEG_2751 hypothetical protein identified by Glimmer2; putative A0QVZ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2822265 2823224 . - 0 MSMEG_2752 MSMEG_2752 sigma factor SigB identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QVZ5 No unknown Rv2710 Rv2710 NC_008596.1 Mycobrowser_v3 CDS 2824118 2825110 . - 0 MSMEG_2755 MSMEG_2755 conserved hypothetical protein identified by match to protein family HMM PF03631 A0QVZ8 No unknown Rv2707 Rv2707 NC_008596.1 Mycobrowser_v3 CDS 2825183 2825374 . - 0 MSMEG_2756 MSMEG_2756 conserved hypothetical protein A0QVZ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2825532 2825897 . + 0 MSMEG_2757 MSMEG_2757 glutathione S-transferase domain protein identified by match to protein family HMM PF06108 A0QW00 No unknown Rv2705c Rv2705c NC_008596.1 Mycobrowser_v3 CDS 2826103 2826228 . + 0 MSMEG_2759 MSMEG_2759 hypothetical protein identified by Glimmer2; putative A0QW01 No unknown NC_008596.1 Mycobrowser_v3 CDS 2826225 2827625 . - 0 MSMEG_2758 MSMEG_2758 sigma factor MysA identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937 A0QW02 No unknown Rv2703 Rv2703 NC_008596.1 Mycobrowser_v3 CDS 2827821 2828639 . - 0 MSMEG_2760 MSMEG_2760 polyphosphate glucokinase identified by match to protein family HMM PF00480 A0QW03 No unknown Rv2702 Rv2702 NC_008596.1 Mycobrowser_v3 CDS 2828808 2829659 . + 0 MSMEG_2762 MSMEG_2762 inositol-1-monophosphatase identified by match to protein family HMM PF00459 A0QW04 No unknown Rv2701c Rv2701c NC_008596.1 Mycobrowser_v3 CDS 2829633 2830283 . - 0 MSMEG_2761 MSMEG_2761 putative secreted alanine rich protein A0QW05 No unknown Rv2700 Rv2700 NC_008596.1 Mycobrowser_v3 CDS 2830449 2830751 . + 0 MSMEG_2763 MSMEG_2763 conserved hypothetical protein A0QW06 No unknown Rv2699c Rv2699c NC_008596.1 Mycobrowser_v3 CDS 2830772 2831251 . - 0 MSMEG_2764 MSMEG_2764 probable conserved alanine rich transmembrane protein A0QW07 No unknown Rv2698 Rv2698 NC_008596.1 Mycobrowser_v3 CDS 2831277 2831741 . + 0 MSMEG_2765 MSMEG_2765 deoxyuridine 5'-triphosphate nucleotidohydrolase identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576 A0QW08 No unknown Rv2697c Rv2697c NC_008596.1 Mycobrowser_v3 CDS 2833777 2834520 . + 0 MSMEG_2770 MSMEG_2770 probable conserved integral membrane alanine and leucine rich protein A0QW12 No unknown Rv2693c Rv2693c NC_008596.1 Mycobrowser_v3 CDS 2834517 2835185 . - 0 MSMEG_2769 MSMEG_2769 TrkB protein identified by match to protein family HMM PF02080; match to protein family HMM PF02254 A0QW13 No unknown Rv2692 Rv2692 NC_008596.1 Mycobrowser_v3 CDS 2835223 2835897 . - 0 MSMEG_2771 MSMEG_2771 TrkA protein identified by match to protein family HMM PF02254 A0QW14 No unknown Rv2691 Rv2691 NC_008596.1 Mycobrowser_v3 CDS 2850789 2852081 . - 0 MSMEG_2785 MSMEG_2785 putative conserved integral membrane protein A0QW28 No unknown Rv2673 Rv2673 NC_008596.1 Mycobrowser_v3 CDS 2836004 2837998 . + 0 MSMEG_2772 MSMEG_2772 amino acid permease identified by match to protein family HMM PF00324 A0QW15 No unknown Rv2690c Rv2690c NC_008596.1 Mycobrowser_v3 CDS 2890162 2890698 . - 0 MSMEG_2827 MSMEG_2827 hypothetical protein identified by Glimmer2; putative A0QW63 No unknown NC_008596.1 Mycobrowser_v3 CDS 2837995 2839188 . + 0 MSMEG_2773 MSMEG_2773 putative RNA methyltransferase cg2084; identified by match to protein family HMM PF01938 A0QW16 No unknown Rv2689c Rv2689c NC_008596.1 Mycobrowser_v3 CDS 2839197 2840276 . - 0 MSMEG_2774 MSMEG_2774 diguanylate cyclase (ggdef) domain protein identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 A0QW17 No unknown NC_008596.1 Mycobrowser_v3 CDS 2840636 2841931 . + 0 MSMEG_2775 nhaA Na+/H+ antiporter NhaA identified by match to protein family HMM PF00999; match to protein family HMM PF06965; match to protein family HMM TIGR00773 A0QW18 No unknown NC_008596.1 Mycobrowser_v3 CDS 2841956 2843872 . + 0 MSMEG_2776 dxs 1-deoxy-D-xylulose-5-phosphate synthase identified by match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00204 A0QW19 No unknown Rv2682c Rv2682c NC_008596.1 Mycobrowser_v3 CDS 2843910 2844824 . + 0 MSMEG_2777 MSMEG_2777 alpha/beta hydrolase fold identified by match to protein family HMM PF00561 A0QW20 No unknown Rv1834 Rv1834 NC_008596.1 Mycobrowser_v3 CDS 2844852 2846099 . - 0 MSMEG_2778 MSMEG_2778 ribonuclease D identified by match to protein family HMM PF00570; match to protein family HMM PF01612 A0QW21 No unknown Rv2681 Rv2681 NC_008596.1 Mycobrowser_v3 CDS 2846102 2846683 . - 0 MSMEG_2779 MSMEG_2779 conserved hypothetical protein A0QW22 No unknown Rv2680 Rv2680 NC_008596.1 Mycobrowser_v3 CDS 2846805 2847866 . + 0 MSMEG_2780 hemE uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 A0QW23 No unknown Rv2678c Rv2678c NC_008596.1 Mycobrowser_v3 CDS 2847863 2849224 . + 0 MSMEG_2781 hemG protoporphyrinogen oxidase identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR00562 A0QW24 No unknown Rv2677c Rv2677c NC_008596.1 Mycobrowser_v3 CDS 2849229 2849924 . + 0 MSMEG_2782 MSMEG_2782 conserved hypothetical protein identified by match to protein family HMM PF06778 A0QW25 No unknown Rv2676c Rv2676c NC_008596.1 Mycobrowser_v3 CDS 2849980 2850276 . + 0 MSMEG_2783 MSMEG_2783 hypothetical protein identified by Glimmer2; putative A0QW26 No unknown NC_008596.1 Mycobrowser_v3 CDS 2850324 2850737 . - 0 MSMEG_2784 msrB methionine-R-sulfoxide reductase identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357 A0QW27 No unknown Rv2674 Rv2674 NC_008596.1 Mycobrowser_v3 CDS 2864837 2865649 . - 0 MSMEG_2798 MSMEG_2798 hypothetical protein identified by Glimmer2; putative A0QW42 No unknown NC_008596.1 Mycobrowser_v3 CDS 2852103 2853692 . - 0 MSMEG_2786 MSMEG_2786 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0QW29 No unknown Rv2672 Rv2672 NC_008596.1 Mycobrowser_v3 CDS 5109397 5109594 . - 0 MSMEG_5011 MSMEG_5011 hypothetical protein identified by Glimmer2; putative A0R275 No unknown NC_008596.1 Mycobrowser_v3 CDS 2853712 2854494 . - 0 MSMEG_2787 MSMEG_2787 putative riboflavin biosynthesis protein RibD identified by match to protein family HMM PF01872 A0QW30 No unknown Rv2671 Rv2671 NC_008596.1 Mycobrowser_v3 CDS 2854529 2855566 . + 0 MSMEG_2788 MSMEG_2788 ATP/GTP-binding integral membrane protein identified by match to protein family HMM PF03969 A0QW31 No unknown Rv2670c Rv2670c NC_008596.1 Mycobrowser_v3 CDS 2855568 2856098 . - 0 MSMEG_2789 MSMEG_2789 acetyltransferase, GNAT family protein identified by match to protein family HMM PF00583 A0QW32 No unknown Rv2669 Rv2669 NC_008596.1 Mycobrowser_v3 CDS 2856103 2856627 . - 0 MSMEG_2790 MSMEG_2790 conserved hypothetical protein A0QW33 No unknown Rv2668 Rv2668 NC_008596.1 Mycobrowser_v3 CDS 2856675 2857100 . - 0 MSMEG_2791 MSMEG_2791 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0QW34 No unknown NC_008596.1 Mycobrowser_v3 CDS 2857143 2857877 . - 0 MSMEG_2792 MSMEG_2792 Clp amino terminal domain protein identified by match to protein family HMM PF02861 A0QW35 No unknown Rv2667 Rv2667 NC_008596.1 Mycobrowser_v3 CDS 2857979 2859376 . + 0 MSMEG_2793 MSMEG_2793 sensor-type histidine kinase PrrB identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 A0QW36 No unknown NC_008596.1 Mycobrowser_v3 CDS 2859380 2860042 . - 0 MSMEG_2794 MSMEG_2794 transcriptional regulator, GntR family protein identified by similarity to SP:P33233; match to protein family HMM PF00392; match to protein family HMM PF07729 A0QW37 No unknown Rv0494 Rv0494 NC_008596.1 Mycobrowser_v3 CDS 2860101 2861342 . + 0 MSMEG_2795 MSMEG_2795 transmembrane transport protein identified by match to protein family HMM PF07690 A0QW38 No unknown NC_008596.1 Mycobrowser_v3 CDS 2861362 2862573 . + 0 MSMEG_2796 MSMEG_2796 integral membrane protein identified by match to protein family HMM PF03595 A0QW39 No unknown NC_008596.1 Mycobrowser_v3 CDS 2862579 2863511 . - 0 MSMEG_2797 MSMEG_2797 LysR-family protein transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QW40 No unknown Rv2282c Rv2282c NC_008596.1 Mycobrowser_v3 CDS 2863788 2864840 . + 0 MSMEG_2799 MSMEG_2799 phospho-2-dehydro-3-deoxyheptonate aldolase identified by match to protein family HMM PF00793; match to protein family HMM TIGR00034 A0QW41 No unknown NC_008596.1 Mycobrowser_v3 CDS 2868002 2869096 . + 0 MSMEG_2804 MSMEG_2804 two-component system sensor kinase identified by match to protein family HMM PF02518; match to protein family HMM PF07730; match to protein family HMM TIGR00229 A0QW47 No unknown NC_008596.1 Mycobrowser_v3 CDS 2869035 2869382 . + 0 MSMEG_2806 MSMEG_2806 two-component system response regulator A0QW48 No unknown NC_008596.1 Mycobrowser_v3 CDS 2869279 2870340 . - 0 MSMEG_2805 MSMEG_2805 ISMsm5, transposase identified by similarity to GB:CAD18826.1 A0QW49 No unknown NC_008596.1 Mycobrowser_v3 CDS 2870371 2870862 . + 0 MSMEG_2807 MSMEG_2807 two-component system response regulator identified by match to protein family HMM PF00196 A0QW50 No unknown NC_008596.1 Mycobrowser_v3 CDS 2871045 2871920 . + 0 MSMEG_2808 MSMEG_2808 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QW51 No unknown NC_008596.1 Mycobrowser_v3 CDS 2871947 2872393 . + 0 MSMEG_2809 MSMEG_2809 conserved hypothetical protein A0QW52 No unknown NC_008596.1 Mycobrowser_v3 CDS 2872390 2873601 . + 0 MSMEG_2810 MSMEG_2810 major facilitator superfamily protein identified by match to protein family HMM PF07690 A0QW53 No unknown NC_008596.1 Mycobrowser_v3 CDS 2873675 2874541 . - 0 MSMEG_2811 MSMEG_2811 hydride transferase 1 identified by match to protein family HMM PF00296 A0QW54 No unknown NC_008596.1 Mycobrowser_v3 CDS 2874564 2875436 . - 0 MSMEG_2812 MSMEG_2812 C-5 sterol desaturase A0QW55 No unknown NC_008596.1 Mycobrowser_v3 CDS 2875590 2876747 . + 0 MSMEG_2813 MSMEG_2813 sensor kinase identified by match to protein family HMM PF02518; match to protein family HMM PF07730 A0QW56 No unknown NC_008596.1 Mycobrowser_v3 CDS 2880208 2880504 . + 0 MSMEG_2817 MSMEG_2817 ABC efflux pump, fused inner membrane and ATPase subunits A0QW57 No unknown NC_008596.1 Mycobrowser_v3 CDS 2880573 2881502 . - 0 MSMEG_2818 MSMEG_2818 ISMsm1, transposase orfB This gene is similar at the protein level with ISRru1 in the IS Finder database.; identified by similarity to GP:16551202; match to protein family HMM PF00665 A0QT64 No unknown NC_008596.1 Mycobrowser_v3 CDS 6280594 6281244 . + 0 MSMEG_6217 MSMEG_6217 integral membrane protein A0R5J8 No unknown Rv3690 Rv3690 NC_008596.1 Mycobrowser_v3 CDS 2881499 2881834 . - 0 MSMEG_2819 MSMEG_2819 ISMsm1, transposase orfA similar at the protein level to ISRru1 in the IS Finder database.; identified by similarity to GP:16551202; match to protein family HMM PF01527 A0QT63 No unknown NC_008596.1 Mycobrowser_v3 CDS 2882879 2884048 . + 0 MSMEG_2820 MSMEG_2820 hypothetical protein identified by Glimmer2; putative A0QW60 No unknown NC_008596.1 Mycobrowser_v3 CDS 3011842 3012327 . + 0 MSMEG_2951 MSMEG_2951 [2Fe-2S] binding domain protein identified by match to protein family HMM PF00111; match to protein family HMM PF01799 A0QWI2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2885869 2887335 . + 0 MSMEG_2824 MSMEG_2824 IS1549, transposase identified by similarity to GP:2935133; match to protein family HMM PF01609 A0QNK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2098459 2098789 . + 0 MSMEG_2020 MSMEG_2020 hyi family protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to RF:NP457306.1 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2888948 2890171 . - 0 MSMEG_2826 MSMEG_2826 hypothetical protein identified by Glimmer2; putative A0QW62 No unknown NC_008596.1 Mycobrowser_v3 CDS 2890417 2891739 . + 0 MSMEG_2828 MSMEG_2828 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2891747 2892448 . - 0 MSMEG_2829 MSMEG_2829 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2892622 2893989 . - 0 MSMEG_2830 MSMEG_2830 ISMsm4, transposase identified by similarity to GP:150005; match to protein family HMM PF01610 A0QPK5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2894143 2894352 . - 0 MSMEG_2831 MSMEG_2831 hypothetical protein identified by Glimmer2; putative A0QW67 No unknown NC_008596.1 Mycobrowser_v3 CDS 2894648 2894974 . - 0 MSMEG_2832 MSMEG_2832 hypothetical protein identified by Glimmer2; putative A0QW68 No unknown NC_008596.1 Mycobrowser_v3 tRNA 2895086 2895160 . - 0 MSMEG_2833 MSMEG_2833 tRNA-Val No stable RNAs NC_008596.1 Mycobrowser_v3 tRNA 2895172 2895245 . - 0 MSMEG_2834 MSMEG_2834 tRNA-Cys No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 2896046 2898433 . + 0 MSMEG_2837 MSMEG_2837 nitrate reductase NarB identified by match to protein family HMM PF00384; match to protein family HMM PF01568 A0QW69 No unknown NC_008596.1 Mycobrowser_v3 CDS 2898445 2898927 . + 0 MSMEG_2838 MSMEG_2838 conserved hypothetical protein A0QW70 No unknown NC_008596.1 Mycobrowser_v3 CDS 2899010 2901400 . + 0 MSMEG_2839 MSMEG_2839 transcriptional accessory protein identified by match to protein family HMM PF00575 A0QW71 No unknown NC_008596.1 Mycobrowser_v3 CDS 2901404 2902102 . - 0 MSMEG_2840 MSMEG_2840 conserved hypothetical protein A0QW72 No unknown Rv0625c Rv0625c NC_008596.1 Mycobrowser_v3 CDS 2902133 2903578 . - 0 MSMEG_2841 MSMEG_2841 putative monooxygenase A0QW73 No unknown NC_008596.1 Mycobrowser_v3 CDS 2903622 2904917 . - 0 MSMEG_2842 ssuD nitrilotriacetate monooxygenase component A A0QW74 No unknown NC_008596.1 Mycobrowser_v3 CDS 4299335 4299844 . - 0 MSMEG_4216 MSMEG_4216 conserved hypothetical protein A0R005 No unknown NC_008596.1 Mycobrowser_v3 CDS 2904914 2906269 . - 0 MSMEG_2843 ssuD nitrilotriacetate monooxygenase component A A0QW75 No unknown NC_008596.1 Mycobrowser_v3 CDS 2992647 2993078 . + 0 MSMEG_2930 MSMEG_2930 conserved hypothetical protein TIGR02611 identified by match to protein family HMM TIGR02611 A0QWG1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2906266 2907879 . - 0 MSMEG_2844 MSMEG_2844 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0QW76 No unknown NC_008596.1 Mycobrowser_v3 CDS 2907894 2908766 . - 0 MSMEG_2845 MSMEG_2845 ABC transporter permease protein identified by match to protein family HMM PF00528 A0QW77 No unknown NC_008596.1 Mycobrowser_v3 CDS 2908763 2909731 . - 0 MSMEG_2846 MSMEG_2846 ABC transporter permease protein identified by match to protein family HMM PF00528 A0QW78 No unknown NC_008596.1 Mycobrowser_v3 CDS 2909734 2911320 . - 0 MSMEG_2847 MSMEG_2847 bacterial extracellular solute-binding protein, family protein 5 identified by match to protein family HMM PF00496 A0QW79 No unknown NC_008596.1 Mycobrowser_v3 CDS 2911537 2912946 . - 0 MSMEG_2848 MSMEG_2848 transmembrane efflux protein identified by match to protein family HMM PF07690 A0QW80 No unknown NC_008596.1 Mycobrowser_v3 CDS 2913021 2913422 . + 0 MSMEG_2849 MSMEG_2849 transcriptional regulatory protein identified by match to protein family HMM PF01638 A0QW81 No unknown NC_008596.1 Mycobrowser_v3 CDS 2913508 2913930 . + 0 MSMEG_2850 MSMEG_2850 mycobacterial family protein 11 protein identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0QW82 No unknown Rv3178 Rv3178 NC_008596.1 Mycobrowser_v3 CDS 2913944 2914399 . - 0 MSMEG_2851 MSMEG_2851 conserved hypothetical protein A0QW83 No unknown NC_008596.1 Mycobrowser_v3 CDS 2914474 2915304 . - 0 MSMEG_2852 MSMEG_2852 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106 A0QW84 No unknown NC_008596.1 Mycobrowser_v3 CDS 6011799 6012347 . + 0 MSMEG_5950 MSMEG_5950 putative colanic acid biosynthesis acetyltransferase WcaF A0R4T8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3083458 3083838 . - 0 MSMEG_3014 MSMEG_3014 conserved hypothetical protein identified by match to protein family HMM PF04944 A0QWP4 No unknown Rv2570 Rv2570 NC_008596.1 Mycobrowser_v3 CDS 2915518 2916330 . + 0 MSMEG_2853 MSMEG_2853 conserved hypothetical protein identified by match to protein family HMM PF02405 A0QW85 No unknown NC_008596.1 Mycobrowser_v3 CDS 2916342 2917187 . + 0 MSMEG_2854 MSMEG_2854 conserved hypothetical protein identified by match to protein family HMM PF02405 A0QW86 No unknown NC_008596.1 Mycobrowser_v3 CDS 2917214 2918401 . + 0 MSMEG_2855 MSMEG_2855 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QW87 No unknown NC_008596.1 Mycobrowser_v3 CDS 2918398 2919429 . + 0 MSMEG_2856 MSMEG_2856 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QW88 No unknown NC_008596.1 Mycobrowser_v3 CDS 5062989 5063429 . - 0 MSMEG_4965 MSMEG_4965 hypothetical protein identified by Glimmer2; putative A0R228 No unknown NC_008596.1 Mycobrowser_v3 CDS 2919429 2920505 . + 0 MSMEG_2857 MSMEG_2857 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QW89 No unknown NC_008596.1 Mycobrowser_v3 CDS 2920508 2921965 . + 0 MSMEG_2858 MSMEG_2858 virulence factor mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QW90 No unknown NC_008596.1 Mycobrowser_v3 CDS 2921962 2923152 . + 0 MSMEG_2859 MSMEG_2859 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QW91 No unknown NC_008596.1 Mycobrowser_v3 CDS 2923152 2924639 . + 0 MSMEG_2860 MSMEG_2860 virulence factor mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0QW92 No unknown NC_008596.1 Mycobrowser_v3 CDS 2924650 2925162 . - 0 MSMEG_2861 MSMEG_2861 conserved hypothetical protein A0QW93 No unknown NC_008596.1 Mycobrowser_v3 CDS 2925290 2925682 . + 0 MSMEG_2862 MSMEG_2862 conserved hypothetical protein A0QW94 No unknown NC_008596.1 Mycobrowser_v3 CDS 2925664 2926083 . + 0 MSMEG_2863 MSMEG_2863 conserved hypothetical protein A0QW95 No unknown NC_008596.1 Mycobrowser_v3 CDS 2926271 2926948 . + 0 MSMEG_2864 MSMEG_2864 conserved hypothetical protein A0QW96 No unknown NC_008596.1 Mycobrowser_v3 CDS 2926945 2927517 . + 0 MSMEG_2865 MSMEG_2865 conserved hypothetical protein A0QW97 No unknown NC_008596.1 Mycobrowser_v3 CDS 2927518 2928129 . - 0 MSMEG_2866 MSMEG_2866 thioesterase family protein identified by match to protein family HMM PF03061 A0QW98 No unknown NC_008596.1 Mycobrowser_v3 CDS 2928126 2929694 . - 0 MSMEG_2867 MSMEG_2867 3-ketosteroid dehydrogenase identified by match to protein family HMM PF00890 A0QW99 No unknown NC_008596.1 Mycobrowser_v3 CDS 2929813 2930508 . + 0 MSMEG_2868 MSMEG_2868 transcriptional regulator, PadR family protein identified by match to protein family HMM PF03551 A0QWA0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2930521 2932197 . - 0 MSMEG_2869 MSMEG_2869 3-ketosteroid-delta-1-dehydrogenase identified by match to protein family HMM PF00890; match to protein family HMM PF01266 A0QWA1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2932334 2933494 . + 0 MSMEG_2870 MSMEG_2870 oxygenase KshA identified by match to protein family HMM PF00355 A0QWA2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2933491 2933769 . + 0 MSMEG_2871 MSMEG_2871 conserved hypothetical protein A0QWA3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2933753 2934544 . + 0 MSMEG_2872 MSMEG_2872 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0QWA4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2934557 2936146 . + 0 MSMEG_2873 MSMEG_2873 3-ketosteroid-delta4 identified by match to protein family HMM PF00890; match to protein family HMM PF01266 A0QWA5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2936210 2937286 . - 0 MSMEG_2874 MSMEG_2874 conserved hypothetical protein A0QWA6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2937393 2938373 . - 0 MSMEG_2875 MSMEG_2875 esterase identified by match to protein family HMM PF07859 A0QWA7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2938382 2939260 . - 0 MSMEG_2876 MSMEG_2876 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0QWA8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2939257 2939754 . - 0 MSMEG_2877 MSMEG_2877 conserved hypothetical protein A0QWA9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2939825 2940826 . - 0 MSMEG_2878 MSMEG_2878 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441 A0QWB0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2940823 2941974 . - 0 MSMEG_2879 MSMEG_2879 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771 A0QWB1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2941974 2942756 . - 0 MSMEG_2880 MSMEG_2880 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QWB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2942785 2944206 . - 0 MSMEG_2881 MSMEG_2881 aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0QWB3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2944225 2945340 . - 0 MSMEG_2882 MSMEG_2882 5-exo-alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QWB4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2945429 2946994 . - 0 MSMEG_2883 MSMEG_2883 feruloyl-CoA synthetase identified by match to protein family HMM PF00501 A0QWB5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2947132 2949054 . + 0 MSMEG_2884 MSMEG_2884 cyclohexanone monooxygenase A0QWB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2118840 2119956 . - 0 MSMEG_2041 MSMEG_2041 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2949051 2949938 . + 0 MSMEG_2885 MSMEG_2885 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0QWB7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2949940 2950560 . - 0 MSMEG_2886 MSMEG_2886 stress responsive A/B Barrel Domain family protein identified by match to protein family HMM PF07876 A0QWB8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2950566 2950952 . - 0 MSMEG_2887 MSMEG_2887 conserved hypothetical protein A0QWB9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2951016 2952254 . + 0 MSMEG_2889 MSMEG_2889 NADH:flavin oxidoreductase/nadh oxidase identified by match to protein family HMM PF00724 A0QWC0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2952197 2953147 . - 0 MSMEG_2888 MSMEG_2888 lipase identified by match to protein family HMM PF07859 A0QWC1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2953144 2954040 . - 0 MSMEG_2890 MSMEG_2890 putative transcriptional regulator identified by match to protein family HMM PF01614 A0QWC2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2954224 2955126 . - 0 MSMEG_2891 MSMEG_2891 biphenyl-2,3-diol 1,2-dioxygenase 1 identified by match to protein family HMM PF00903 A0QWC3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2955143 2956324 . - 0 MSMEG_2892 MSMEG_2892 pigment production hydroxylase identified by match to protein family HMM PF08028 A0QWC4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2956384 2957439 . - 0 MSMEG_2893 MSMEG_2893 oxidoreductase, NAD/FAD-binding identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0QWC5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2957572 2959194 . + 0 MSMEG_2894 MSMEG_2894 steroid monooxygenase identified by match to protein family HMM PF01266 A0QWC6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2959295 2960089 . + 0 MSMEG_2895 MSMEG_2895 short chain oxidoreductase identified by match to protein family HMM PF00106 A0QWC7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2960097 2960960 . + 0 MSMEG_2896 MSMEG_2896 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QWC8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2961061 2961381 . + 0 MSMEG_2897 MSMEG_2897 conserved hypothetical protein A0QWC9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2961476 2962030 . + 0 MSMEG_2898 MSMEG_2898 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QWD0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2962139 2962834 . + 0 MSMEG_2899 MSMEG_2899 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106; match to protein family HMM PF07993 A0QWD1 No unknown Rv3174 Rv3174 NC_008596.1 Mycobrowser_v3 CDS 2963487 2964347 . - 0 MSMEG_2900 MSMEG_2900 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase identified by match to protein family HMM PF00561 A0QWD3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2964456 2965199 . + 0 MSMEG_2902 MSMEG_2902 hydrolase, putative identified by match to protein family HMM PF00795 A0QWD4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2967055 2967447 . - 0 MSMEG_2904 MSMEG_2904 MmcI protein A0QWD5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2967713 2968099 . + 0 MSMEG_2905 MSMEG_2905 transcriptional regulator identified by match to protein family HMM PF01638 A0QWD6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2968218 2969042 . + 0 MSMEG_2906 MSMEG_2906 conserved hypothetical protein A0QWD7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2969066 2970517 . - 0 MSMEG_2907 MSMEG_2907 putative oxidoreductase YeiQ identified by match to protein family HMM PF01232; match to protein family HMM PF08125 A0QWD8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2970514 2971437 . - 0 MSMEG_2908 MSMEG_2908 2-Keto-3-deoxy-gluconate kinase identified by match to protein family HMM PF00294 A0QWD9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2971434 2972642 . - 0 MSMEG_2909 MSMEG_2909 starvation-sensing protein RspA identified by match to protein family HMM PF01188; match to protein family HMM PF02746 A0QWE0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2972708 2973415 . + 0 MSMEG_2910 MSMEG_2910 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QWE1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2973561 2974910 . + 0 MSMEG_2911 MSMEG_2911 integral membrane transport protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QWE2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3001482 3002063 . + 0 MSMEG_2939 MSMEG_2939 glutamine amidotransferase subunit PdxT identified by match to protein family HMM PF01174; match to protein family HMM PF07685 A0QWH0 No unknown Rv2604c Rv2604c NC_008596.1 Mycobrowser_v3 CDS 2974935 2976311 . + 0 MSMEG_2912 MSMEG_2912 inner membrane metabolite transport protein YdfJ identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QWE3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2976308 2977282 . + 0 MSMEG_2914 MSMEG_2914 L-idonate 5-dehydrogenase identified by match to protein family HMM PF00107 A0QWE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2977263 2978126 . - 0 MSMEG_2913 MSMEG_2913 hydrolase identified by match to protein family HMM PF00561 A0QWE5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2992021 2992650 . + 0 MSMEG_2929 MSMEG_2929 thioesterase family protein identified by match to protein family HMM PF03061 A0QWG0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2978144 2979652 . - 0 MSMEG_2915 MSMEG_2915 sensor histidine kinase identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 A0QWE6 No unknown Rv1032c Rv1032c NC_008596.1 Mycobrowser_v3 CDS 2979652 2980419 . - 0 MSMEG_2916 MSMEG_2916 DNA-binding response regulator, PhoP family protein identified by match to protein family HMM PF00072; match to protein family HMM PF00486 A0QWE7 No unknown Rv1033c Rv1033c NC_008596.1 Mycobrowser_v3 CDS 2980507 2981214 . - 0 MSMEG_2917 MSMEG_2917 hypothetical protein identified by Glimmer2; putative A0QWE8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2981309 2982106 . - 0 MSMEG_2918 MSMEG_2918 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0QWE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2982192 2983193 . - 0 MSMEG_2919 MSMEG_2919 2-dehydropantoate 2-reductase identified by match to protein family HMM PF02558 A0QWF0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2983601 2984632 . + 0 MSMEG_2920 MSMEG_2920 aldo/keto reductase identified by match to protein family HMM PF00248 A0QWF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 2984629 2985426 . + 0 MSMEG_2921 MSMEG_2921 NADPH-flavin oxidoreductase identified by match to protein family HMM PF00881 A0QWF2 No unknown NC_008596.1 Mycobrowser_v3 CDS 2985445 2986239 . - 0 MSMEG_2922 MSMEG_2922 conserved hypothetical protein A0QWF3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2986362 2987162 . + 0 MSMEG_2923 MSMEG_2923 dehydrogenase/reductase SDR family protein member 1 identified by match to protein family HMM PF00106 A0QWF4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2987165 2988118 . - 0 MSMEG_2924 MSMEG_2924 permease binding-protein component identified by match to protein family HMM PF04069 A0QWF5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2988115 2988897 . - 0 MSMEG_2925 MSMEG_2925 permease membrane component identified by match to protein family HMM PF00528 A0QWF6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3543755 3544417 . - 0 MSMEG_3477 MSMEG_3477 possible inv protein identified by match to protein family HMM PF00877 A0QXZ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2988894 2990078 . - 0 MSMEG_2926 MSMEG_2926 glycine betaine/carnitine/choline transport ATP-binding protein opuCA identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186 A0QWF7 No unknown NC_008596.1 Mycobrowser_v3 CDS 2990071 2990718 . - 0 MSMEG_2927 MSMEG_2927 ABC transporter, permease protein OpuCB identified by match to protein family HMM PF00528 A0QWF8 No unknown NC_008596.1 Mycobrowser_v3 CDS 2990857 2991939 . + 0 MSMEG_2928 MSMEG_2928 conserved hypothetical protein A0QWF9 No unknown NC_008596.1 Mycobrowser_v3 CDS 2993163 2995217 . + 0 MSMEG_2931 thrS threonyl-tRNA synthetase identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418 A0QWG2 No unknown Rv2614c Rv2614c NC_008596.1 Mycobrowser_v3 CDS 2995226 2995843 . + 0 MSMEG_2932 MSMEG_2932 HIT family protein hydrolase identified by match to protein family HMM PF01230 A0QWG3 No unknown Rv2613c Rv2613c NC_008596.1 Mycobrowser_v3 CDS 2995840 2996508 . + 0 MSMEG_2933 MSMEG_2933 phosphatidylinositol synthase identified by match to protein family HMM PF01066 A0QWG4 No unknown Rv2612c Rv2612c NC_008596.1 Mycobrowser_v3 CDS 2996505 2997419 . + 0 MSMEG_2934 MSMEG_2934 lipid A biosynthesis lauroyl acyltransferase identified by match to protein family HMM PF03279 A0QWG5 No unknown Rv2611c Rv2611c NC_008596.1 Mycobrowser_v3 CDS 2997421 2998581 . + 0 MSMEG_2935 MSMEG_2935 phosphatidylinositol alpha-mannosyltransferase identified by match to protein family HMM PF00534 A0QWG6 No unknown Rv2610c Rv2610c NC_008596.1 Mycobrowser_v3 CDS 2998581 2999636 . + 0 MSMEG_2936 MSMEG_2936 hydrolase, nudix family protein identified by match to protein family HMM PF00293 A0QWG7 No unknown Rv2609c Rv2609c NC_008596.1 Mycobrowser_v3 CDS 3083882 3084628 . - 0 MSMEG_3015 MSMEG_3015 conserved hypothetical protein A0QWP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 2999713 3000624 . + 0 MSMEG_2937 MSMEG_2937 pyridoxine biosynthesis protein identified by match to protein family HMM PF01680; match to protein family HMM TIGR00343 A0QWG8 No unknown Rv2606c Rv2606c NC_008596.1 Mycobrowser_v3 CDS 3000634 3001485 . + 0 MSMEG_2938 tesB acyl-CoA thioesterase II identified by match to protein family HMM PF02551; match to protein family HMM TIGR00189 A0QWG9 No unknown Rv2605c Rv2605c NC_008596.1 Mycobrowser_v3 CDS 3602815 3603345 . - 0 MSMEG_3543 MSMEG_3543 soluble secreted antigen MPT53 A0QY58 No unknown Rv2878c Rv2878c NC_008596.1 Mycobrowser_v3 CDS 3002244 3002999 . + 0 MSMEG_2940 MSMEG_2940 conserved hypothetical protein identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033 A0QWH1 No unknown Rv2603c Rv2603c NC_008596.1 Mycobrowser_v3 CDS 3003003 3003653 . - 0 MSMEG_2941 MSMEG_2941 NAD dependent epimerase/dehydratase family protein identified by match to protein family HMM PF01370; match to protein family HMM PF05368 A0QWH2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3003678 3004109 . - 0 MSMEG_2942 MSMEG_2942 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein identified by match to protein family HMM PF00903 A0QWH3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3004295 3004852 . + 0 MSMEG_2943 ruvC crossover junction endodeoxyribonuclease RuvC identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228 A0QWH4 No unknown Rv2594c Rv2594c NC_008596.1 Mycobrowser_v3 CDS 3004849 3005436 . + 0 MSMEG_2944 ruvA holliday junction DNA helicase RuvA identified by match to protein family HMM PF01330; match to protein family HMM PF07499; match to protein family HMM TIGR00084 A0QWH5 No unknown Rv2593c Rv2593c NC_008596.1 Mycobrowser_v3 CDS 2161613 2162981 . - 0 MSMEG_2085 MSMEG_2085 NADPH-ferredoxin reductase fpra; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF07992 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3005439 3006494 . + 0 MSMEG_2945 ruvB holliday junction DNA helicase RuvB identified by match to protein family HMM PF00004; match to protein family HMM PF05491; match to protein family HMM PF05496; match to protein family HMM PF07728; match to protein family HMM TIGR00635 A0QWH6 No unknown Rv2592c Rv2592c NC_008596.1 Mycobrowser_v3 CDS 3006499 3006885 . + 0 MSMEG_2946 MSMEG_2946 transmembrane protein identified by match to protein family HMM PF06993 A0QWH7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3007026 3007814 . + 0 MSMEG_2947 MSMEG_2947 polyketide cyclase identified by match to protein family HMM PF04199 A0QWH8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3007814 3008629 . + 0 MSMEG_2948 MSMEG_2948 6-oxocamphor hydrolase identified by match to protein family HMM PF00378 A0QWH9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3008674 3011034 . + 0 MSMEG_2949 MSMEG_2949 carbon-monoxide dehydrogenase identified by match to protein family HMM PF01315; match to protein family HMM PF02738 A0QWI0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3011031 3011849 . + 0 MSMEG_2950 MSMEG_2950 carbon monoxide dehydrogenase, medium chain identified by match to protein family HMM PF00941 A0QWI1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3012396 3013715 . + 0 MSMEG_2952 MSMEG_2952 transport gene identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QWI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3013795 3014115 . + 0 MSMEG_2953 MSMEG_2953 ethyl tert-butyl ether degradation EthD identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118 A0QWI4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6606582 6607028 . - 0 MSMEG_6552 MSMEG_6552 conserved hypothetical protein A0R6H6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3014135 3015154 . + 0 MSMEG_2954 MSMEG_2954 LacI-family protein transcriptional regulator identified by match to protein family HMM PF00356; match to protein family HMM PF00532 A0QWI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3015273 3015719 . + 0 MSMEG_2955 MSMEG_2955 conserved hypothetical protein A0QWI6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3015785 3019291 . - 0 MSMEG_2956 MSMEG_2956 NAD dependent epimerase/dehydratase family protein identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746 A0QWI7 No unknown Rv2590 Rv2590 NC_008596.1 Mycobrowser_v3 CDS 3019572 3020189 . - 0 MSMEG_2957 MSMEG_2957 conserved hypothetical protein A0QWI8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3020304 3021023 . + 0 MSMEG_2958 MSMEG_2958 conserved hypothetical protein A0QWI9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3021057 3022397 . - 0 MSMEG_2959 gabT 4-aminobutyrate transaminase identified by match to protein family HMM PF00202; match to protein family HMM TIGR00700 A0QWJ0 No unknown Rv2589 Rv2589 NC_008596.1 Mycobrowser_v3 CDS 3022735 3023058 . + 0 MSMEG_2960 yajC preprotein translocase, YajC subunit identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739 A0QWJ1 No unknown Rv2588c Rv2588c NC_008596.1 Mycobrowser_v3 CDS 3023131 3024993 . + 0 MSMEG_2961 secD protein-export membrane protein SecD identified by match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129 A0QWJ2 No unknown Rv2587c Rv2587c NC_008596.1 Mycobrowser_v3 CDS 3024998 3026266 . + 0 MSMEG_2962 MSMEG_2962 protein-export membrane protein SecF identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966 A0QWJ3 No unknown Rv2586c Rv2586c NC_008596.1 Mycobrowser_v3 CDS 3117913 3118413 . + 0 MSMEG_3045 MSMEG_3045 integral membrane protein A0QWS3 No unknown Rv1382 Rv1382 NC_008596.1 Mycobrowser_v3 CDS 3026272 3027939 . + 0 MSMEG_2963 MSMEG_2963 bacterial extracellular solute-binding protein, family protein 5 identified by match to protein family HMM PF00496 A0QWJ4 No unknown Rv2585c Rv2585c NC_008596.1 Mycobrowser_v3 CDS 3027947 3028489 . + 0 MSMEG_2964 MSMEG_2964 adenine phosphoribosyltransferase identified by match to protein family HMM PF00156 A0QWJ5 No unknown Rv2584c Rv2584c NC_008596.1 Mycobrowser_v3 CDS 3043394 3044086 . - 0 MSMEG_2978 MSMEG_2978 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0QWK9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3028533 3030926 . + 0 MSMEG_2965 relA GTP pyrophosphokinase identified by similarity to SP:P52560; match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691 A0QWJ6 No unknown Rv2583c Rv2583c NC_008596.1 Mycobrowser_v3 CDS 3030981 3032378 . - 0 MSMEG_2966 MSMEG_2966 major facilitator family protein transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QWJ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3032378 3032989 . - 0 MSMEG_2967 MSMEG_2967 conserved hypothetical protein identified by similarity to GB:BAC46503.1; match to protein family HMM PF01613 A0QWJ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3033121 3033750 . + 0 MSMEG_2968 MSMEG_2968 conserved hypothetical protein A0QWJ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3033747 3034880 . + 0 MSMEG_2969 MSMEG_2969 NADH:flavin oxidoreductase/nadh oxidase identified by match to protein family HMM PF00724 A0QWK0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3034877 3035743 . + 0 MSMEG_2970 MSMEG_2970 polysaccharide deacetylase identified by match to protein family HMM PF01522 A0QWK1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3035748 3037301 . - 0 MSMEG_2971 MSMEG_2971 regulatory protein A0QWK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3037408 3038829 . + 0 MSMEG_2972 MSMEG_2972 permease, cytosine/purines, uracil, thiamine, allantoin family protein identified by match to protein family HMM PF02133 A0QWK3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3038835 3039791 . - 0 MSMEG_2973 MSMEG_2973 peptidyl-prolyl cis-trans isomerase identified by match to protein family HMM PF00160 A0QWK4 No unknown Rv2582 Rv2582 NC_008596.1 Mycobrowser_v3 CDS 3039885 3040748 . - 0 MSMEG_2974 MSMEG_2974 peptidyl-prolyl cis-trans isomerase, cyclophilin-type identified by match to protein family HMM PF00160 A0QWK5 No unknown Rv2582 Rv2582 NC_008596.1 Mycobrowser_v3 CDS 3040917 3041594 . + 0 MSMEG_2975 MSMEG_2975 metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 A0QWK6 No unknown Rv2581c Rv2581c NC_008596.1 Mycobrowser_v3 CDS 3041591 3042871 . + 0 MSMEG_2976 hisS histidyl-tRNA synthetase identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442 A0QWK7 No unknown Rv2580c Rv2580c NC_008596.1 Mycobrowser_v3 CDS 3044086 3044898 . - 0 MSMEG_2979 MSMEG_2979 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0QWL0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3044895 3046022 . - 0 MSMEG_2980 MSMEG_2980 putative membrane protein identified by match to protein family HMM PF02653 A0QWL1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3046019 3046903 . - 0 MSMEG_2981 MSMEG_2981 branched-chain amino acid ABC-type transport system, permease component identified by match to protein family HMM PF02653 A0QWL2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3046939 3048207 . - 0 MSMEG_2982 MSMEG_2982 putative periplasmic binding protein identified by match to protein family HMM PF01094 A0QWL3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3048445 3048876 . + 0 MSMEG_2983 MSMEG_2983 conserved hypothetical protein A0QWL4 No unknown Rv2576c Rv2576c NC_008596.1 Mycobrowser_v3 CDS 3049055 3049870 . - 0 MSMEG_2984 MSMEG_2984 putative hydrolase identified by match to protein family HMM PF00561 A0QWL5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3049867 3051504 . - 0 MSMEG_2985 MSMEG_2985 fumarate hydratase class I, anaerobic identified by match to protein family HMM PF05681; match to protein family HMM PF05683; match to protein family HMM TIGR00722; match to protein family HMM TIGR00723 A0QWL6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3051501 3052844 . - 0 MSMEG_2986 MSMEG_2986 amidohydrolase, AtzE family protein identified by match to protein family HMM PF01425 A0QWL7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3053983 3054882 . - 0 MSMEG_2988 MSMEG_2988 carbon-nitrogen hydrolase family protein identified by match to protein family HMM PF00795 A0QWL8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3055061 3056095 . + 0 MSMEG_2989 MSMEG_2989 LacI family protein transcriptional regulator identified by match to protein family HMM PF00532 A0QWL9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3056145 3057179 . + 0 MSMEG_2990 MSMEG_2990 Fe-S protein, radical SAM family protein identified by match to protein family HMM PF04055 A0QWM0 No unknown Rv2578c Rv2578c NC_008596.1 Mycobrowser_v3 CDS 3057281 3058564 . + 0 MSMEG_2991 MSMEG_2991 permease of the major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00710 A0QWM1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3103991 3104725 . + 0 MSMEG_3031 MSMEG_3031 shikimate kinase identified by match to protein family HMM PF01202 A0QWR0 No unknown Rv2539c Rv2539c NC_008596.1 Mycobrowser_v3 CDS 3058595 3059857 . - 0 MSMEG_2992 MSMEG_2992 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0QWM2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3059854 3060993 . - 0 MSMEG_2993 MSMEG_2993 acyl-CoA dehydrogenase, C- domain protein identified by match to protein family HMM PF00441; match to protein family HMM PF02771 A0QWM3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3061057 3062286 . - 0 MSMEG_2994 MSMEG_2994 amidohydrolase family protein identified by match to protein family HMM PF04909 A0QWM4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3062374 3063033 . - 0 MSMEG_2995 MSMEG_2995 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QWM5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3063126 3063980 . + 0 MSMEG_2996 MSMEG_2996 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QWM6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3063977 3064876 . + 0 MSMEG_2997 MSMEG_2997 conserved hypothetical protein A0QWM7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3065438 3067063 . - 0 MSMEG_2999 MSMEG_2999 conserved protein identified by match to protein family HMM PF05960 A0QWM9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3067056 3067949 . - 0 MSMEG_3000 MSMEG_3000 metallopeptidase, zinc binding identified by match to protein family HMM PF04228 A0QWN0 No unknown Rv2575 Rv2575 NC_008596.1 Mycobrowser_v3 CDS 3068022 3069497 . + 0 MSMEG_3002 MSMEG_3002 para-nitrobenzyl esterase identified by match to protein family HMM PF00135 A0QWN1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3069494 3070009 . - 0 MSMEG_3001 MSMEG_3001 conserved hypothetical protein A0QWN2 No unknown Rv2574 Rv2574 NC_008596.1 Mycobrowser_v3 CDS 3070138 3071934 . + 0 MSMEG_3003 aspS aspartyl-tRNA synthetase identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF01336; match to protein family HMM PF02938; match to protein family HMM TIGR00459 A0QWN3 No unknown Rv2572c Rv2572c NC_008596.1 Mycobrowser_v3 CDS 3071978 3072433 . + 0 MSMEG_3004 MSMEG_3004 conserved hypothetical protein TIGR00026 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0QWN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3072435 3073382 . - 0 MSMEG_3005 MSMEG_3005 hydroxyacyl-CoA dehydrogenase identified by match to protein family HMM PF00725; match to protein family HMM PF02737 A0QWN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3441941 3442687 . - 0 MSMEG_3371 MSMEG_3371 short-chain dehydrogenase/reductase SDR; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error; identified by match to protein family HMM PF00106 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3073373 3074650 . - 0 MSMEG_3006 MSMEG_3006 Fe-dependent alcohol dehydrogenase identified by match to protein family HMM PF00465 A0QWN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3074647 3076152 . - 0 MSMEG_3007 MSMEG_3007 succinate-semialdehyde dehydrogenase identified by match to protein family HMM PF00171 A0QWN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3076326 3078044 . + 0 MSMEG_3008 MSMEG_3008 putative sigma 54 type regulator identified by match to protein family HMM PF01590; match to protein family HMM PF02954 A0QWN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3078062 3078793 . - 0 MSMEG_3009 MSMEG_3009 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase identified by match to protein family HMM PF00106 A0QWN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3078871 3079857 . + 0 MSMEG_3010 MSMEG_3010 acetyl-hydrolase identified by match to protein family HMM PF07859 A0QWP0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3096393 3096782 . + 0 MSMEG_3024 MSMEG_3024 conserved hypothetical protein identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149 A0QWQ3 No unknown Rv2556c Rv2556c NC_008596.1 Mycobrowser_v3 CDS 3079874 3081520 . + 0 MSMEG_3011 MSMEG_3011 steroid monooxygenase identified by match to protein family HMM PF01266 A0QWP1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3081596 3082780 . - 0 MSMEG_3012 MSMEG_3012 acetyl-CoA acetyltransferases identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0QWP2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3082878 3083348 . + 0 MSMEG_3013 MSMEG_3013 putative transcriptional regulator family protein identified by match to protein family HMM PF01638 A0QWP3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3084783 3088091 . + 0 MSMEG_3016 MSMEG_3016 conserved hypothetical protein identified by match to protein family HMM PF01841 A0QWP6 No unknown Rv2566 Rv2566 NC_008596.1 Mycobrowser_v3 CDS 3132768 3133439 . + 0 MSMEG_3060 MSMEG_3060 conserved hypothetical protein identified by match to protein family HMM PF07947 A0QWT8 No unknown Rv1401 Rv1401 NC_008596.1 Mycobrowser_v3 CDS 3088091 3090805 . + 0 MSMEG_3017 MSMEG_3017 conserved hypothetical protein identified by match to protein family HMM PF04168; match to protein family HMM PF04169; match to protein family HMM PF04174 A0QWP7 No unknown Rv2567 Rv2567 NC_008596.1 Mycobrowser_v3 CDS 3090802 3091722 . + 0 MSMEG_3018 MSMEG_3018 transglutaminase domain protein identified by match to protein family HMM PF01841 A0QWP8 No unknown Rv2569c Rv2569c NC_008596.1 Mycobrowser_v3 CDS 3091715 3092743 . + 0 MSMEG_3019 MSMEG_3019 conserved hypothetical protein A0QWP9 No unknown Rv2568c Rv2568c NC_008596.1 Mycobrowser_v3 CDS 3092925 3093758 . + 0 MSMEG_3020 MSMEG_3020 conserved hypothetical protein A0QWQ0 No unknown Rv2033c Rv2033c NC_008596.1 Mycobrowser_v3 CDS 3093797 3095140 . + 0 MSMEG_3021 MSMEG_3021 AAA ATPase, central region identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF07728 A0QWQ1 No unknown Rv2559c Rv2559c NC_008596.1 Mycobrowser_v3 CDS 3095235 3095540 . - 0 MSMEG_3022 MSMEG_3022 transglycosylase associated protein A0QWQ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3096983 3099673 . + 0 MSMEG_3025 alaS alanyl-tRNA synthetase identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344 A0QWQ4 No unknown Rv2555c Rv2555c NC_008596.1 Mycobrowser_v3 CDS 3099680 3100192 . + 0 MSMEG_3026 MSMEG_3026 conserved hypothetical protein identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250 A0QWQ5 No unknown Rv2554c Rv2554c NC_008596.1 Mycobrowser_v3 CDS 3100185 3101429 . + 0 MSMEG_3027 MSMEG_3027 conserved hypothetical protein identified by match to protein family HMM PF02618 A0QWQ6 No unknown Rv2553c Rv2553c NC_008596.1 Mycobrowser_v3 CDS 3101419 3102249 . + 0 MSMEG_3028 aroE shikimate-5-dehydrogenase identified by match to protein family HMM PF01488; match to protein family HMM TIGR01809 A0QWQ7 No unknown Rv2552c Rv2552c NC_008596.1 Mycobrowser_v3 CDS 3102259 3102702 . + 0 MSMEG_3029 MSMEG_3029 peptidase, A24 (type IV prepilin peptidase) family protein identified by match to protein family HMM PF01478 A0QWQ8 No unknown Rv2551c Rv2551c NC_008596.1 Mycobrowser_v3 CDS 3102792 3103991 . + 0 MSMEG_3030 aroC chorismate synthase identified by match to protein family HMM PF01264; match to protein family HMM TIGR00033 A0QWQ9 No unknown Rv2540c Rv2540c NC_008596.1 Mycobrowser_v3 CDS 3470412 3471556 . + 0 MSMEG_3399 MSMEG_3399 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3104730 3105851 . + 0 MSMEG_3033 aroB 3-dehydroquinate synthase identified by match to protein family HMM PF01761; match to protein family HMM TIGR01357 A0QWR1 No unknown Rv2538c Rv2538c NC_008596.1 Mycobrowser_v3 CDS 3105842 3106417 . - 0 MSMEG_3032 MSMEG_3032 conserved hypothetical protein A0QWR2 No unknown Rv2536 Rv2536 NC_008596.1 Mycobrowser_v3 CDS 3106451 3107587 . + 0 MSMEG_3034 MSMEG_3034 metallopeptidase, M24 family protein identified by match to protein family HMM PF00557 A0QWR3 No unknown Rv2535c Rv2535c NC_008596.1 Mycobrowser_v3 CDS 3107613 3108176 . + 0 MSMEG_3035 efp translation elongation factor P identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM TIGR00038 A0QWR4 No unknown Rv2534c Rv2534c NC_008596.1 Mycobrowser_v3 CDS 3108169 3108651 . + 0 MSMEG_3036 nusB transcription antitermination factor NusB identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951 A0QWR5 No unknown Rv2533c Rv2533c NC_008596.1 Mycobrowser_v3 CDS 3111781 3112989 . - 0 MSMEG_3039 MSMEG_3039 monooxygenase identified by match to protein family HMM PF01266; match to protein family HMM PF01494 A0QWR7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3113057 3114259 . - 0 MSMEG_3040 MSMEG_3040 beta-lactamase identified by match to protein family HMM PF00144 A0QWR8 No unknown Rv1367c Rv1367c NC_008596.1 Mycobrowser_v3 CDS 3114301 3114978 . - 0 MSMEG_3041 MSMEG_3041 thiopurine S-methyltransferase (tpmt) superfamily protein identified by match to protein family HMM PF03848; match to protein family HMM PF05724 A0QWR9 No unknown Rv1377c Rv1377c NC_008596.1 Mycobrowser_v3 CDS 3115075 3115632 . + 0 MSMEG_3042 MSMEG_3042 PyrR bifunctional protein identified by match to protein family HMM PF00156 A0QWS0 No unknown Rv1379 Rv1379 NC_008596.1 Mycobrowser_v3 CDS 3115629 3116585 . + 0 MSMEG_3043 pyrB aspartate carbamoyltransferase identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670 A0QWS1 No unknown Rv1380 Rv1380 NC_008596.1 Mycobrowser_v3 CDS 3116582 3117916 . + 0 MSMEG_3044 MSMEG_3044 dihydroorotase identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR00857 A0QWS2 No unknown Rv1381 Rv1381 NC_008596.1 Mycobrowser_v3 CDS 3118410 3119558 . + 0 MSMEG_3046 carA carbamoyl-phosphate synthase, small subunit identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368 A0QWS4 No unknown Rv1383 Rv1383 NC_008596.1 Mycobrowser_v3 CDS 3147737 3148219 . - 0 MSMEG_3075 MSMEG_3075 acetyltransferase, GNAT family protein identified by similarity to GB:AAK38651.1; match to protein family HMM PF00583 A0QWV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3119664 3123011 . + 0 MSMEG_3047 carB carbamoyl-phosphate synthase, large subunit identified by match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02655; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369 A0QWS5 No unknown Rv1384 Rv1384 NC_008596.1 Mycobrowser_v3 CDS 3123008 3123838 . + 0 MSMEG_3048 pyrF orotidine 5'-phosphate decarboxylase identified by match to protein family HMM PF00215; match to protein family HMM TIGR02127 O08323 No unknown Rv1385 Rv1385 NC_008596.1 Mycobrowser_v3 CDS 3124455 3124661 . - 0 MSMEG_3049 MSMEG_3049 hypothetical protein identified by Glimmer2; putative A0QWS7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3124973 3125290 . + 0 MSMEG_3050 MSMEG_3050 integration host factor A0QWS8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3125301 3125903 . + 0 MSMEG_3051 MSMEG_3051 guanylate kinase identified by match to protein family HMM PF00625 A0QWS9 No unknown Rv1389 Rv1389 NC_008596.1 Mycobrowser_v3 CDS 3125908 3126033 . - 0 MSMEG_3052 MSMEG_3052 hypothetical protein identified by Glimmer2; putative A0QWT0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3126019 3126342 . + 0 MSMEG_3053 rpoZ DNA-directed RNA polymerase, omega subunit identified by match to protein family HMM TIGR00690 A0QWT1 No unknown Rv1390 Rv1390 NC_008596.1 Mycobrowser_v3 CDS 3226161 3226970 . + 0 MSMEG_3151 MSMEG_3151 [NADH] enoyl-[acyl-carrier-protein] reductase A0QX20,P42829 No unknown Rv1484 Rv1484 NC_008596.1 Mycobrowser_v3 CDS 3126361 3127605 . + 0 MSMEG_3054 coaBC phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521 A0QWT2 No unknown Rv1391 Rv1391 NC_008596.1 Mycobrowser_v3 CDS 3127746 3128945 . + 0 MSMEG_3055 metK S-adenosylmethionine synthetase identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034 A0QWT3 No unknown Rv1392 Rv1392 NC_008596.1 Mycobrowser_v3 CDS 3129093 3130088 . + 0 MSMEG_3056 MSMEG_3056 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0QWT4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3130085 3130825 . + 0 MSMEG_3057 MSMEG_3057 ABC-type metal ion transport system, permease component identified by match to protein family HMM PF00528 A0QWT5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3130870 3131709 . + 0 MSMEG_3058 MSMEG_3058 lipoprotein, nlpa family protein identified by match to protein family HMM PF03180 A0QWT6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3131786 3132673 . - 0 MSMEG_3059 MSMEG_3059 esterase identified by match to protein family HMM PF07859 A0QWT7 No unknown Rv1400c Rv1400c NC_008596.1 Mycobrowser_v3 CDS 3248071 3248559 . - 0 MSMEG_3171 MSMEG_3171 conserved hypothetical protein A0QX49 No unknown NC_008596.1 Mycobrowser_v3 CDS 3133436 3135436 . + 0 MSMEG_3061 priA primosomal protein N' identified by match to protein family HMM TIGR00595 A0QWT9 No unknown Rv1402 Rv1402 NC_008596.1 Mycobrowser_v3 CDS 3135497 3137305 . + 0 MSMEG_3062 MSMEG_3062 conserved hypothetical protein A0QWU0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3137299 3137835 . + 0 MSMEG_3063 MSMEG_3063 LemA protein identified by match to protein family HMM PF04011 A0QWU1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3137866 3138804 . + 0 MSMEG_3064 fmt methionyl-tRNA formyltransferase identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460 A0QWU2 No unknown Rv1406 Rv1406 NC_008596.1 Mycobrowser_v3 CDS 3138801 3140195 . + 0 MSMEG_3065 sun ribosomal RNA small subunit methyltransferase B identified by match to protein family HMM PF01029; match to protein family HMM PF01189 A0QWU3 No unknown Rv1407 Rv1407 NC_008596.1 Mycobrowser_v3 CDS 3140241 3140918 . + 0 MSMEG_3066 rpe ribulose-phosphate 3-epimerase identified by similarity to SP:P46969; match to protein family HMM PF00834; match to protein family HMM TIGR01163 A0QWU4 No unknown Rv1408 Rv1408 NC_008596.1 Mycobrowser_v3 CDS 3140915 3141922 . + 0 MSMEG_3067 ribD riboflavin biosynthesis protein RibD identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00326 A0QWU5 No unknown Rv1409 Rv1409 NC_008596.1 Mycobrowser_v3 CDS 3142059 3142244 . + 0 MSMEG_3068 MSMEG_3068 hypothetical protein identified by Glimmer2; putative A0QWU6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3142257 3143939 . - 0 MSMEG_3069 MSMEG_3069 aminoglycosides/tetracycline-transport integral membrane protein identified by match to protein family HMM PF07690 A0QWU7 No unknown Rv1410c Rv1410c NC_008596.1 Mycobrowser_v3 CDS 3143957 3144667 . - 0 MSMEG_3070 MSMEG_3070 LprG protein identified by match to protein family HMM PF07161 A0QWU8 No unknown Rv1411c Rv1411c NC_008596.1 Mycobrowser_v3 CDS 3144739 3145338 . + 0 MSMEG_3071 ribE riboflavin synthase, alpha subunit identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187 A0QWU9 No unknown Rv1412 Rv1412 NC_008596.1 Mycobrowser_v3 CDS 3145459 3146778 . + 0 MSMEG_3072 MSMEG_3072 riboflavin biosynthesis protein ribAB identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00505; match to protein family HMM TIGR00506 A0QWV0 No unknown Rv1415 Rv1415 NC_008596.1 Mycobrowser_v3 CDS 3146775 3147251 . + 0 MSMEG_3073 ribE 6,7-dimethyl-8-ribityllumazine synthase identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114 A0QWV1 No unknown Rv1416 Rv1416 NC_008596.1 Mycobrowser_v3 CDS 3147248 3147721 . + 0 MSMEG_3074 MSMEG_3074 conserved hypothetical protein A0QWV2 No unknown Rv1417 Rv1417 NC_008596.1 Mycobrowser_v3 CDS 3148216 3150126 . - 0 MSMEG_3076 ggt gamma-glutamyltransferase identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066 A0QWV4 No unknown Rv2394 Rv2394 NC_008596.1 Mycobrowser_v3 CDS 3150120 3150308 . - 0 MSMEG_3077 MSMEG_3077 hypothetical protein identified by Glimmer2; putative A0QWV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3150228 3152348 . + 0 MSMEG_3078 uvrC excinuclease ABC, C subunit identified by match to protein family HMM PF00633; match to protein family HMM PF01541; match to protein family HMM PF02151; match to protein family HMM TIGR00194 A0QWV6 No unknown Rv1420 Rv1420 NC_008596.1 Mycobrowser_v3 CDS 3286673 3287293 . + 0 MSMEG_3207 hisB imidazoleglycerol-phosphate dehydratase identified by match to protein family HMM PF00475 A0QX83 No unknown Rv1601 Rv1601 NC_008596.1 Mycobrowser_v3 CDS 3152446 3153321 . + 0 MSMEG_3079 MSMEG_3079 conserved hypothetical protein identified by match to protein family HMM PF03668 A0QWV7 No unknown Rv1421 Rv1421 NC_008596.1 Mycobrowser_v3 CDS 3153318 3154382 . + 0 MSMEG_3080 MSMEG_3080 conserved hypothetical protein identified by match to protein family HMM PF01933; match to protein family HMM TIGR01826 A0QWV8 No unknown Rv1422 Rv1422 NC_008596.1 Mycobrowser_v3 CDS 3154391 3155356 . + 0 MSMEG_3081 MSMEG_3081 conserved hypothetical protein identified by match to protein family HMM PF02650; match to protein family HMM TIGR00647 A0QWV9 No unknown Rv1423 Rv1423 NC_008596.1 Mycobrowser_v3 CDS 3155445 3155837 . + 0 MSMEG_3082 MSMEG_3082 soul heme-binding protein A0QWW0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3155827 3157173 . + 0 MSMEG_3083 MSMEG_3083 nucleoside-diphosphate sugar epimerase identified by match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777 A0QWW1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3157277 3158299 . + 0 MSMEG_3084 gap glyceraldehyde-3-phosphate dehydrogenase, type I identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534 A0QWW2 No unknown Rv1436 Rv1436 NC_008596.1 Mycobrowser_v3 CDS 3158305 3159531 . + 0 MSMEG_3085 pgk phosphoglycerate kinase identified by match to protein family HMM PF00162 A0QWW3 No unknown Rv1437 Rv1437 NC_008596.1 Mycobrowser_v3 CDS 3159535 3160320 . + 0 MSMEG_3086 tpiA triosephosphate isomerase identified by similarity to SP:P27876; match to protein family HMM PF00121; match to protein family HMM TIGR00419 A0QWW4 No unknown Rv1438 Rv1438 NC_008596.1 Mycobrowser_v3 CDS 3160365 3160601 . + 0 MSMEG_3087 secG preprotein translocase, SecG subunit identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810 A0QWW5 No unknown Rv1440 Rv1440 NC_008596.1 Mycobrowser_v3 CDS 3161830 3162525 . - 0 MSMEG_3089 deoC deoxyribose-phosphate aldolase identified by match to protein family HMM PF01791; match to protein family HMM TIGR00126 A0QWW6 No unknown Rv0478 Rv0478 NC_008596.1 Mycobrowser_v3 CDS 3248591 3249553 . - 0 MSMEG_3173 MSMEG_3173 L-asparaginase identified by match to protein family HMM PF00710 A0QX50 No unknown Rv1538c Rv1538c NC_008596.1 Mycobrowser_v3 CDS 3162550 3163551 . - 0 MSMEG_3090 MSMEG_3090 ribose transport system permease protein RbsC identified by match to protein family HMM PF02653 A0QWW7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3163544 3165091 . - 0 MSMEG_3091 MSMEG_3091 ribose transport ATP-binding protein RbsA identified by match to protein family HMM PF00005 A0QWW8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3165093 3166037 . - 0 MSMEG_3092 MSMEG_3092 transcriptional regulator, sugar-binding family protein identified by match to protein family HMM PF04198 A0QWW9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3166037 3167596 . - 0 MSMEG_3093 MSMEG_3093 putative sugar kinase protein identified by match to protein family HMM PF00370; match to protein family HMM PF02782 A0QWX0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3167600 3168691 . - 0 MSMEG_3094 MSMEG_3094 oxidoreductase, zinc-binding dehydrogenase family protein identified by match to protein family HMM PF00107 A0QWX1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3168749 3169684 . - 0 MSMEG_3095 MSMEG_3095 D-ribose-binding periplasmic protein identified by match to protein family HMM PF00532 A0QWX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3169942 3172743 . + 0 MSMEG_3097 ppc phosphoenolpyruvate carboxylase identified by match to protein family HMM PF00311 A0QWX4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3172746 3173117 . - 0 MSMEG_3098 MSMEG_3098 conserved hypothetical protein A0QWX5 No unknown Rv1444c Rv1444c NC_008596.1 Mycobrowser_v3 CDS 3173171 3173905 . - 0 MSMEG_3099 pgl 6-phosphogluconolactonase identified by match to protein family HMM PF01182; match to protein family HMM TIGR01198 A0QWX6 No unknown Rv1445c Rv1445c NC_008596.1 Mycobrowser_v3 CDS 3173902 3174813 . - 0 MSMEG_3100 opcA OpcA protein identified by match to protein family HMM TIGR00534 A0QWX7 No unknown Rv1446c Rv1446c NC_008596.1 Mycobrowser_v3 CDS 3174830 3176380 . - 0 MSMEG_3101 zwf glucose-6-phosphate 1-dehydrogenase identified by match to protein family HMM PF00479; match to protein family HMM PF02781; match to protein family HMM TIGR00871 A0QWX8 No unknown Rv1447c Rv1447c NC_008596.1 Mycobrowser_v3 CDS 3176377 3177492 . - 0 MSMEG_3102 tal transaldolase identified by match to protein family HMM PF00923; match to protein family HMM TIGR00876 A0QWX9 No unknown Rv1448c Rv1448c NC_008596.1 Mycobrowser_v3 CDS 3177527 3179617 . - 0 MSMEG_3103 tkt transketolase identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232 A0QWY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3179681 3179839 . + 0 MSMEG_3104 MSMEG_3104 hypothetical protein identified by Glimmer2; putative A0QWY1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3179862 3180788 . + 0 MSMEG_3105 cyoE protoheme IX farnesyltransferase identified by match to protein family HMM PF01040; match to protein family HMM TIGR01473 A0QWY2 No unknown Rv1451 Rv1451 NC_008596.1 Mycobrowser_v3 CDS 3180841 3181869 . - 0 MSMEG_3106 MSMEG_3106 quinone oxidoreductase identified by match to protein family HMM PF00107 A0QWY3 No unknown Rv1454c Rv1454c NC_008596.1 Mycobrowser_v3 CDS 3181861 3182799 . + 0 MSMEG_3107 MSMEG_3107 conserved hypothetical protein A0QWY4 No unknown Rv1455 Rv1455 NC_008596.1 Mycobrowser_v3 CDS 3182812 3183879 . - 0 MSMEG_3108 MSMEG_3108 ABC transporter, ATPase subunit identified by match to protein family HMM PF00005 A0QWY5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3183900 3184715 . - 0 MSMEG_3109 MSMEG_3109 binding-protein-dependent transport systems inner membrane component identified by match to protein family HMM PF00528 A0QWY6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3184712 3185575 . - 0 MSMEG_3110 MSMEG_3110 binding-protein-dependent transport systems inner membrane component identified by match to protein family HMM PF00528 A0QWY7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3185616 3186944 . - 0 MSMEG_3111 MSMEG_3111 extracellular solute-binding protein, family protein 1 identified by match to protein family HMM PF01547 A0QWY8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3187000 3187794 . - 0 MSMEG_3112 MSMEG_3112 estradiol 17-beta-dehydrogenase 8 identified by match to protein family HMM PF00106 A0QWY9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3187791 3189278 . - 0 MSMEG_3113 MSMEG_3113 carbohydrate kinase, fggy identified by match to protein family HMM PF00370; match to protein family HMM PF02782 A0QWZ0 No unknown Rv0729 Rv0729 NC_008596.1 Mycobrowser_v3 CDS 3189456 3190271 . + 0 MSMEG_3114 MSMEG_3114 conserved hypothetical protein identified by match to protein family HMM PF03437; match to protein family HMM TIGR00259 A0QWZ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3190268 3191017 . + 0 MSMEG_3116 MSMEG_3116 inositol-1-monophosphatase identified by match to protein family HMM PF00459 A0QWZ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3191000 3191818 . - 0 MSMEG_3115 MSMEG_3115 regulatory protein, DeoR identified by match to protein family HMM PF00455; match to protein family HMM PF08220 A0QWZ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3191877 3192839 . - 0 MSMEG_3117 MSMEG_3117 cytochrome aa3 controlling protein identified by match to protein family HMM PF02628 A0QWZ4 No unknown Rv1456c Rv1456c NC_008596.1 Mycobrowser_v3 CDS 3192884 3193669 . - 0 MSMEG_3118 MSMEG_3118 ABC transporter efflux protein, DrrB family protein identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025 A0QWZ5 No unknown Rv1457c Rv1457c NC_008596.1 Mycobrowser_v3 CDS 3193666 3194634 . - 0 MSMEG_3119 MSMEG_3119 ABC transporter, ATP-binding subunit identified by match to protein family HMM PF00005 A0QWZ6 No unknown Rv1458c Rv1458c NC_008596.1 Mycobrowser_v3 CDS 3194631 3196310 . - 0 MSMEG_3120 MSMEG_3120 conserved hypothetical protein A0QWZ7 No unknown Rv1459c Rv1459c NC_008596.1 Mycobrowser_v3 CDS 3196382 3197227 . + 0 MSMEG_3121 MSMEG_3121 DNA-binding protein identified by match to protein family HMM PF01022 A0QWZ8 No unknown Rv1460 Rv1460 NC_008596.1 Mycobrowser_v3 CDS 3270784 3271461 . + 0 MSMEG_3190 bioD dethiobiotin synthase identified by match to protein family HMM TIGR00347 A0QX66 No unknown Rv1570 Rv1570 NC_008596.1 Mycobrowser_v3 CDS 3197224 3198657 . + 0 MSMEG_3122 sufB FeS assembly protein SufB identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980 A0QWZ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3198660 3199871 . + 0 MSMEG_3123 sufD FeS assembly protein SufD identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981 A0QX00 No unknown Rv1462 Rv1462 NC_008596.1 Mycobrowser_v3 CDS 3211820 3212194 . + 0 MSMEG_3138 trx thioredoxin identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068 A0QX15 No unknown Rv1471 Rv1471 NC_008596.1 Mycobrowser_v3 CDS 3199871 3200644 . + 0 MSMEG_3124 sufC FeS assembly ATPase SufC identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978 A0QX01 No unknown Rv1463 Rv1463 NC_008596.1 Mycobrowser_v3 CDS 3200647 3201891 . + 0 MSMEG_3125 MSMEG_3125 cysteine desulfurase identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979 A0QX02 No unknown Rv1464 Rv1464 NC_008596.1 Mycobrowser_v3 CDS 3201888 3202382 . + 0 MSMEG_3126 MSMEG_3126 SUF system FeS assembly protein, NifU family protein identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994 A0QX03 No unknown Rv1465 Rv1465 NC_008596.1 Mycobrowser_v3 CDS 3202379 3202720 . + 0 MSMEG_3127 MSMEG_3127 conserved protein, DUF59 identified by match to protein family HMM PF01883 A0QX04 No unknown Rv1466 Rv1466 NC_008596.1 Mycobrowser_v3 CDS 3202721 3203860 . - 0 MSMEG_3128 MSMEG_3128 hypothetical protein identified by Glimmer2; putative A0QX05 No unknown NC_008596.1 Mycobrowser_v3 CDS 3203857 3204447 . - 0 MSMEG_3129 MSMEG_3129 putative HTH-type transcriptional regulator identified by match to protein family HMM PF00440 A0QX06 No unknown NC_008596.1 Mycobrowser_v3 CDS 3204495 3204944 . - 0 MSMEG_3130 MSMEG_3130 hypothetical protein identified by Glimmer2; putative A0QX07 No unknown NC_008596.1 Mycobrowser_v3 CDS 3205123 3206757 . - 0 MSMEG_3131 MSMEG_3131 AMP-binding protein identified by match to protein family HMM PF00501 A0QX08 No unknown Rv1550 Rv1550 NC_008596.1 Mycobrowser_v3 CDS 3207089 3207892 . + 0 MSMEG_3132 MSMEG_3132 DNA-binding protein A0QX09 No unknown NC_008596.1 Mycobrowser_v3 CDS 3252280 3252924 . + 0 MSMEG_3177 MSMEG_3177 probable transcriptional regulatory protein, putative identified by match to protein family HMM PF00440 A0QX54 No unknown NC_008596.1 Mycobrowser_v3 CDS 3208009 3209274 . + 0 MSMEG_3134 MSMEG_3134 cytochrome P450 107B1 identified by match to protein family HMM PF00067 A0QX10 No unknown NC_008596.1 Mycobrowser_v3 CDS 3209187 3209825 . - 0 MSMEG_3133 MSMEG_3133 hypothetical protein identified by Glimmer2; putative A0QX11 No unknown NC_008596.1 Mycobrowser_v3 CDS 3209352 3209747 . + 0 MSMEG_3135 MSMEG_3135 hypothetical protein identified by Glimmer2; putative A0QX12 No unknown NC_008596.1 Mycobrowser_v3 CDS 3209887 3210606 . + 0 MSMEG_3136 MSMEG_3136 heme peroxidase superfamily protein A0QX13 No unknown NC_008596.1 Mycobrowser_v3 CDS 3271486 3271995 . + 0 MSMEG_3191 MSMEG_3191 conserved hypothetical protein A0QX67 No unknown Rv1571 Rv1571 NC_008596.1 Mycobrowser_v3 CDS 3210665 3211774 . + 0 MSMEG_3137 MSMEG_3137 oxidoreductase identified by match to protein family HMM PF00724 A0QX14 No unknown NC_008596.1 Mycobrowser_v3 CDS 3212249 3213070 . + 0 MSMEG_3139 MSMEG_3139 enoyl-CoA hydratase/isomerase identified by match to protein family HMM PF00378 A0QX16 No unknown Rv1472 Rv1472 NC_008596.1 Mycobrowser_v3 CDS 3213101 3214729 . + 0 MSMEG_3140 MSMEG_3140 ABC transporter ATP-binding protein, possibly in EF-3 subfamily protein identified by match to protein family HMM PF00005 A0QX17 No unknown Rv1473 Rv1473 NC_008596.1 Mycobrowser_v3 CDS 3214859 3215056 . + 0 MSMEG_3141 MSMEG_3141 conserved domain protein A0QX18 No unknown Rv1473A Rv1473A NC_008596.1 Mycobrowser_v3 CDS 3215094 3215708 . - 0 MSMEG_3142 MSMEG_3142 HTH-type transcriptional repressor AcnR identified by match to protein family HMM PF00440 A0QX19 No unknown Rv1474c Rv1474c NC_008596.1 Mycobrowser_v3 CDS 3215760 3218591 . - 0 MSMEG_3143 acnA aconitate hydratase 1 identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01341 A0QX20 No unknown Rv1475c Rv1475c NC_008596.1 Mycobrowser_v3 CDS 3218854 3219456 . + 0 MSMEG_3144 MSMEG_3144 putative membrane protein A0QX21 No unknown Rv1476 Rv1476 NC_008596.1 Mycobrowser_v3 CDS 3485603 3485981 . + 0 MSMEG_3413 MSMEG_3413 MerR-family transcriptional regulator; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00376 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3219661 3221154 . + 0 MSMEG_3145 MSMEG_3145 secreted cell wall-associated hydrolase identified by match to protein family HMM PF00877 A0QX22 No unknown Rv1477 Rv1477 NC_008596.1 Mycobrowser_v3 CDS 3221174 3221863 . + 0 MSMEG_3146 MSMEG_3146 invasin 1 identified by match to protein family HMM PF00877 A0QX23 No unknown Rv1478 Rv1478 NC_008596.1 Mycobrowser_v3 CDS 3222173 3223219 . + 0 MSMEG_3147 moxR ATPase, MoxR family protein identified by match to protein family HMM PF07726; match to protein family HMM PF07728 A0QX24 No unknown Rv1479 Rv1479 NC_008596.1 Mycobrowser_v3 CDS 3223216 3224163 . + 0 MSMEG_3148 MSMEG_3148 conserved hypothetical protein A0QX25 No unknown Rv1480 Rv1480 NC_008596.1 Mycobrowser_v3 CDS 3224240 3225223 . + 0 MSMEG_3149 MSMEG_3149 conserved hypothetical protein identified by match to protein family HMM PF00092 A0QX26 No unknown Rv1481 Rv1481 NC_008596.1 Mycobrowser_v3 CDS 3225346 3226113 . + 0 MSMEG_3150 fabG 3-oxoacyl-(acyl-carrier-protein) reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR01830 P71534 No unknown Rv1483 Rv1483 NC_008596.1 Mycobrowser_v3 CDS 3226977 3227999 . + 0 MSMEG_3152 hemH ferrochelatase identified by match to protein family HMM PF00762; match to protein family HMM TIGR00109 A0QX29 No unknown Rv1485 Rv1485 NC_008596.1 Mycobrowser_v3 CDS 3228033 3228908 . - 0 MSMEG_3153 MSMEG_3153 conserved hypothetical protein A0QX30 No unknown Rv1486c Rv1486c NC_008596.1 Mycobrowser_v3 CDS 3228967 3229401 . + 0 MSMEG_3154 MSMEG_3154 membrane protein implicated in regulation of membrane protease activity identified by match to protein family HMM PF01957 A0QX31 No unknown Rv1487 Rv1487 NC_008596.1 Mycobrowser_v3 CDS 3229445 3230671 . + 0 MSMEG_3155 MSMEG_3155 band 7 protein identified by match to protein family HMM PF01145 A0QX32 No unknown Rv1488 Rv1488 NC_008596.1 Mycobrowser_v3 CDS 3230729 3231052 . + 0 MSMEG_3156 MSMEG_3156 conserved hypothetical protein A0QX33 No unknown Rv1489 Rv1489 NC_008596.1 Mycobrowser_v3 CDS 3231067 3231804 . - 0 MSMEG_3157 MSMEG_3157 conserved hypothetical protein A0QX34 No unknown Rv1491c Rv1491c NC_008596.1 Mycobrowser_v3 CDS 3231961 3233832 . + 0 MSMEG_3158 mutA methylmalonyl-CoA mutase, small subunit identified by match to protein family HMM PF01642; match to protein family HMM TIGR00642 A0QX35 No unknown Rv1492 Rv1492 NC_008596.1 Mycobrowser_v3 CDS 3249596 3250303 . + 0 MSMEG_3174 MSMEG_3174 lipoprotein signal peptidase identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077 A0QX51 No unknown Rv1539 Rv1539 NC_008596.1 Mycobrowser_v3 CDS 3297046 3297864 . + 0 MSMEG_3219 trpC indole-3-glycerol phosphate synthase identified by match to protein family HMM PF00218 A0QX95 No unknown Rv1611 Rv1611 NC_008596.1 Mycobrowser_v3 CDS 3233834 3236089 . + 0 MSMEG_3159 MSMEG_3159 methylmalonyl-CoA mutase large subunit identified by match to protein family HMM PF01642; match to protein family HMM PF02310; match to protein family HMM TIGR00640; match to protein family HMM TIGR00641 A0QX36 No unknown Rv1493 Rv1493 NC_008596.1 Mycobrowser_v3 CDS 3236097 3237074 . + 0 MSMEG_3160 MSMEG_3160 LAO/AO transport system ATPase identified by match to protein family HMM PF03308; match to protein family HMM TIGR00750 A0QX37 No unknown Rv1496 Rv1496 NC_008596.1 Mycobrowser_v3 CDS 3237127 3237477 . + 0 MSMEG_3161 MSMEG_3161 conserved hypothetical protein A0QX38 No unknown NC_008596.1 Mycobrowser_v3 CDS 3237553 3238818 . + 0 MSMEG_3162 MSMEG_3162 beta-lactamase identified by match to protein family HMM PF00144 A0QX39 No unknown Rv1497 Rv1497 NC_008596.1 Mycobrowser_v3 CDS 3238864 3239595 . - 0 MSMEG_3163 MSMEG_3163 gp55 protein A0QX40 No unknown NC_008596.1 Mycobrowser_v3 CDS 3239637 3239999 . - 0 MSMEG_3164 MSMEG_3164 hypothetical protein identified by Glimmer2; putative A0QX41 No unknown NC_008596.1 Mycobrowser_v3 CDS 3596576 3597016 . + 0 MSMEG_3534 MSMEG_3534 4-hydroxybenzoyl-CoA thioesterase identified by match to protein family HMM PF03061 A0QY49 No unknown NC_008596.1 Mycobrowser_v3 CDS 3240241 3240942 . + 0 MSMEG_3165 MSMEG_3165 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3272008 3272769 . + 0 MSMEG_3192 MSMEG_3192 conserved hypothetical protein, putative identified by match to protein family HMM TIGR03083 A0QX68,A4ZHS7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3240950 3242272 . - 0 MSMEG_3166 MSMEG_3166 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3241991 3242389 . + 0 MSMEG_3167 MSMEG_3167 hypothetical protein identified by Glimmer2; putative A0QX44 No unknown NC_008596.1 Mycobrowser_v3 CDS 3242433 3242996 . + 0 MSMEG_3168 MSMEG_3168 phenolpthIocerol synthesis type-i polyketide synthase ppse A0QX45 No unknown NC_008596.1 Mycobrowser_v3 CDS 3243269 3246391 . + 0 MSMEG_3169 ileS isoleucyl-tRNA synthetase identified by match to protein family HMM PF00133; match to protein family HMM TIGR00392 A0QX46 No unknown Rv1536 Rv1536 NC_008596.1 Mycobrowser_v3 CDS 3246446 3246664 . - 0 MSMEG_3170 MSMEG_3170 conserved domain protein identified by match to protein family HMM PF01479 A0QX47 No unknown NC_008596.1 Mycobrowser_v3 CDS 3246698 3248089 . + 0 MSMEG_3172 MSMEG_3172 DNA polymerase IV 1 identified by match to protein family HMM PF00817 A0QX48 No unknown Rv1537 Rv1537 NC_008596.1 Mycobrowser_v3 CDS 3250303 3251232 . + 0 MSMEG_3175 MSMEG_3175 ribosomal large subunit pseudouridine synthase D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005 A0QX52 No unknown Rv1540 Rv1540 NC_008596.1 Mycobrowser_v3 CDS 3251229 3252143 . + 0 MSMEG_3176 rarD RarD protein identified by match to protein family HMM PF00892; match to protein family HMM TIGR00688 A0QX53 No unknown NC_008596.1 Mycobrowser_v3 CDS 3272770 3273387 . - 0 MSMEG_3193 MSMEG_3193 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440; match to protein family HMM PF02909 A0QX69 No unknown NC_008596.1 Mycobrowser_v3 CDS 3273453 3274514 . + 0 MSMEG_3194 bioB biotin synthase identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433 A0QX70 No unknown Rv1589 Rv1589 NC_008596.1 Mycobrowser_v3 CDS 3274521 3274763 . + 0 MSMEG_3195 MSMEG_3195 conserved hypothetical protein A0QX71 No unknown Rv1590 Rv1590 NC_008596.1 Mycobrowser_v3 CDS 3287922 3288698 . + 0 MSMEG_3209 MSMEG_3209 bifunctional HisA/TrpF protein identified by match to protein family HMM PF00977; match to protein family HMM TIGR01919 A0QX85 No unknown Rv1603 Rv1603 NC_008596.1 Mycobrowser_v3 CDS 3253007 3256561 . + 0 MSMEG_3178 MSMEG_3178 DNA polymerase III alpha subunit identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594 A0QX55 No unknown Rv1547 Rv1547 NC_008596.1 Mycobrowser_v3 CDS 3256584 3257036 . - 0 MSMEG_3179 MSMEG_3179 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0QX56 No unknown NC_008596.1 Mycobrowser_v3 CDS 3257094 3257483 . + 0 MSMEG_3180 MSMEG_3180 transcriptional regulator, MerR family protein identified by match to protein family HMM PF00376 A0QX57 No unknown NC_008596.1 Mycobrowser_v3 CDS 3257504 3257905 . + 0 MSMEG_3181 MSMEG_3181 conserved hypothetical protein A0QX58 No unknown NC_008596.1 Mycobrowser_v3 CDS 3257923 3258243 . + 0 MSMEG_3182 MSMEG_3182 hypothetical protein identified by Glimmer2; putative A0QX59 No unknown NC_008596.1 Mycobrowser_v3 CDS 3258382 3259674 . + 0 MSMEG_3183 ilvA threonine dehydratase identified by match to protein family HMM PF00291; match to protein family HMM PF00585; match to protein family HMM TIGR02079 A0QX60 No unknown Rv1559 Rv1559 NC_008596.1 Mycobrowser_v3 CDS 3259770 3261521 . - 0 MSMEG_3184 treZ malto-oligosyltrehalose trehalohydrolase identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402 A0QX61 No unknown Rv1562c Rv1562c NC_008596.1 Mycobrowser_v3 CDS 3283047 3283682 . - 0 MSMEG_3203 MSMEG_3203 transporter, LysE family protein identified by match to protein family HMM PF01810 A0QX79 No unknown NC_008596.1 Mycobrowser_v3 CDS 3263798 3265954 . - 0 MSMEG_3186 glgX glycogen debranching enzyme GlgX identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100 A0QX62 No unknown Rv1564c Rv1564c NC_008596.1 Mycobrowser_v3 CDS 3285537 3286676 . + 0 MSMEG_3206 hisC histidinol-phosphate aminotransferase identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141 A0QX82 No unknown Rv1600 Rv1600 NC_008596.1 Mycobrowser_v3 CDS 3265959 3268118 . - 0 MSMEG_3187 MSMEG_3187 putative acyltransferase domain protein identified by match to protein family HMM PF01757 A0QX63 No unknown Rv1565c Rv1565c NC_008596.1 Mycobrowser_v3 CDS 3301936 3302223 . + 0 MSMEG_3223 MSMEG_3223 TM2 domain protein identified by match to protein family HMM PF05154 A0QX99 No unknown Rv1615 Rv1615 NC_008596.1 Mycobrowser_v3 CDS 3268212 3269510 . + 0 MSMEG_3188 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase identified by match to protein family HMM PF00202; match to protein family HMM TIGR00508 A0QX64 No unknown Rv1568 Rv1568 NC_008596.1 Mycobrowser_v3 CDS 3269639 3270787 . + 0 MSMEG_3189 bioF 8-amino-7-oxononanoate synthase identified by match to protein family HMM PF00155; match to protein family HMM PF00202; match to protein family HMM PF00266; match to protein family HMM TIGR00858 A0QX65 No unknown Rv1569 Rv1569 NC_008596.1 Mycobrowser_v3 CDS 3274778 3275455 . + 0 MSMEG_3196 MSMEG_3196 conserved hypothetical protein A0QX72 No unknown Rv1591 Rv1591 NC_008596.1 Mycobrowser_v3 CDS 3275485 3276816 . - 0 MSMEG_3197 MSMEG_3197 lipase identified by match to protein family HMM PF03583 A0QX73 No unknown Rv1592c Rv1592c NC_008596.1 Mycobrowser_v3 CDS 3276859 3277524 . - 0 MSMEG_3198 MSMEG_3198 hydrolase, NUDIX family protein identified by match to protein family HMM PF00293 A0QX74 No unknown Rv1593c Rv1593c NC_008596.1 Mycobrowser_v3 CDS 3277598 3278641 . + 0 MSMEG_3199 nadA quinolinate synthetase complex, A subunit identified by match to protein family HMM PF02445; match to protein family HMM TIGR00550 A0QX75 No unknown Rv1594 Rv1594 NC_008596.1 Mycobrowser_v3 CDS 3278638 3280233 . + 0 MSMEG_3200 nadB L-aspartate oxidase identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR00551 A0QX76 No unknown Rv1595 Rv1595 NC_008596.1 Mycobrowser_v3 CDS 3280227 3281093 . + 0 MSMEG_3201 nadC nicotinate-nucleotide pyrophosphorylase identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078 A0QX77 No unknown Rv1596 Rv1596 NC_008596.1 Mycobrowser_v3 CDS 3281139 3282659 . - 0 MSMEG_3202 MSMEG_3202 hypothetical protein identified by Glimmer2; putative A0QX78 No unknown Rv0124 Rv0124 NC_008596.1 Mycobrowser_v3 CDS 3283704 3284072 . - 0 MSMEG_3204 MSMEG_3204 conserved hypothetical protein identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0QX80 No unknown Rv1598c Rv1598c NC_008596.1 Mycobrowser_v3 CDS 3284200 3285537 . + 0 MSMEG_3205 hisD histidinol dehydrogenase identified by match to protein family HMM PF00815; match to protein family HMM TIGR00069 A0QX81 No unknown Rv1599 Rv1599 NC_008596.1 Mycobrowser_v3 CDS 2402237 2403963 . + 0 MSMEG_2320 ctaD cytochrome C oxidase subunit I; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3287290 3287907 . + 0 MSMEG_3208 hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit identified by match to protein family HMM PF00117; match to protein family HMM TIGR01855 A0QX84 No unknown Rv1602 Rv1602 NC_008596.1 Mycobrowser_v3 CDS 3288695 3289525 . + 0 MSMEG_3210 MSMEG_3210 inositol monophosphate phosphatase identified by match to protein family HMM PF00459 A0QX86 No unknown Rv1604 Rv1604 NC_008596.1 Mycobrowser_v3 CDS 3289522 3290307 . + 0 MSMEG_3211 hisF imidazoleglycerol phosphate synthase, cyclase subunit identified by match to protein family HMM PF00977; match to protein family HMM TIGR00735 A0QX87 No unknown Rv1605 Rv1605 NC_008596.1 Mycobrowser_v3 CDS 3290318 3290665 . + 0 MSMEG_3212 hisIE phosphoribosyl-AMP pyrophosphatase/phosphoribosyl-ATP cyclohydrolase identified by match to protein family HMM PF01502 A0QX88 No unknown Rv1606 Rv1606 NC_008596.1 Mycobrowser_v3 CDS 3290670 3292352 . + 0 MSMEG_3213 MSMEG_3213 conserved hypothetical protein A0QX89 No unknown Rv3263 Rv3263 NC_008596.1 Mycobrowser_v3 CDS 3292342 3293334 . + 0 MSMEG_3214 MSMEG_3214 hypothetical protein identified by Glimmer2; putative A0QX90 No unknown NC_008596.1 Mycobrowser_v3 CDS 3293342 3294139 . - 0 MSMEG_3215 MSMEG_3215 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA identified by match to protein family HMM PF00005 A0QX91 No unknown NC_008596.1 Mycobrowser_v3 CDS 3294257 3294721 . - 0 MSMEG_3216 MSMEG_3216 peroxiredoxin Q identified by match to protein family HMM PF00578 A0QX92 No unknown Rv1608c Rv1608c NC_008596.1 Mycobrowser_v3 CDS 3294784 3296358 . + 0 MSMEG_3217 trpE anthranilate synthase component I identified by match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00564 A0QX93 No unknown Rv1609 Rv1609 NC_008596.1 Mycobrowser_v3 CDS 3296355 3296969 . + 0 MSMEG_3218 MSMEG_3218 trp region conserved hypothetical membrane protein identified by match to protein family HMM TIGR02234 A0QX94 No unknown Rv1610 Rv1610 NC_008596.1 Mycobrowser_v3 CDS 3297900 3299177 . + 0 MSMEG_3220 trpB tryptophan synthase, beta subunit identified by match to protein family HMM PF00291; match to protein family HMM TIGR00263 A0QX96 No unknown Rv1612 Rv1612 NC_008596.1 Mycobrowser_v3 CDS 3299174 3299962 . + 0 MSMEG_3221 trpA tryptophan synthase, alpha subunit identified by match to protein family HMM PF00290; match to protein family HMM TIGR00262 A0QX97 No unknown Rv1613 Rv1613 NC_008596.1 Mycobrowser_v3 CDS 3316161 3317624 . - 0 MSMEG_3233 MSMEG_3233 cytochrome D ubiquinol oxidase subunit 1 identified by match to protein family HMM PF01654 A0QXA8 No unknown Rv1623c Rv1623c NC_008596.1 Mycobrowser_v3 CDS 3299959 3301809 . + 0 MSMEG_3222 MSMEG_3222 prolipoprotein diacylglyceryl transferase identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544 A0QX98 No unknown NC_008596.1 Mycobrowser_v3 CDS 3302712 3307268 . + 0 MSMEG_3225 MSMEG_3225 ferredoxin-dependent glutamate synthase 1 identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898 A0QXA1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3307261 3308763 . + 0 MSMEG_3226 MSMEG_3226 glutamate synthase, NADH/nadph, small subunit identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR01317 A0QXA2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3308803 3310221 . + 0 MSMEG_3227 pyk pyruvate kinase identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064 A0QXA3 No unknown Rv1617 Rv1617 NC_008596.1 Mycobrowser_v3 CDS 3310245 3311108 . + 0 MSMEG_3228 MSMEG_3228 acyl-CoA thioesterase II identified by match to protein family HMM PF02551 A0QXA4 No unknown Rv1618 Rv1618 NC_008596.1 Mycobrowser_v3 CDS 3311187 3311981 . - 0 MSMEG_3229 MSMEG_3229 conserved hypothetical protein A0QXA5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3313470 3314999 . - 0 MSMEG_3231 cydD ABC transporter, CydDC cysteine exporter (CydDC-E) family protein, permease/ATP-binding protein CydD identified by match to protein family HMM PF00005; match to protein family HMM TIGR02857 A0QXA6 No unknown Rv1621c Rv1621c NC_008596.1 Mycobrowser_v3 CDS 5650412 5650957 . - 0 MSMEG_5561 MSMEG_5561 HPP family protein identified by match to protein family HMM PF04982 A0R3Q9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3315095 3316147 . - 0 MSMEG_3232 cydB cytochrome D ubiquinol oxidase, subunit II identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203 A0QXA7 No unknown Rv1622c Rv1622c NC_008596.1 Mycobrowser_v3 CDS 3317720 3318295 . - 0 MSMEG_3234 MSMEG_3234 integral membrane protein identified by match to protein family HMM PF03729 A0QXA9 No unknown Rv1624c Rv1624c NC_008596.1 Mycobrowser_v3 CDS 3318528 3319415 . + 0 MSMEG_3235 MSMEG_3235 ABC-type amino acid transport system, secreted component identified by match to protein family HMM PF00497 A0QXB0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3677470 3678081 . - 0 MSMEG_3613 MSMEG_3613 conserved hypothetical protein identified by match to protein family HMM PF07336 A0QYC8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3319425 3320357 . + 0 MSMEG_3236 MSMEG_3236 ABC-type amino acid transport system, permease component identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 A0QXB1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3320354 3321139 . + 0 MSMEG_3237 MSMEG_3237 ATP-binding protein identified by match to protein family HMM PF00005 A0QXB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3321162 3322022 . + 0 MSMEG_3238 MSMEG_3238 3-mercaptopyruvate sulfurtransferase identified by match to protein family HMM PF00581 A0QXB3 No unknown Rv2291 Rv2291 NC_008596.1 Mycobrowser_v3 CDS 3322077 3323213 . + 0 MSMEG_3239 MSMEG_3239 two-component system sensor kinase identified by match to protein family HMM PF02518 A0QXB4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3323210 3323869 . + 0 MSMEG_3240 MSMEG_3240 DNA-binding response regulator, LuxR family protein identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0QXB5,A4ZHS8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3323913 3325754 . + 0 MSMEG_3241 MSMEG_3241 conserved hypothetical protein A0QXB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3325818 3326303 . + 0 MSMEG_3242 MSMEG_3242 starvation-inducible DNA-binding protein or fine tangled pili major subunit identified by match to protein family HMM PF00210 A0QXB7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3327095 3328519 . + 0 MSMEG_3244 MSMEG_3244 hypothetical protein identified by Glimmer2; putative A0QXB8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3328852 3329478 . + 0 MSMEG_3246 MSMEG_3246 response regulator identified by match to protein family HMM PF00072; match to protein family HMM PF03861 A0QXB9 No unknown Rv1626 Rv1626 NC_008596.1 Mycobrowser_v3 CDS 3329756 3330919 . + 0 MSMEG_3247 MSMEG_3247 branched-chain amino acid ABC transporter substrate-binding protein identified by match to protein family HMM PF01094 A0QXC0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3330998 3332035 . + 0 MSMEG_3248 MSMEG_3248 ABC transporter branched chain amino acid transport permease identified by match to protein family HMM PF02653 A0QXC1 No unknown NC_008596.1 Mycobrowser_v3 tRNA 3328690 3328766 . - 0 MSMEG_3245 MSMEG_3245 tRNA-Leu No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 3388088 3388576 . + 0 MSMEG_3308 MSMEG_3308 universal stress protein family protein, putative identified by match to protein family HMM PF00582 A0QXH9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3332032 3333246 . + 0 MSMEG_3249 MSMEG_3249 branched-chain amino acid ABC transporter, permease protein identified by match to protein family HMM PF02653 A0QXC2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3333243 3334097 . + 0 MSMEG_3250 MSMEG_3250 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0QXC3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4089488 4089820 . + 0 MSMEG_4017 MSMEG_4017 BmyD protein A0QZG5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3334081 3334827 . + 0 MSMEG_3251 MSMEG_3251 branched-chain amino acid ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0QXC4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3334948 3335274 . + 0 MSMEG_3252 MSMEG_3252 membrane protein identified by match to protein family HMM PF02694 A0QXC5 No unknown Rv2639c Rv2639c NC_008596.1 Mycobrowser_v3 CDS 3335279 3336166 . - 0 MSMEG_3253 MSMEG_3253 conserved hypothetical protein A0QXC6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3336282 3336767 . - 0 MSMEG_3254 MSMEG_3254 RDD family protein, putative identified by match to protein family HMM PF06271 A0QXC7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3336777 3337652 . - 0 MSMEG_3255 MSMEG_3255 DoxX subfamily protein, putative identified by match to protein family HMM PF07681 A0QXC8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3337685 3337909 . + 0 MSMEG_3256 MSMEG_3256 mucin-associated surface protein A0QXC9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3337958 3339346 . + 0 MSMEG_3257 xylB xylulokinase identified by similarity to SP:P09099; match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312 A0QXD0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3339343 3339477 . + 0 MSMEG_3258 MSMEG_3258 hypothetical protein identified by Glimmer2; putative A0QXD1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3339524 3340744 . + 0 MSMEG_3259 MSMEG_3259 acyl-CoA dehydrogenase identified by match to protein family HMM PF08028 A0QXD2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3340787 3341722 . + 0 MSMEG_3260 MSMEG_3260 LysR-family protein transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QXD3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3341757 3342605 . + 0 MSMEG_3261 MSMEG_3261 conserved hypothetical protein A0QXD4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3342704 3344113 . + 0 MSMEG_3263 MSMEG_3263 xylulose kinase identified by match to protein family HMM PF00370; match to protein family HMM PF02782 A0QXD5 No unknown Rv0729 Rv0729 NC_008596.1 Mycobrowser_v3 CDS 3344098 3344886 . - 0 MSMEG_3262 MSMEG_3262 L-xylulose reductase identified by match to protein family HMM PF00106 A0QXD6 No unknown NC_008596.1 Mycobrowser_v3 CDS 2417125 2417951 . - 0 MSMEG_2336 MSMEG_2336 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3406973 3407374 . - 0 MSMEG_3328 MSMEG_3328 hypothetical protein identified by Glimmer2; putative A0QXJ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3344883 3345905 . - 0 MSMEG_3264 MSMEG_3264 transcriptional regulator identified by match to protein family HMM PF04198 A0QXD7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3346024 3347112 . + 0 MSMEG_3265 MSMEG_3265 arabitol-phosphate dehydrogenase identified by match to protein family HMM PF00107 A0QXD8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3375472 3376029 . + 0 MSMEG_3296 MSMEG_3296 ECF-family protein sigma factor H identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QXG9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3347124 3348557 . + 0 MSMEG_3266 MSMEG_3266 maltose/maltodextrin-binding protein identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409 A0QXD9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3348569 3349522 . + 0 MSMEG_3267 MSMEG_3267 transporter identified by match to protein family HMM PF00528 A0QXE0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3349525 3350397 . + 0 MSMEG_3268 MSMEG_3268 ABC transporter, permease protein identified by match to protein family HMM PF00528 A0QXE1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3350397 3351506 . + 0 MSMEG_3269 MSMEG_3269 putative sugar ABC transporter ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF03459 A0QXE2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3351503 3352636 . + 0 MSMEG_3270 MSMEG_3270 SN-glycerol-3-phosphate ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0QXE3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3352633 3354375 . + 0 MSMEG_3271 MSMEG_3271 dihydroxyacetone kinase identified by match to protein family HMM PF02733; match to protein family HMM PF02734 A0QXE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3354375 3354836 . + 0 MSMEG_3272 MSMEG_3272 ribose 5-phosphate isomerase identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR02133 A0QXE5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3354888 3355973 . + 0 MSMEG_3273 MSMEG_3273 glutamyl aminopeptidase, M42 family protein identified by match to protein family HMM PF01546; match to protein family HMM PF05343 A0QXE6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3356052 3356885 . + 0 MSMEG_3274 MSMEG_3274 MerR-family protein transcriptional regulator identified by match to protein family HMM PF00376 A0QXE7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3357384 3358010 . + 0 MSMEG_3275 MSMEG_3275 RNA polymerase sigma factor, sigma-70 family protein identified by match to protein family HMM TIGR02937 A0QXE8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3358295 3359179 . + 0 MSMEG_3276 MSMEG_3276 integral membrane protein identified by match to protein family HMM PF00892 A0QXE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3359219 3359566 . + 0 MSMEG_3278 MSMEG_3278 conserved hypothetical protein A0QXF0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3359563 3360411 . - 0 MSMEG_3277 MSMEG_3277 polyamine ABC transporter integral membrane protein identified by match to protein family HMM PF00528 A0QXF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3360408 3361229 . - 0 MSMEG_3279 MSMEG_3279 polyamine ABC transporter permease protein identified by match to protein family HMM PF00528 A0QXF2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3361287 3362480 . - 0 MSMEG_3280 MSMEG_3280 polyamine-binding lipoprotein identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409 A0QXF3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3362546 3363814 . - 0 MSMEG_3281 MSMEG_3281 spermidine/putrescine ABC transporter ATP-binding subunit identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM TIGR01187 A0QXF4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3363710 3363892 . + 0 MSMEG_3282 MSMEG_3282 hypothetical protein identified by Glimmer2; putative A0QXF5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3364011 3365477 . - 0 MSMEG_3283 MSMEG_3283 membrane transport protein identified by match to protein family HMM PF07690 A0QXF6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3365617 3366036 . - 0 MSMEG_3284 MSMEG_3284 transcriptional regulator, MarR family protein identified by match to protein family HMM PF01047 A0QXF7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3366127 3367197 . - 0 MSMEG_3285 MSMEG_3285 3-isopropylmalate dehydrogenase identified by match to protein family HMM PF00180 A0QXF8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3367206 3367937 . - 0 MSMEG_3286 MSMEG_3286 methyltransferase A0QXF9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3367954 3368817 . - 0 MSMEG_3287 MSMEG_3287 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0QXG0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3368990 3369637 . + 0 MSMEG_3288 MSMEG_3288 LysM domain protein identified by match to protein family HMM PF01476 A0QXG1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3402308 3403102 . + 0 MSMEG_3322 MSMEG_3322 hypothetical protein identified by Glimmer2; putative A0QXJ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3369713 3370798 . + 0 MSMEG_3289 MSMEG_3289 gp61 protein identified by match to protein family HMM PF00561 A0QXG2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3370884 3373658 . + 0 MSMEG_3290 MSMEG_3290 regulatory protein identified by match to protein family HMM PF00196 A0QXG3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3373908 3374081 . - 0 MSMEG_3291 MSMEG_3291 hypothetical protein identified by Glimmer2; putative A0QXG4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3374137 3374979 . + 0 MSMEG_3292 MSMEG_3292 DNA-binding protein A0QXG5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3375012 3375185 . - 0 MSMEG_3293 MSMEG_3293 hypothetical protein identified by Glimmer2; putative A0QXG6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3375207 3375320 . + 0 MSMEG_3294 MSMEG_3294 hypothetical protein identified by Glimmer2; putative A0QXG7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3375332 3375463 . + 0 MSMEG_3295 MSMEG_3295 hypothetical protein identified by Glimmer2; putative A0QXG8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3376204 3377424 . + 0 MSMEG_3297 MSMEG_3297 transcriptional regulator, CadC identified by match to protein family HMM PF00486; match to protein family HMM PF00561 A0QXH0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3377556 3378146 . + 0 MSMEG_3298 MSMEG_3298 response regulator receiver domain protein identified by match to protein family HMM PF07080 A0QXH1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3379139 3380224 . + 0 MSMEG_3300 MSMEG_3300 oxidoreductase, Gfo/Idh/MocA family protein identified by match to protein family HMM PF01408 A0QXH2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3380231 3381091 . + 0 MSMEG_3301 MSMEG_3301 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QXH3 No unknown Rv0791c Rv0791c NC_008596.1 Mycobrowser_v3 CDS 3381095 3381979 . + 0 MSMEG_3302 MSMEG_3302 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QXH4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3382070 3383518 . + 0 MSMEG_3303 MSMEG_3303 carboxylic ester hydrolase identified by match to protein family HMM PF03403 A0QXH5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3383593 3384945 . + 0 MSMEG_3304 MSMEG_3304 succinate semialdehyde dehydrogenase identified by match to protein family HMM PF00171 A0QXH6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3384988 3385890 . + 0 MSMEG_3305 MSMEG_3305 integral membrane protein DUF6 identified by match to protein family HMM PF00892 A0QXH7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3579014 3580091 . + 0 MSMEG_3516 MSMEG_3516 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01113 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3386138 3387082 . + 0 MSMEG_3306 MSMEG_3306 zinc-binding alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QXH8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3388626 3389927 . + 0 MSMEG_3309 MSMEG_3309 conserved hypothetical protein identified by match to protein family HMM PF00291; match to protein family HMM TIGR01415 A0QXI0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3390024 3390854 . + 0 MSMEG_3310 MSMEG_3310 integral membrane protein identified by match to protein family HMM PF06724 A0QXI1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3390856 3391146 . - 0 MSMEG_3311 MSMEG_3311 acyl carrier protein A0QXI2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3391207 3391764 . + 0 MSMEG_3312 MSMEG_3312 hemerythrin HHE cation binding domain subfamily protein, putative identified by match to protein family HMM PF01814 A0QXI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3407950 3408447 . - 0 MSMEG_3331 MSMEG_3331 hypothetical protein identified by Glimmer2; putative A0QXK1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3391777 3392985 . - 0 MSMEG_3313 MSMEG_3313 xylose repressor, putative identified by match to protein family HMM PF00480 A0QXI4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3393017 3394192 . + 0 MSMEG_3314 MSMEG_3314 transport protein identified by match to protein family HMM PF07690 A0QXI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3394195 3394488 . - 0 MSMEG_3315 MSMEG_3315 hypothetical protein identified by Glimmer2; putative A0QXI6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3394773 3395795 . + 0 MSMEG_3317 dapB dihydrodipicolinate reductase, N-terminus domain protein identified by match to protein family HMM PF01113; match to protein family HMM PF01408; match to protein family HMM PF02629 A0QXI7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3395749 3397227 . - 0 MSMEG_3316 MSMEG_3316 transporter, major facilitator family protein identified by match to protein family HMM PF07690 A0QXI8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3397224 3398450 . - 0 MSMEG_3318 MSMEG_3318 oxidoreductase identified by match to protein family HMM PF01494 A0QXI9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3398604 3399185 . + 0 MSMEG_3319 MSMEG_3319 repressor protein identified by match to protein family HMM PF00440 A0QXJ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3400223 3402250 . + 0 MSMEG_3321 MSMEG_3321 ATP/GTP-binding protein A0QXJ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3404832 3406022 . - 0 MSMEG_3326 MSMEG_3326 carboxylate-amine ligase identified by match to protein family HMM PF04107; match to protein family HMM TIGR02050 A0QXJ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3406544 3406639 . - 0 MSMEG_3327 MSMEG_3327 hypothetical protein identified by Glimmer2; putative A0QXJ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3408671 3409429 . + 0 MSMEG_3332 MSMEG_3332 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440; match to protein family HMM PF02909 A0QXK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3411240 3411365 . - 0 MSMEG_3334 MSMEG_3334 hypothetical protein identified by Glimmer2; putative A0QXK3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3412441 3413250 . + 0 MSMEG_3335 MSMEG_3335 transcriptional regulator, IclR family protein, putative identified by match to protein family HMM PF01614 A0QXK4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3413291 3414058 . - 0 MSMEG_3336 MSMEG_3336 hydrolase identified by match to protein family HMM PF00561 A0QXK5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3414146 3414412 . - 0 MSMEG_3337 MSMEG_3337 hypothetical protein identified by Glimmer2; putative A0QXK6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3414655 3415773 . + 0 MSMEG_3338 MSMEG_3338 oxidoreductase, FAD/FMN-binding identified by match to protein family HMM PF00724 A0QXK7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3416136 3416414 . - 0 MSMEG_3339 MSMEG_3339 hypothetical protein identified by Glimmer2; putative A0QXK8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3416615 3416989 . - 0 MSMEG_3340 MSMEG_3340 hypothetical protein identified by Glimmer2; putative A0QXK9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3417007 3418218 . - 0 MSMEG_3341 MSMEG_3341 Transposase IS116/IS110/IS902 family protein identified by match to protein family HMM PF01548; match to protein family HMM PF02371 A0QVP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3418987 3419235 . + 0 MSMEG_3342 MSMEG_3342 hypothetical protein identified by Glimmer2; putative A0QXL1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3419267 3420439 . + 0 MSMEG_3343 MSMEG_3343 hypothetical protein identified by Glimmer2; putative A0QXL2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3420444 3421532 . - 0 MSMEG_3344 MSMEG_3344 hypothetical protein identified by Glimmer2; putative A0QXL3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3421734 3422429 . - 0 MSMEG_3345 MSMEG_3345 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QXL4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3422532 3423314 . + 0 MSMEG_3346 MSMEG_3346 putative hydroxyacid aldolase identified by match to protein family HMM PF03328 A0QXL5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3423311 3424108 . + 0 MSMEG_3347 MSMEG_3347 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase identified by match to protein family HMM PF00795 A0QXL6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3424110 3425210 . + 0 MSMEG_3348 MSMEG_3348 bacterial extracellular solute-binding protein, family protein 7 identified by match to protein family HMM PF03480 A0QXL7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3425207 3425725 . + 0 MSMEG_3349 MSMEG_3349 trap dicarboxylate transporter, dctq subunit, putative A0QXL8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3425722 3427083 . + 0 MSMEG_3350 MSMEG_3350 TRAP transporter, DctM-like membrane protein identified by match to protein family HMM PF06808 A0QXL9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3427103 3427399 . + 0 MSMEG_3351 MSMEG_3351 hypothetical protein identified by Glimmer2; putative A0QXM0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3427593 3428096 . - 0 MSMEG_3352 MSMEG_3352 hypothetical protein identified by Glimmer2; putative A0QXM1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3428505 3428870 . + 0 MSMEG_3353 MSMEG_3353 hypothetical protein identified by Glimmer2; putative A0QXM2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3429446 3430054 . + 0 MSMEG_3354 MSMEG_3354 TetR family protein transcriptional regulatory protein identified by match to protein family HMM PF00440 A0QXM3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3430051 3430938 . + 0 MSMEG_3355 MSMEG_3355 conserved hypothetical protein identified by similarity to GB:CAE31701.1; match to protein family HMM PF01370; match to protein family HMM PF05368 A0QXM4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3431015 3431353 . + 0 MSMEG_3356 MSMEG_3356 conserved hypothetical protein TIGR00026 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0QXM5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3431438 3432004 . + 0 MSMEG_3357 MSMEG_3357 metal-dependent phosphohydrolase, HD subdomain A0QXM6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3432244 3432795 . + 0 MSMEG_3358 MSMEG_3358 YaeQ protein identified by match to protein family HMM PF07152 A0QXM7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3433116 3433571 . + 0 MSMEG_3359 MSMEG_3359 cis-3-chloroacrylic acid dehalogenase, putative identified by match to protein family HMM PF01361 A0QXM8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3433691 3434278 . - 0 MSMEG_3360 MSMEG_3360 transcriptional regulator, putative identified by match to protein family HMM PF00440 A0QXM9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3434447 3435112 . - 0 MSMEG_3361 MSMEG_3361 conserved hypothetical protein A0QXN0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3435357 3436148 . - 0 MSMEG_3362 MSMEG_3362 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QXN1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3436349 3436951 . + 0 MSMEG_3363 MSMEG_3363 regulatory protein, TetR identified by match to protein family HMM PF00440 A0QXN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3436955 3437581 . + 0 MSMEG_3364 MSMEG_3364 RhtB family protein transporter identified by match to protein family HMM PF01810 A0QXN3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3437657 3438670 . + 0 MSMEG_3365 MSMEG_3365 transcriptional regulator, AraC family protein identified by match to protein family HMM PF00165; match to protein family HMM PF01965 A0QXN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3438709 3439404 . + 0 MSMEG_3366 MSMEG_3366 isonitrile hydratase, putative identified by match to protein family HMM PF01965 A0QXN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3439442 3440194 . + 0 MSMEG_3367 MSMEG_3367 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0QXN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3440359 3441657 . + 0 MSMEG_3369 MSMEG_3369 putative transport protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QXN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3441702 3441911 . + 0 MSMEG_3370 MSMEG_3370 hypothetical protein identified by Glimmer2; putative A0QXN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3442809 3443147 . - 0 MSMEG_3372 MSMEG_3372 transcriptional regulator, ArsR family protein identified by match to protein family HMM PF01022 A0QXP0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3443225 3444496 . + 0 MSMEG_3373 MSMEG_3373 major facilitator superfamily protein MFS_1 identified by match to protein family HMM PF07690 A0QXP1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3444504 3445529 . - 0 MSMEG_3374 MSMEG_3374 conserved hypothetical protein A0QXP2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3445911 3447587 . + 0 MSMEG_3375 MSMEG_3375 alcohol dehydrogenase identified by match to protein family HMM PF00732; match to protein family HMM PF05199 A0QXP3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3447605 3448519 . + 0 MSMEG_3376 MSMEG_3376 beta-lactamase identified by match to protein family HMM PF00753 A0QXP4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3448679 3449362 . - 0 MSMEG_3377 MSMEG_3377 hypothetical protein identified by Glimmer2; putative A0QXP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3450104 3450889 . + 0 MSMEG_3379 MSMEG_3379 2-deoxy-D-gluconate 3-dehydrogenase identified by match to protein family HMM PF00106 A0QXP6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3450886 3452058 . - 0 MSMEG_3378 MSMEG_3378 beta-lactamase identified by match to protein family HMM PF00144 A0QXP7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3452237 3452626 . + 0 MSMEG_3380 MSMEG_3380 pyridoxamine 5'-phosphate oxidase-related, FMN-binding identified by match to protein family HMM PF01243 A0QXP8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3452634 3453251 . - 0 MSMEG_3381 MSMEG_3381 acyl carrier protein phosphodiesterase identified by match to protein family HMM PF02525 A0QXP9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3466032 3466808 . + 0 MSMEG_3395 MSMEG_3395 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QXR3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3466818 3467594 . - 0 MSMEG_3396 MSMEG_3396 transcriptional regulator, IclR family protein identified by match to protein family HMM PF01614 A0QXR4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3467633 3468964 . - 0 MSMEG_3397 MSMEG_3397 acetylornithine deacetylase identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910 A0QXR5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3484684 3485550 . - 0 MSMEG_3412 MSMEG_3412 polysaccharide deacetylase family protein identified by match to protein family HMM PF01522 A0QXS9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3469021 3470343 . - 0 MSMEG_3398 MSMEG_3398 integral membrane transport protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QXR6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3471648 3473846 . + 0 MSMEG_3400 MSMEG_3400 glutamyl-tRNA(Gln) amidotransferase subunit A identified by match to protein family HMM PF00392; match to protein family HMM PF01425; match to protein family HMM PF07729 A0QXR7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3473843 3474640 . + 0 MSMEG_3401 MSMEG_3401 LamB/YcsF family protein identified by match to protein family HMM PF03746 A0QXR8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3474657 3476018 . + 0 MSMEG_3402 MSMEG_3402 cytosine permease, putative identified by match to protein family HMM PF02133 A0QXR9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3476015 3477016 . + 0 MSMEG_3403 MSMEG_3403 formamidase identified by match to protein family HMM PF00795 A0QXS0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3477089 3478327 . + 0 MSMEG_3404 MSMEG_3404 HNH endonuclease domain protein identified by match to protein family HMM PF01844 A0QXS1 No unknown Rv1765c Rv1765c NC_008596.1 Mycobrowser_v3 CDS 3478441 3479892 . - 0 MSMEG_3405 MSMEG_3405 methylenomycin A resistance protein identified by match to protein family HMM PF07690 A0QXS2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3479977 3480570 . + 0 MSMEG_3406 MSMEG_3406 putative transcriptional regulator, TetR family protein A0QXS3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3626184 3626669 . - 0 MSMEG_3564 bfr bacterioferritin identified by match to protein family HMM PF00210; match to protein family HMM TIGR00754 A0QY79 No unknown Rv1876 Rv1876 NC_008596.1 Mycobrowser_v3 CDS 3480577 3481794 . - 0 MSMEG_3407 MSMEG_3407 epoxide hydrolase identified by match to protein family HMM PF00561; match to protein family HMM PF06441 A0QXS4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3481863 3482456 . + 0 MSMEG_3408 MSMEG_3408 conserved hypothetical protein identified by match to protein family HMM PF07336 A0QXS5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3482577 3483530 . - 0 MSMEG_3409 MSMEG_3409 oxidoreductase identified by match to protein family HMM PF00107 A0QXS6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3483534 3484115 . - 0 MSMEG_3410 MSMEG_3410 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QXS7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3484243 3484680 . + 0 MSMEG_3411 MSMEG_3411 MOSC domain protein identified by match to protein family HMM PF03473 A0QXS8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3678199 3678690 . + 0 MSMEG_3614 MSMEG_3614 hypothetical protein identified by Glimmer2; putative A0QYC9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3486061 3487176 . - 0 MSMEG_3414 MSMEG_3414 conserved hypothetical protein A0QXT0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3487270 3487755 . + 0 MSMEG_3415 MSMEG_3415 MarR-family protein regulatory protein identified by match to protein family HMM PF01047; match to protein family HMM PF01978 A0QXT1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3487878 3488744 . + 0 MSMEG_3416 MSMEG_3416 protein of unknown function DUF6, transmembrane, putative identified by match to protein family HMM PF00892 A0QXT2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3488769 3489272 . - 0 MSMEG_3417 MSMEG_3417 conserved hypothetical protein A0QXT3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3489356 3489784 . - 0 MSMEG_3418 MSMEG_3418 conserved hypothetical protein A0QXT4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3489877 3490839 . - 0 MSMEG_3419 MSMEG_3419 hypothetical protein identified by Glimmer2; putative A0QXT5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3491197 3491967 . - 0 MSMEG_3420 MSMEG_3420 gluconate 5-dehydrogenase identified by match to protein family HMM PF00106 A0QXT6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3491964 3493388 . - 0 MSMEG_3421 MSMEG_3421 inner membrane metabolite transport protein YdfJ identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QXT7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3493671 3494702 . + 0 MSMEG_3422 MSMEG_3422 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding identified by match to protein family HMM PF00899; match to protein family HMM PF02826 A0QXT8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3626921 3627553 . + 0 MSMEG_3566 MSMEG_3566 FadD16 protein A0QY81 No unknown Rv0852 Rv0852 NC_008596.1 Mycobrowser_v3 CDS 3494759 3495541 . + 0 MSMEG_3423 MSMEG_3423 probable IclR family protein regulator identified by match to protein family HMM PF01614 A0QXT9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3495569 3496423 . + 0 MSMEG_3424 MSMEG_3424 transcriptional regulator, MerR family protein identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 A0QXU0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3496425 3497039 . - 0 MSMEG_3425 MSMEG_3425 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QXU1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3497064 3497915 . - 0 MSMEG_3426 MSMEG_3426 short chain dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QXU2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3786225 3787038 . + 0 MSMEG_3717 MSMEG_3717 short-chain dehydrogenase/reductase SDR; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3498088 3499005 . + 0 MSMEG_3427 MSMEG_3427 metal dependent hydrolase identified by match to protein family HMM PF00753 A0QXU3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3499056 3499430 . + 0 MSMEG_3428 MSMEG_3428 conserved hypothetical protein A0QXU4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2428660 2429902 . - 0 MSMEG_2348 MSMEG_2348 glycosyl transferase, group 1 family protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00534 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3529999 3530907 . - 0 MSMEG_3463 MSMEG_3463 putative esterase A0QXX9 No unknown Rv3298c Rv3298c NC_008596.1 Mycobrowser_v3 CDS 3499988 3501115 . + 0 MSMEG_3429 MSMEG_3429 O-acyl transferase identified by match to protein family HMM PF01757 A0QXU5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3501227 3501832 . + 0 MSMEG_3430 MSMEG_3430 SAM-dependent methyltransferase A0QXU6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3501834 3502136 . - 0 MSMEG_3431 MSMEG_3431 choline dehydrogenase identified by match to protein family HMM PF05199 A0QXU7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3502304 3503770 . + 0 MSMEG_3433 MSMEG_3433 IS1549, transposase identified by similarity to GP:2935133; match to protein family HMM PF01609 A0QNK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3503726 3505195 . - 0 MSMEG_3432 MSMEG_3432 choline dehydrogenase identified by match to protein family HMM PF00732 A0QXU9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3505505 3506134 . + 0 MSMEG_3434 MSMEG_3434 peptidyl-prolyl cis-trans isomerase, fkbp-type domain protein identified by match to protein family HMM PF00254 A0QXV0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3506198 3506590 . + 0 MSMEG_3435 MSMEG_3435 conserved hypothetical protein A0QXV1 No unknown Rv0367c Rv0367c NC_008596.1 Mycobrowser_v3 CDS 3506616 3507194 . + 0 MSMEG_3436 MSMEG_3436 conserved hypothetical protein A0QXV2 No unknown Rv0366c Rv0366c NC_008596.1 Mycobrowser_v3 CDS 3507206 3508558 . - 0 MSMEG_3437 MSMEG_3437 putative esterase family protein identified by match to protein family HMM PF00756; match to protein family HMM PF01476 A0QXV3 No unknown Rv1288 Rv1288 NC_008596.1 Mycobrowser_v3 CDS 3508887 3509057 . - 0 MSMEG_3438 MSMEG_3438 hypothetical protein identified by Glimmer2; putative A0QXV4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3508893 3509048 . + 0 MSMEG_3439 MSMEG_3439 hypothetical protein identified by Glimmer2; putative A0QXV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3509255 3510631 . + 0 MSMEG_3440 sdaA L-serine ammonia-lyase identified by similarity to SP:P16095; match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720 A0QXV6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3510665 3511171 . - 0 MSMEG_3441 MSMEG_3441 hypothetical protein identified by Glimmer2; putative A0QXV7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3511367 3512173 . + 0 MSMEG_3442 MSMEG_3442 cyclohexadienyl dehydratase identified by match to protein family HMM PF00497 A0QXV8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3512435 3513934 . - 0 MSMEG_3444 MSMEG_3444 choline dehydrogenase identified by match to protein family HMM PF00732; match to protein family HMM PF05199 A0QXW0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3514040 3515053 . + 0 MSMEG_3445 MSMEG_3445 5,10-methylenetetrahydromethanopterin reductase identified by match to protein family HMM PF00296 A0QXW1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3515287 3515433 . + 0 MSMEG_3446 MSMEG_3446 hypothetical protein identified by Glimmer2; putative A0QXW2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3515585 3516229 . + 0 MSMEG_3447 MSMEG_3447 two-component system response regulator identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0QXW3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3516234 3517415 . - 0 MSMEG_3448 MSMEG_3448 two-component system sensor kinase identified by match to protein family HMM PF02518; match to protein family HMM PF07730 A0QXW4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3517620 3518267 . - 0 MSMEG_3449 MSMEG_3449 DNA-binding protein A0QXW5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3518377 3519072 . + 0 MSMEG_3450 dehII haloacid dehalogenase, type II identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493 A0QXW6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3519095 3519946 . - 0 MSMEG_3451 MSMEG_3451 short-chain dehydrogenase/reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QXW7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3520041 3520619 . + 0 MSMEG_3452 MSMEG_3452 TetR family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QXW8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3520758 3521030 . + 0 MSMEG_3454 MSMEG_3454 hypothetical protein identified by Glimmer2; putative A0QXW9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3536879 3537790 . + 0 MSMEG_3470 MSMEG_3470 NAD-dependent epimerase/dehydratase identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993 A0QXY6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3537873 3539153 . + 0 MSMEG_3471 MSMEG_3471 GTP cyclohydrolase A0QXY7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3539153 3540352 . + 0 MSMEG_3472 MSMEG_3472 conserved hypothetical protein identified by match to protein family HMM PF07958 A0QXY8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3540363 3540992 . + 0 MSMEG_3473 upp uracil phosphoribosyltransferase identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091 A0QXY9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3541055 3541705 . + 0 MSMEG_3474 MSMEG_3474 probable conserved integral membrane protein identified by match to protein family HMM PF02517 A0QXZ0 No unknown Rv0658c Rv0658c NC_008596.1 Mycobrowser_v3 CDS 3541709 3542491 . - 0 MSMEG_3475 MSMEG_3475 conserved hypothetical protein A0QXZ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3811821 3812761 . - 0 MSMEG_3747 MSMEG_3747 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3544716 3545447 . + 0 MSMEG_3478 MSMEG_3478 tena/thi-4 family protein identified by match to protein family HMM PF03070 A0QXZ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3546179 3547108 . + 0 MSMEG_3480 MSMEG_3480 streptomycin 6-kinase (Streptidine kinase) (Streptomycin6-phosphotransferase) (APH(6)) identified by match to protein family HMM PF04655 A0QXZ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3547122 3548174 . - 0 MSMEG_3481 MSMEG_3481 O-succinylbenzoate synthase identified by match to protein family HMM PF01188 A0QXZ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3548221 3548475 . + 0 MSMEG_3482 MSMEG_3482 hypothetical protein identified by Glimmer2; putative A0QXZ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3548528 3549193 . + 0 MSMEG_3483 MSMEG_3483 mosc domain protein identified by match to protein family HMM PF03473 A0QXZ9 No unknown Rv1864c Rv1864c NC_008596.1 Mycobrowser_v3 CDS 3549195 3549722 . - 0 MSMEG_3484 MSMEG_3484 cupin domain protein identified by match to protein family HMM PF07883 A0QY00 No unknown NC_008596.1 Mycobrowser_v3 CDS 3549755 3550351 . - 0 MSMEG_3485 MSMEG_3485 putative ECF sigma factor RpoE1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0QY01 No unknown NC_008596.1 Mycobrowser_v3 CDS 3550348 3551805 . - 0 MSMEG_3486 katA catalase KatA identified by similarity to SP:P26901; match to protein family HMM PF00199 A0QY02 No unknown NC_008596.1 Mycobrowser_v3 CDS 3551822 3552478 . - 0 MSMEG_3487 MSMEG_3487 metal-dependent phosphohydrolase identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277 A0QY03 No unknown NC_008596.1 Mycobrowser_v3 CDS 3552713 3553684 . + 0 MSMEG_3488 MSMEG_3488 transcriptional regulator, AraC family protein identified by match to protein family HMM PF00165; match to protein family HMM PF01965 A0QY04 No unknown NC_008596.1 Mycobrowser_v3 CDS 3553689 3554375 . - 0 MSMEG_3489 MSMEG_3489 conserved hypothetical protein, putative identified by match to protein family HMM PF00657 A0QY05 No unknown Rv0518 Rv0518 NC_008596.1 Mycobrowser_v3 CDS 3554508 3555722 . - 0 MSMEG_3490 MSMEG_3490 putative membrane acyltransferase identified by match to protein family HMM PF01757 A0QY06 No unknown Rv0517 Rv0517 NC_008596.1 Mycobrowser_v3 CDS 3556086 3556586 . - 0 MSMEG_3491 MSMEG_3491 conserved hypothetical protein A0QY07 No unknown Rv1906c Rv1906c NC_008596.1 Mycobrowser_v3 CDS 3556736 3557890 . + 0 MSMEG_3492 MSMEG_3492 phosphodiesterase identified by match to protein family HMM PF01663 A0QY08 No unknown NC_008596.1 Mycobrowser_v3 CDS 3557926 3558267 . + 0 MSMEG_3493 MSMEG_3493 putative secreted protein identified by match to protein family HMM PF05305 A0QY09 No unknown Rv0559c Rv0559c NC_008596.1 Mycobrowser_v3 CDS 3558309 3558770 . + 0 MSMEG_3494 MSMEG_3494 putative secreted protein A0QY10 No unknown Rv0455c Rv0455c NC_008596.1 Mycobrowser_v3 CDS 3559120 3559596 . + 0 MSMEG_3495 MSMEG_3495 MmpS5 protein identified by match to protein family HMM PF05423 A0QY11 No unknown Rv0677c Rv0677c NC_008596.1 Mycobrowser_v3 CDS 3574156 3575241 . - 0 MSMEG_3510 MSMEG_3510 ISMsm2, transposase identified by similarity to GB:CAD18826.1 A0QNI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3590198 3590848 . + 0 MSMEG_3529 MSMEG_3529 fatty acid hydroxylase identified by match to protein family HMM PF04116 A0QY43 No unknown NC_008596.1 Mycobrowser_v3 CDS 3559593 3562502 . + 0 MSMEG_3496 MSMEG_3496 MmpL4 protein identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833 A0QY12 No unknown Rv0676c Rv0676c NC_008596.1 Mycobrowser_v3 CDS 3562524 3563264 . - 0 MSMEG_3497 MSMEG_3497 transcriptional regulator, ArsR family protein A0QY13 No unknown NC_008596.1 Mycobrowser_v3 CDS 3563614 3563733 . + 0 MSMEG_3498 MSMEG_3498 hypothetical protein identified by Glimmer2; putative A0QY14 No unknown NC_008596.1 Mycobrowser_v3 CDS 3563799 3564401 . + 0 MSMEG_3499 MSMEG_3499 conserved hypothetical protein A0QY15 No unknown NC_008596.1 Mycobrowser_v3 CDS 3564453 3565199 . + 0 MSMEG_3500 MSMEG_3500 conserved hypothetical protein identified by match to protein family HMM PF03883 A0QY16 No unknown NC_008596.1 Mycobrowser_v3 CDS 3565323 3565700 . - 0 MSMEG_3501 MSMEG_3501 hypothetical protein identified by Glimmer2; putative A0QY17 No unknown NC_008596.1 Mycobrowser_v3 CDS 3581377 3582507 . + 0 MSMEG_3519 MSMEG_3519 oxidoreductase, 2-nitropropane dioxygenase family protein identified by match to protein family HMM PF03060 A0QY34 No unknown Rv1894c Rv1894c NC_008596.1 Mycobrowser_v3 CDS 3582635 3583222 . + 0 MSMEG_3520 MSMEG_3520 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QY35 No unknown Rv0196 Rv0196 NC_008596.1 Mycobrowser_v3 CDS 3583219 3585468 . + 0 MSMEG_3521 MSMEG_3521 molybdopterin oxidoreductase identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879 A0QY36 No unknown Rv0197 Rv0197 NC_008596.1 Mycobrowser_v3 CDS 3585553 3585981 . - 0 MSMEG_3522 MSMEG_3522 dopamine receptor D4 A0QY37 No unknown NC_008596.1 Mycobrowser_v3 CDS 3586215 3587507 . + 0 MSMEG_3524 MSMEG_3524 linalool 8-monooxygenase A0QY38 No unknown NC_008596.1 Mycobrowser_v3 CDS 3587428 3587847 . - 0 MSMEG_3523 MSMEG_3523 probable membrane protein A0QY39 No unknown Rv1892 Rv1892 NC_008596.1 Mycobrowser_v3 CDS 3587930 3588706 . + 0 MSMEG_3525 MSMEG_3525 transcriptional regulator, XRE family protein identified by match to protein family HMM PF01381 A0QY40 No unknown NC_008596.1 Mycobrowser_v3 CDS 3588785 3589417 . + 0 MSMEG_3526 MSMEG_3526 conserved hypothetical protein identified by match to protein family HMM TIGR01926 A0QY41 No unknown NC_008596.1 Mycobrowser_v3 CDS 3589470 3590201 . + 0 MSMEG_3527 MSMEG_3527 putative HTH-type transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QY42 No unknown Rv0586 Rv0586 NC_008596.1 Mycobrowser_v3 CDS 3590832 3591611 . - 0 MSMEG_3528 MSMEG_3528 ErfK/YbiS/YcfS/YnhG family protein identified by match to protein family HMM PF03734 A0QY44 No unknown Rv0116c Rv0116c NC_008596.1 Mycobrowser_v3 CDS 3591737 3592342 . - 0 MSMEG_3530 MSMEG_3530 conserved hypothetical protein A0QY45 No unknown NC_008596.1 Mycobrowser_v3 CDS 3592366 3593796 . - 0 MSMEG_3531 MSMEG_3531 conserved hypothetical protein A0QY46 No unknown Rv1887 Rv1887 NC_008596.1 Mycobrowser_v3 CDS 3593962 3595527 . + 0 MSMEG_3533 MSMEG_3533 Di-/tripeptide transporter identified by match to protein family HMM PF00854; match to protein family HMM TIGR00924 A0QY47 No unknown NC_008596.1 Mycobrowser_v3 CDS 3595524 3596474 . - 0 MSMEG_3532 MSMEG_3532 serine/threonine dehydratase family protein identified by match to protein family HMM PF00291 A0QY48 No unknown NC_008596.1 Mycobrowser_v3 CDS 3597069 3598112 . + 0 MSMEG_3535 speB agmatinase identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230 A0QY50 No unknown NC_008596.1 Mycobrowser_v3 CDS 3598192 3600066 . + 0 MSMEG_3536 MSMEG_3536 sugar transport protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QY51 No unknown NC_008596.1 Mycobrowser_v3 CDS 3600074 3600313 . + 0 MSMEG_3537 MSMEG_3537 hypothetical protein identified by Glimmer2; putative A0QY52 No unknown NC_008596.1 Mycobrowser_v3 CDS 3600326 3601186 . - 0 MSMEG_3538 MSMEG_3538 cyclopropane-fatty-acyl-phospholipid synthase 1 identified by match to protein family HMM PF02353 A0QY53 No unknown NC_008596.1 Mycobrowser_v3 CDS 3601197 3601316 . + 0 MSMEG_3539 MSMEG_3539 hypothetical protein identified by Glimmer2; putative A0QY54 No unknown NC_008596.1 Mycobrowser_v3 CDS 3601386 3601607 . + 0 MSMEG_3540 MSMEG_3540 conserved hypothetical protein A0QY55 No unknown NC_008596.1 Mycobrowser_v3 CDS 3601604 3601975 . + 0 MSMEG_3542 MSMEG_3542 conserved hypothetical protein A0QY56 No unknown NC_008596.1 Mycobrowser_v3 CDS 3601917 3602810 . - 0 MSMEG_3541 MSMEG_3541 cytochrome C biogenesis protein transmembrane region identified by match to protein family HMM PF02683 A0QY57 No unknown Rv2877c Rv2877c NC_008596.1 Mycobrowser_v3 CDS 3814080 3815851 . - 0 MSMEG_3749 MSMEG_3749 DNA repair protein RecN; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3603465 3604370 . - 0 MSMEG_3544 MSMEG_3544 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QY59 No unknown NC_008596.1 Mycobrowser_v3 CDS 3604423 3605046 . - 0 MSMEG_3545 MSMEG_3545 hypothetical protein identified by Glimmer2; putative A0QY60 No unknown NC_008596.1 Mycobrowser_v3 CDS 3605339 3606676 . + 0 MSMEG_3546 MSMEG_3546 conserved hypothetical protein A0QY61 No unknown NC_008596.1 Mycobrowser_v3 CDS 3607110 3607949 . + 0 MSMEG_3547 ehuB ectoine/hydroxyectoine ABC transporter solute-binding protein identified by match to protein family HMM PF00497; match to protein family HMM TIGR01409; match to protein family HMM TIGR02995 A0QY62 No unknown NC_008596.1 Mycobrowser_v3 CDS 3607960 3608673 . + 0 MSMEG_3548 ehuC ectoine/hydroxyectoine ABC transporter, permease protein EhuC identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03004 A0QY63 No unknown NC_008596.1 Mycobrowser_v3 CDS 3608670 3609350 . + 0 MSMEG_3549 ehuD ectoine/hydroxyectoine ABC transporter, permease protein EhuD identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03003 A0QY64 No unknown NC_008596.1 Mycobrowser_v3 CDS 3609381 3610136 . + 0 MSMEG_3550 ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM TIGR03005 A0QY65 No unknown NC_008596.1 Mycobrowser_v3 CDS 3610192 3611469 . + 0 MSMEG_3551 MSMEG_3551 linalool 8-monooxygenase identified by match to protein family HMM PF00067 A0QY66 No unknown Rv2266 Rv2266 NC_008596.1 Mycobrowser_v3 CDS 3611488 3612708 . - 0 MSMEG_3552 MSMEG_3552 conserved hypothetical protein A0QY67 No unknown NC_008596.1 Mycobrowser_v3 CDS 3612964 3614376 . + 0 MSMEG_3553 hydA dihydropyrimidinase identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033 A0QY68 No unknown NC_008596.1 Mycobrowser_v3 CDS 3614417 3615436 . + 0 MSMEG_3554 MSMEG_3554 N5,N10-methylene- tetrahydromethanopterin reductase identified by match to protein family HMM PF00296 A0QY69 No unknown NC_008596.1 Mycobrowser_v3 CDS 3615464 3616312 . + 0 MSMEG_3555 MSMEG_3555 hydrolase identified by match to protein family HMM PF00795 A0QY70 No unknown NC_008596.1 Mycobrowser_v3 CDS 3616326 3617897 . + 0 MSMEG_3556 MSMEG_3556 integral membrane transporter identified by match to protein family HMM PF02133 A0QY71 No unknown NC_008596.1 Mycobrowser_v3 CDS 3617957 3619402 . - 0 MSMEG_3557 MSMEG_3557 amino acid permease-associated region identified by match to protein family HMM PF00324 A0QY72 No unknown NC_008596.1 Mycobrowser_v3 CDS 3619557 3620492 . - 0 MSMEG_3558 MSMEG_3558 carboxymethylenebutenolidase identified by match to protein family HMM PF01738 A0QY73 No unknown NC_008596.1 Mycobrowser_v3 CDS 3620574 3621500 . + 0 MSMEG_3559 MSMEG_3559 short chain dehydrogenase A0QY74 No unknown NC_008596.1 Mycobrowser_v3 CDS 3621505 3621867 . - 0 MSMEG_3560 MSMEG_3560 conserved hypothetical protein A0QY75 No unknown NC_008596.1 Mycobrowser_v3 CDS 3621908 3623269 . - 0 MSMEG_3561 glnA glutamine synthetase, catalytic domain identified by match to protein family HMM PF00120 A0QY76 No unknown Rv1878 Rv1878 NC_008596.1 Mycobrowser_v3 CDS 3623312 3623794 . - 0 MSMEG_3562 pcaC 4-carboxymuconolactone decarboxylase domain protein identified by match to protein family HMM PF02627 A0QY77 No unknown NC_008596.1 Mycobrowser_v3 CDS 3623967 3626027 . - 0 MSMEG_3563 MSMEG_3563 drug transporter identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711 A0QY78 No unknown Rv1877 Rv1877 NC_008596.1 Mycobrowser_v3 CDS 3627765 3628532 . - 0 MSMEG_3567 MSMEG_3567 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QY83 No unknown NC_008596.1 Mycobrowser_v3 CDS 3628592 3629335 . - 0 MSMEG_3569 MSMEG_3569 conserved hypothetical protein A0QY84 No unknown Rv1874 Rv1874 NC_008596.1 Mycobrowser_v3 CDS 3629411 3631426 . + 0 MSMEG_3570 MSMEG_3570 conserved hypothetical protein identified by match to protein family HMM PF05976 A0QY85 No unknown NC_008596.1 Mycobrowser_v3 CDS 3631442 3632071 . - 0 MSMEG_3571 MSMEG_3571 thioesterase family protein identified by match to protein family HMM PF03061 A0QY86 No unknown NC_008596.1 Mycobrowser_v3 CDS 3632220 3632795 . + 0 MSMEG_3572 MSMEG_3572 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QY87 No unknown NC_008596.1 Mycobrowser_v3 CDS 3632831 3633964 . + 0 MSMEG_3573 MSMEG_3573 integral membrane protein, putative A0QY88 No unknown NC_008596.1 Mycobrowser_v3 CDS 3633987 3635588 . + 0 MSMEG_3574 MSMEG_3574 TPR domain protein identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721 A0QY89 No unknown NC_008596.1 Mycobrowser_v3 CDS 3635643 3636122 . + 0 MSMEG_3575 MSMEG_3575 cytidine/deoxycytidylate deaminase, zinc-binding region identified by match to protein family HMM PF00383 A0QY90 No unknown NC_008596.1 Mycobrowser_v3 CDS 3636119 3637426 . + 0 MSMEG_3576 MSMEG_3576 alpha-amylase 3 identified by match to protein family HMM PF00128 A0QY91 No unknown NC_008596.1 Mycobrowser_v3 CDS 3637429 3637878 . - 0 MSMEG_3577 MSMEG_3577 calpastatin A0QY92 No unknown Rv1873 Rv1873 NC_008596.1 Mycobrowser_v3 CDS 3638039 3640156 . + 0 MSMEG_3578 MSMEG_3578 putative cyclase identified by match to protein family HMM PF00211; match to protein family HMM PF00672 A0QY93 No unknown Rv2435c Rv2435c NC_008596.1 Mycobrowser_v3 CDS 3640153 3641547 . + 0 MSMEG_3579 MSMEG_3579 probable conserved transmembrane protein identified by match to protein family HMM PF00027; match to protein family HMM PF00924 A0QY94 No unknown Rv2434c Rv2434c NC_008596.1 Mycobrowser_v3 CDS 3641776 3642765 . + 0 MSMEG_3580 MSMEG_3580 antigen 85-C identified by match to protein family HMM PF00756 A0QY95 No unknown Rv0129c Rv0129c NC_008596.1 Mycobrowser_v3 CDS 3642828 3643589 . - 0 MSMEG_3581 MSMEG_3581 FabG protein identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QY96 No unknown NC_008596.1 Mycobrowser_v3 CDS 3643729 3646068 . + 0 MSMEG_3582 lon ATP-dependent protease La identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07726; match to protein family HMM PF07728; match to protein family HMM TIGR00763 A0QY97 No unknown NC_008596.1 Mycobrowser_v3 CDS 3646220 3647224 . + 0 MSMEG_3583 MSMEG_3583 monooxygenase identified by match to protein family HMM PF00296 A0QY98 No unknown NC_008596.1 Mycobrowser_v3 CDS 3662144 3663193 . - 0 MSMEG_3598 MSMEG_3598 periplasmic sugar-binding proteins identified by match to protein family HMM PF00532 A0QYB3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5444953 5445444 . + 0 MSMEG_5366 MSMEG_5366 conserved hypothetical protein A0R372 No unknown NC_008596.1 Mycobrowser_v3 CDS 3663228 3664277 . - 0 MSMEG_3599 MSMEG_3599 sugar-binding transcriptional regulator, LacI family protein identified by match to protein family HMM PF00532 A0QYB5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3647366 3650245 . - 0 MSMEG_3584 MSMEG_3584 membrane protein, MmpL family protein identified by match to protein family HMM PF03176 A0QY99 No unknown NC_008596.1 Mycobrowser_v3 CDS 3650224 3650718 . - 0 MSMEG_3585 MSMEG_3585 MmpS2 protein identified by match to protein family HMM PF05423 A0QYA0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3650839 3652161 . - 0 MSMEG_3586 MSMEG_3586 major facilitator family protein transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QYA1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3652441 3653880 . + 0 MSMEG_3587 MSMEG_3587 D-serine/D-alanine/glycine transporter identified by match to protein family HMM PF00324 A0QYA2 No unknown Rv1704c Rv1704c NC_008596.1 Mycobrowser_v3 CDS 3653933 3654058 . + 0 MSMEG_3588 MSMEG_3588 hypothetical protein identified by Glimmer2; putative A0QYA3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3654084 3654329 . + 0 MSMEG_3589 MSMEG_3589 conserved hypothetical protein A0QYA4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3654331 3655206 . + 0 MSMEG_3590 MSMEG_3590 conserved hypothetical protein A0QYA5 No unknown Rv2237 Rv2237 NC_008596.1 Mycobrowser_v3 CDS 3670935 3671717 . + 0 MSMEG_3607 MSMEG_3607 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QYC2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3671734 3673200 . - 0 MSMEG_3608 MSMEG_3608 acetyl-CoA acetyltransferase A0QYC3 No unknown Rv1867 Rv1867 NC_008596.1 Mycobrowser_v3 CDS 3672598 3673341 . + 0 MSMEG_3610 MSMEG_3610 conserved hypothetical protein A0QYC4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3673257 3674240 . - 0 MSMEG_3609 MSMEG_3609 hydride transferase 1 identified by match to protein family HMM PF00296 A0QYC5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3674267 3676639 . + 0 MSMEG_3611 xfp D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase identified by match to protein family HMM PF03894 A0QYC6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3676719 3677468 . + 0 MSMEG_3612 MSMEG_3612 probable conserved integral membrane protein identified by match to protein family HMM PF02517 A0QYC7 No unknown Rv1863c Rv1863c NC_008596.1 Mycobrowser_v3 CDS 3678705 3679718 . - 0 MSMEG_3615 MSMEG_3615 zinc-binding alcohol dehydrogenase family protein identified by match to protein family HMM PF00107; match to protein family HMM TIGR02822 A0QYD0 No unknown Rv1862 Rv1862 NC_008596.1 Mycobrowser_v3 CDS 3680844 3681905 . - 0 MSMEG_3618 MSMEG_3618 alanine and proline-rich secreted protein apa identified by match to protein family HMM PF07174 A0QYD3 No unknown Rv1860 Rv1860 NC_008596.1 Mycobrowser_v3 CDS 3682273 3682944 . + 0 MSMEG_3619 MSMEG_3619 short chain dehydrogenase A0QYD4 No unknown Rv1856c Rv1856c NC_008596.1 Mycobrowser_v3 CDS 3682967 3683896 . + 0 MSMEG_3620 MSMEG_3620 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QYD5 No unknown Rv1855c Rv1855c NC_008596.1 Mycobrowser_v3 CDS 3683996 3685369 . + 0 MSMEG_3621 ndh NADH dehydrogenase identified by similarity to GB:AAC46302.1; match to protein family HMM PF00070; match to protein family HMM PF07992 A0QYD6 No unknown Rv1854c Rv1854c NC_008596.1 Mycobrowser_v3 CDS 3685389 3686027 . - 0 MSMEG_3622 MSMEG_3622 conserved hypothetical protein A0QYD7 No unknown Rv1853 Rv1853 NC_008596.1 Mycobrowser_v3 CDS 3686027 3686713 . - 0 MSMEG_3623 ureG urease accessory protein UreG identified by match to protein family HMM PF02492; match to protein family HMM TIGR00101 A0QYD8 No unknown Rv1852 Rv1852 NC_008596.1 Mycobrowser_v3 CDS 3686744 3687379 . - 0 MSMEG_3624 MSMEG_3624 urease accessory protein uref A0QYD9 No unknown Rv1851 Rv1851 NC_008596.1 Mycobrowser_v3 CDS 3687380 3689113 . - 0 MSMEG_3625 ureC urease, alpha subunit identified by match to protein family HMM PF00449; match to protein family HMM PF01979; match to protein family HMM TIGR01792 A0QYE0 No unknown Rv1850 Rv1850 NC_008596.1 Mycobrowser_v3 CDS 3689113 3689442 . - 0 MSMEG_3626 ureB urease, beta subunit identified by match to protein family HMM PF00699; match to protein family HMM TIGR00192 A0QYE1 No unknown Rv1849 Rv1849 NC_008596.1 Mycobrowser_v3 CDS 3689452 3689754 . - 0 MSMEG_3627 ureA urease, gamma subunit identified by match to protein family HMM PF00547; match to protein family HMM TIGR00193 A0QYE2 No unknown Rv1848 Rv1848 NC_008596.1 Mycobrowser_v3 CDS 3689837 3690232 . - 0 MSMEG_3628 MSMEG_3628 ComA operon protein 2 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369 A0QYE3 No unknown Rv1847 Rv1847 NC_008596.1 Mycobrowser_v3 CDS 3690396 3691169 . - 0 MSMEG_3629 MSMEG_3629 conserved hypothetical protein A0QYE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3691404 3691811 . + 0 MSMEG_3630 MSMEG_3630 transcriptional repressor, CopY family protein identified by match to protein family HMM PF03965 A0QYE5 No unknown Rv1846c Rv1846c NC_008596.1 Mycobrowser_v3 CDS 3737032 3737358 . + 0 MSMEG_3672 MSMEG_3672 transporter, small multidrug resistance (SMR) family protein identified by similarity to SP:Q57225; match to protein family HMM PF00893 A0QYI6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3691826 3692782 . + 0 MSMEG_3631 MSMEG_3631 integral membrane protein identified by match to protein family HMM PF01435; match to protein family HMM PF05569 A0QYE6 No unknown Rv1845c Rv1845c NC_008596.1 Mycobrowser_v3 CDS 3692833 3694299 . + 0 MSMEG_3632 gnd 6-phosphogluconate dehydrogenase, decarboxylating identified by similarity to SP:P00350; match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00873 A0QYE7 No unknown Rv1844c Rv1844c NC_008596.1 Mycobrowser_v3 CDS 3694314 3695750 . + 0 MSMEG_3634 MSMEG_3634 IMP dehydrogenase family protein identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01303 A0QYE8 No unknown Rv1843c Rv1843c NC_008596.1 Mycobrowser_v3 CDS 3695733 3696785 . - 0 MSMEG_3633 MSMEG_3633 ferric cations import ATP-binding protein FbpC identified by match to protein family HMM PF00005 A0QYE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3696787 3698292 . - 0 MSMEG_3635 MSMEG_3635 iron(III)-transport system permease protein SfuB identified by match to protein family HMM PF00528 A0QYF0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3698337 3699386 . - 0 MSMEG_3636 MSMEG_3636 ferric iron-binding periplasmic protein of ABC transporter identified by match to protein family HMM PF01547 A0QYF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3985843 3986388 . - 0 MSMEG_3917 MSMEG_3917 hypothetical protein identified by Glimmer2; putative A0QZ68 No unknown NC_008596.1 Mycobrowser_v3 CDS 3699761 3701146 . + 0 MSMEG_3637 MSMEG_3637 CBS domain protein identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471 A0QYF2 No unknown Rv1842c Rv1842c NC_008596.1 Mycobrowser_v3 CDS 3701139 3702233 . + 0 MSMEG_3638 MSMEG_3638 CBS domain protein identified by match to protein family HMM PF00571; match to protein family HMM PF01595 A0QYF3 No unknown Rv1841c Rv1841c NC_008596.1 Mycobrowser_v3 CDS 3702226 3703254 . + 0 MSMEG_3639 MSMEG_3639 conserved hypothetical protein A0QYF4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3703284 3705449 . + 0 MSMEG_3640 glcB malate synthase G identified by match to protein family HMM PF01274; match to protein family HMM TIGR01345 A0QYF5 No unknown Rv1837c Rv1837c NC_008596.1 Mycobrowser_v3 CDS 3705497 3707785 . + 0 MSMEG_3641 MSMEG_3641 conserved hypothetical protein A0QYF6 No unknown Rv1836c Rv1836c NC_008596.1 Mycobrowser_v3 CDS 3707851 3710691 . - 0 MSMEG_3642 gcvP glycine dehydrogenase identified by match to protein family HMM PF01212; match to protein family HMM PF02347; match to protein family HMM TIGR00461 A0QYF7 No unknown Rv1832 Rv1832 NC_008596.1 Mycobrowser_v3 CDS 3710692 3710910 . + 0 MSMEG_3643 MSMEG_3643 hypothetical protein identified by Glimmer2; putative A0QYF8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3711023 3711610 . - 0 MSMEG_3644 MSMEG_3644 transcriptional regulator, MerR family protein A0QYF9 No unknown Rv1830 Rv1830 NC_008596.1 Mycobrowser_v3 CDS 3711891 3712385 . - 0 MSMEG_3645 MSMEG_3645 conserved hypothetical protein identified by match to protein family HMM PF02577 A0QYG0 No unknown Rv1829 Rv1829 NC_008596.1 Mycobrowser_v3 CDS 3712479 3713243 . - 0 MSMEG_3646 MSMEG_3646 transcriptional regulator, MerR family protein identified by match to protein family HMM PF00376 A0QYG1 No unknown Rv1828 Rv1828 NC_008596.1 Mycobrowser_v3 CDS 3713279 3713710 . - 0 MSMEG_3647 MSMEG_3647 forkhead-associated protein identified by match to protein family HMM PF00498 A0QYG2 No unknown Rv1827 Rv1827 NC_008596.1 Mycobrowser_v3 CDS 3713932 3714327 . - 0 MSMEG_3648 gcvH glycine cleavage system H protein identified by similarity to SP:P23884; match to protein family HMM PF01597; match to protein family HMM TIGR00527 A0QYG3 No unknown Rv1826 Rv1826 NC_008596.1 Mycobrowser_v3 CDS 3714350 3715183 . - 0 MSMEG_3649 MSMEG_3649 conserved hypothetical protein identified by match to protein family HMM PF05949 A0QYG4 No unknown Rv1825 Rv1825 NC_008596.1 Mycobrowser_v3 CDS 3715572 3716495 . - 0 MSMEG_3651 MSMEG_3651 membrane associated protein identified by match to protein family HMM PF05949 A0QYG6 No unknown Rv1823 Rv1823 NC_008596.1 Mycobrowser_v3 CDS 3716443 3717138 . + 0 MSMEG_3653 MSMEG_3653 hypothetical protein identified by Glimmer2; putative A0QYG7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3716506 3717096 . - 0 MSMEG_3652 MSMEG_3652 CDP-diacylglycerol-glycerol-3-phosphate identified by match to protein family HMM PF01066 A0QYG8 No unknown Rv1822 Rv1822 NC_008596.1 Mycobrowser_v3 CDS 3717156 3719510 . - 0 MSMEG_3654 MSMEG_3654 ATPase SecA2 identified by match to protein family HMM PF00271; match to protein family HMM PF01043; match to protein family HMM PF07516; match to protein family HMM PF07517 A0QYG9 No unknown Rv1821 Rv1821 NC_008596.1 Mycobrowser_v3 CDS 3719609 3721534 . + 0 MSMEG_3655 MSMEG_3655 ABC transporter, permease/ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF06472 A0QYH0 No unknown Rv1819c Rv1819c NC_008596.1 Mycobrowser_v3 CDS 3848689 3849522 . - 0 MSMEG_3779 MSMEG_3779 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3721548 3723488 . + 0 MSMEG_3656 MSMEG_3656 ABC transporter, permease/ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF06472 A0QYH1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3809299 3809919 . - 0 MSMEG_3745 MSMEG_3745 MutT/nudix family protein identified by match to protein family HMM PF00293 A0QYQ6 No unknown Rv1700 Rv1700 NC_008596.1 Mycobrowser_v3 CDS 3723502 3725001 . - 0 MSMEG_3657 MSMEG_3657 succinate dehydrogenase identified by match to protein family HMM PF00890; match to protein family HMM PF01266 A0QYH2 No unknown Rv1817 Rv1817 NC_008596.1 Mycobrowser_v3 CDS 3724998 3725492 . - 0 MSMEG_3658 MSMEG_3658 conserved hypothetical protein A0QYH3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3725537 3726226 . - 0 MSMEG_3659 MSMEG_3659 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QYH4 No unknown Rv1816 Rv1816 NC_008596.1 Mycobrowser_v3 CDS 3726341 3726784 . + 0 MSMEG_3660 MSMEG_3660 conserved hypothetical protein TIGR00026 A0QYH5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3726804 3727496 . - 0 MSMEG_3661 MSMEG_3661 conserved hypothetical protein A0QYH6 No unknown Rv1815 Rv1815 NC_008596.1 Mycobrowser_v3 CDS 3727672 3728298 . - 0 MSMEG_3662 MSMEG_3662 mannose-binding lectin identified by match to protein family HMM PF01453; match to protein family HMM PF01476 A0QYH7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3728448 3729863 . - 0 MSMEG_3663 MSMEG_3663 oxidoreductase identified by match to protein family HMM PF01266 A0QYH8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3729915 3731060 . - 0 MSMEG_3664 MSMEG_3664 transporter, monovalent cation:proton antiporter-2 (CPA2) family protein identified by match to protein family HMM PF00999 A0QYH9 No unknown Rv3236c Rv3236c NC_008596.1 Mycobrowser_v3 CDS 3731063 3731569 . - 0 MSMEG_3665 MSMEG_3665 TrkA domain protein identified by match to protein family HMM PF02080 A0QYI0 No unknown Rv3237c Rv3237c NC_008596.1 Mycobrowser_v3 CDS 3731597 3732520 . - 0 MSMEG_3666 MSMEG_3666 C-5 sterol desaturase A0QYI1 No unknown Rv1814 Rv1814 NC_008596.1 Mycobrowser_v3 CDS 3732542 3734104 . - 0 MSMEG_3667 MSMEG_3667 para-nitrobenzyl esterase identified by match to protein family HMM PF00135 A0QYI2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3734280 3735554 . + 0 MSMEG_3668 MSMEG_3668 acyl-CoA dehydrogenase identified by match to protein family HMM PF08028 A0QYI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3735585 3736673 . + 0 MSMEG_3669 MSMEG_3669 conserved hypothetical protein A0QYI4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3737317 3738537 . - 0 MSMEG_3671 MSMEG_3671 integral membrane protein identified by match to protein family HMM PF07690 A0QYI7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3861051 3861440 . - 0 MSMEG_3791 rplT ribosomal protein L20 identified by match to protein family HMM PF00453; match to protein family HMM TIGR01032 A0QYU6 No unknown Rv1643 Rv1643 NC_008596.1 Mycobrowser_v3 CDS 3738781 3740985 . + 0 MSMEG_3673 malQ 4-alpha-glucanotransferase identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217 A0QYI8 No unknown Rv1781c Rv1781c NC_008596.1 Mycobrowser_v3 CDS 3741065 3741475 . + 0 MSMEG_3674 MSMEG_3674 hypothetical protein identified by Glimmer2; putative A0QYI9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3741641 3742540 . + 0 MSMEG_3675 MSMEG_3675 metal-dependent hydrolase A0QYJ0 No unknown Rv2777c Rv2777c NC_008596.1 Mycobrowser_v3 CDS 3742546 3743655 . + 0 MSMEG_3676 MSMEG_3676 phenoxybenzoate dioxygenase beta subunit identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0QYJ1 No unknown Rv2776c Rv2776c NC_008596.1 Mycobrowser_v3 CDS 4636715 4637630 . + 0 MSMEG_4546 MSMEG_4546 oxidoreductase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3743679 3745160 . + 0 MSMEG_3677 MSMEG_3677 serine/threonine protein kinase identified by match to protein family HMM PF00069 A0QYJ2 No unknown Rv1746 Rv1746 NC_008596.1 Mycobrowser_v3 CDS 3745516 3745836 . + 0 MSMEG_3678 MSMEG_3678 hypothetical protein identified by Glimmer2; putative A0QYJ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3746175 3746669 . - 0 MSMEG_3679 MSMEG_3679 phosphohydrolase identified by match to protein family HMM PF00293 A0QYJ4 No unknown Rv3733c Rv3733c NC_008596.1 Mycobrowser_v3 CDS 3746956 3747261 . + 0 MSMEG_3680 MSMEG_3680 hypothetical protein identified by Glimmer2; putative A0QYJ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3747389 3748171 . + 0 MSMEG_3682 MSMEG_3682 conserved hypothetical protein identified by match to protein family HMM PF00657 A0QYJ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3748168 3748584 . - 0 MSMEG_3681 MSMEG_3681 conserved hypothetical protein identified by match to protein family HMM PF05305 A0QYJ7 No unknown Rv3354 Rv3354 NC_008596.1 Mycobrowser_v3 CDS 3748660 3749223 . - 0 MSMEG_3683 MSMEG_3683 conserved hypothetical protein A0QYJ8 No unknown Rv1780 Rv1780 NC_008596.1 Mycobrowser_v3 CDS 3749291 3750151 . - 0 MSMEG_3684 MSMEG_3684 nuclear transport factor 2 (NTF2) domain family protein identified by match to protein family HMM PF02136 A0QYJ9 No unknown Rv2042c Rv2042c NC_008596.1 Mycobrowser_v3 CDS 3750230 3750661 . + 0 MSMEG_3685 MSMEG_3685 conserved hypothetical protein A0QYK0 No unknown Rv0313 Rv0313 NC_008596.1 Mycobrowser_v3 CDS 3750763 3751188 . + 0 MSMEG_3686 MSMEG_3686 conserved hypothetical protein A0QYK1 No unknown Rv1891 Rv1891 NC_008596.1 Mycobrowser_v3 CDS 3751261 3752916 . + 0 MSMEG_3687 MSMEG_3687 medium chain acyl-CoA synthetase identified by match to protein family HMM PF00501 A0QYK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3768650 3769939 . + 0 MSMEG_3705 MSMEG_3705 major facilitator superfamily protein MFS_1 identified by match to protein family HMM PF07690 A0QYL8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3753243 3754973 . - 0 MSMEG_3689 MSMEG_3689 sodium:solute symporter identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813 A0QYK4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3755928 3757010 . + 0 MSMEG_3691 galT galactose-1-phosphate uridylyltransferase identified by match to protein family HMM PF01087; match to protein family HMM PF02744; match to protein family HMM TIGR00209 A0QYK5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3757013 3758101 . + 0 MSMEG_3692 galK galactokinase identified by match to protein family HMM PF00288; match to protein family HMM TIGR00131 A0QYK6 No unknown Rv0620 Rv0620 NC_008596.1 Mycobrowser_v3 CDS 3758177 3759400 . - 0 MSMEG_3693 MSMEG_3693 cytochrome P450 monooxygenase identified by match to protein family HMM PF00067 A0QYK7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3759496 3760995 . + 0 MSMEG_3694 MSMEG_3694 feruloyl-CoA synthetase identified by match to protein family HMM PF00501 A0QYK8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3761143 3761553 . + 0 MSMEG_3695 MSMEG_3695 conserved hypothetical protein A0QYK9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3761653 3762354 . + 0 MSMEG_3696 MSMEG_3696 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3762362 3763684 . - 0 MSMEG_3697 MSMEG_3697 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3763403 3763897 . + 0 MSMEG_3698 MSMEG_3698 hypothetical protein identified by Glimmer2; putative A0QYL2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3763858 3763968 . + 0 MSMEG_3699 MSMEG_3699 conserved hypothetical protein A0QYL3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3763971 3765302 . + 0 MSMEG_3700 MSMEG_3700 peroxidase identified by match to protein family HMM TIGR01413 A0QYL4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3765299 3766309 . + 0 MSMEG_3701 MSMEG_3701 conserved hypothetical protein A0QYL5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3766881 3767561 . + 0 MSMEG_3703 MSMEG_3703 hypothetical protein identified by Glimmer2; putative A0QYL6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3767728 3768630 . + 0 MSMEG_3704 MSMEG_3704 3-alpha-hydroxysteroid dehydrogenase identified by match to protein family HMM PF01370 A0QYL7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3790446 3791162 . - 0 MSMEG_3723 pqqC coenzyme PQQ biosynthesis protein C identified by match to protein family HMM PF03070; match to protein family HMM TIGR02111 A0QYN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3770113 3772422 . + 0 MSMEG_3706 aceA isocitrate lyase identified by match to protein family HMM PF00463; match to protein family HMM TIGR01346 A0QYL9 No unknown Rv1915,Rv1916 Rv1915,Rv1916 NC_008596.1 Mycobrowser_v3 CDS 3772431 3773042 . + 0 MSMEG_3707 MSMEG_3707 conserved hypothetical protein A0QYM0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3861730 3862350 . - 0 MSMEG_3793 infC translation initiation factor IF-3 identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168 A0QYU8 No unknown Rv1641 Rv1641 NC_008596.1 Mycobrowser_v3 CDS 3773112 3774191 . + 0 MSMEG_3708 MSMEG_3708 catalase identified by match to protein family HMM PF00199 A0QYM1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3774188 3774766 . + 0 MSMEG_3710 MSMEG_3710 cytochrome b561 family protein identified by match to protein family HMM PF01292 A0QYM2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3774749 3776077 . - 0 MSMEG_3709 MSMEG_3709 conserved hypothetical protein A0QYM3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3776153 3776272 . - 0 MSMEG_3711 MSMEG_3711 hypothetical protein identified by Glimmer2; putative A0QYM4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3776285 3776467 . + 0 MSMEG_3712 MSMEG_3712 hypothetical protein identified by Glimmer2; putative A0QYM5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3776635 3777081 . + 0 MSMEG_3713 MSMEG_3713 hypothetical protein identified by Glimmer2; putative A0QYM6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3777183 3777833 . + 0 MSMEG_3714 MSMEG_3714 conserved hypothetical protein A0QYM7 No unknown Rv1728c Rv1728c NC_008596.1 Mycobrowser_v3 CDS 3786107 3786208 . + 0 MSMEG_3716 MSMEG_3716 hypothetical protein identified by Glimmer2; putative A0QYM9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3787202 3787639 . + 0 MSMEG_3718 MSMEG_3718 conserved hypothetical protein identified by match to protein family HMM PF06803 A0QYN0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3787674 3788843 . - 0 MSMEG_3719 MSMEG_3719 sodium/calcium exchanger protein identified by match to protein family HMM PF01699 A0QYN1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3788855 3789061 . - 0 MSMEG_3720 MSMEG_3720 recombination activating protein 1 A0QYN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3789058 3790188 . - 0 MSMEG_3721 pqqE coenzyme PQQ biosynthesis protein E identified by match to protein family HMM PF04055; match to protein family HMM TIGR02109 A0QYN3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3790181 3790459 . - 0 MSMEG_3722 MSMEG_3722 bifunctional coenzyme PQQ synthesis protein C/D identified by match to protein family HMM PF05402 A0QYN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3791172 3792074 . - 0 MSMEG_3724 pqqB coenzyme PQQ biosynthesis protein B identified by match to protein family HMM TIGR02108 A0QYN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3792156 3792269 . - 0 MSMEG_3725 pqqA coenzyme PQQ biosynthesis protein A identified by match to protein family HMM TIGR02107 A0QYN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3808346 3809302 . - 0 MSMEG_3744 xerD tyrosine recombinase XerD identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225 A0QYQ5 No unknown Rv1701 Rv1701 NC_008596.1 Mycobrowser_v3 CDS 3792319 3794004 . - 0 MSMEG_3726 MSMEG_3726 alcohol dehydrogenase identified by match to protein family HMM PF01011; match to protein family HMM TIGR03075 A0QYN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3794018 3794488 . - 0 MSMEG_3727 MSMEG_3727 hypothetical protein identified by Glimmer2; putative A0QYN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3797154 3798542 . - 0 MSMEG_3730 MSMEG_3730 helix-turn-helix, Fis-type, putative identified by match to protein family HMM PF04397 A0QYP2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3798739 3799824 . - 0 MSMEG_3731 MSMEG_3731 dipeptidase 2 identified by match to protein family HMM PF01244 A0QYP3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3799807 3799917 . + 0 MSMEG_3732 MSMEG_3732 hypothetical protein identified by Glimmer2; putative A0QYP4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3800054 3800311 . - 0 MSMEG_3733 MSMEG_3733 conserved hypothetical protein A0QYP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3800703 3801659 . - 0 MSMEG_3735 MSMEG_3735 YtnM protein identified by match to protein family HMM PF01925 A0QYP6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3801719 3801829 . - 0 MSMEG_3736 MSMEG_3736 hypothetical protein identified by Glimmer2; putative A0QYP7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3801921 3802703 . - 0 MSMEG_3737 MSMEG_3737 integral membrane protein identified by match to protein family HMM PF01925 A0QYP8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3802774 3804189 . - 0 MSMEG_3738 MSMEG_3738 GTP-binding protein EngA identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00650 A0QYP9 No unknown Rv1713 Rv1713 NC_008596.1 Mycobrowser_v3 CDS 3804186 3804872 . - 0 MSMEG_3739 cmk cytidylate kinase identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017 A0QYQ0 No unknown Rv1712 Rv1712 NC_008596.1 Mycobrowser_v3 CDS 3804869 3805612 . - 0 MSMEG_3740 rluB ribosomal large subunit pseudouridine synthase B identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093 A0QYQ1 No unknown Rv1711 Rv1711 NC_008596.1 Mycobrowser_v3 CDS 3805614 3806444 . - 0 MSMEG_3741 MSMEG_3741 transcriptional regulator identified by match to protein family HMM PF04079; match to protein family HMM TIGR00281 A0QYQ2 No unknown Rv1710 Rv1710 NC_008596.1 Mycobrowser_v3 CDS 3806453 3807355 . - 0 MSMEG_3742 scpA segregation and condensation protein A identified by match to protein family HMM PF02616 A0QYQ3 No unknown Rv1709 Rv1709 NC_008596.1 Mycobrowser_v3 CDS 3807352 3808185 . - 0 MSMEG_3743 soj SpoOJ regulator protein identified by match to protein family HMM PF01656 A0QYQ4 No unknown Rv1708 Rv1708 NC_008596.1 Mycobrowser_v3 CDS 3861482 3861676 . - 0 MSMEG_3792 rpmI ribosomal protein L35 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001 A0QYU7 No unknown Rv1642 Rv1642 NC_008596.1 Mycobrowser_v3 CDS 3809912 3811684 . - 0 MSMEG_3746 pyrG CTP synthase identified by match to protein family HMM PF00117; match to protein family HMM PF06418; match to protein family HMM TIGR00337 A0QYQ7 No unknown Rv1699 Rv1699 NC_008596.1 Mycobrowser_v3 CDS 3862415 3862528 . - 0 MSMEG_3794 MSMEG_3794 hypothetical protein identified by Glimmer2; putative A0QYU9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3812765 3813961 . - 0 MSMEG_3748 MSMEG_3748 thiamin pyrophosphokinase, catalytic domain protein A0QYQ8 No unknown Rv1697 Rv1697 NC_008596.1 Mycobrowser_v3 CDS 3815858 3816781 . - 0 MSMEG_3750 MSMEG_3750 inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NADkinase) identified by match to protein family HMM PF01513 A0QYQ9 No unknown Rv1695 Rv1695 NC_008596.1 Mycobrowser_v3 CDS 3816778 3817587 . - 0 MSMEG_3751 MSMEG_3751 hemolysin A identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478 A0QYR0 No unknown Rv1694 Rv1694 NC_008596.1 Mycobrowser_v3 CDS 3817594 3817800 . - 0 MSMEG_3752 MSMEG_3752 conserved hypothetical protein A0QYR1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3817814 3818842 . - 0 MSMEG_3753 MSMEG_3753 hydrolase identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460 A0QYR2 No unknown Rv1692 Rv1692 NC_008596.1 Mycobrowser_v3 CDS 3818844 3819833 . - 0 MSMEG_3754 MSMEG_3754 TPR-repeat-containing protein A0QYR3 No unknown Rv1691 Rv1691 NC_008596.1 Mycobrowser_v3 CDS 3825494 3826816 . - 0 MSMEG_3758 tyrS tyrosyl-tRNA synthetase identified by match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234 A0QYR4 No unknown Rv1689 Rv1689 NC_008596.1 Mycobrowser_v3 CDS 3826823 3827446 . - 0 MSMEG_3759 MSMEG_3759 3-methyladenine DNA glycosylase identified by match to protein family HMM PF02245; match to protein family HMM TIGR00567 A0QYR5 No unknown Rv1688 Rv1688 NC_008596.1 Mycobrowser_v3 rRNA 3819868 3819985 . - 0 MSMEG_3755 rrfA 5S ribosomal RNA No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 3827521 3827730 . + 0 MSMEG_3760 MSMEG_3760 conserved hypothetical protein A0QYR6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3827733 3828299 . + 0 MSMEG_3761 MSMEG_3761 putative Clp protease subunit identified by match to protein family HMM PF02861 A0QYR7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3828376 3829140 . + 0 MSMEG_3762 MSMEG_3762 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0QYR8 No unknown Rv1687c Rv1687c NC_008596.1 Mycobrowser_v3 CDS 3829137 3829907 . + 0 MSMEG_3763 MSMEG_3763 ABC transporter efflux protein, DrrB family protein identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025 A0QYR9 No unknown Rv1686c Rv1686c NC_008596.1 Mycobrowser_v3 CDS 3829921 3830556 . + 0 MSMEG_3765 MSMEG_3765 transcriptional regulator identified by match to protein family HMM PF00440 A0QYS0 No unknown Rv1685c Rv1685c NC_008596.1 Mycobrowser_v3 CDS 3830530 3830739 . - 0 MSMEG_3764 MSMEG_3764 conserved hypothetical protein identified by match to protein family HMM PF03966 A0QYS1 No unknown Rv1684 Rv1684 NC_008596.1 Mycobrowser_v3 CDS 3830749 3831285 . - 0 MSMEG_3766 MSMEG_3766 hypothetical protein identified by Glimmer2; putative A0QYS2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3862580 3862939 . + 0 MSMEG_3795 MSMEG_3795 conserved hypothetical protein A0QYV0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4654528 4654775 . + 0 MSMEG_4562 MSMEG_4562 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3831361 3834354 . - 0 MSMEG_3767 MSMEG_3767 acyl-CoA synthase identified by match to protein family HMM PF00501 A0QYS3 No unknown Rv1683 Rv1683 NC_008596.1 Mycobrowser_v3 CDS 3834599 3836371 . + 0 MSMEG_3768 MSMEG_3768 macrolide-transport ATP-binding protein abc transporter identified by match to protein family HMM PF00005 A0QYS4 No unknown Rv1668c Rv1668c NC_008596.1 Mycobrowser_v3 CDS 3836484 3837893 . - 0 MSMEG_3769 argH argininosuccinate lyase identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838 A0QYS5 No unknown Rv1659 Rv1659 NC_008596.1 Mycobrowser_v3 CDS 3837986 3839185 . - 0 MSMEG_3770 argG argininosuccinate synthase identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032 A0QYS6 No unknown Rv1658 Rv1658 NC_008596.1 Mycobrowser_v3 CDS 3839211 3839687 . - 0 MSMEG_3771 argR arginine repressor identified by match to protein family HMM PF01316; match to protein family HMM PF02863; match to protein family HMM TIGR01529 A0QYS7 No unknown Rv1657 Rv1657 NC_008596.1 Mycobrowser_v3 CDS 3839692 3840615 . - 0 MSMEG_3772 argF ornithine carbamoyltransferase identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658 A0QYS8 No unknown Rv1656 Rv1656 NC_008596.1 Mycobrowser_v3 CDS 3840612 3841784 . - 0 MSMEG_3773 argD acetylornithine aminotransferase identified by match to protein family HMM PF00202; match to protein family HMM PF01212; match to protein family HMM TIGR00707 A0QYS9 No unknown Rv1655 Rv1655 NC_008596.1 Mycobrowser_v3 CDS 3841781 3842662 . - 0 MSMEG_3774 argB acetylglutamate kinase identified by match to protein family HMM PF00696; match to protein family HMM TIGR00761 A0QYT0 No unknown Rv1654 Rv1654 NC_008596.1 Mycobrowser_v3 CDS 3842659 3843855 . - 0 MSMEG_3775 argJ arginine biosynthesis bifunctional protein ArgJ identified by match to protein family HMM PF01960; match to protein family HMM TIGR00120 A0QYT1 No unknown Rv1653 Rv1653 NC_008596.1 Mycobrowser_v3 CDS 3843864 3844895 . - 0 MSMEG_3776 argC N-acetyl-gamma-glutamyl-phosphate reductase identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01850 A0QYT2 No unknown Rv1652 Rv1652 NC_008596.1 Mycobrowser_v3 CDS 3858872 3860263 . + 0 MSMEG_3789 MSMEG_3789 inner membrane permease YgbN identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791 A0QYU4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3845187 3847685 . - 0 MSMEG_3777 pheT phenylalanyl-tRNA synthetase, beta subunit identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472 A0QYT3 No unknown Rv1650 Rv1650 NC_008596.1 Mycobrowser_v3 CDS 3847685 3848755 . - 0 MSMEG_3778 pheS phenylalanyl-tRNA synthetase, alpha subunit identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468 A0QYT4 No unknown Rv1649 Rv1649 NC_008596.1 Mycobrowser_v3 CDS 3849549 3850331 . - 0 MSMEG_3780 MSMEG_3780 adenylate and Guanylate cyclase catalytic domain protein identified by match to protein family HMM PF00211 A0QYT5 No unknown Rv1647 Rv1647 NC_008596.1 Mycobrowser_v3 CDS 3850705 3851742 . + 0 MSMEG_3781 MSMEG_3781 conserved hypothetical protein A0QYT6 No unknown Rv1645c Rv1645c NC_008596.1 Mycobrowser_v3 CDS 3851791 3853026 . + 0 MSMEG_3783 MSMEG_3783 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QYT7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3853023 3853430 . - 0 MSMEG_3782 MSMEG_3782 endoribonuclease L-PSP, putative identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004 A0QYT8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3853450 3854205 . - 0 MSMEG_3784 MSMEG_3784 transcriptional regulator, IclR family protein identified by match to protein family HMM PF01614 A0QYT9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3854210 3855205 . - 0 MSMEG_3785 MSMEG_3785 PfkB-family protein carbohydrate kinase identified by match to protein family HMM PF00294 A0QYU0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3855341 3856615 . + 0 MSMEG_3786 MSMEG_3786 D-amino acid deaminase A0QYU1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3856615 3858216 . + 0 MSMEG_3787 MSMEG_3787 D-aminoacylase identified by match to protein family HMM PF07908; match to protein family HMM PF07969 A0QYU2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3858213 3858842 . + 0 MSMEG_3788 eda 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182 A0QYU3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3873637 3874113 . - 0 MSMEG_3803 MSMEG_3803 lipoprotein LpqH A0QYV8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3860269 3861027 . - 0 MSMEG_3790 MSMEG_3790 RNA methyltransferase, TrmH family protein identified by match to protein family HMM PF00588; match to protein family HMM PF08032 A0QYU5 No unknown Rv1644 Rv1644 NC_008596.1 Mycobrowser_v3 CDS 3863058 3866327 . + 0 MSMEG_3796 MSMEG_3796 lysyl-tRNA synthetase identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM PF04329; match to protein family HMM PF04330; match to protein family HMM PF04331; match to protein family HMM TIGR00499 A0QYV1 No unknown Rv1640c Rv1640c NC_008596.1 Mycobrowser_v3 CDS 3866375 3867739 . + 0 MSMEG_3797 MSMEG_3797 putative esterase family protein identified by match to protein family HMM PF00756 A0QYV2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3867751 3868779 . - 0 MSMEG_3798 MSMEG_3798 conserved hypothetical protein A0QYV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3868776 3870062 . - 0 MSMEG_3799 MSMEG_3799 conserved hypothetical protein A0QYV4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3870193 3870660 . + 0 MSMEG_3800 MSMEG_3800 conserved hypothetical protein A0QYV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3870666 3871853 . - 0 MSMEG_3801 MSMEG_3801 conserved hypothetical protein A0QYV6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3871850 3873571 . - 0 MSMEG_3802 MSMEG_3802 tetratricopeptide repeat family protein identified by match to protein family HMM PF07721 A0QYV7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3874504 3875688 . + 0 MSMEG_3806 MSMEG_3806 conserved hypothetical protein A0QYW0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3875678 3876454 . - 0 MSMEG_3805 MSMEG_3805 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QYW1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3876491 3877093 . + 0 MSMEG_3807 MSMEG_3807 TetR-type regulator identified by match to protein family HMM PF00440 A0QYW2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3877122 3877925 . + 0 MSMEG_3809 MSMEG_3809 conserved hypothetical protein A0QYW3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2557125 2558533 . + 0 MSMEG_2473 MSMEG_2473 sugar transporter; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3893053 3894336 . + 0 MSMEG_3824 MSMEG_3824 conserved hypothetical protein identified by match to protein family HMM PF06545 A0QYX8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3877922 3880816 . - 0 MSMEG_3808 uvrA excinuclease ABC, A subunit identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630 A0QYW4 No unknown Rv1638 Rv1638 NC_008596.1 Mycobrowser_v3 CDS 3880937 3881641 . + 0 MSMEG_3810 MSMEG_3810 hydrolase identified by match to protein family HMM PF00753 A0QYW5 No unknown Rv1637c Rv1637c NC_008596.1 Mycobrowser_v3 CDS 3881645 3882088 . - 0 MSMEG_3811 MSMEG_3811 universal stress protein family protein, putative identified by match to protein family HMM PF00582 A0QYW6 No unknown Rv1636 Rv1636 NC_008596.1 Mycobrowser_v3 CDS 3882386 3883237 . - 0 MSMEG_3812 MSMEG_3812 acyl-CoA thioesterase identified by match to protein family HMM PF02551 A0QYW7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3883219 3883497 . - 0 MSMEG_3813 MSMEG_3813 NAD-dependent epimerase/dehydratase A0QYW8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3883930 3885315 . - 0 MSMEG_3815 MSMEG_3815 possible drug efflux membrane protein identified by match to protein family HMM PF07690 A0QYW9 No unknown Rv1634 Rv1634 NC_008596.1 Mycobrowser_v3 CDS 3885360 3887570 . - 0 MSMEG_3816 uvrB excinuclease ABC, B subunit identified by match to protein family HMM PF00271; match to protein family HMM PF02151; match to protein family HMM TIGR00631 A0QYX0 No unknown Rv1633 Rv1633 NC_008596.1 Mycobrowser_v3 CDS 3887653 3888093 . + 0 MSMEG_3817 MSMEG_3817 conserved hypothetical protein identified by match to protein family HMM PF04167 A0QYX1 No unknown Rv1632c Rv1632c NC_008596.1 Mycobrowser_v3 CDS 3888141 3888686 . + 0 MSMEG_3819 MSMEG_3819 conserved hypothetical protein A0QYX2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3888683 3889576 . - 0 MSMEG_3818 MSMEG_3818 thermolabile glutaminase identified by match to protein family HMM PF04960 A0QYX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2227457 2228022 . - 0 MSMEG_2152 MSMEG_2152 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3889800 3891341 . + 0 MSMEG_3821 MSMEG_3821 amino acid permease identified by match to protein family HMM PF00324 A0QYX5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3891418 3892152 . - 0 MSMEG_3822 MSMEG_3822 regulatory protein GntR, HTH identified by match to protein family HMM PF00392; match to protein family HMM PF02082; match to protein family HMM PF07729 A0QYX6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3892337 3893056 . + 0 MSMEG_3823 MSMEG_3823 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QYX7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3894333 3895127 . + 0 MSMEG_3825 MSMEG_3825 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106 A0QYX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3895124 3896194 . + 0 MSMEG_3826 MSMEG_3826 hypothetical protein identified by Glimmer2; putative A0QYY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3896187 3897479 . + 0 MSMEG_3827 MSMEG_3827 glutamine synthetase identified by match to protein family HMM PF00120 A0QYY1 No unknown NC_008596.1 Mycobrowser_v3 CDS 3897476 3898855 . + 0 MSMEG_3828 MSMEG_3828 glutamine synthetase identified by match to protein family HMM PF00120 A0QYY2 No unknown NC_008596.1 Mycobrowser_v3 CDS 3898899 3899843 . + 0 MSMEG_3829 MSMEG_3829 esterase identified by match to protein family HMM PF07859 A0QYY3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3899840 3900568 . + 0 MSMEG_3830 MSMEG_3830 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QYY4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3900662 3902119 . + 0 MSMEG_3832 MSMEG_3832 4-hydroxyacetophenone monooxygenase A0QYY5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3903380 3904819 . - 0 MSMEG_3833 MSMEG_3833 30S ribosomal protein S1 identified by match to protein family HMM PF00575 A0QYY6 No unknown Rv1630 Rv1630 NC_008596.1 Mycobrowser_v3 CDS 3905025 3905606 . - 0 MSMEG_3834 MSMEG_3834 putative TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QYY7 No unknown NC_008596.1 Mycobrowser_v3 CDS 3905603 3905764 . - 0 MSMEG_3835 MSMEG_3835 YesF protein A0QYY8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3906374 3907534 . + 0 MSMEG_3838 MSMEG_3838 integral membrane protein A0QYZ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3907516 3908757 . - 0 MSMEG_3837 MSMEG_3837 conserved hypothetical protein A0QYZ1,A4ZHS9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3923853 3924875 . - 0 MSMEG_3852 MSMEG_3852 aliphatic sulfonate binding protein identified by match to protein family HMM TIGR01728 A0QZ05 No unknown NC_008596.1 Mycobrowser_v3 CDS 3924920 3925657 . - 0 MSMEG_3853 MSMEG_3853 putative aliphatic sulfonates transport ATP-binding protein SsuB identified by match to protein family HMM PF00005 A0QZ06 No unknown NC_008596.1 Mycobrowser_v3 CDS 3908769 3911495 . - 0 MSMEG_3839 MSMEG_3839 DNA polymerase I identified by match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 A0QYZ2 No unknown Rv1629 Rv1629 NC_008596.1 Mycobrowser_v3 CDS 3911506 3912411 . - 0 MSMEG_3840 MSMEG_3840 LysR-family protein transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QYZ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 3912482 3913630 . + 0 MSMEG_3841 MSMEG_3841 monooxygenase, FAD-binding identified by match to protein family HMM PF01266; match to protein family HMM PF01494 A0QYZ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 3913627 3914298 . + 0 MSMEG_3842 MSMEG_3842 putative esterase A0QYZ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3914357 3914806 . + 0 MSMEG_3843 MSMEG_3843 conserved hypothetical protein identified by match to protein family HMM PF01796 A0QYZ6 No unknown Rv1628c Rv1628c NC_008596.1 Mycobrowser_v3 CDS 3914803 3916005 . + 0 MSMEG_3844 MSMEG_3844 lipid-transfer protein A0QYZ7 No unknown Rv1627c Rv1627c NC_008596.1 Mycobrowser_v3 CDS 3916139 3916366 . + 0 MSMEG_3845 MSMEG_3845 conserved domain protein identified by match to protein family HMM PF02594 A0QYZ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 3916414 3918405 . - 0 MSMEG_3846 MSMEG_3846 phosphotransferase enzyme family protein identified by match to protein family HMM PF01636 A0QYZ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 3918460 3920418 . - 0 MSMEG_3847 MSMEG_3847 copper methylamine oxidase identified by match to protein family HMM PF01179; match to protein family HMM PF02727; match to protein family HMM PF02728 A0QZ00 No unknown NC_008596.1 Mycobrowser_v3 CDS 3920451 3921959 . - 0 MSMEG_3848 MSMEG_3848 para-nitrobenzyl esterase identified by match to protein family HMM PF00135 A0QZ01 No unknown Rv2045c Rv2045c NC_008596.1 Mycobrowser_v3 CDS 3921789 3922064 . + 0 MSMEG_3849 MSMEG_3849 hypothetical protein identified by Glimmer2; putative A0QZ02 No unknown NC_008596.1 Mycobrowser_v3 CDS 3922735 3923841 . - 0 MSMEG_3850 MSMEG_3850 alkanesulfonate monooxygenase family protein identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296 A0QZ04 No unknown NC_008596.1 Mycobrowser_v3 CDS 2599455 2601142 . - 0 MSMEG_2514 MSMEG_2514 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 3925654 3926445 . - 0 MSMEG_3854 MSMEG_3854 putative aliphatic sulfonates transport permease protein SsuC identified by match to protein family HMM PF00528 A0QZ07 No unknown NC_008596.1 Mycobrowser_v3 CDS 3926606 3927340 . - 0 MSMEG_3855 MSMEG_3855 hypothetical protein identified by Glimmer2; putative A0QZ08 No unknown NC_008596.1 Mycobrowser_v3 CDS 3927427 3928698 . - 0 MSMEG_3856 MSMEG_3856 transcriptional regulator, CadC identified by match to protein family HMM PF00486; match to protein family HMM PF00561 A0QZ09 No unknown NC_008596.1 Mycobrowser_v3 CDS 3928773 3929126 . - 0 MSMEG_3857 MSMEG_3857 conserved hypothetical protein A0QZ10 No unknown Rv2049c Rv2049c NC_008596.1 Mycobrowser_v3 CDS 3929241 3929594 . + 0 MSMEG_3858 MSMEG_3858 conserved hypothetical protein A0QZ11 No unknown Rv2050 Rv2050 NC_008596.1 Mycobrowser_v3 CDS 3929678 3930475 . - 0 MSMEG_3859 MSMEG_3859 glycosyl transferase, group 2 family protein identified by match to protein family HMM PF00535 A0QZ12 No unknown NC_008596.1 Mycobrowser_v3 CDS 3930485 3932332 . - 0 MSMEG_3860 MSMEG_3860 polyprenol-monophosphomannose synthase Ppm1 identified by match to protein family HMM PF00795; match to protein family HMM TIGR00546 A0QZ13 No unknown NC_008596.1 Mycobrowser_v3 CDS 3932325 3933917 . - 0 MSMEG_3861 MSMEG_3861 amidohydrolase 3 identified by match to protein family HMM PF07969 A0QZ14 No unknown Rv2052c Rv2052c NC_008596.1 Mycobrowser_v3 CDS 3933944 3934450 . - 0 MSMEG_3862 MSMEG_3862 FxsA cytoplasmic membrane protein identified by match to protein family HMM PF04186 A0QZ15 No unknown Rv2053c Rv2053c NC_008596.1 Mycobrowser_v3 CDS 3934505 3934897 . - 0 MSMEG_3863 MSMEG_3863 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0QZ16 No unknown Rv2061c Rv2061c NC_008596.1 Mycobrowser_v3 CDS 3949795 3950550 . - 0 MSMEG_3877 cobM precorrin-4 C11-methyltransferase identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465 A0QZ30 No unknown Rv2071c Rv2071c NC_008596.1 Mycobrowser_v3 CDS 3980700 3981236 . - 0 MSMEG_3909 MSMEG_3909 conserved hypothetical protein identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0QZ62 No unknown NC_008596.1 Mycobrowser_v3 CDS 3934939 3938574 . - 0 MSMEG_3864 cobN cobaltochelatase, CobN subunit identified by match to protein family HMM PF02514; match to protein family HMM TIGR02257 A0QZ17 No unknown Rv2062c Rv2062c NC_008596.1 Mycobrowser_v3 CDS 3938659 3938871 . + 0 MSMEG_3865 MSMEG_3865 hypothetical protein identified by Glimmer2; putative A0QZ18 No unknown NC_008596.1 Mycobrowser_v3 CDS 3939351 3941570 . - 0 MSMEG_3867 MSMEG_3867 ATPase family protein associated with various cellular activities (AAA) identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728 A0QZ20 No unknown NC_008596.1 Mycobrowser_v3 CDS 3941567 3942052 . - 0 MSMEG_3868 MSMEG_3868 conserved hypothetical protein A0QZ21 No unknown Rv3165c Rv3165c NC_008596.1 Mycobrowser_v3 CDS 3942049 3942978 . - 0 MSMEG_3869 MSMEG_3869 conserved hypothetical protein A0QZ22 No unknown Rv3166c Rv3166c NC_008596.1 Mycobrowser_v3 CDS 3943094 3943993 . + 0 MSMEG_3870 MSMEG_3870 alpha-ketoglutarate-dependent taurine dioxygenase identified by match to protein family HMM PF02668 A0QZ23 No unknown Rv3406 Rv3406 NC_008596.1 Mycobrowser_v3 CDS 3944015 3945133 . + 0 MSMEG_3871 cobG precorrin-3B synthase identified by match to protein family HMM PF03460; match to protein family HMM TIGR02435 A0QZ24 No unknown Rv2064 Rv2064 NC_008596.1 Mycobrowser_v3 CDS 3945143 3945769 . + 0 MSMEG_3872 MSMEG_3872 precorrin-8X methylmutase identified by match to protein family HMM PF02570 A0QZ25 No unknown Rv2065 Rv2065 NC_008596.1 Mycobrowser_v3 CDS 3945766 3947277 . + 0 MSMEG_3873 MSMEG_3873 cobalamin biosynthesis protein cobIJ identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467 A0QZ26 No unknown Rv2066 Rv2066 NC_008596.1 Mycobrowser_v3 CDS 3947354 3947998 . + 0 MSMEG_3874 MSMEG_3874 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QZ27 No unknown NC_008596.1 Mycobrowser_v3 CDS 3947995 3949062 . + 0 MSMEG_3876 MSMEG_3876 phosphotransferase enzyme family protein, putative identified by match to protein family HMM PF01636 A0QZ28 No unknown NC_008596.1 Mycobrowser_v3 CDS 3949043 3949798 . - 0 MSMEG_3875 cobK precorrin-6x reductase identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715 A0QZ29 No unknown Rv2070c Rv2070c NC_008596.1 Mycobrowser_v3 CDS 3950547 3951731 . - 0 MSMEG_3878 cobL precorrin-6Y C5,15-methyltransferase (decarboxylating) identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; match to protein family HMM TIGR02469 A0QZ31 No unknown Rv2072c Rv2072c NC_008596.1 Mycobrowser_v3 CDS 3951760 3952518 . - 0 MSMEG_3879 MSMEG_3879 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QZ32 No unknown Rv2073c Rv2073c NC_008596.1 Mycobrowser_v3 CDS 3952554 3952973 . + 0 MSMEG_3880 MSMEG_3880 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase identified by match to protein family HMM PF01243 A0QZ33 No unknown Rv2074 Rv2074 NC_008596.1 Mycobrowser_v3 CDS 3952974 3954101 . - 0 MSMEG_3881 MSMEG_3881 proline dipeptidase identified by match to protein family HMM PF00557 A0QZ34 No unknown Rv2089c Rv2089c NC_008596.1 Mycobrowser_v3 CDS 3954112 3954516 . - 0 MSMEG_3882 MSMEG_3882 glyoxalase family protein identified by match to protein family HMM PF00903 A0QZ35 No unknown NC_008596.1 Mycobrowser_v3 CDS 3954552 3955568 . + 0 MSMEG_3883 MSMEG_3883 5'-3' exonuclease identified by match to protein family HMM PF01367; match to protein family HMM PF02739 A0QZ36 No unknown Rv2090 Rv2090 NC_008596.1 Mycobrowser_v3 CDS 3955575 3956438 . - 0 MSMEG_3884 MSMEG_3884 conserved hypothetical protein A0QZ37 No unknown Rv2091c Rv2091c NC_008596.1 Mycobrowser_v3 CDS 3956438 3959176 . - 0 MSMEG_3885 MSMEG_3885 DEAD/DEAH box helicase identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM PF08148 A0QZ38 No unknown Rv2092c Rv2092c NC_008596.1 Mycobrowser_v3 CDS 3959166 3960119 . - 0 MSMEG_3886 tatC twin arginine-targeting protein translocase TatC identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945 A0QZ39 No unknown Rv2093c Rv2093c NC_008596.1 Mycobrowser_v3 CDS 3960196 3960441 . - 0 MSMEG_3887 tatA twin arginine-targeting protein translocase, TatA/E family protein identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411 A0QZ40 No unknown Rv2094c Rv2094c NC_008596.1 Mycobrowser_v3 CDS 3960513 3961469 . - 0 MSMEG_3888 MSMEG_3888 conserved hypothetical protein A0QZ41 No unknown Rv2095c Rv2095c NC_008596.1 Mycobrowser_v3 CDS 3962479 3963837 . - 0 MSMEG_3890 MSMEG_3890 proteasome component identified by match to protein family HMM PF03136; match to protein family HMM PF03316 A0QZ42 No unknown Rv2097c Rv2097c NC_008596.1 Mycobrowser_v3 CDS 3963990 3964871 . + 0 MSMEG_3891 MSMEG_3891 hydrolase identified by match to protein family HMM PF00561 A0QZ43 No unknown NC_008596.1 Mycobrowser_v3 CDS 3964940 3965479 . + 0 MSMEG_3892 MSMEG_3892 hypothetical protein identified by Glimmer2; putative A0QZ44,A4ZHT0 No unknown NC_008596.1 Mycobrowser_v3 CDS 3965476 3966558 . + 0 MSMEG_3893 MSMEG_3893 hypothetical protein identified by Glimmer2; putative A0QZ45 No unknown NC_008596.1 Mycobrowser_v3 CDS 3966564 3967304 . - 0 MSMEG_3894 MSMEG_3894 proteasome alpha subunit identified by match to protein family HMM PF00227 A0QZ46 No unknown Rv2109c Rv2109c NC_008596.1 Mycobrowser_v3 CDS 3967301 3968143 . - 0 MSMEG_3895 MSMEG_3895 proteasome beta subunit identified by match to protein family HMM PF00227 A0QZ47 No unknown Rv2110c Rv2110c NC_008596.1 Mycobrowser_v3 CDS 3968511 3970007 . - 0 MSMEG_3897 MSMEG_3897 proteasome component identified by match to protein family HMM PF03136; match to protein family HMM PF03316 A0QZ49 No unknown Rv2112c Rv2112c NC_008596.1 Mycobrowser_v3 CDS 3970017 3970934 . - 0 MSMEG_3898 thpD ectoine hydroxylase identified by match to protein family HMM PF05721; match to protein family HMM TIGR02408 A0QZ50 No unknown NC_008596.1 Mycobrowser_v3 CDS 3970964 3971356 . - 0 MSMEG_3899 ectC ectoine synthase identified by match to protein family HMM PF06339; match to protein family HMM PF07883 A0QZ51 No unknown NC_008596.1 Mycobrowser_v3 CDS 3971368 3972654 . - 0 MSMEG_3900 ectB diaminobutyrate--2-oxoglutarate aminotransferase identified by match to protein family HMM PF00202; match to protein family HMM TIGR00709; match to protein family HMM TIGR02407 A0QZ52 No unknown NC_008596.1 Mycobrowser_v3 CDS 3972734 3973267 . - 0 MSMEG_3901 ectA L-2,4-diaminobutyric acid acetyltransferase identified by match to protein family HMM PF00583; match to protein family HMM TIGR02406 A0QZ53 No unknown NC_008596.1 Mycobrowser_v3 CDS 3974235 3976076 . - 0 MSMEG_3902 MSMEG_3902 ATPase, AAA family protein identified by match to protein family HMM PF00004 A0QZ54 No unknown Rv2115c Rv2115c NC_008596.1 Mycobrowser_v3 CDS 3976222 3976725 . + 0 MSMEG_3903 MSMEG_3903 Low molecular weight antigen MTB12 A0QZ55 No unknown Rv2376c Rv2376c NC_008596.1 Mycobrowser_v3 CDS 3976734 3977297 . + 0 MSMEG_3904 MSMEG_3904 LppK protein A0QZ56 No unknown Rv2116 Rv2116 NC_008596.1 Mycobrowser_v3 CDS 3977303 3977596 . + 0 MSMEG_3905 MSMEG_3905 conserved hypothetical protein identified by match to protein family HMM PF04456 A0QZ57 No unknown Rv2117 Rv2117 NC_008596.1 Mycobrowser_v3 CDS 3977602 3978450 . - 0 MSMEG_3906 MSMEG_3906 tRNA (adenine-N(1)-)-methyltransferase A0QZ58 No unknown Rv2118c Rv2118c NC_008596.1 Mycobrowser_v3 CDS 3968209 3968403 . - 0 MSMEG_3896 pup conserved hypothetical protein identified by match to protein family HMM PF05639 A0QZ48 No unknown Rv2111c Rv2111c NC_008596.1 Mycobrowser_v3 CDS 3978534 3979409 . + 0 MSMEG_3907 MSMEG_3907 RecB family protein exonuclease A0QZ59 No unknown Rv2119 Rv2119 NC_008596.1 Mycobrowser_v3 CDS 3979406 3980203 . + 0 MSMEG_3908 MSMEG_3908 conserved hypothetical protein A0QZ60 No unknown NC_008596.1 Mycobrowser_v3 CDS 3982213 3983361 . + 0 MSMEG_3914 MSMEG_3914 beta-lactamase identified by match to protein family HMM PF00144 A0QZ65 No unknown NC_008596.1 Mycobrowser_v3 CDS 3983780 3984850 . - 0 MSMEG_3915 MSMEG_3915 NAD-dependent alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QZ66 No unknown NC_008596.1 Mycobrowser_v3 CDS 3984847 3985164 . - 0 MSMEG_3916 MSMEG_3916 hypothetical protein identified by Glimmer2; putative A0QZ67 No unknown NC_008596.1 Mycobrowser_v3 CDS 3987401 3988021 . + 0 MSMEG_3919 MSMEG_3919 hypothetical protein identified by Glimmer2; putative A0QZ70 No unknown NC_008596.1 Mycobrowser_v3 CDS 3988011 3988562 . + 0 MSMEG_3920 MSMEG_3920 hypothetical protein identified by Glimmer2; putative A0QZ71 No unknown NC_008596.1 Mycobrowser_v3 CDS 3988559 3989284 . + 0 MSMEG_3922 MSMEG_3922 hypothetical protein identified by Glimmer2; putative A0QZ72 No unknown NC_008596.1 Mycobrowser_v3 CDS 3989281 3990024 . - 0 MSMEG_3921 MSMEG_3921 hypothetical protein identified by Glimmer2; putative A0QZ73 No unknown NC_008596.1 Mycobrowser_v3 CDS 3990221 3990724 . + 0 MSMEG_3923 MSMEG_3923 conserved hypothetical protein identified by match to protein family HMM PF04978 A0QZ74 No unknown NC_008596.1 Mycobrowser_v3 CDS 3990727 3991974 . - 0 MSMEG_3924 MSMEG_3924 peptide synthetase ScpsB, putative identified by match to protein family HMM PF00668 A0QZ75 No unknown NC_008596.1 Mycobrowser_v3 CDS 3992167 3993123 . + 0 MSMEG_3925 MSMEG_3925 AttM/AiiB family protein identified by match to protein family HMM PF00753 A0QZ76 No unknown NC_008596.1 Mycobrowser_v3 CDS 3993256 3996024 . - 0 MSMEG_3926 MSMEG_3926 cation-transporting ATPase Pma1 identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494 A0QZ77 No unknown Rv1997 Rv1997 NC_008596.1 Mycobrowser_v3 CDS 3996059 3996526 . - 0 MSMEG_3927 MSMEG_3927 peptidase M52, hydrogen uptake protein identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072 A0QZ78 No unknown NC_008596.1 Mycobrowser_v3 CDS 3996523 3997815 . - 0 MSMEG_3928 MSMEG_3928 [NiFe] hydrogenase, alpha subunit, putative identified by match to protein family HMM PF00374 A0QZ79 No unknown NC_008596.1 Mycobrowser_v3 CDS 3997812 3998570 . - 0 MSMEG_3929 MSMEG_3929 [NiFe] hydrogenase, delta subunit, putative identified by match to protein family HMM PF01058 A0QZ80 No unknown NC_008596.1 Mycobrowser_v3 CDS 3998571 3999386 . - 0 MSMEG_3930 MSMEG_3930 [NiFe] hydrogenase, gamma subunit, putative identified by match to protein family HMM PF00175 A0QZ81 No unknown NC_008596.1 Mycobrowser_v3 CDS 3999400 4000485 . - 0 MSMEG_3931 MSMEG_3931 [NiFe] hydrogenase, beta subunit, putative identified by match to protein family HMM PF00037 A0QZ82 No unknown NC_008596.1 Mycobrowser_v3 CDS 4000508 4000945 . - 0 MSMEG_3932 MSMEG_3932 14 kDa antigen identified by match to protein family HMM PF00011 A0QZ83 No unknown Rv2031c Rv2031c NC_008596.1 Mycobrowser_v3 CDS 4030440 4030958 . + 0 MSMEG_3960 MSMEG_3960 transcriptional regulator identified by match to protein family HMM PF00440 A0QZB1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4001317 4003635 . + 0 MSMEG_3934 MSMEG_3934 phosphoenolpyruvate synthase identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896 A0QZ84 No unknown NC_008596.1 Mycobrowser_v3 CDS 4003514 4004869 . - 0 MSMEG_3933 MSMEG_3933 conserved hypothetical protein identified by match to protein family HMM PF03007 A0QZ85 No unknown NC_008596.1 Mycobrowser_v3 CDS 4004936 4005712 . - 0 MSMEG_3935 MSMEG_3935 conserved hypothetical protein A0QZ86 No unknown Rv0079 Rv0079 NC_008596.1 Mycobrowser_v3 CDS 4005847 4006746 . - 0 MSMEG_3936 MSMEG_3936 universal stress protein family protein identified by match to protein family HMM PF00582 A0QZ87 No unknown NC_008596.1 Mycobrowser_v3 CDS 4006743 4007213 . - 0 MSMEG_3937 MSMEG_3937 conserved hypothetical protein A0QZ88 No unknown NC_008596.1 Mycobrowser_v3 CDS 4006998 4007264 . + 0 MSMEG_3938 MSMEG_3938 hypothetical protein identified by Glimmer2; putative A0QZ89 No unknown NC_008596.1 Mycobrowser_v3 CDS 4007445 4008236 . + 0 MSMEG_3939 MSMEG_3939 universal stress protein family protein identified by match to protein family HMM PF00582 A0QZ90 No unknown Rv2624c Rv2624c NC_008596.1 Mycobrowser_v3 CDS 4008412 4009293 . + 0 MSMEG_3940 MSMEG_3940 universal stress protein family protein identified by match to protein family HMM PF00582 A0QZ91 No unknown Rv2026c Rv2026c NC_008596.1 Mycobrowser_v3 CDS 4009310 4010953 . - 0 MSMEG_3941 MSMEG_3941 GAF family protein identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730 A0QZ92 No unknown NC_008596.1 Mycobrowser_v3 CDS 4011176 4012672 . - 0 MSMEG_3942 MSMEG_3942 conserved hypothetical protein A0QZ93 No unknown Rv2004c Rv2004c NC_008596.1 Mycobrowser_v3 CDS 4012832 4013794 . + 0 MSMEG_3943 MSMEG_3943 conserved hypothetical protein A0QZ94 No unknown Rv2032 Rv2032 NC_008596.1 Mycobrowser_v3 CDS 4013788 4014441 . + 0 MSMEG_3944 MSMEG_3944 two component transcriptional regulatory protein devr identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0QZ95 No unknown Rv3133c Rv3133c NC_008596.1 Mycobrowser_v3 CDS 4014443 4015264 . - 0 MSMEG_3945 MSMEG_3945 universal stress protein family protein identified by match to protein family HMM PF00582 A0QZ96 No unknown Rv1996,Rv2005c,Rv2623 Rv1996,Rv2005c,Rv2623 NC_008596.1 Mycobrowser_v3 CDS 4015330 4015905 . - 0 MSMEG_3946 MSMEG_3946 probable conserved transmembrane protein A0QZ97 No unknown NC_008596.1 Mycobrowser_v3 CDS 4093304 4093456 . - 0 MSMEG_4021 MSMEG_4021 hypothetical protein identified by Glimmer2; putative A0QZG9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4016065 4017468 . + 0 MSMEG_3948 MSMEG_3948 acyltransferase, ws/dgat/mgat subfamily protein identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946 A0QZ98 No unknown Rv3130c Rv3130c NC_008596.1 Mycobrowser_v3 CDS 4017452 4018450 . - 0 MSMEG_3947 MSMEG_3947 6-phosphofructokinase isozyme 2 identified by match to protein family HMM PF00294 A0QZ99 No unknown Rv2029c Rv2029c NC_008596.1 Mycobrowser_v3 CDS 4018666 4018917 . + 0 MSMEG_3949 MSMEG_3949 hypothetical protein identified by Glimmer2; putative A0QZA0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4019051 4019935 . + 0 MSMEG_3950 MSMEG_3950 universal stress protein family protein identified by match to protein family HMM PF00582 A0QZA1 No unknown Rv2026c Rv2026c NC_008596.1 Mycobrowser_v3 CDS 4020005 4020961 . + 0 MSMEG_3952 MSMEG_3952 conserved hypothetical protein A0QZA2,A4ZHT1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4020929 4021870 . - 0 MSMEG_3951 MSMEG_3951 conserved hypothetical protein A0QZA3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4021891 4022955 . - 0 MSMEG_3953 MSMEG_3953 conserved hypothetical protein A0QZA4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4023070 4025790 . + 0 MSMEG_3954 MSMEG_3954 trehalose 6-phosphate phosphorylase identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636 A0QZA5 No unknown Rv2006 Rv2006 NC_008596.1 Mycobrowser_v3 CDS 4025793 4026797 . - 0 MSMEG_3955 MSMEG_3955 conserved hypothetical protein A0QZA6 No unknown Rv3131 Rv3131 NC_008596.1 Mycobrowser_v3 CDS 4026826 4027116 . - 0 MSMEG_3956 MSMEG_3956 alkylhydroperoxidase AhpD A0QZA7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4120239 4121222 . - 0 MSMEG_4048 MSMEG_4048 cyclase A0QZJ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4027120 4028703 . - 0 MSMEG_3957 MSMEG_3957 conserved 13e12 repeat family protein identified by match to protein family HMM PF01844; match to protein family HMM PF02720 A0QZA8 No unknown Rv2100,Rv3776 Rv2100,Rv3776 NC_008596.1 Mycobrowser_v3 CDS 4028808 4029335 . - 0 MSMEG_3958 MSMEG_3958 glyoxalase/bleomycin resistance protein/dioxygenase A0QZA9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4029539 4030411 . + 0 MSMEG_3959 MSMEG_3959 transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QZB0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4657101 4658643 . - 0 MSMEG_4566 MSMEG_4566 conserved 13e12 repeat family protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4030991 4031584 . + 0 MSMEG_3961 MSMEG_3961 transcriptional regulator identified by match to protein family HMM PF00440 A0QZB2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4031670 4032854 . - 0 MSMEG_3962 MSMEG_3962 lactate 2-monooxygenase identified by match to protein family HMM PF01070 A0QZB3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4033091 4033297 . - 0 MSMEG_3963 MSMEG_3963 hypothetical protein identified by Glimmer2; putative A0QZB4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4033163 4034893 . + 0 MSMEG_3964 MSMEG_3964 pyruvate dehydrogenase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 A0QZB5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4034909 4035196 . + 0 MSMEG_3965 MSMEG_3965 hypothetical protein identified by Glimmer2; putative A0QZB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4035225 4035536 . + 0 MSMEG_3966 MSMEG_3966 hypothetical protein identified by Glimmer2; putative A0QZB7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4035550 4036224 . - 0 MSMEG_3967 MSMEG_3967 TonB-dependent receptor identified by match to protein family HMM PF02082; match to protein family HMM PF08220 A0QZB8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4035904 4036752 . + 0 MSMEG_3971 MSMEG_3971 hypothetical protein identified by Glimmer2; putative A0QZB9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4036208 4036456 . - 0 MSMEG_3968 MSMEG_3968 hypothetical protein identified by Glimmer2; putative A0QZC0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4036264 4036668 . - 0 MSMEG_3969 MSMEG_3969 hypothetical protein identified by Glimmer2; putative A0QZC1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4036718 4038121 . - 0 MSMEG_3970 MSMEG_3970 glutamyl-tRNA(Gln) amidotransferase subunit A identified by match to protein family HMM PF01425 A0QZC2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4038226 4039044 . + 0 MSMEG_3972 MSMEG_3972 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QZC3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5632606 5632887 . - 0 MSMEG_5542 MSMEG_5542 transcriptional regulator, HTH_3 family protein identified by match to protein family HMM PF01381 A0R3P1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4059480 4060481 . - 0 MSMEG_3988 MSMEG_3988 transcriptional regulator, AsnC family protein identified by match to protein family HMM PF01037 A0QZD6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4039051 4041021 . - 0 MSMEG_3973 MSMEG_3973 N-methylhydantoinase identified by match to protein family HMM PF02538 A0QZC4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4043213 4044805 . + 0 MSMEG_3975 MSMEG_3975 regulatory protein, putative identified by match to protein family HMM PF07905 A0QZC5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4045146 4045796 . - 0 MSMEG_3976 MSMEG_3976 DNA-binding protein identified by match to protein family HMM PF00440 A0QZC6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4045998 4046852 . + 0 MSMEG_3977 MSMEG_3977 conserved hypothetical protein identified by match to protein family HMM PF00296 A0QZC7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4046936 4048078 . + 0 MSMEG_3978 MSMEG_3978 beta-lactamase identified by match to protein family HMM PF00144 A0QZC8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4049025 4049669 . - 0 MSMEG_3980 MSMEG_3980 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QZC9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4049735 4050916 . - 0 MSMEG_3981 MSMEG_3981 L-carnitine dehydratase/bile acid-inducible protein F identified by match to protein family HMM PF02515 A0QZD0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4050913 4052046 . - 0 MSMEG_3982 MSMEG_3982 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QZD1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4053599 4054810 . + 0 MSMEG_3984 MSMEG_3984 Transposase IS116/IS110/IS902 family protein identified by match to protein family HMM PF01548; match to protein family HMM PF02371 A0QZD2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4055023 4056354 . + 0 MSMEG_3985 MSMEG_3985 integral membrane transport protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QZD3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4056401 4058032 . + 0 MSMEG_3986 MSMEG_3986 acetyl-coenzyme A synthetase identified by match to protein family HMM PF00501 A0QZD4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4058087 4059460 . + 0 MSMEG_3987 MSMEG_3987 FAD dependent oxidoreductase identified by match to protein family HMM PF00890; match to protein family HMM PF01266 A0QZD5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4060590 4061819 . + 0 MSMEG_3989 MSMEG_3989 peptidase M20D, amidohydrolase identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891 A0QZD7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4061819 4063096 . + 0 MSMEG_3990 MSMEG_3990 putative transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QZD8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4063093 4063911 . + 0 MSMEG_3991 MSMEG_3991 cyclase identified by match to protein family HMM PF04199 A0QZD9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4063918 4065294 . - 0 MSMEG_3992 MSMEG_3992 integral membrane transport protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QZE0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4065447 4066229 . - 0 MSMEG_3993 MSMEG_3993 Asp/Glu racemase identified by match to protein family HMM PF01177 A0QZE1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4066219 4067007 . - 0 MSMEG_3994 MSMEG_3994 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QZE2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4067064 4068380 . - 0 MSMEG_3995 MSMEG_3995 N-carbamoyl-L-amino acid amidohydrolase identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879 A0QZE3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4068425 4069888 . - 0 MSMEG_3996 hydA dihydropyrimidinase identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033 A0QZE4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4070103 4071197 . + 0 MSMEG_3997 MSMEG_3997 regulatory protein A0QZE5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4071433 4072320 . - 0 MSMEG_3998 MSMEG_3998 MmsAB operon regulatory protein identified by match to protein family HMM PF00165; match to protein family HMM PF02311 A0QZE6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4072558 4073547 . + 0 MSMEG_3999 MSMEG_3999 ABC transporter periplasmic-binding protein YphF identified by match to protein family HMM PF00532 A0QZE7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4073608 4075119 . + 0 MSMEG_4000 MSMEG_4000 hypothetical ABC transporter ATP-binding protein YphE identified by match to protein family HMM PF00005 A0QZE8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4185948 4186634 . - 0 MSMEG_4107 MSMEG_4107 phosphoglycerate mutase, putative A0QZQ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4075142 4076146 . + 0 MSMEG_4001 MSMEG_4001 ribose transport system permease protein RbsC identified by match to protein family HMM PF02653 A0QZE9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4076191 4077273 . + 0 MSMEG_4002 MSMEG_4002 oxidoreductase, zinc-binding dehydrogenase family protein identified by match to protein family HMM PF00107 A0QZF0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4077270 4078223 . + 0 MSMEG_4003 MSMEG_4003 conserved hypothetical protein A0QZF1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5842827 5843261 . - 0 MSMEG_5769 MSMEG_5769 hypothetical protein identified by Glimmer2; putative A0R4B0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4078220 4078969 . + 0 MSMEG_4004 MSMEG_4004 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106 A0QZF2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4078966 4079841 . + 0 MSMEG_4005 MSMEG_4005 calcium-binding protein A0QZF3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4079904 4081382 . - 0 MSMEG_4006 MSMEG_4006 transcriptional regulator, CdaR, putative identified by match to protein family HMM PF02954 A0QZF4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4081401 4082390 . + 0 MSMEG_4007 MSMEG_4007 oxidoreductase, 2OG-Fe(II) oxygenase family protein identified by match to protein family HMM PF03171 A0QZF5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4082574 4083587 . + 0 MSMEG_4008 MSMEG_4008 oxidoreductase, 2OG-Fe(II) oxygenase family protein identified by match to protein family HMM PF03171 A0QZF6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4083529 4083852 . + 0 MSMEG_4009 MSMEG_4009 vanillate O-demethylase oxidoreductase identified by match to protein family HMM PF00111 A0QZF7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4083868 4084278 . + 0 MSMEG_4010 MSMEG_4010 glyoxalase family protein identified by match to protein family HMM PF00903 A0QZF8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4084288 4085598 . + 0 MSMEG_4011 MSMEG_4011 putative pyrimidine permease RutG identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801 A0QZF9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4085598 4087019 . + 0 MSMEG_4012 hydA dihydropyrimidinase identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02033 A0QZG0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4087035 4088054 . + 0 MSMEG_4013 MSMEG_4013 oxidoreductase identified by match to protein family HMM PF00296 A0QZG1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4088051 4089346 . + 0 MSMEG_4014 MSMEG_4014 N-carbamoyl-L-amino acid amidohydrolase identified by match to protein family HMM PF01546; match to protein family HMM TIGR01879 A0QZG2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4089826 4090581 . - 0 MSMEG_4018 MSMEG_4018 nucleotidyltransferase domain protein identified by match to protein family HMM PF01909 A0QZG6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4090775 4092508 . - 0 MSMEG_4019 MSMEG_4019 AMP-dependent synthetase and ligase identified by match to protein family HMM PF00501 A0QZG7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4092516 4093307 . - 0 MSMEG_4020 MSMEG_4020 enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 A0QZG8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4093747 4094346 . + 0 MSMEG_4022 MSMEG_4022 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QZH0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4094612 4096099 . - 0 MSMEG_4023 MSMEG_4023 oxidoreductase identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992 A0QZH1 No unknown Rv0794c Rv0794c NC_008596.1 Mycobrowser_v3 CDS 4096520 4097857 . - 0 MSMEG_4024 MSMEG_4024 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0QZH2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4097995 4098918 . - 0 MSMEG_4025 MSMEG_4025 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QZH3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4099556 4099693 . + 0 MSMEG_4026 MSMEG_4026 hypothetical protein identified by Glimmer2; putative A0QZH4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4099750 4100754 . + 0 MSMEG_4027 MSMEG_4027 zinc-containing alcohol dehydrogenase superfamily protein identified by match to protein family HMM PF00107 A0QZH5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4100797 4101018 . - 0 MSMEG_4028 MSMEG_4028 hypothetical protein identified by Glimmer2; putative A0QZH6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4101244 4101849 . - 0 MSMEG_4029 MSMEG_4029 conserved hypothetical protein identified by match to protein family HMM PF07336 A0QZH7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4102269 4102760 . + 0 MSMEG_4030 MSMEG_4030 conserved hypothetical protein identified by match to protein family HMM PF04224 A0QZH8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4102959 4103162 . + 0 MSMEG_4031 MSMEG_4031 hypothetical protein identified by Glimmer2; putative A0QZH9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4103378 4104352 . - 0 MSMEG_4032 MSMEG_4032 zinc-binding alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QZI0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4104476 4105129 . + 0 MSMEG_4033 MSMEG_4033 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0QZI1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4105207 4106040 . + 0 MSMEG_4034 MSMEG_4034 NAD dependent epimerase/dehydratase family protein identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993 A0QZI2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4106113 4106928 . - 0 MSMEG_4035 MSMEG_4035 citrate synthase A0QZI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4106918 4108465 . - 0 MSMEG_4036 MSMEG_4036 crotonobetaine/carnitine-CoA ligase identified by match to protein family HMM PF00501 A0QZI4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4108522 4108932 . - 0 MSMEG_4037 MSMEG_4037 hypothetical protein identified by Glimmer2; putative A0QZI5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4109489 4110982 . + 0 MSMEG_4038 MSMEG_4038 vanillin dehydrogenase identified by match to protein family HMM PF00171 A0QZI6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4110996 4112135 . + 0 MSMEG_4039 MSMEG_4039 aryl-alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QZI7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4112188 4112853 . + 0 MSMEG_4040 MSMEG_4040 nitroreductase identified by match to protein family HMM PF00881 A0QZI8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4113063 4113947 . + 0 MSMEG_4041 MSMEG_4041 hydroxyquinol 1,2-dioxygenase identified by match to protein family HMM PF00775; match to protein family HMM PF04444 A0QZI9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4114106 4114864 . + 0 MSMEG_4042 MSMEG_4042 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QZJ0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4114887 4115840 . + 0 MSMEG_4043 MSMEG_4043 amidohydrolase 2 identified by match to protein family HMM PF04909 A0QZJ1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4115906 4117693 . - 0 MSMEG_4044 MSMEG_4044 GAF domain protein identified by match to protein family HMM PF01590 A0QZJ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4117738 4118019 . - 0 MSMEG_4045 MSMEG_4045 muconolactone delta-isomerase identified by match to protein family HMM PF02426 A0QZJ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4118016 4119176 . - 0 MSMEG_4046 MSMEG_4046 L-carnitine dehydratase/bile acid-inducible protein F identified by match to protein family HMM PF02515 A0QZJ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4119176 4120141 . - 0 MSMEG_4047 MSMEG_4047 dihydropteroate synthase identified by match to protein family HMM PF00753 A0QZJ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4121265 4122713 . - 0 MSMEG_4049 MSMEG_4049 sugar transporter, permease protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QZJ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4122773 4123459 . - 0 MSMEG_4050 MSMEG_4050 hypothetical protein identified by Glimmer2; putative A0QZJ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4123604 4123735 . - 0 MSMEG_4051 MSMEG_4051 hypothetical protein identified by Glimmer2; putative A0QZJ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4123732 4123893 . - 0 MSMEG_4052 MSMEG_4052 hypothetical protein identified by Glimmer2; putative A0QZK0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4141631 4142620 . - 0 MSMEG_4067 MSMEG_4067 zinc-containing alcohol dehydrogenase superfamily protein identified by match to protein family HMM PF00107 A0QZL5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4124109 4126841 . - 0 MSMEG_4053 MSMEG_4053 transcriptional regulatory protein identified by match to protein family HMM PF00196 A0QZK1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4126850 4126984 . - 0 MSMEG_4054 MSMEG_4054 hypothetical protein identified by Glimmer2; putative A0QZK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4127253 4128044 . + 0 MSMEG_4055 MSMEG_4055 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0QZK3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4128118 4128876 . + 0 MSMEG_4056 MSMEG_4056 conserved secreted protein A0QZK4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4129302 4129928 . + 0 MSMEG_4057 MSMEG_4057 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QZK5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4129996 4131315 . + 0 MSMEG_4058 MSMEG_4058 major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QZK6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4131375 4132064 . + 0 MSMEG_4059 MSMEG_4059 haloacid dehalogenase, type II identified by match to protein family HMM PF00702; match to protein family HMM TIGR01493 A0QZK7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4133329 4133757 . + 0 MSMEG_4061 MSMEG_4061 translation initiation inhibitor identified by match to protein family HMM PF01042 A0QZK8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4133790 4135040 . + 0 MSMEG_4062 MSMEG_4062 glutamyl-tRNA(Gln) amidotransferase subunit A identified by match to protein family HMM PF01425 A0QZK9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4135328 4136236 . - 0 MSMEG_4063 MSMEG_4063 amidohydrolase family protein identified by match to protein family HMM PF04909 A0QZL0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4136734 4137735 . - 0 MSMEG_4064 MSMEG_4064 zinc-binding alcohol dehydrogenase identified by match to protein family HMM PF00107 A0QZL1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4138269 4139831 . - 0 MSMEG_4065 MSMEG_4065 feruloyl-CoA synthetase identified by match to protein family HMM PF00501 A0QZL2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4139932 4141287 . - 0 MSMEG_4066 MSMEG_4066 conserved hypothetical protein A0QZL3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4141519 4141653 . + 0 MSMEG_4068 MSMEG_4068 hypothetical protein identified by Glimmer2; putative A0QZL4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4142735 4143292 . + 0 MSMEG_4070 MSMEG_4070 transcriptional regulator, TetR family protein, putative A0QZL7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4144114 4145160 . + 0 MSMEG_4072 MSMEG_4072 ISMsm5, transposase identified by similarity to GB:CAD18826.1 A0QZL8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4146668 4147465 . + 0 MSMEG_4074 MSMEG_4074 peroxisomal trans-2-enoyl-CoA reductase identified by match to protein family HMM PF00106 A0QZL9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4147462 4149525 . + 0 MSMEG_4075 MSMEG_4075 CoA-binding protein identified by match to protein family HMM PF02629 A0QZM0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4149545 4150744 . + 0 MSMEG_4076 MSMEG_4076 butyryl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QZM1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4150741 4151499 . + 0 MSMEG_4077 MSMEG_4077 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0QZM2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4151496 4152893 . + 0 MSMEG_4078 MSMEG_4078 hypothetical metabolite transport protein YaaU identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QZM3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4152916 4153683 . - 0 MSMEG_4079 MSMEG_4079 putative hydrolase identified by match to protein family HMM PF00561 A0QZM4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4215569 4216120 . - 0 MSMEG_4135 MSMEG_4135 possible lysine decarboxylase superfamily protein identified by match to protein family HMM PF03641 A0QZS8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4155111 4156322 . + 0 MSMEG_4081 MSMEG_4081 Transposase IS116/IS110/IS902 family protein identified by match to protein family HMM PF01548; match to protein family HMM PF02371 A0QVP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4157064 4158410 . - 0 MSMEG_4082 MSMEG_4082 monoxygenase A0QZM6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4158407 4159822 . - 0 MSMEG_4083 MSMEG_4083 putative monooxygenase A0QZM7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4159822 4160979 . - 0 MSMEG_4084 MSMEG_4084 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF02770; match to protein family HMM PF08028 A0QZM8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4161044 4162327 . - 0 MSMEG_4085 MSMEG_4085 nitrilotriacetate monooxygenase component A A0QZM9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4162324 4162905 . - 0 MSMEG_4086 ssuD nitrilotriacetate monooxygenase component A A0QZN0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4162983 4164401 . - 0 MSMEG_4087 MSMEG_4087 major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QZN1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4164825 4165133 . + 0 MSMEG_4088 MSMEG_4088 transposase identified by match to protein family HMM PF01527 A0QZN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4165130 4165990 . + 0 MSMEG_4089 MSMEG_4089 transposase subunit identified by match to protein family HMM PF00665 A0QZN3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4166046 4166819 . + 0 MSMEG_4090 MSMEG_4090 putative IclR family protein transcriptional regulator identified by match to protein family HMM PF01614 A0QZN4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4167383 4168717 . - 0 MSMEG_4091 ssuD nitrilotriacetate monooxygenase component A A0QZN5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4168736 4169806 . - 0 MSMEG_4092 MSMEG_4092 alkanal monooxygenase identified by match to protein family HMM PF00296 A0QZN6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4169808 4170839 . - 0 MSMEG_4093 MSMEG_4093 oxidoreductase, aldo/keto reductase family protein identified by match to protein family HMM PF00248 A0QZN7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4216158 4216742 . - 0 MSMEG_4136 MSMEG_4136 dTDP-glucose 4,6-dehydratase A0QZS9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4170932 4172143 . - 0 MSMEG_4094 MSMEG_4094 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0QZN8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4172140 4173057 . - 0 MSMEG_4095 MSMEG_4095 putative monooxygenase A0QZN9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4173054 4174289 . - 0 MSMEG_4096 ssuD nitrilotriacetate monooxygenase component A A0QZP0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4174286 4175515 . - 0 MSMEG_4097 MSMEG_4097 acyl-CoA dehydrogenase domain protein identified by match to protein family HMM PF08028 A0QZP1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4175512 4177173 . - 0 MSMEG_4098 MSMEG_4098 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0QZP2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4177170 4178078 . - 0 MSMEG_4099 MSMEG_4099 ABC transporter permease protein identified by match to protein family HMM PF00528 A0QZP3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4178075 4179127 . - 0 MSMEG_4100 MSMEG_4100 ABC transporter permease protein identified by match to protein family HMM PF00528 A0QZP4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4179138 4180772 . - 0 MSMEG_4101 MSMEG_4101 ABC-type transporter, substrate binding protein identified by match to protein family HMM PF00496 A0QZP5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4181131 4182240 . + 0 MSMEG_4102 MSMEG_4102 conserved hypothetical protein A0QZP6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4182282 4183370 . + 0 MSMEG_4103 MSMEG_4103 alkanesulfonate monooxygenase identified by match to protein family HMM PF00296 A0QZP7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4183367 4184623 . + 0 MSMEG_4104 MSMEG_4104 transporter, major facilitator family protein identified by match to protein family HMM PF07690 A0QZP8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4184704 4185564 . - 0 MSMEG_4105 MSMEG_4105 transposase subunit identified by match to protein family HMM PF00665 A0QZN3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4185561 4185869 . - 0 MSMEG_4106 MSMEG_4106 transposase identified by match to protein family HMM PF01527 A0QZN2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4186644 4188083 . - 0 MSMEG_4108 pntB NAD(P) transhydrogenase, beta subunit identified by similarity to SP:P07002; match to protein family HMM PF02233 A0QZQ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5632985 5633326 . - 0 MSMEG_5543 MSMEG_5543 hypothetical protein identified by Glimmer2; putative A0R3P2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4188102 4189649 . - 0 MSMEG_4109 pntA NAD(P) transhydrogenase, alpha subunit identified by similarity to SP:P07001; match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00561 A0QZQ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4189781 4190623 . - 0 MSMEG_4110 MSMEG_4110 3-hydroxyacyl-CoA dehydrogenase identified by match to protein family HMM PF00725; match to protein family HMM PF02737 A0QZQ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4190676 4191806 . - 0 MSMEG_4111 MSMEG_4111 alpha-methylacyl-CoA racemase identified by match to protein family HMM PF02515 A0QZQ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4206211 4206993 . - 0 MSMEG_4125 MSMEG_4125 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0QZR9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4191803 4193470 . - 0 MSMEG_4112 MSMEG_4112 cyclohexanecarboxylate-CoA ligase identified by match to protein family HMM PF00501 A0QZQ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4193473 4194528 . - 0 MSMEG_4113 MSMEG_4113 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0QZQ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4194525 4195301 . - 0 MSMEG_4114 menB naphthoate synthase identified by match to protein family HMM PF00378 A0QZQ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4195303 4196184 . - 0 MSMEG_4115 MSMEG_4115 3-hydroxybutyryl-CoA dehydrogenase identified by match to protein family HMM PF00725; match to protein family HMM PF02737 A0QZQ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4196194 4197084 . - 0 MSMEG_4116 MSMEG_4116 3-hydroxybutyryl-CoA dehydrogenase identified by match to protein family HMM PF00725; match to protein family HMM PF02737 A0QZR0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4197104 4197868 . - 0 MSMEG_4117 MSMEG_4117 2-deoxy-D-gluconate 3-dehydrogenase identified by match to protein family HMM PF00106 A0QZR1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4197865 4199088 . - 0 MSMEG_4118 MSMEG_4118 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0QZR2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4199085 4199873 . - 0 MSMEG_4119 MSMEG_4119 3-hydroxybutyryl-CoA dehydratase identified by match to protein family HMM PF00378 A0QZR3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4199870 4201099 . - 0 MSMEG_4120 MSMEG_4120 CAIB/BAIF family protein identified by match to protein family HMM PF02515 A0QZR4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4201359 4202099 . - 0 MSMEG_4121 MSMEG_4121 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0QZR5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4202248 4203609 . - 0 MSMEG_4122 MSMEG_4122 major facilitator family protein transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0QZR6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4203971 4204870 . + 0 MSMEG_4123 MSMEG_4123 3-hydroxyisobutyrate dehydrogenase identified by match to protein family HMM PF03446 A0QZR7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4204972 4206159 . + 0 MSMEG_4124 MSMEG_4124 conserved hypothetical protein A0QZR8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4645741 4646238 . + 0 MSMEG_4553 MSMEG_4553 GAF domain, putative identified by match to protein family HMM PF01590 A0R0Y6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4207206 4207916 . + 0 MSMEG_4126 MSMEG_4126 hydrolase, isochorismatase family protein identified by match to protein family HMM PF00857 A0QZS0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4208139 4209542 . - 0 MSMEG_4127 MSMEG_4127 TnpC protein identified by match to protein family HMM PF01609 A0QZS1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4209578 4210414 . - 0 MSMEG_4128 MSMEG_4128 conserved hypothetical protein A0QZS2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4210513 4211103 . + 0 MSMEG_4129 MSMEG_4129 hypothetical protein identified by Glimmer2; putative A0QZS3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4211146 4211262 . + 0 MSMEG_4131 MSMEG_4131 hypothetical protein identified by Glimmer2; putative A0QZS4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4211259 4212110 . - 0 MSMEG_4130 MSMEG_4130 polysaccharide deacetylase family protein identified by match to protein family HMM PF01522 A0QZS5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4212404 4212793 . + 0 MSMEG_4132 MSMEG_4132 putative transposase A0QZS6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4212793 4213806 . + 0 MSMEG_4133 MSMEG_4133 transposase identified by match to protein family HMM PF00665 A0QT62 No unknown NC_008596.1 Mycobrowser_v3 CDS 4216742 4216960 . - 0 MSMEG_4137 MSMEG_4137 hypothetical protein identified by Glimmer2; putative A0QZT0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4217351 4218319 . + 0 MSMEG_4138 MSMEG_4138 aliphatic nitrilase identified by match to protein family HMM PF00795 A0QZT1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4276933 4277454 . - 0 MSMEG_4199 MSMEG_4199 conserved hypothetical protein identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481 A0QZZ0 No unknown Rv2140c Rv2140c NC_008596.1 Mycobrowser_v3 CDS 4219709 4221142 . + 0 MSMEG_4140 MSMEG_4140 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00155; match to protein family HMM PF00392 A0QZT2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4221338 4222225 . + 0 MSMEG_4141 MSMEG_4141 conserved hypothetical protein A0QZT3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4222396 4223022 . - 0 MSMEG_4142 MSMEG_4142 transcriptional repressor, TetR family protein, putative A0QZT4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4223158 4223451 . + 0 MSMEG_4143 MSMEG_4143 conserved hypothetical protein identified by match to protein family HMM PF07045 A0QZT5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4344261 4344872 . + 0 MSMEG_4260 MSMEG_4260 cytochrome c oxidase subunit 3 identified by match to protein family HMM PF00510 A0R049 No unknown Rv2193 Rv2193 NC_008596.1 Mycobrowser_v3 CDS 4223495 4224433 . + 0 MSMEG_4144 MSMEG_4144 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0QZT6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4224738 4225301 . - 0 MSMEG_4145 MSMEG_4145 cupin 2 protein identified by match to protein family HMM PF07883 A0QZT7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4225664 4226641 . + 0 MSMEG_4146 MSMEG_4146 quinone oxidoreductase identified by match to protein family HMM PF00107 A0QZT8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4226696 4227970 . + 0 MSMEG_4147 MSMEG_4147 major facilitator superfamily protein MFS_1, putative identified by match to protein family HMM PF07690 A0QZT9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4228090 4229016 . - 0 MSMEG_4148 MSMEG_4148 lipase identified by match to protein family HMM PF07859 A0QZU0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4229192 4230127 . + 0 MSMEG_4149 MSMEG_4149 acetaldehyde dehydrogenase identified by match to protein family HMM PF01118 A0QZU1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4230124 4231164 . + 0 MSMEG_4150 MSMEG_4150 4-hydroxy-2-oxovalerate aldolase identified by match to protein family HMM PF00682; match to protein family HMM PF07836 A0QZU2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4231173 4231424 . - 0 MSMEG_4151 MSMEG_4151 conserved domain protein A0QZU3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4258399 4258680 . - 0 MSMEG_4181 MSMEG_4181 phosphoribosyl-ATP pyrophosphohydrolase identified by match to protein family HMM PF01503 A0QZX2 No unknown Rv2122c Rv2122c NC_008596.1 Mycobrowser_v3 CDS 4231421 4232374 . - 0 MSMEG_4152 MSMEG_4152 phenoxybenzoate dioxygenase beta subunit identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0QZU4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4232377 4232835 . - 0 MSMEG_4153 MSMEG_4153 cytochrome P450 A0QZU5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4232893 4234068 . + 0 MSMEG_4154 MSMEG_4154 transposase, Mutator family protein identified by match to protein family HMM PF00872 A0QZU6 No unknown Rv3431c Rv3431c NC_008596.1 Mycobrowser_v3 CDS 4356255 4356611 . - 0 MSMEG_4272 MSMEG_4272 HesB/YadR/YfhF family protein identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049 A0R061 No unknown Rv2204c Rv2204c NC_008596.1 Mycobrowser_v3 CDS 4234097 4235137 . + 0 MSMEG_4155 MSMEG_4155 transposase A identified by match to protein family HMM PF00589; match to protein family HMM PF02899 A0QZU7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4235134 4237359 . + 0 MSMEG_4156 MSMEG_4156 putative transposase identified by match to protein family HMM PF00589 A0QZU8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4237349 4237777 . + 0 MSMEG_4157 MSMEG_4157 putative transposase A0QZU9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4237954 4238103 . + 0 MSMEG_4158 MSMEG_4158 putative transposase A0QZV0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4238141 4239460 . - 0 MSMEG_4159 MSMEG_4159 IS6120, transposase identified by similarity to SP:P35883; match to protein family HMM PF00872 A0QT66 No unknown NC_008596.1 Mycobrowser_v3 CDS 4239712 4240125 . + 0 MSMEG_4161 MSMEG_4161 hypothetical protein identified by Glimmer2; putative A0QZV3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4240426 4241589 . - 0 MSMEG_4162 MSMEG_4162 conserved hypothetical protein identified by match to protein family HMM PF06187 A0QZV4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4241589 4242311 . - 0 MSMEG_4163 MSMEG_4163 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QZV5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4242311 4243027 . - 0 MSMEG_4164 MSMEG_4164 3-hydroxybutyryl-CoA dehydratase identified by match to protein family HMM PF00378 A0QZV6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4243036 4244478 . - 0 MSMEG_4165 MSMEG_4165 [NAD+] benzaldehyde dehydrogenase identified by match to protein family HMM PF00171 A0QZV7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4271851 4272438 . - 0 MSMEG_4192 MSMEG_4192 conserved hypothetical protein A0QZY3 No unknown Rv2134c Rv2134c NC_008596.1 Mycobrowser_v3 CDS 4244495 4245649 . - 0 MSMEG_4166 MSMEG_4166 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0QZV8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4245646 4246779 . - 0 MSMEG_4167 MSMEG_4167 alcohol dehydrogenase B identified by match to protein family HMM PF00107 A0QZV9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4246781 4248370 . - 0 MSMEG_4168 MSMEG_4168 propionate CoA-transferase identified by match to protein family HMM PF01144 A0QZW0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4356838 4357524 . + 0 MSMEG_4273 MSMEG_4273 integral membrane protein A0R062 No unknown Rv2206 Rv2206 NC_008596.1 Mycobrowser_v3 CDS 4248367 4249077 . - 0 MSMEG_4169 MSMEG_4169 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0QZW1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4249070 4250605 . - 0 MSMEG_4170 MSMEG_4170 ribose transport ATP-binding protein RbsA identified by match to protein family HMM PF00005 A0QZW2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4250602 4251639 . - 0 MSMEG_4171 MSMEG_4171 ribose transport system permease protein RbsC identified by match to protein family HMM PF02653 A0QZW3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4251653 4252771 . - 0 MSMEG_4172 MSMEG_4172 D-ribose-binding periplasmic protein RbsB identified by match to protein family HMM PF00532 A0QZW4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4252768 4253202 . - 0 MSMEG_4173 MSMEG_4173 MaoC family protein identified by match to protein family HMM PF01575 A0QZW5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4253199 4253996 . - 0 MSMEG_4174 MSMEG_4174 transcriptional regulator, IclR family protein identified by match to protein family HMM PF01614 A0QZW6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4254189 4254506 . + 0 MSMEG_4175 MSMEG_4175 transcriptional regulator, ArsR family protein identified by match to protein family HMM PF01022 A0QZW7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4254503 4255015 . + 0 MSMEG_4176 MSMEG_4176 conserved hypothetical protein A0QZW8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4255057 4255647 . + 0 MSMEG_4178 MSMEG_4178 flavodoxin/nitric oxide synthase A0QZW9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4256984 4257466 . - 0 MSMEG_4179 MSMEG_4179 probable conserved integral membrane protein A0QZX0 No unknown Rv2120c Rv2120c NC_008596.1 Mycobrowser_v3 CDS 4257530 4258396 . - 0 MSMEG_4180 hisG ATP phosphoribosyltransferase identified by match to protein family HMM PF01634; match to protein family HMM PF08029; match to protein family HMM TIGR00070 A0QZX1 No unknown Rv2121c Rv2121c NC_008596.1 Mycobrowser_v3 CDS 4258730 4260226 . - 0 MSMEG_4182 MSMEG_4182 arabinose-proton symporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879 A0QZX3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4260273 4260950 . - 0 MSMEG_4183 MSMEG_4183 phosphoglycolate phosphatase, chromosomal identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549 A0QZX4,A4ZHT2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4261027 4261209 . + 0 MSMEG_4184 MSMEG_4184 dtdp-glucose-46-dehydratase A0QZX5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4277491 4278825 . - 0 MSMEG_4200 MSMEG_4200 peptidase M20 identified by match to protein family HMM PF01546; match to protein family HMM PF07687 A0QZZ1 No unknown Rv2141c Rv2141c NC_008596.1 Mycobrowser_v3 CDS 4261269 4265009 . - 0 MSMEG_4185 metH methionine synthase identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607; match to protein family HMM PF02965; match to protein family HMM TIGR02082 A0QZX6 No unknown Rv2124c Rv2124c NC_008596.1 Mycobrowser_v3 CDS 5843430 5843888 . - 0 MSMEG_5770 MSMEG_5770 hypothetical protein identified by Glimmer2; putative A0R4B1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4265484 4266362 . + 0 MSMEG_4186 MSMEG_4186 conserved hypothetical protein identified by match to protein family HMM PF01908 A0QZX7 No unknown Rv2125 Rv2125 NC_008596.1 Mycobrowser_v3 CDS 4266384 4267841 . - 0 MSMEG_4187 MSMEG_4187 conserved hypothetical protein identified by match to protein family HMM PF06742; match to protein family HMM PF06863 A0QZX8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4267841 4268728 . - 0 MSMEG_4188 MSMEG_4188 short chain dehydrogenase identified by match to protein family HMM PF00106 A0QZX9 No unknown Rv2129c Rv2129c NC_008596.1 Mycobrowser_v3 CDS 4268754 4269992 . - 0 MSMEG_4189 cysS cysteinyl-tRNA synthetase identified by match to protein family HMM PF01406 A0QZY0 No unknown Rv2130c Rv2130c NC_008596.1 Mycobrowser_v3 CDS 4270116 4270877 . - 0 MSMEG_4190 MSMEG_4190 inositol monophosphatase family protein identified by match to protein family HMM PF00459 A0QZY1 No unknown Rv2131c Rv2131c NC_008596.1 Mycobrowser_v3 CDS 4271019 4271867 . - 0 MSMEG_4191 MSMEG_4191 conserved hypothetical protein A0QZY2 No unknown Rv2133c Rv2133c NC_008596.1 Mycobrowser_v3 CDS 4272474 4273145 . - 0 MSMEG_4193 MSMEG_4193 phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 A0QZY4 No unknown Rv2135c Rv2135c NC_008596.1 Mycobrowser_v3 CDS 4273156 4273986 . - 0 MSMEG_4194 MSMEG_4194 undecaprenol kinase, putative identified by match to protein family HMM PF02673; match to protein family HMM TIGR00753 A0QZY5 No unknown Rv2136c Rv2136c NC_008596.1 Mycobrowser_v3 CDS 4274087 4274392 . - 0 MSMEG_4195 MSMEG_4195 conserved hypothetical protein A0QZY6 No unknown Rv2137c Rv2137c NC_008596.1 Mycobrowser_v3 CDS 4274534 4275574 . + 0 MSMEG_4196 MSMEG_4196 LppL protein A0QZY7 No unknown Rv2138 Rv2138 NC_008596.1 Mycobrowser_v3 CDS 4275571 4275840 . + 0 MSMEG_4197 MSMEG_4197 conserved hypothetical protein A0QZY8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4275837 4276901 . + 0 MSMEG_4198 pyrD dihydroorotate oxidase identified by match to protein family HMM PF01180; match to protein family HMM TIGR01036 A0QZY9 No unknown Rv2139 Rv2139 NC_008596.1 Mycobrowser_v3 CDS 4279122 4280453 . - 0 MSMEG_4202 MSMEG_4202 conserved hypothetical protein A0QZZ2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4280469 4282310 . - 0 MSMEG_4203 MSMEG_4203 peptidase S8 and S53, subtilisin, kexin, sedolisin identified by match to protein family HMM PF00082 A0QZZ3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4282640 4283755 . + 0 MSMEG_4204 MSMEG_4204 catalase A0QZZ4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4283833 4286454 . + 0 MSMEG_4205 MSMEG_4205 putative transcriptional regulator identified by match to protein family HMM PF00196; match to protein family HMM PF07721 A0QZZ5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4290634 4291026 . - 0 MSMEG_4207 MSMEG_4207 universal stress protein family protein identified by match to protein family HMM PF00582 A0QZZ6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4291023 4292567 . - 0 MSMEG_4208 MSMEG_4208 integral membrane protein identified by match to protein family HMM PF01970 A0QZZ7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4292564 4293100 . - 0 MSMEG_4209 MSMEG_4209 integral membrane protein A0QZZ8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4293097 4294080 . - 0 MSMEG_4210 MSMEG_4210 secreted protein identified by match to protein family HMM PF03401 A0QZZ9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4294185 4295864 . + 0 MSMEG_4211 MSMEG_4211 two component system histidine kinase identified by match to protein family HMM PF02518 A0R000,A4ZHT3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4295857 4296519 . + 0 MSMEG_4212 MSMEG_4212 transcriptional regulatory protein CitT identified by match to protein family HMM PF00072 A0R001 No unknown NC_008596.1 Mycobrowser_v3 CDS 4296613 4297770 . + 0 MSMEG_4213 MSMEG_4213 cytochrome P450 hydroxylase identified by match to protein family HMM PF00067 A0R002 No unknown NC_008596.1 Mycobrowser_v3 CDS 4297888 4298610 . + 0 MSMEG_4214 MSMEG_4214 glutamine amidotransferase A0R003 No unknown NC_008596.1 Mycobrowser_v3 CDS 4298656 4299333 . + 0 MSMEG_4215 MSMEG_4215 phosphoribosyltransferase identified by match to protein family HMM PF00156 A0R004 No unknown NC_008596.1 Mycobrowser_v3 CDS 4299939 4300757 . - 0 MSMEG_4217 MSMEG_4217 DivIVA protein identified by match to protein family HMM PF05103 A0R006 No unknown Rv2145c Rv2145c NC_008596.1 Mycobrowser_v3 CDS 4300998 4301288 . - 0 MSMEG_4218 MSMEG_4218 possible conserved transmembrane protein A0R007 No unknown Rv2146c Rv2146c NC_008596.1 Mycobrowser_v3 CDS 4301451 4302095 . - 0 MSMEG_4219 MSMEG_4219 conserved hypothetical protein identified by match to protein family HMM PF04472 A0R008 No unknown Rv2147c Rv2147c NC_008596.1 Mycobrowser_v3 CDS 4302079 4302954 . - 0 MSMEG_4220 MSMEG_4220 conserved hypothetical protein identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044 A0R009 No unknown Rv2148c Rv2148c NC_008596.1 Mycobrowser_v3 CDS 4302930 4303643 . - 0 MSMEG_4221 MSMEG_4221 conserved hypothetical protein identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726 A0R010 No unknown Rv2149c Rv2149c NC_008596.1 Mycobrowser_v3 CDS 4303589 4303702 . + 0 MSMEG_4223 MSMEG_4223 hypothetical protein identified by Glimmer2; putative A0R011 No unknown NC_008596.1 Mycobrowser_v3 CDS 4303689 4304846 . - 0 MSMEG_4222 ftsZ cell division protein FtsZ identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065 A0R012 No unknown Rv2150c Rv2150c NC_008596.1 Mycobrowser_v3 CDS 4304832 4304960 . + 0 MSMEG_4224 MSMEG_4224 hypothetical protein identified by Glimmer2; putative A0R013 No unknown NC_008596.1 Mycobrowser_v3 CDS 4305093 4306094 . - 0 MSMEG_4225 MSMEG_4225 putative Cell division protein FtsQ identified by match to protein family HMM PF03799 A0R014 No unknown Rv2151c Rv2151c NC_008596.1 Mycobrowser_v3 CDS 4306091 4307539 . - 0 MSMEG_4226 murC UDP-N-acetylmuramate--alanine ligase identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01082 A0R015 No unknown Rv2152c Rv2152c NC_008596.1 Mycobrowser_v3 CDS 4406378 4406815 . - 0 MSMEG_4321 MSMEG_4321 conserved hypothetical protein A0R0A8 No unknown Rv2239c Rv2239c NC_008596.1 Mycobrowser_v3 CDS 4307536 4308693 . - 0 MSMEG_4227 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase identified by similarity to SP:P17443; match to protein family HMM PF03033; match to protein family HMM PF04101; match to protein family HMM TIGR01133 A0R016 No unknown Rv2153c Rv2153c NC_008596.1 Mycobrowser_v3 CDS 4308690 4310396 . - 0 MSMEG_4228 ftsW cell division protein FtsW identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614 A0R017 No unknown Rv2154c Rv2154c NC_008596.1 Mycobrowser_v3 CDS 4310401 4311882 . - 0 MSMEG_4229 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase identified by match to protein family HMM PF02875; match to protein family HMM TIGR01087 A0R018 No unknown Rv2155c Rv2155c NC_008596.1 Mycobrowser_v3 CDS 4311875 4312954 . - 0 MSMEG_4230 mraY phospho-N-acetylmuramoyl-pentapeptide- transferase identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445 A0R019 No unknown Rv2156c Rv2156c NC_008596.1 Mycobrowser_v3 CDS 4312951 4314480 . - 0 MSMEG_4231 MSMEG_4231 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01143 A0R020 No unknown Rv2157c Rv2157c NC_008596.1 Mycobrowser_v3 CDS 4314477 4316039 . - 0 MSMEG_4232 MSMEG_4232 UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01085 A0R021 No unknown Rv2158c Rv2158c NC_008596.1 Mycobrowser_v3 CDS 4691204 4692027 . + 0 MSMEG_4603 MSMEG_4603 integral membrane protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01925 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4316086 4318032 . - 0 MSMEG_4233 MSMEG_4233 Penicillin binding protein transpeptidase domain protein identified by match to protein family HMM PF00905; match to protein family HMM PF03717 A0R022 No unknown Rv2163c Rv2163c NC_008596.1 Mycobrowser_v3 CDS 4318029 4319171 . - 0 MSMEG_4234 MSMEG_4234 conserved hypothetical protein A0R023 No unknown Rv2164c Rv2164c NC_008596.1 Mycobrowser_v3 CDS 4319171 4320151 . - 0 MSMEG_4235 mraW S-adenosyl-methyltransferase MraW identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006 A0R024 No unknown Rv2165c Rv2165c NC_008596.1 Mycobrowser_v3 CDS 4320309 4320740 . - 0 MSMEG_4236 mraZ MraZ protein identified by match to protein family HMM PF02381; match to protein family HMM TIGR00242 A0R025 No unknown Rv2166c Rv2166c NC_008596.1 Mycobrowser_v3 CDS 4321263 4321664 . - 0 MSMEG_4237 MSMEG_4237 probable conserved transmembrane protein A0R026 No unknown Rv2169c Rv2169c NC_008596.1 Mycobrowser_v3 CDS 4321921 4322538 . + 0 MSMEG_4238 MSMEG_4238 conserved hypothetical protein A0R027 No unknown Rv2170 Rv2170 NC_008596.1 Mycobrowser_v3 CDS 4322593 4323288 . + 0 MSMEG_4239 MSMEG_4239 LppM protein A0R028 No unknown Rv2171 Rv2171 NC_008596.1 Mycobrowser_v3 CDS 4323431 4324519 . + 0 MSMEG_4240 MSMEG_4240 polyprenyl synthetase identified by match to protein family HMM PF00348 A0R029 No unknown Rv2173 Rv2173 NC_008596.1 Mycobrowser_v3 CDS 4324544 4326061 . + 0 MSMEG_4241 MSMEG_4241 possible conserved integral membrane protein A0R030 No unknown Rv2174 Rv2174 NC_008596.1 Mycobrowser_v3 CDS 4326128 4326532 . - 0 MSMEG_4242 MSMEG_4242 transcriptional regulatory protein A0R031 No unknown Rv2175c Rv2175c NC_008596.1 Mycobrowser_v3 CDS 4326578 4327846 . + 0 MSMEG_4243 MSMEG_4243 serine/threonine-protein kinase PK-1 identified by match to protein family HMM PF00069; match to protein family HMM PF01163 A0R032 No unknown Rv2176 Rv2176 NC_008596.1 Mycobrowser_v3 CDS 4687710 4688420 . - 0 MSMEG_4598 lppH putative conserved lipoprotein lpph A0R129 No unknown NC_008596.1 Mycobrowser_v3 CDS 4327868 4329262 . - 0 MSMEG_4244 MSMEG_4244 3-deoxy-7-phosphoheptulonate synthase identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358 A0R033 No unknown Rv2178c Rv2178c NC_008596.1 Mycobrowser_v3 CDS 4329267 4329776 . - 0 MSMEG_4245 MSMEG_4245 conserved hypothetical protein A0R034 No unknown Rv2179c Rv2179c NC_008596.1 Mycobrowser_v3 CDS 4329722 4330684 . - 0 MSMEG_4246 MSMEG_4246 probable conserved integral membrane protein A0R035 No unknown Rv2180c Rv2180c NC_008596.1 Mycobrowser_v3 CDS 4330759 4332081 . + 0 MSMEG_4247 MSMEG_4247 probable conserved integral membrane protein A0R036 No unknown Rv2181 Rv2181 NC_008596.1 Mycobrowser_v3 CDS 4332098 4332823 . - 0 MSMEG_4248 MSMEG_4248 1-acylglycerol-3-phosphate O-acyltransferase identified by match to protein family HMM PF01553 A0R037 No unknown Rv2182c Rv2182c NC_008596.1 Mycobrowser_v3 CDS 4332930 4333337 . - 0 MSMEG_4249 MSMEG_4249 conserved hypothetical protein A0R038 No unknown Rv2183c Rv2183c NC_008596.1 Mycobrowser_v3 CDS 4333334 4334611 . - 0 MSMEG_4250 MSMEG_4250 putative membrane transport ATPase identified by match to protein family HMM PF02374 A0R039 No unknown Rv2184c Rv2184c NC_008596.1 Mycobrowser_v3 CDS 4334612 4335049 . - 0 MSMEG_4251 MSMEG_4251 cyclase/dehydrase identified by match to protein family HMM PF03364 A0R040 No unknown Rv2185c Rv2185c NC_008596.1 Mycobrowser_v3 CDS 4335143 4335532 . - 0 MSMEG_4252 MSMEG_4252 conserved hypothetical protein A0R041 No unknown Rv2186c Rv2186c NC_008596.1 Mycobrowser_v3 CDS 4335624 4337423 . + 0 MSMEG_4254 MSMEG_4254 AMP-binding enzyme identified by match to protein family HMM PF00501 A0R042 No unknown Rv2187 Rv2187 NC_008596.1 Mycobrowser_v3 CDS 4337414 4338562 . - 0 MSMEG_4253 MSMEG_4253 glycosyl transferase, group 1 family protein identified by match to protein family HMM PF00534 A0R043 No unknown Rv2188c Rv2188c NC_008596.1 Mycobrowser_v3 CDS 4338603 4339400 . - 0 MSMEG_4255 MSMEG_4255 conserved hypothetical protein A0R044 No unknown Rv2189c Rv2189c NC_008596.1 Mycobrowser_v3 CDS 4339480 4340625 . - 0 MSMEG_4256 MSMEG_4256 NLP/P60 family protein identified by match to protein family HMM PF00877 A0R045 No unknown Rv2190c Rv2190c NC_008596.1 Mycobrowser_v3 CDS 4340779 4341150 . - 0 MSMEG_4257 MSMEG_4257 conserved hypothetical protein A0R046 No unknown NC_008596.1 Mycobrowser_v3 CDS 4357558 4358091 . + 0 MSMEG_4274 cobU Cobinamide kinase / cobinamide phosphate guanyltransferase identified by match to protein family HMM PF02283 A0R063 No unknown Rv0254c Rv0254c NC_008596.1 Mycobrowser_v3 CDS 4765263 4765766 . + 0 MSMEG_4679 MSMEG_4679 hypothetical protein identified by Glimmer2; putative A0R1A2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4341162 4343180 . + 0 MSMEG_4259 MSMEG_4259 DNA polymerase III, epsilon subunit identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM TIGR00573 A0R047 No unknown Rv2191 Rv2191 NC_008596.1 Mycobrowser_v3 CDS 4343055 4344149 . - 0 MSMEG_4258 trpD anthranilate phosphoribosyltransferase identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM TIGR01245 A0R048 No unknown Rv2192c Rv2192c NC_008596.1 Mycobrowser_v3 CDS 4344911 4345717 . + 0 MSMEG_4261 MSMEG_4261 ubiquinol-cytochrome c reductase cytochrome c subunit identified by match to protein family HMM PF00034 A0R050 No unknown Rv2194 Rv2194 NC_008596.1 Mycobrowser_v3 CDS 4345696 4346922 . + 0 MSMEG_4262 MSMEG_4262 ubiquinol-cytochrome c reductase iron-sulfur subunit identified by match to protein family HMM PF00355 A0R051 No unknown Rv2195 Rv2195 NC_008596.1 Mycobrowser_v3 CDS 4346919 4348559 . + 0 MSMEG_4263 MSMEG_4263 ubiquinol-cytochrome c reductase cytochrome b subunit identified by match to protein family HMM PF00033 A0R052 No unknown Rv2196 Rv2196 NC_008596.1 Mycobrowser_v3 CDS 4349138 4349701 . - 0 MSMEG_4264 MSMEG_4264 conserved hypothetical protein A0R053 No unknown Rv2197c Rv2197c NC_008596.1 Mycobrowser_v3 CDS 4349701 4350594 . - 0 MSMEG_4265 MSMEG_4265 MmpS3 protein A0R054 No unknown Rv2198c Rv2198c NC_008596.1 Mycobrowser_v3 CDS 4350575 4350724 . + 0 MSMEG_4266 MSMEG_4266 hypothetical protein identified by Glimmer2; putative A0R055 No unknown NC_008596.1 Mycobrowser_v3 CDS 4350770 4351189 . - 0 MSMEG_4267 MSMEG_4267 probable cytochrome c oxidase polypeptide 4 A0R056 No unknown Rv2199c Rv2199c NC_008596.1 Mycobrowser_v3 CDS 4351209 4352234 . - 0 MSMEG_4268 MSMEG_4268 cytochrome c oxidase subunit 2 identified by match to protein family HMM PF00116 A0R057 No unknown Rv2200c Rv2200c NC_008596.1 Mycobrowser_v3 CDS 4352394 4354370 . + 0 MSMEG_4269 asnB asparagine synthase (glutamine-hydrolyzing) identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536 A0R058 No unknown Rv2201 Rv2201 NC_008596.1 Mycobrowser_v3 CDS 4354392 4355369 . - 0 MSMEG_4270 MSMEG_4270 adenosine kinase identified by match to protein family HMM PF00294 A0R059 No unknown Rv2202c Rv2202c NC_008596.1 Mycobrowser_v3 CDS 4355564 4356217 . + 0 MSMEG_4271 MSMEG_4271 conserved hypothetical protein A0R060 No unknown Rv2203 Rv2203 NC_008596.1 Mycobrowser_v3 CDS 4358088 4359143 . + 0 MSMEG_4275 MSMEG_4275 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase identified by match to protein family HMM PF02277 A0R064 No unknown Rv2207 Rv2207 NC_008596.1 Mycobrowser_v3 CDS 4359163 4359888 . + 0 MSMEG_4277 cobS cobalamin 5'-phosphate synthase identified by match to protein family HMM PF02654; match to protein family HMM TIGR00317 A0R065 No unknown Rv2208 Rv2208 NC_008596.1 Mycobrowser_v3 CDS 4359885 4360991 . - 0 MSMEG_4276 ilvE branched-chain amino acid aminotransferase identified by match to protein family HMM PF01063; match to protein family HMM TIGR01123 A0R066 No unknown Rv2210c Rv2210c NC_008596.1 Mycobrowser_v3 CDS 4403968 4404681 . + 0 MSMEG_4317 MSMEG_4317 conserved hypothetical protein A0R0A5 No unknown Rv2227 Rv2227 NC_008596.1 Mycobrowser_v3 CDS 4361041 4362138 . - 0 MSMEG_4278 gcvT glycine cleavage system T protein identified by similarity to SP:P27248; match to protein family HMM PF01571; match to protein family HMM TIGR00528 A0R067 No unknown Rv2211c Rv2211c NC_008596.1 Mycobrowser_v3 CDS 4362195 4363286 . + 0 MSMEG_4279 MSMEG_4279 adenylate and Guanylate cyclase catalytic domain protein identified by match to protein family HMM PF00211 A0R068 No unknown Rv2212 Rv2212 NC_008596.1 Mycobrowser_v3 CDS 4363291 4364850 . + 0 MSMEG_4281 MSMEG_4281 cytosol aminopeptidase identified by match to protein family HMM PF00883; match to protein family HMM PF02789 A0R069 No unknown Rv2213 Rv2213 NC_008596.1 Mycobrowser_v3 CDS 4364847 4366583 . - 0 MSMEG_4280 MSMEG_4280 short chain dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF00561 A0R070 No unknown Rv2214c Rv2214c NC_008596.1 Mycobrowser_v3 CDS 4366658 4367005 . - 0 MSMEG_4282 MSMEG_4282 conserved hypothetical protein A0R071 No unknown NC_008596.1 Mycobrowser_v3 CDS 4367210 4368967 . + 0 MSMEG_4283 sucB 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM TIGR02927 A0R072 No unknown Rv2215 Rv2215 NC_008596.1 Mycobrowser_v3 CDS 4369020 4369928 . + 0 MSMEG_4284 MSMEG_4284 conserved hypothetical protein identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM TIGR01777 A0R073 No unknown Rv2216 Rv2216 NC_008596.1 Mycobrowser_v3 CDS 4369946 4370632 . + 0 MSMEG_4285 lipB lipoyltransferase identified by match to protein family HMM PF03099; match to protein family HMM TIGR00214 A0R074 No unknown Rv2217 Rv2217 NC_008596.1 Mycobrowser_v3 CDS 4370637 4371581 . + 0 MSMEG_4286 lipA lipoic acid synthetase identified by match to protein family HMM PF04055; match to protein family HMM TIGR00510 A0R075 No unknown Rv2218 Rv2218 NC_008596.1 Mycobrowser_v3 CDS 4371586 4372338 . + 0 MSMEG_4287 MSMEG_4287 integral membrane protein A0R076 No unknown Rv2219 Rv2219 NC_008596.1 Mycobrowser_v3 CDS 4372372 4374180 . + 0 MSMEG_4289 MSMEG_4289 amidohydrolase identified by match to protein family HMM PF01979; match to protein family HMM PF07969 A0R077 No unknown NC_008596.1 Mycobrowser_v3 CDS 4374158 4374631 . - 0 MSMEG_4288 MSMEG_4288 integral membrane protein identified by match to protein family HMM PF06271 A0R078 No unknown Rv2219A Rv2219A NC_008596.1 Mycobrowser_v3 CDS 4404837 4405655 . + 0 MSMEG_4318 MSMEG_4318 hypothetical protein identified by Glimmer2; putative A0R0A6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4374853 4376289 . + 0 MSMEG_4290 glnA glutamine synthetase, type I identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653 A0R079 No unknown Rv2220 Rv2220 NC_008596.1 Mycobrowser_v3 CDS 4376518 4376949 . + 0 MSMEG_4291 dtd D-tyrosyl-tRNA(Tyr) deacylase identified by match to protein family HMM PF02580; match to protein family HMM TIGR00256 A0R080 No unknown Rv1897c Rv1897c NC_008596.1 Mycobrowser_v3 CDS 4376977 4377387 . + 0 MSMEG_4292 MSMEG_4292 integral membrane protein identified by match to protein family HMM PF07681 A0R081 No unknown Rv3064c Rv3064c NC_008596.1 Mycobrowser_v3 CDS 4406957 4407487 . - 0 MSMEG_4322 MSMEG_4322 conserved hypothetical protein A0R0A9 No unknown Rv2240c Rv2240c NC_008596.1 Mycobrowser_v3 CDS 4377492 4380491 . - 0 MSMEG_4293 MSMEG_4293 glutamate-ammonia-ligase adenylyltransferase identified by match to protein family HMM PF03710 A0R082 No unknown Rv2221c Rv2221c NC_008596.1 Mycobrowser_v3 CDS 4380541 4381881 . - 0 MSMEG_4294 glnA glutamine synthetase, type I identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653 A0R083 No unknown Rv2222c Rv2222c NC_008596.1 Mycobrowser_v3 CDS 4381934 4383436 . - 0 MSMEG_4295 MSMEG_4295 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0R084 No unknown Rv2223c Rv2223c NC_008596.1 Mycobrowser_v3 CDS 4383565 4385097 . - 0 MSMEG_4296 MSMEG_4296 protease identified by match to protein family HMM PF00561 A0R085 No unknown Rv2224c Rv2224c NC_008596.1 Mycobrowser_v3 CDS 4385129 4386526 . - 0 MSMEG_4297 MSMEG_4297 acyltransferase, ws/dgat/mgat subfamily protein identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946 A0R086 No unknown NC_008596.1 Mycobrowser_v3 CDS 4386689 4387552 . + 0 MSMEG_4298 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase identified by match to protein family HMM PF02548; match to protein family HMM TIGR00222 A0R087 No unknown Rv2225 Rv2225 NC_008596.1 Mycobrowser_v3 CDS 4387638 4388423 . - 0 MSMEG_4299 MSMEG_4299 enoyl-CoA hydratase/isomerase identified by match to protein family HMM PF00378 A0R088 No unknown NC_008596.1 Mycobrowser_v3 CDS 4388435 4389112 . - 0 MSMEG_4300 MSMEG_4300 transcription regulator AmtR identified by match to protein family HMM PF00440 A0R089 No unknown NC_008596.1 Mycobrowser_v3 CDS 4389120 4390904 . - 0 MSMEG_4301 MSMEG_4301 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R090 No unknown NC_008596.1 Mycobrowser_v3 CDS 4391109 4392635 . + 0 MSMEG_4302 MSMEG_4302 adenylate cyclase, putative identified by match to protein family HMM PF01928; match to protein family HMM PF05235 A0R091 No unknown Rv2226 Rv2226 NC_008596.1 Mycobrowser_v3 CDS 4461684 4462337 . - 0 MSMEG_4375 MSMEG_4375 3-oxoacyl-[acyl carrier protein] reductase identified by match to protein family HMM PF00106 A0R0G2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4393133 4394689 . - 0 MSMEG_4303 MSMEG_4303 methyltransferase identified by match to protein family HMM PF03848; match to protein family HMM PF05724; match to protein family HMM PF07992 A0R092 No unknown NC_008596.1 Mycobrowser_v3 CDS 4394755 4395333 . + 0 MSMEG_4304 MSMEG_4304 regulatory protein identified by match to protein family HMM PF01381; match to protein family HMM PF07883 A0R093 No unknown NC_008596.1 Mycobrowser_v3 CDS 4395335 4396432 . - 0 MSMEG_4305 MSMEG_4305 phosphoglycerate mutase identified by match to protein family HMM PF00300 A0R094 No unknown Rv2228c Rv2228c NC_008596.1 Mycobrowser_v3 CDS 4396429 4397157 . - 0 MSMEG_4306 MSMEG_4306 conserved hypothetical protein identified by match to protein family HMM PF02591 A0R095 No unknown NC_008596.1 Mycobrowser_v3 CDS 4397147 4398298 . - 0 MSMEG_4307 MSMEG_4307 conserved hypothetical protein identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486 A0R096 No unknown NC_008596.1 Mycobrowser_v3 CDS 4398573 4399265 . + 0 MSMEG_4308 MSMEG_4308 5'-nucleotidase identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549 A0R097 No unknown Rv2232 Rv2232 NC_008596.1 Mycobrowser_v3 CDS 4399258 4399749 . + 0 MSMEG_4309 MSMEG_4309 Low molecular weight protein-tyrosine-phosphatase identified by match to protein family HMM PF01451 A0R098 No unknown Rv2234 Rv2234 NC_008596.1 Mycobrowser_v3 CDS 4399749 4400582 . + 0 MSMEG_4311 MSMEG_4311 conserved hypothetical protein A0R099 No unknown Rv2235 Rv2235 NC_008596.1 Mycobrowser_v3 CDS 4400536 4401492 . - 0 MSMEG_4310 cobD cobalamin biosynthesis protein CobD identified by match to protein family HMM PF03186; match to protein family HMM TIGR00380 A0R0A0 No unknown Rv2236c Rv2236c NC_008596.1 Mycobrowser_v3 CDS 4401829 4402245 . + 0 MSMEG_4313 MSMEG_4313 glyoxalase/bleomycin resistance protein/dioxygenase identified by match to protein family HMM PF00903 A0R0A1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4402310 4402825 . + 0 MSMEG_4314 MSMEG_4314 hypothetical protein identified by Glimmer2; putative A0R0A2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4488131 4488526 . - 0 MSMEG_4397 MSMEG_4397 transcriptional regulator, MerR family protein identified by match to protein family HMM PF00376 A0R0I4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4402920 4403411 . + 0 MSMEG_4315 MSMEG_4315 RNA polymerase sigma factor, sigma-70 family protein identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0R0A3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4403408 4403971 . + 0 MSMEG_4316 MSMEG_4316 methylated-DNA--protein-cysteine methyltransferase identified by match to protein family HMM PF01035; match to protein family HMM PF02870; match to protein family HMM TIGR00589 A0R0A4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4692393 4692797 . - 0 MSMEG_4605 MSMEG_4605 ankyrin; this gene contains a premature stop which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4405907 4406377 . - 0 MSMEG_4320 MSMEG_4320 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen identified by match to protein family HMM PF00578 A0R0A7 No unknown Rv2238c Rv2238c NC_008596.1 Mycobrowser_v3 CDS 4407679 4410468 . + 0 MSMEG_4323 MSMEG_4323 pyruvate dehydrogenase E1 component identified by match to protein family HMM TIGR00759 A0R0B0 No unknown Rv2241 Rv2241 NC_008596.1 Mycobrowser_v3 CDS 4410564 4411850 . + 0 MSMEG_4324 MSMEG_4324 conserved hypothetical protein A0R0B1 No unknown Rv2242 Rv2242 NC_008596.1 Mycobrowser_v3 CDS 4412068 4412940 . + 0 MSMEG_4325 MSMEG_4325 malonyl CoA-acyl carrier protein transacylase A0R0B2 No unknown Rv2243 Rv2243 NC_008596.1 Mycobrowser_v3 CDS 4413021 4413320 . + 0 MSMEG_4326 acpP acyl carrier protein identified by match to protein family HMM PF00550 A0R0B3 No unknown Rv2244 Rv2244 NC_008596.1 Mycobrowser_v3 CDS 4413317 4414567 . + 0 MSMEG_4327 MSMEG_4327 3-oxoacyl-[acyl-carrier-protein] synthase 1 identified by match to protein family HMM PF00109; match to protein family HMM PF02801 A0R0B4 No unknown Rv2245 Rv2245 NC_008596.1 Mycobrowser_v3 CDS 4414597 4415850 . + 0 MSMEG_4328 MSMEG_4328 3-oxoacyl-[acyl-carrier-protein] synthase 2 identified by match to protein family HMM PF00109; match to protein family HMM PF02801 A0R0B5 No unknown Rv2246 Rv2246 NC_008596.1 Mycobrowser_v3 CDS 4415919 4417343 . + 0 MSMEG_4329 MSMEG_4329 propionyl-CoA carboxylase beta chain identified by match to protein family HMM PF01039 A0R0B6 No unknown Rv2247 Rv2247 NC_008596.1 Mycobrowser_v3 CDS 2234027 2237583 . + 0 MSMEG_2161 MSMEG_2161 FadD9 protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4417418 4418167 . - 0 MSMEG_4330 MSMEG_4330 short chain dehydrogenase identified by match to protein family HMM PF00106 A0R0B7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4418265 4419254 . + 0 MSMEG_4331 MSMEG_4331 putative transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R0B8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4419488 4421044 . - 0 MSMEG_4332 MSMEG_4332 glycerol-3-phosphate dehydrogenase 1 identified by match to protein family HMM PF01266 A0R0B9 No unknown Rv2249c Rv2249c NC_008596.1 Mycobrowser_v3 CDS 4421041 4421625 . - 0 MSMEG_4333 MSMEG_4333 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R0C0 No unknown Rv2250c Rv2250c NC_008596.1 Mycobrowser_v3 CDS 4447509 4448855 . - 0 MSMEG_4360 MSMEG_4360 conserved hypothetical protein A0R0E8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4421676 4423253 . + 0 MSMEG_4334 MSMEG_4334 flavoprotein identified by match to protein family HMM PF01565; match to protein family HMM PF02913 A0R0C1 No unknown Rv2251 Rv2251 NC_008596.1 Mycobrowser_v3 CDS 4423250 4424152 . + 0 MSMEG_4335 MSMEG_4335 conserved hypothetical protein identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147 A0R0C2 No unknown Rv2252 Rv2252 NC_008596.1 Mycobrowser_v3 CDS 4424220 4424732 . - 0 MSMEG_4336 MSMEG_4336 conserved hypothetical protein A0R0C3 No unknown Rv2256c Rv2256c NC_008596.1 Mycobrowser_v3 CDS 4424856 4425665 . - 0 MSMEG_4337 MSMEG_4337 beta-lactamase identified by match to protein family HMM PF00144 A0R0C4 No unknown Rv2257c Rv2257c NC_008596.1 Mycobrowser_v3 CDS 4425730 4426827 . - 0 MSMEG_4338 MSMEG_4338 possible transcriptional regulatory protein A0R0C5 No unknown Rv2258c Rv2258c NC_008596.1 Mycobrowser_v3 CDS 4426949 4428589 . - 0 MSMEG_4339 MSMEG_4339 tetratricopeptide repeat family protein identified by match to protein family HMM PF00196; match to protein family HMM PF07719 A0R0C6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4428679 4429770 . + 0 MSMEG_4340 MSMEG_4340 NAD/mycothiol-dependent formaldehyde dehydrogenase identified by match to protein family HMM PF00107 A0R0C7 No unknown Rv2259 Rv2259 NC_008596.1 Mycobrowser_v3 CDS 4429796 4430428 . + 0 MSMEG_4342 MSMEG_4342 metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 A0R0C8 No unknown Rv2260 Rv2260 NC_008596.1 Mycobrowser_v3 CDS 4430412 4430561 . - 0 MSMEG_4341 MSMEG_4341 hypothetical protein identified by Glimmer2; putative A0R0C9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4430791 4432173 . + 0 MSMEG_4344 MSMEG_4344 putative monooxygenase A0R0D0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2290327 2291515 . + 0 MSMEG_2210 MSMEG_2210 CaiB/BaiF family protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4432170 4432934 . - 0 MSMEG_4343 MSMEG_4343 hypothetical protein identified by Glimmer2; putative A0R0D1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4432931 4433287 . - 0 MSMEG_4345 MSMEG_4345 conserved hypothetical protein A0R0D2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4433006 4433236 . + 0 MSMEG_4346 MSMEG_4346 conserved hypothetical protein A0R0D3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4433239 4434321 . + 0 MSMEG_4347 MSMEG_4347 conserved hypothetical protein A0R0D4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4519067 4519702 . - 0 MSMEG_4435 MSMEG_4435 dimethylmenaquinone methyltransferase A0R0M2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4434329 4435885 . - 0 MSMEG_4348 MSMEG_4348 acetolactate synthase large subunit identified by match to protein family HMM PF02775; match to protein family HMM PF02776 A0R0D5 No unknown Rv3509c Rv3509c NC_008596.1 Mycobrowser_v3 CDS 4435960 4437738 . - 0 MSMEG_4349 MSMEG_4349 conserved hypothetical proline rich protein A0R0D6 No unknown Rv2264c Rv2264c NC_008596.1 Mycobrowser_v3 CDS 4437803 4438963 . - 0 MSMEG_4350 dapB dihydrodipicolinate reductase identified by match to protein family HMM PF01113 A0R0D7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4438978 4439736 . + 0 MSMEG_4351 MSMEG_4351 putative oxidoreductase YjgI identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R0D8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4439737 4440798 . - 0 MSMEG_4352 MSMEG_4352 putative secreted protein A0R0D9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4440809 4441354 . - 0 MSMEG_4353 MSMEG_4353 conserved hypothetical protein A0R0E0 No unknown Rv3491 Rv3491 NC_008596.1 Mycobrowser_v3 CDS 4441468 4442991 . + 0 MSMEG_4354 MSMEG_4354 dipeptide-binding protein of ABC transport system identified by match to protein family HMM PF00496 A0R0E1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4442988 4443965 . + 0 MSMEG_4355 MSMEG_4355 peptide ABC transporter, permease protein identified by match to protein family HMM PF00528 A0R0E2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4443962 4444840 . + 0 MSMEG_4356 MSMEG_4356 inner membrane ABC transporter permease protein YddQ identified by match to protein family HMM PF00528 A0R0E3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4444837 4446417 . + 0 MSMEG_4357 MSMEG_4357 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0R0E4 No unknown NC_008596.1 Mycobrowser_v3 CDS 2294858 2294998 . - 0 MSMEG_2214 MSMEG_2214 alcohol dehydrogenase B; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4446420 4447160 . + 0 MSMEG_4358 MSMEG_4358 D-beta-hydroxybutyrate dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R0E5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4447171 4447407 . - 0 MSMEG_4359 MSMEG_4359 hypothetical protein identified by Glimmer2; putative A0R0E6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4447270 4447512 . + 0 MSMEG_4361 MSMEG_4361 conserved hypothetical protein A0R0E7 No unknown Rv2302 Rv2302 NC_008596.1 Mycobrowser_v3 CDS 4449005 4449823 . - 0 MSMEG_4362 MSMEG_4362 universal stress protein family protein identified by match to protein family HMM PF00582 A0R0E9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4450008 4450634 . - 0 MSMEG_4363 MSMEG_4363 conserved hypothetical protein identified by match to protein family HMM PF07366 A0R0F0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4450749 4450883 . - 0 MSMEG_4364 MSMEG_4364 hypothetical protein identified by Glimmer2; putative A0R0F1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4450873 4453014 . + 0 MSMEG_4365 MSMEG_4365 conserved hypothetical protein A0R0F2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4453016 4454593 . - 0 MSMEG_4366 MSMEG_4366 serine/threonine-protein kinase PknD identified by match to protein family HMM PF00069 A0R0F3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4454720 4455976 . - 0 MSMEG_4367 MSMEG_4367 formamidase identified by match to protein family HMM PF03069 A0R0F4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4455986 4456396 . + 0 MSMEG_4369 MSMEG_4369 hypothetical protein identified by Glimmer2; putative A0R0F5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4455998 4456285 . - 0 MSMEG_4368 MSMEG_4368 putative regulatory protein, FmdB family protein identified by match to protein family HMM TIGR02605 A0R0F6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4456431 4457708 . - 0 MSMEG_4370 MSMEG_4370 regulatory protein identified by match to protein family HMM PF07905 A0R0F7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4457769 4458716 . - 0 MSMEG_4371 MSMEG_4371 vanillate O-demethylase oxidoreductase identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0R0F8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4458713 4459807 . - 0 MSMEG_4372 MSMEG_4372 capreomycidine hydroxylase identified by match to protein family HMM PF00355 A0R0F9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5258247 5258900 . + 0 MSMEG_5155 MSMEG_5155 nitroreductase identified by match to protein family HMM PF00881 A0R2L3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4459820 4460713 . - 0 MSMEG_4373 MSMEG_4373 polysaccharide deacetylase, putative identified by match to protein family HMM PF01522 A0R0G0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4460713 4461672 . - 0 MSMEG_4374 speB agmatinase identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230 A0R0G1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4503695 4504246 . + 0 MSMEG_4421 MSMEG_4421 conserved hypothetical protein A0R0K8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4462339 4463046 . - 0 MSMEG_4376 MSMEG_4376 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R0G3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4463043 4464521 . - 0 MSMEG_4377 MSMEG_4377 amino acid permease family protein, putative identified by match to protein family HMM PF00324 A0R0G4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4464829 4465473 . + 0 MSMEG_4378 MSMEG_4378 two-component system response regulator identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0R0G5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4465578 4466222 . + 0 MSMEG_4379 MSMEG_4379 isochorismatase hydrolase identified by match to protein family HMM PF00857 A0R0G6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4466375 4468300 . + 0 MSMEG_4380 MSMEG_4380 ABC transporter, permease/ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF06472 A0R0G7 No unknown Rv1819c Rv1819c NC_008596.1 Mycobrowser_v3 CDS 4468358 4469371 . + 0 MSMEG_4381 MSMEG_4381 amidase identified by match to protein family HMM PF03069 A0R0G8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4469384 4470145 . + 0 MSMEG_4382 MSMEG_4382 dehydrogenase/reductase SDR family protein member 10 identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R0G9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4470276 4473152 . + 0 MSMEG_4383 MSMEG_4383 MmpL5 protein identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833 A0R0H0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4488622 4489575 . + 0 MSMEG_4398 MSMEG_4398 conserved hypothetical protein identified by match to protein family HMM PF00296 A0R0I5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4489599 4489976 . + 0 MSMEG_4399 MSMEG_4399 conserved hypothetical protein A0R0I6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3902068 3903270 . - 0 MSMEG_3831 MSMEG_3831 dephospho-CoA kinase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4473309 4475720 . + 0 MSMEG_4384 MSMEG_4384 Penicillin binding protein transpeptidase domain protein identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793 A0R0H1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4475954 4477612 . + 0 MSMEG_4385 MSMEG_4385 ABC transporter oligopeptide binding protein identified by match to protein family HMM PF00496 A0R0H2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4477609 4478577 . + 0 MSMEG_4386 MSMEG_4386 ABC transporter permease protein identified by match to protein family HMM PF00528 A0R0H3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4478574 4479428 . + 0 MSMEG_4387 MSMEG_4387 ABC transporter permease protein identified by match to protein family HMM PF00528 A0R0H4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4479425 4481053 . + 0 MSMEG_4388 MSMEG_4388 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0R0H5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4481050 4482420 . + 0 MSMEG_4389 MSMEG_4389 monooxygenase, NtaA/SnaA/SoxA family protein A0R0H6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4482417 4483634 . + 0 MSMEG_4391 MSMEG_4391 acyl-CoA dehydrogenase-family protein identified by match to protein family HMM PF08028 A0R0H7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4483625 4484047 . - 0 MSMEG_4390 MSMEG_4390 hypothetical protein identified by Glimmer2; putative A0R0H8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4483869 4485146 . + 0 MSMEG_4392 MSMEG_4392 organophopsphate acid anhydrase identified by match to protein family HMM PF01979 A0R0H9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4485158 4486039 . + 0 MSMEG_4393 MSMEG_4393 carboxyvinyl-carboxyphosphonate phosphorylmutase A0R0I0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4486041 4486934 . - 0 MSMEG_4394 MSMEG_4394 LysR family protein transcriptional regulatory protein identified by match to protein family HMM PF00126 A0R0I1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4487077 4487268 . + 0 MSMEG_4395 MSMEG_4395 excalibur domain family protein identified by match to protein family HMM PF05901 A0R0I2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4487275 4488018 . - 0 MSMEG_4396 MSMEG_4396 isochorismatase hydrolase identified by match to protein family HMM PF00857 A0R0I3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4489984 4491054 . - 0 MSMEG_4400 MSMEG_4400 alcohol dehydrogenase, zinc-containing identified by match to protein family HMM PF00107 A0R0I7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4491063 4491788 . - 0 MSMEG_4401 MSMEG_4401 phosphonoacetaldehyde hydrolase identified by match to protein family HMM PF00702 A0R0I8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4492467 4493168 . + 0 MSMEG_4402 MSMEG_4402 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4493176 4494498 . - 0 MSMEG_4403 MSMEG_4403 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4494217 4494771 . + 0 MSMEG_4404 MSMEG_4404 hypothetical protein identified by Glimmer2; putative A0R0J1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4495047 4495622 . - 0 MSMEG_4405 MSMEG_4405 putative ECF sigma factor RpoE1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0R0J2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4496063 4496482 . - 0 MSMEG_4407 MSMEG_4407 conserved hypothetical protein A0R0J4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4496500 4497018 . - 0 MSMEG_4408 MSMEG_4408 integral membrane protein identified by match to protein family HMM PF04224 A0R0J5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4497153 4497278 . + 0 MSMEG_4409 MSMEG_4409 hypothetical protein identified by Glimmer2; putative A0R0J6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4497433 4497702 . - 0 MSMEG_4410 MSMEG_4410 hypothetical protein identified by Glimmer2; putative A0R0J7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4497720 4498460 . - 0 MSMEG_4411 MSMEG_4411 oxidoreductase FAD-binding region identified by match to protein family HMM PF00175; match to protein family HMM PF00970 A0R0J8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4498464 4499063 . - 0 MSMEG_4412 MSMEG_4412 oxidoreductase, molybdopterin binding identified by match to protein family HMM PF00174 A0R0J9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4499073 4499372 . - 0 MSMEG_4413 MSMEG_4413 hypothetical protein identified by Glimmer2; putative A0R0K0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4499356 4499895 . - 0 MSMEG_4414 MSMEG_4414 conserved hypothetical protein A0R0K1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4499892 4501004 . - 0 MSMEG_4415 tal transaldolase identified by match to protein family HMM PF00923; match to protein family HMM TIGR00876 A0R0K2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4501001 4501126 . - 0 MSMEG_4416 MSMEG_4416 hypothetical protein identified by Glimmer2; putative A0R0K3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4501152 4501721 . - 0 MSMEG_4417 msrA methionine-S-sulfoxide reductase identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401 A0R0K4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4501718 4502212 . - 0 MSMEG_4418 msrB methionine-R-sulfoxide reductase identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357 A0R0K5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3961466 3962462 . - 0 MSMEG_3889 MSMEG_3889 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4502235 4503035 . - 0 MSMEG_4419 MSMEG_4419 glucose-1-dehydrogenase identified by match to protein family HMM PF00106 A0R0K6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4503248 4503682 . + 0 MSMEG_4420 MSMEG_4420 cupin 2, conserved barrel identified by match to protein family HMM PF07883 A0R0K7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4504237 4505727 . + 0 MSMEG_4422 MSMEG_4422 oxidoreductase identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF07992 A0R0K9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4505724 4506692 . + 0 MSMEG_4423 MSMEG_4423 oxidoreductase A0R0L0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4506742 4507137 . + 0 MSMEG_4424 MSMEG_4424 endoribonuclease L-PSP identified by match to protein family HMM PF01042 A0R0L1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4507134 4507535 . + 0 MSMEG_4425 MSMEG_4425 putative oxidoreductase A0R0L2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4507529 4508977 . + 0 MSMEG_4427 MSMEG_4427 transmembrane efflux pump identified by match to protein family HMM PF07690 A0R0L3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4508963 4509754 . - 0 MSMEG_4426 MSMEG_4426 secreted protein identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368 A0R0L4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4509784 4510221 . - 0 MSMEG_4428 MSMEG_4428 conserved hypothetical protein A0R0L5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4510350 4510757 . - 0 MSMEG_4429 MSMEG_4429 hypothetical protein identified by Glimmer2; putative A0R0L6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4510896 4513175 . - 0 MSMEG_4430 MSMEG_4430 transcriptional regulator identified by match to protein family HMM PF00196; match to protein family HMM PF07719; match to protein family HMM PF07721 A0R0L7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4513754 4516585 . - 0 MSMEG_4431 MSMEG_4431 putative regulatory protein identified by match to protein family HMM PF00196 A0R0L8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4516598 4516756 . - 0 MSMEG_4432 MSMEG_4432 hypothetical protein identified by Glimmer2; putative A0R0L9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4530136 4531071 . + 0 MSMEG_4450 MSMEG_4450 alpha/beta hydrolase A0R0N6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4516806 4518224 . + 0 MSMEG_4433 MSMEG_4433 dehydrogenase identified by match to protein family HMM PF00070; match to protein family HMM PF07992 A0R0M0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4533018 4533377 . + 0 MSMEG_4453 MSMEG_4453 conserved hypothetical protein A0R0N8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4518221 4519033 . + 0 MSMEG_4434 MSMEG_4434 Cof protein identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484 A0R0M1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4519702 4521636 . - 0 MSMEG_4436 MSMEG_4436 transketolase identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780 A0R0M3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4521629 4523380 . - 0 MSMEG_4437 ctaD cytochrome c oxidase, subunit I identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 A0R0M4 No unknown Rv3043c Rv3043c NC_008596.1 Mycobrowser_v3 CDS 4523377 4523499 . - 0 MSMEG_4438 MSMEG_4438 hypothetical protein identified by Glimmer2; putative A0R0M5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4523543 4524148 . - 0 MSMEG_4439 MSMEG_4439 acetyltransferase identified by match to protein family HMM PF00583 A0R0M6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4524154 4524924 . - 0 MSMEG_4440 MSMEG_4440 glucose-1-dehydrogenase identified by match to protein family HMM PF00106 A0R0M7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4524954 4525862 . - 0 MSMEG_4441 MSMEG_4441 cupin domain protein identified by match to protein family HMM PF07883 A0R0M8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4525862 4526827 . + 0 MSMEG_4444 MSMEG_4444 hypothetical protein identified by Glimmer2; putative A0R0M9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4525892 4526812 . - 0 MSMEG_4442 MSMEG_4442 zinc-binding oxidoreductase identified by match to protein family HMM PF00107 A0R0N0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4526809 4527093 . - 0 MSMEG_4443 MSMEG_4443 hypothetical protein identified by Glimmer2; putative A0R0N1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4527220 4527378 . - 0 MSMEG_4445 MSMEG_4445 hypothetical protein identified by Glimmer2; putative A0R0N2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4528883 4529092 . + 0 MSMEG_4447 MSMEG_4447 conserved hypothetical protein A0R0N3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4529095 4529424 . + 0 MSMEG_4448 MSMEG_4448 transcriptional modulator of MazE identified by match to protein family HMM PF02452 A0R0N4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4529467 4530054 . - 0 MSMEG_4449 MSMEG_4449 putative transcriptional regulator identified by match to protein family HMM PF00440 A0R0N5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4561918 4562061 . + 0 MSMEG_4481 MSMEG_4481 hypothetical protein identified by Glimmer2; putative A0R0R5 No unknown NC_008596.1 Mycobrowser_v3 CDS 3983339 3983764 . - 0 MSMEG_3913 MSMEG_3913 short chain dehydrogenase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4531068 4532780 . + 0 MSMEG_4451 MSMEG_4451 probable monooxygenase A0R0N7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4533404 4534420 . + 0 MSMEG_4454 ltaE L-threonine aldolase, low-specificity identified by similarity to SP:O50584; match to protein family HMM PF00282; match to protein family HMM PF01212 A0R0N9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4534603 4535847 . + 0 MSMEG_4455 MSMEG_4455 beta-lactamase identified by match to protein family HMM PF00144 A0R0P0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4535851 4536666 . - 0 MSMEG_4456 MSMEG_4456 conserved hypothetical protein A0R0P1 No unknown Rv2313c Rv2313c NC_008596.1 Mycobrowser_v3 CDS 4536707 4537615 . - 0 MSMEG_4457 MSMEG_4457 regulatory protein, AsnC/Lrp identified by match to protein family HMM PF01037 A0R0P2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4537835 4539388 . + 0 MSMEG_4458 MSMEG_4458 transmembrane transport protein identified by match to protein family HMM PF02133 A0R0P3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4539385 4540344 . + 0 MSMEG_4459 speB agmatinase identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230 A0R0P4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4540344 4541966 . + 0 MSMEG_4460 MSMEG_4460 acetolactate synthase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 A0R0P5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4541971 4543458 . + 0 MSMEG_4462 MSMEG_4462 sodium:solute symporter identified by match to protein family HMM PF00474 A0R0P6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4543424 4544110 . - 0 MSMEG_4461 MSMEG_4461 conserved hypothetical integral membrane protein identified by match to protein family HMM TIGR02206 A0R0P7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4544142 4545503 . - 0 MSMEG_4463 MSMEG_4463 CalR5 protein A0R0P8 No unknown Rv2314c Rv2314c NC_008596.1 Mycobrowser_v3 CDS 4545500 4547017 . - 0 MSMEG_4464 MSMEG_4464 modulator of DNA gyrase identified by match to protein family HMM PF01523 A0R0P9 No unknown Rv2315c Rv2315c NC_008596.1 Mycobrowser_v3 CDS 4547090 4547860 . - 0 MSMEG_4465 MSMEG_4465 cutinase identified by match to protein family HMM PF01083; match to protein family HMM PF02230 A0R0Q0 No unknown Rv1758 Rv1758 NC_008596.1 Mycobrowser_v3 CDS 4548039 4548956 . + 0 MSMEG_4466 MSMEG_4466 ABC transporter, permease protein UspA identified by match to protein family HMM PF00528 A0R0Q1 No unknown Rv2316 Rv2316 NC_008596.1 Mycobrowser_v3 CDS 4548976 4549770 . + 0 MSMEG_4467 MSMEG_4467 ABC transporter, permease protein UspE identified by match to protein family HMM PF00528 A0R0Q2 No unknown Rv2317 Rv2317 NC_008596.1 Mycobrowser_v3 CDS 5843975 5844388 . - 0 MSMEG_5771 MSMEG_5771 hypothetical protein identified by Glimmer2; putative A0R4B2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4549859 4551151 . + 0 MSMEG_4468 MSMEG_4468 Bacterial extracellular solute-binding protein UspC identified by match to protein family HMM PF01547 A0R0Q3 No unknown Rv2318 Rv2318 NC_008596.1 Mycobrowser_v3 CDS 4551156 4552001 . - 0 MSMEG_4469 MSMEG_4469 cobalt transport protein identified by match to protein family HMM PF02361 A0R0Q4 No unknown Rv2325c Rv2325c NC_008596.1 Mycobrowser_v3 CDS 4551998 4554037 . - 0 MSMEG_4470 MSMEG_4470 ABC transporter identified by match to protein family HMM PF00005 A0R0Q5 No unknown Rv2326c Rv2326c NC_008596.1 Mycobrowser_v3 CDS 4554168 4554617 . + 0 MSMEG_4471 MSMEG_4471 MarR-family protein transcriptional regulator identified by match to protein family HMM PF01047 A0R0Q6 No unknown Rv2327 Rv2327 NC_008596.1 Mycobrowser_v3 CDS 4554636 4555844 . + 0 MSMEG_4472 MSMEG_4472 multidrug-efflux transporter protein identified by match to protein family HMM PF07690 A0R0Q7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4555859 4556590 . - 0 MSMEG_4473 MSMEG_4473 Integral membrane protein identified by match to protein family HMM PF01988 A0R0Q8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4556672 4558594 . + 0 MSMEG_4474 MSMEG_4474 acyl-CoA oxidase identified by match to protein family HMM PF00441; match to protein family HMM PF01756; match to protein family HMM PF02770 A0R0Q9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4558601 4559080 . - 0 MSMEG_4475 MSMEG_4475 LppP protein A0R0R0 No unknown Rv2330c Rv2330c NC_008596.1 Mycobrowser_v3 CDS 4559240 4559560 . + 0 MSMEG_4476 MSMEG_4476 hypothetical protein identified by Glimmer2; putative A0R0R1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4559577 4561130 . - 0 MSMEG_4477 MSMEG_4477 hydrolase, alpha/beta hydrolase fold family protein identified by match to protein family HMM PF00561 A0R0R2 No unknown Rv1900c Rv1900c NC_008596.1 Mycobrowser_v3 CDS 4561426 4561695 . + 0 MSMEG_4479 MSMEG_4479 conserved hypothetical protein A0R0R3 No unknown Rv2342 Rv2342 NC_008596.1 Mycobrowser_v3 CDS 4561717 4561908 . - 0 MSMEG_4480 MSMEG_4480 conserved hypothetical protein A0R0R4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4609613 4610410 . + 0 MSMEG_4523 MSMEG_4523 binding-protein-dependent transport systems inner membrane component identified by match to protein family HMM PF00528 A0R0V6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4562121 4564031 . - 0 MSMEG_4482 MSMEG_4482 DNA primase identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM TIGR01391 O52200 No unknown Rv2343c Rv2343c NC_008596.1 Mycobrowser_v3 CDS 4564085 4565371 . - 0 MSMEG_4483 MSMEG_4483 deoxyguanosinetriphosphate triphosphohydrolase identified by match to protein family HMM PF01966; match to protein family HMM TIGR01353 O52199 No unknown Rv2344c Rv2344c NC_008596.1 Mycobrowser_v3 CDS 4565431 4567473 . + 0 MSMEG_4484 MSMEG_4484 putative conserved transmembrane protein identified by match to protein family HMM PF04536 A0R0R8 No unknown Rv2345 Rv2345 NC_008596.1 Mycobrowser_v3 CDS 4567679 4569064 . - 0 MSMEG_4485 glyS glycyl-tRNA synthetase identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00389 A0R0R9 No unknown Rv2357c Rv2357c NC_008596.1 Mycobrowser_v3 CDS 4569200 4569544 . + 0 MSMEG_4486 MSMEG_4486 transcriptional regulator, ArsR family protein identified by match to protein family HMM PF01022 A0R0S0 No unknown Rv2358 Rv2358 NC_008596.1 Mycobrowser_v3 CDS 4569541 4569951 . + 0 MSMEG_4487 MSMEG_4487 ferric uptake regulation protein identified by match to protein family HMM PF01475 A0R0S1 No unknown Rv2359 Rv2359 NC_008596.1 Mycobrowser_v3 CDS 4569965 4570369 . - 0 MSMEG_4488 MSMEG_4488 hydrolase, nudix family protein identified by match to protein family HMM PF00293 A0R0S2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4570366 4570830 . - 0 MSMEG_4489 MSMEG_4489 conserved hypothetical protein A0R0S3 No unknown Rv2360c Rv2360c NC_008596.1 Mycobrowser_v3 CDS 4570835 4571716 . - 0 MSMEG_4490 uppS undecaprenyl diphosphate synthase identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055 A0R0S4 No unknown Rv2361c Rv2361c NC_008596.1 Mycobrowser_v3 CDS 4571664 4572506 . - 0 MSMEG_4491 recO DNA repair protein RecO identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613 A0R0S5 No unknown Rv2362c Rv2362c NC_008596.1 Mycobrowser_v3 CDS 4572567 4574156 . + 0 MSMEG_4492 MSMEG_4492 amidase identified by match to protein family HMM PF01425 A0R0S6 No unknown Rv2363 Rv2363 NC_008596.1 Mycobrowser_v3 CDS 4574188 4575093 . - 0 MSMEG_4493 era GTP-binding protein Era identified by similarity to SP:P42182; match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; match to protein family HMM TIGR00650 A0R0S7 No unknown Rv2364c Rv2364c NC_008596.1 Mycobrowser_v3 CDS 4575100 4575417 . - 0 MSMEG_4494 MSMEG_4494 conserved hypothetical protein A0R0S8 No unknown Rv2365c Rv2365c NC_008596.1 Mycobrowser_v3 CDS 4839149 4839829 . - 0 MSMEG_4739 MSMEG_4739 conserved hypothetical protein A0R1G0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4575410 4576780 . - 0 MSMEG_4495 MSMEG_4495 CBS domain protein identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471 A0R0S9 No unknown Rv2366c Rv2366c NC_008596.1 Mycobrowser_v3 CDS 4576777 4577313 . - 0 MSMEG_4496 MSMEG_4496 conserved hypothetical protein identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043 A0R0T0 No unknown Rv2367c Rv2367c NC_008596.1 Mycobrowser_v3 CDS 4646256 4646960 . - 0 MSMEG_4554 MSMEG_4554 probable serine/threonine-protein kinase PknH, putative A0R0Y7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4577310 4578356 . - 0 MSMEG_4497 MSMEG_4497 PhoH family protein identified by match to protein family HMM PF00013; match to protein family HMM PF02562 A0R0T1 No unknown Rv2368c Rv2368c NC_008596.1 Mycobrowser_v3 CDS 4578360 4578452 . + 0 MSMEG_4498 MSMEG_4498 hypothetical protein identified by Glimmer2; putative A0R0T2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4578490 4578738 . + 0 MSMEG_4500 MSMEG_4500 hypothetical protein identified by Glimmer2; putative A0R0T3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4578517 4578684 . - 0 MSMEG_4499 MSMEG_4499 hypothetical protein identified by Glimmer2; putative A0R0T4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4578798 4580165 . - 0 MSMEG_4501 MSMEG_4501 sodium:dicarboxylate symporter identified by match to protein family HMM PF00375 A0R0T5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4580149 4580292 . + 0 MSMEG_4503 MSMEG_4503 hypothetical protein identified by Glimmer2; putative A0R0T6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4580289 4581029 . - 0 MSMEG_4502 MSMEG_4502 conserved hypothetical protein identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046 A0R0T7 No unknown Rv2372c Rv2372c NC_008596.1 Mycobrowser_v3 CDS 4581049 4582194 . - 0 MSMEG_4504 dnaJ chaperone protein DnaJ identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349 A0R0T8 No unknown Rv2373c Rv2373c NC_008596.1 Mycobrowser_v3 CDS 4582259 4583290 . - 0 MSMEG_4505 hrcA heat-inducible transcription repressor HrcA identified by similarity to SP:P25499; match to protein family HMM PF01628; match to protein family HMM TIGR00331 A0R0T9 No unknown Rv2374c Rv2374c NC_008596.1 Mycobrowser_v3 CDS 4583328 4583459 . - 0 MSMEG_4506 MSMEG_4506 hypothetical protein identified by Glimmer2; putative A0R0U0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4583484 4583798 . + 0 MSMEG_4507 MSMEG_4507 conserved hypothetical protein A0R0U1 No unknown Rv2375 Rv2375 NC_008596.1 Mycobrowser_v3 CDS 4583805 4584014 . - 0 MSMEG_4508 MSMEG_4508 conserved domain protein identified by match to protein family HMM PF03621 A0R0U2 No unknown Rv2377c Rv2377c NC_008596.1 Mycobrowser_v3 CDS 4583992 4585299 . - 0 MSMEG_4509 MSMEG_4509 MbtG protein A0R0U3 No unknown Rv2378c Rv2378c NC_008596.1 Mycobrowser_v3 CDS 4610407 4611492 . - 0 MSMEG_4522 MSMEG_4522 ISMsm2, transposase identified by similarity to GB:CAD18826.1 A0QNI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4611535 4612887 . - 0 MSMEG_4524 MSMEG_4524 anthranilate synthase component I identified by match to protein family HMM PF00425 A0R0V8 No unknown Rv2386c Rv2386c NC_008596.1 Mycobrowser_v3 CDS 4612935 4614107 . - 0 MSMEG_4525 MSMEG_4525 putative oxygen-independent coproporphyrinogen III oxidase identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539 A0R0V9 No unknown Rv2388c Rv2388c NC_008596.1 Mycobrowser_v3 CDS 4614343 4614474 . - 0 MSMEG_4526 MSMEG_4526 hypothetical protein identified by Glimmer2; putative A0R0W0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4646989 4647762 . - 0 MSMEG_4555 MSMEG_4555 LppR protein A0R0Y8 No unknown Rv2403c Rv2403c NC_008596.1 Mycobrowser_v3 CDS 4585320 4589759 . - 0 MSMEG_4510 MSMEG_4510 peptide synthetase mbtf identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733 A0R0U4 No unknown Rv2379c Rv2379c NC_008596.1 Mycobrowser_v3 CDS 4589756 4595215 . - 0 MSMEG_4511 MSMEG_4511 linear gramicidin synthetase subunit B identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733 A0R0U5 No unknown Rv2380c Rv2380c NC_008596.1 Mycobrowser_v3 CDS 4598198 4599499 . - 0 MSMEG_4513 MSMEG_4513 polyketide synthase identified by match to protein family HMM PF00109; match to protein family HMM PF02801 A0R0U7 No unknown Rv2382c Rv2382c NC_008596.1 Mycobrowser_v3 CDS 4599486 4600232 . - 0 MSMEG_4514 MSMEG_4514 Thioesterase domain protein identified by match to protein family HMM PF00975 A0R0U8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4600229 4603738 . - 0 MSMEG_4515 MSMEG_4515 putative non-ribosomal peptide synthetase identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01733 A0R0U9 No unknown Rv2383c Rv2383c NC_008596.1 Mycobrowser_v3 CDS 4603836 4605512 . + 0 MSMEG_4516 MSMEG_4516 2,3-dihydroxybenzoate-AMP ligase identified by match to protein family HMM PF00501 A0R0V0 No unknown Rv2384 Rv2384 NC_008596.1 Mycobrowser_v3 CDS 4605520 4606146 . - 0 MSMEG_4517 MSMEG_4517 TetR-type transcriptional regulator of sulfur metabolism identified by match to protein family HMM PF00440 A0R0V1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4606212 4606742 . + 0 MSMEG_4518 MSMEG_4518 conserved hypothetical protein A0R0V2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4606739 4607761 . + 0 MSMEG_4519 MSMEG_4519 NrtC protein A0R0V3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4607737 4608453 . + 0 MSMEG_4520 MSMEG_4520 sulfate/thiosulfate import ATP-binding protein CysA identified by match to protein family HMM PF00005 A0R0V4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4608450 4609616 . + 0 MSMEG_4521 MSMEG_4521 Tat (twin-arginine translocation) pathway signal sequence identified by match to protein family HMM TIGR01409 A0R0V5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4614429 4616138 . + 0 MSMEG_4527 MSMEG_4527 ferredoxin sulfite reductase identified by match to protein family HMM PF01077; match to protein family HMM PF03460 A0R0W1 No unknown Rv2391 Rv2391 NC_008596.1 Mycobrowser_v3 CDS 4616144 4616854 . + 0 MSMEG_4528 MSMEG_4528 phosphoadenosine phosphosulfate reductase identified by match to protein family HMM PF01507; match to protein family HMM TIGR00434; match to protein family HMM TIGR02055 A0R0W2 No unknown Rv2392 Rv2392 NC_008596.1 Mycobrowser_v3 CDS 4616851 4617564 . + 0 MSMEG_4529 MSMEG_4529 secreted protein identified by match to protein family HMM PF01903 A0R0W3 No unknown Rv2393 Rv2393 NC_008596.1 Mycobrowser_v3 CDS 4617583 4618668 . - 0 MSMEG_4530 cysA sulfate ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM TIGR00968 A0R0W4 No unknown Rv2397c Rv2397c NC_008596.1 Mycobrowser_v3 CDS 4618684 4619508 . - 0 MSMEG_4531 cysW sulfate ABC transporter, permease protein CysW identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140 A0R0W5 No unknown Rv2398c Rv2398c NC_008596.1 Mycobrowser_v3 CDS 4619505 4620362 . - 0 MSMEG_4532 cysT sulfate ABC transporter, permease protein CysT identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02139 A0R0W6 No unknown Rv2399c Rv2399c NC_008596.1 Mycobrowser_v3 CDS 4620359 4621408 . - 0 MSMEG_4533 MSMEG_4533 sulfate-binding protein identified by match to protein family HMM TIGR00971 A0R0W7 No unknown Rv2400c Rv2400c NC_008596.1 Mycobrowser_v3 CDS 4621748 4621951 . - 0 MSMEG_4534 MSMEG_4534 putative conserved membrane protein A0R0W8 No unknown Rv2401A Rv2401A NC_008596.1 Mycobrowser_v3 CDS 4637637 4638872 . - 0 MSMEG_4547 MSMEG_4547 acyl-CoA dehydrogenase family protein identified by match to protein family HMM PF08028 A0R0Y0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4622057 4624063 . + 0 MSMEG_4535 MSMEG_4535 glycoside hydrolase identified by match to protein family HMM PF00723 A0R0W9 No unknown Rv2402 Rv2402 NC_008596.1 Mycobrowser_v3 CDS 4624067 4625287 . - 0 MSMEG_4536 MSMEG_4536 conserved hypothetical protein A0R0X0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4625673 4626596 . + 0 MSMEG_4537 MSMEG_4537 major membrane protein I A0R0X1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4642947 4644329 . - 0 MSMEG_4551 MSMEG_4551 monoxygenase A0R0Y4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4626583 4628262 . + 0 MSMEG_4538 MSMEG_4538 cysteine desulphurase, SufS identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR01979 A0R0X2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4628345 4629451 . + 0 MSMEG_4539 MSMEG_4539 alkanesulfonate monooxygenase A0R0X3,A4ZHT4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4629448 4630668 . + 0 MSMEG_4540 MSMEG_4540 acetyltransferase, gnat family protein identified by match to protein family HMM PF00583 A0R0X4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4630773 4632392 . + 0 MSMEG_4541 MSMEG_4541 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0R0X5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4632389 4633327 . + 0 MSMEG_4542 MSMEG_4542 oligopeptide transport integral membrane protein identified by match to protein family HMM PF00528 A0R0X6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4633332 4634315 . + 0 MSMEG_4543 MSMEG_4543 ABC transporter system integral membrane protein identified by match to protein family HMM PF00528 A0R0X7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4634344 4636113 . + 0 MSMEG_4545 MSMEG_4545 bacterial extracellular solute-binding protein, family protein 5 identified by match to protein family HMM PF00496 A0R0X8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4636110 4636661 . - 0 MSMEG_4544 MSMEG_4544 methyltransferase small domain superfamily protein identified by match to protein family HMM PF05175; match to protein family HMM PF05724 A0R0X9 No unknown Rv3322c Rv3322c NC_008596.1 Mycobrowser_v3 CDS 4638869 4639852 . - 0 MSMEG_4548 MSMEG_4548 acetyltransferase, gnat family protein identified by match to protein family HMM PF00583 A0R0Y1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4639849 4641354 . - 0 MSMEG_4549 MSMEG_4549 amino acid permease-associated region, putative identified by match to protein family HMM PF00324 A0R0Y2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4641611 4642816 . + 0 MSMEG_4550 MSMEG_4550 transposase identified by match to protein family HMM PF01548; match to protein family HMM PF02371 A0R0Y3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4644326 4645630 . - 0 MSMEG_4552 ssuD nitrilotriacetate monooxygenase component A identified by match to protein family HMM PF00296 A0R0Y5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5872991 5873104 . - 0 MSMEG_5806 MSMEG_5806 hypothetical protein identified by Glimmer2; putative A0R4E6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4647861 4649756 . - 0 MSMEG_4556 lepA GTP-binding protein LepA identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF06421; match to protein family HMM TIGR00231; match to protein family HMM TIGR01393 A0R0Y9 No unknown Rv2404c Rv2404c NC_008596.1 Mycobrowser_v3 CDS 4649836 4650471 . + 0 MSMEG_4558 MSMEG_4558 conserved hypothetical protein A0R0Z0 No unknown Rv2405 Rv2405 NC_008596.1 Mycobrowser_v3 CDS 4650468 4651241 . - 0 MSMEG_4557 MSMEG_4557 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0R0Z1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4651238 4652257 . - 0 MSMEG_4559 MSMEG_4559 ABC transporter, membrane spanning protein identified by match to protein family HMM PF00950; match to protein family HMM PF01032 A0R0Z2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4652260 4653279 . - 0 MSMEG_4560 MSMEG_4560 periplasmic binding protein identified by match to protein family HMM PF01497 A0R0Z3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4653276 4654298 . - 0 MSMEG_4561 MSMEG_4561 ABC Fe3+-siderophores transporter, periplasmic binding protein identified by match to protein family HMM PF01497 A0R0Z4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4654776 4655399 . - 0 MSMEG_4563 MSMEG_4563 puromycin N-acetyltransferase A0R0Z5 No unknown Rv0133 Rv0133 NC_008596.1 Mycobrowser_v3 CDS 4655467 4655898 . - 0 MSMEG_4564 MSMEG_4564 CBS domain protein identified by match to protein family HMM PF00571 A0R0Z6 No unknown Rv2406c Rv2406c NC_008596.1 Mycobrowser_v3 CDS 4656041 4657063 . + 0 MSMEG_4565 MSMEG_4565 oxidoreductase identified by match to protein family HMM PF00248 A0R0Z7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4658741 4659601 . + 0 MSMEG_4568 MSMEG_4568 ribonuclease Z identified by match to protein family HMM PF00753 A0R0Z8 No unknown Rv2407 Rv2407 NC_008596.1 Mycobrowser_v3 CDS 4659585 4660424 . - 0 MSMEG_4567 MSMEG_4567 conserved hypothetical protein identified by match to protein family HMM PF01841 A0R0Z9 No unknown Rv2409c Rv2409c NC_008596.1 Mycobrowser_v3 CDS 4660425 4661402 . - 0 MSMEG_4569 MSMEG_4569 conserved hypothetical protein identified by similarity to GP:22294891; match to protein family HMM PF04168 A0R100 No unknown Rv2410c Rv2410c NC_008596.1 Mycobrowser_v3 CDS 4661412 4663040 . - 0 MSMEG_4570 MSMEG_4570 conserved hypothetical protein identified by match to protein family HMM PF04169; match to protein family HMM PF04174 A0R101 No unknown Rv2411c Rv2411c NC_008596.1 Mycobrowser_v3 CDS 4663326 4663586 . + 0 MSMEG_4571 rpsT ribosomal protein S20 identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029 A0R102 No unknown Rv2412 Rv2412 NC_008596.1 Mycobrowser_v3 CDS 4852549 4852941 . - 0 MSMEG_4756 acpS holo-(acyl-carrier-protein) synthase identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556 A0R1H6 No unknown Rv2523c Rv2523c NC_008596.1 Mycobrowser_v3 CDS 4663655 4664614 . - 0 MSMEG_4572 MSMEG_4572 DNA polymerase III, delta subunit identified by match to protein family HMM PF06144 A0R103 No unknown Rv2413c Rv2413c NC_008596.1 Mycobrowser_v3 CDS 4664622 4666136 . - 0 MSMEG_4573 MSMEG_4573 competence protein identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360 A0R104 No unknown Rv2414c Rv2414c NC_008596.1 Mycobrowser_v3 CDS 4666133 4667011 . - 0 MSMEG_4574 MSMEG_4574 DNA-binding protein identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426 A0R105 No unknown Rv2415c Rv2415c NC_008596.1 Mycobrowser_v3 CDS 4667078 4668343 . - 0 MSMEG_4575 MSMEG_4575 hypothetical protein identified by Glimmer2; putative A0R106 No unknown NC_008596.1 Mycobrowser_v3 CDS 4668449 4669255 . - 0 MSMEG_4576 MSMEG_4576 SpfH domain protein identified by match to protein family HMM PF01145 A0R107 No unknown NC_008596.1 Mycobrowser_v3 CDS 4669359 4670201 . - 0 MSMEG_4577 MSMEG_4577 DegV family protein identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762 A0R108 No unknown Rv2417c Rv2417c NC_008596.1 Mycobrowser_v3 CDS 4670203 4670961 . - 0 MSMEG_4578 MSMEG_4578 conserved hypothetical protein A0R109 No unknown Rv2418c Rv2418c NC_008596.1 Mycobrowser_v3 CDS 4670951 4671631 . - 0 MSMEG_4579 MSMEG_4579 phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 A0R110 No unknown Rv2419c Rv2419c NC_008596.1 Mycobrowser_v3 CDS 4671642 4672043 . - 0 MSMEG_4580 MSMEG_4580 conserved domain protein identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090 A0R111 No unknown Rv2420c Rv2420c NC_008596.1 Mycobrowser_v3 CDS 4672040 4672708 . - 0 MSMEG_4581 nadD nicotinate (nicotinamide) nucleotide adenylyltransferase identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482 A0R112 No unknown Rv2421c Rv2421c NC_008596.1 Mycobrowser_v3 CDS 4672767 4674224 . - 0 MSMEG_4582 MSMEG_4582 conserved hypothetical protein identified by match to protein family HMM PF05762 A0R113 No unknown Rv2425c Rv2425c NC_008596.1 Mycobrowser_v3 CDS 2364966 2365514 . - 0 MSMEG_2281 MSMEG_2281 This gene is disrupted by an IS1096 element.; conserved hypothetical protein, interruption-C; identified by similarity to GB:BAB49125.1; match to protein family HMM PF01638 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4674237 4675133 . - 0 MSMEG_4583 MSMEG_4583 ATPase associated with various cellular activities identified by match to protein family HMM PF07728 A0R114 No unknown Rv2426c Rv2426c NC_008596.1 Mycobrowser_v3 CDS 4675173 4676447 . - 0 MSMEG_4584 proA gamma-glutamyl phosphate reductase identified by match to protein family HMM PF00171; match to protein family HMM TIGR00407 A0R115 No unknown Rv2427c Rv2427c NC_008596.1 Mycobrowser_v3 CDS 4676563 4677423 . + 0 MSMEG_4585 rbsK ribokinase identified by match to protein family HMM PF00294 A0R116 No unknown Rv2436 Rv2436 NC_008596.1 Mycobrowser_v3 CDS 4677428 4678480 . - 0 MSMEG_4586 MSMEG_4586 ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein A0R117 No unknown NC_008596.1 Mycobrowser_v3 CDS 4678486 4679235 . - 0 MSMEG_4587 MSMEG_4587 putative aliphatic sulfonates transport ATP-binding protein SsuB identified by match to protein family HMM PF00005 A0R118 No unknown NC_008596.1 Mycobrowser_v3 CDS 4679222 4680112 . - 0 MSMEG_4588 MSMEG_4588 ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit identified by match to protein family HMM PF00528 A0R119 No unknown NC_008596.1 Mycobrowser_v3 CDS 4680109 4681665 . - 0 MSMEG_4589 MSMEG_4589 rhodanese domain protein/cystathionine beta-lyase A0R120 No unknown NC_008596.1 Mycobrowser_v3 CDS 4681779 4683116 . - 0 MSMEG_4590 ssuD nitrilotriacetate monooxygenase component A A0R121 No unknown NC_008596.1 Mycobrowser_v3 CDS 4683113 4683253 . - 0 MSMEG_4591 MSMEG_4591 hypothetical protein identified by Glimmer2; putative A0R122 No unknown NC_008596.1 Mycobrowser_v3 CDS 4683272 4684516 . + 0 MSMEG_4592 MSMEG_4592 acyl-CoA dehydrogenase family protein identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0R123 No unknown NC_008596.1 Mycobrowser_v3 CDS 4684539 4685030 . + 0 MSMEG_4593 MSMEG_4593 acyl-CoA dehydrogenase A0R124 No unknown NC_008596.1 Mycobrowser_v3 CDS 4685185 4685997 . + 0 MSMEG_4595 MSMEG_4595 probable serine/threonine-protein kinase PknH, putative A0R125 No unknown NC_008596.1 Mycobrowser_v3 CDS 4685629 4685778 . - 0 MSMEG_4594 MSMEG_4594 hypothetical protein identified by Glimmer2; putative A0R126 No unknown NC_008596.1 Mycobrowser_v3 CDS 4686360 4687001 . + 0 MSMEG_4596 MSMEG_4596 hypothetical protein identified by Glimmer2; putative A0R127 No unknown NC_008596.1 Mycobrowser_v3 CDS 4687021 4687713 . - 0 MSMEG_4597 lppH putative conserved lipoprotein lpph A0R128 No unknown NC_008596.1 Mycobrowser_v3 CDS 2367744 2367905 . - 0 MSMEG_2284 MSMEG_2284 This gene is disrupted by an IS1096 element.; conserved hypothetical protein, interruption-N; identified by similarity to OMNI:NTL02MT01721 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4688858 4689808 . - 0 MSMEG_4599 MSMEG_4599 hypothetical protein identified by Glimmer2; putative A0R130 No unknown NC_008596.1 Mycobrowser_v3 CDS 4690129 4690242 . + 0 MSMEG_4600 MSMEG_4600 hypothetical protein identified by Glimmer2; putative A0R131 No unknown NC_008596.1 Mycobrowser_v3 CDS 4690236 4690391 . + 0 MSMEG_4602 MSMEG_4602 hypothetical protein identified by Glimmer2; putative A0R132 No unknown NC_008596.1 Mycobrowser_v3 CDS 4690381 4691154 . - 0 MSMEG_4601 MSMEG_4601 transcriptional regulator, AraC family protein identified by match to protein family HMM PF00165 A0R133 No unknown NC_008596.1 Mycobrowser_v3 CDS 4692127 4692264 . - 0 MSMEG_4604 MSMEG_4604 hypothetical protein identified by Glimmer2; putative A0R134 No unknown NC_008596.1 Mycobrowser_v3 CDS 4692803 4693741 . - 0 MSMEG_4606 MSMEG_4606 hypothetical protein identified by Glimmer2; putative A0R135 No unknown NC_008596.1 Mycobrowser_v3 CDS 4692856 4693002 . - 0 MSMEG_4607 MSMEG_4607 hypothetical protein identified by Glimmer2; putative A0R136 No unknown NC_008596.1 Mycobrowser_v3 CDS 4693090 4693281 . - 0 MSMEG_4608 MSMEG_4608 hypothetical protein identified by Glimmer2; putative A0R137 No unknown NC_008596.1 Mycobrowser_v3 CDS 4694274 4695215 . - 0 MSMEG_4609 MSMEG_4609 transcriptional regulator LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R138 No unknown NC_008596.1 Mycobrowser_v3 CDS 4695322 4696107 . + 0 MSMEG_4610 MSMEG_4610 IgiC, putative identified by match to protein family HMM PF01177 A0R139 No unknown NC_008596.1 Mycobrowser_v3 CDS 4696122 4697426 . + 0 MSMEG_4611 MSMEG_4611 carrier protein identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158 A0R140 No unknown NC_008596.1 Mycobrowser_v3 CDS 4698006 4698167 . - 0 MSMEG_4613 MSMEG_4613 hypothetical protein identified by Glimmer2; putative A0R141 No unknown NC_008596.1 Mycobrowser_v3 CDS 4698213 4698959 . - 0 MSMEG_4614 MSMEG_4614 GAF family protein identified by match to protein family HMM PF02518 A0R142 No unknown NC_008596.1 Mycobrowser_v3 CDS 4730736 4731764 . - 0 MSMEG_4645 orB alpha oxoglutarate ferredoxin oxidoreductase, beta subunit identified by match to protein family HMM PF02775 A0R170 No unknown Rv2454c Rv2454c NC_008596.1 Mycobrowser_v3 CDS 4700974 4703016 . - 0 MSMEG_4617 nadE glutamine-dependent NAD+ synthetase identified by match to protein family HMM PF00795; match to protein family HMM PF02540 A0R143 No unknown Rv2438c Rv2438c NC_008596.1 Mycobrowser_v3 CDS 4703074 4703613 . + 0 MSMEG_4618 MSMEG_4618 isochorismatase family protein identified by match to protein family HMM PF00857 A0R144 No unknown NC_008596.1 Mycobrowser_v3 CDS 4703663 4704511 . + 0 MSMEG_4620 MSMEG_4620 NAD-dependent deacetylase 1 identified by match to protein family HMM PF02146 A0R145 No unknown NC_008596.1 Mycobrowser_v3 CDS 4704480 4705739 . - 0 MSMEG_4619 MSMEG_4619 putative cytochrome P450 126 identified by match to protein family HMM PF00067 A0R146 No unknown NC_008596.1 Mycobrowser_v3 CDS 5649967 5650446 . + 0 MSMEG_5562 rnhA RNase H identified by match to protein family HMM PF00075 A0R3Q8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4705806 4706447 . + 0 MSMEG_4622 MSMEG_4622 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R147 No unknown NC_008596.1 Mycobrowser_v3 CDS 4706444 4707556 . - 0 MSMEG_4621 proB glutamate 5-kinase identified by match to protein family HMM PF00696; match to protein family HMM PF01472; match to protein family HMM TIGR01027 A0R148 No unknown Rv2439c Rv2439c NC_008596.1 Mycobrowser_v3 CDS 4724276 4725268 . - 0 MSMEG_4637 MSMEG_4637 conserved hypothetical protein A0R162 No unknown NC_008596.1 Mycobrowser_v3 CDS 4707553 4709010 . - 0 MSMEG_4623 MSMEG_4623 GTP-binding protein Obg/CgtA identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM TIGR02729 A0R149 No unknown Rv2440c Rv2440c NC_008596.1 Mycobrowser_v3 CDS 4709102 4709368 . - 0 MSMEG_4624 rpmA ribosomal protein L27 identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062 A0R150 No unknown Rv2441c Rv2441c NC_008596.1 Mycobrowser_v3 CDS 4709385 4709696 . - 0 MSMEG_4625 rplU ribosomal protein L21 identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061 A0R151 No unknown Rv2442c Rv2442c NC_008596.1 Mycobrowser_v3 CDS 4709887 4713000 . - 0 MSMEG_4626 MSMEG_4626 ribonuclease, Rne/Rng family protein identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757 A0R152 No unknown Rv2444c Rv2444c NC_008596.1 Mycobrowser_v3 CDS 4713398 4713817 . - 0 MSMEG_4627 MSMEG_4627 nucleoside diphosphate kinase identified by match to protein family HMM PF00334 O85501 No unknown Rv2445c Rv2445c NC_008596.1 Mycobrowser_v3 CDS 4713903 4714307 . - 0 MSMEG_4628 MSMEG_4628 conserved hypothetical protein A0R154 No unknown Rv2446c Rv2446c NC_008596.1 Mycobrowser_v3 CDS 4715751 4718369 . - 0 MSMEG_4630 valS valyl-tRNA synthetase identified by match to protein family HMM PF00133; match to protein family HMM TIGR00422 A0R155 No unknown Rv2448c Rv2448c NC_008596.1 Mycobrowser_v3 CDS 4718475 4719089 . - 0 MSMEG_4631 MSMEG_4631 conserved hypothetical protein A0R156 No unknown NC_008596.1 Mycobrowser_v3 CDS 4719210 4720460 . - 0 MSMEG_4632 MSMEG_4632 saccharopine dehydrogenase identified by match to protein family HMM PF03435 A0R157 No unknown Rv2449c Rv2449c NC_008596.1 Mycobrowser_v3 CDS 4720471 4722462 . - 0 MSMEG_4633 MSMEG_4633 peptidase S9, prolyl oligopeptidase identified by match to protein family HMM PF00326; match to protein family HMM PF05448 A0R158 No unknown NC_008596.1 Mycobrowser_v3 CDS 4722488 4722637 . - 0 MSMEG_4634 MSMEG_4634 hypothetical protein identified by Glimmer2; putative A0R159 No unknown NC_008596.1 Mycobrowser_v3 CDS 4722620 4723969 . + 0 MSMEG_4635 MSMEG_4635 ammonium transporter family protein identified by match to protein family HMM PF00909 A0R160 No unknown NC_008596.1 Mycobrowser_v3 CDS 4723973 4724191 . + 0 MSMEG_4636 MSMEG_4636 hypothetical protein identified by Glimmer2; putative A0R161 No unknown NC_008596.1 Mycobrowser_v3 CDS 4852999 4862268 . - 0 MSMEG_4757 MSMEG_4757 fatty acid synthase identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801 A0R1H7 No unknown Rv2524c Rv2524c NC_008596.1 Mycobrowser_v3 CDS 4725265 4726206 . - 0 MSMEG_4638 MSMEG_4638 vanillate O-demethylase oxidoreductase identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0R163 No unknown NC_008596.1 Mycobrowser_v3 CDS 4726203 4726733 . - 0 MSMEG_4639 MSMEG_4639 conserved hypothetical protein A0R164 No unknown NC_008596.1 Mycobrowser_v3 CDS 4726899 4728047 . + 0 MSMEG_4641 MSMEG_4641 salicylate hydroxylase identified by match to protein family HMM PF01266; match to protein family HMM PF01494 A0R165 No unknown NC_008596.1 Mycobrowser_v3 CDS 4728044 4728505 . - 0 MSMEG_4640 MSMEG_4640 secreted protein identified by match to protein family HMM PF06737 A0R166 No unknown NC_008596.1 Mycobrowser_v3 CDS 4728360 4728740 . + 0 MSMEG_4642 MSMEG_4642 hypothetical protein identified by Glimmer2; putative A0R167 No unknown NC_008596.1 Mycobrowser_v3 CDS 4728762 4729085 . - 0 MSMEG_4643 MSMEG_4643 resuscitation-promoting factor identified by match to protein family HMM PF06737 A0R168 No unknown NC_008596.1 Mycobrowser_v3 CDS 4730153 4730716 . - 0 MSMEG_4644 MSMEG_4644 molybdopterin-guanine dinucleotide biosynthesis protein A A0R169 No unknown Rv2453c Rv2453c NC_008596.1 Mycobrowser_v3 CDS 4731815 4733770 . - 0 MSMEG_4646 MSMEG_4646 pyruvate synthase identified by match to protein family HMM PF01855 A0R171 No unknown Rv2455c Rv2455c NC_008596.1 Mycobrowser_v3 CDS 4734131 4734955 . - 0 MSMEG_4647 MSMEG_4647 carbohydrate kinase, PfkB, putative identified by match to protein family HMM PF00294 A0R172 No unknown NC_008596.1 Mycobrowser_v3 CDS 4735102 4736106 . - 0 MSMEG_4648 MSMEG_4648 DNA-binding protein A0R173 No unknown NC_008596.1 Mycobrowser_v3 CDS 4736191 4737387 . + 0 MSMEG_4649 MSMEG_4649 phytanoyl-CoA dioxygenase identified by match to protein family HMM PF05721 A0R174 No unknown NC_008596.1 Mycobrowser_v3 CDS 4832458 4833228 . - 0 MSMEG_4733 MSMEG_4733 putative membrane protein A0R1F4 No unknown Rv1517 Rv1517 NC_008596.1 Mycobrowser_v3 CDS 4737384 4738391 . + 0 MSMEG_4650 MSMEG_4650 putative oxidoreductase YisS identified by match to protein family HMM PF01408; match to protein family HMM PF02894 A0R175 No unknown NC_008596.1 Mycobrowser_v3 CDS 4738388 4739257 . + 0 MSMEG_4651 MSMEG_4651 AP endonuclease, family protein 2 identified by match to protein family HMM PF01261 A0R176 No unknown NC_008596.1 Mycobrowser_v3 CDS 4767137 4767955 . + 0 MSMEG_4681 MSMEG_4681 conserved hypothetical protein A0R1A4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4739254 4740246 . + 0 MSMEG_4652 MSMEG_4652 D-oliose 4-ketoreductase identified by match to protein family HMM PF01408; match to protein family HMM PF02894 A0R177 No unknown NC_008596.1 Mycobrowser_v3 CDS 4740243 4741019 . + 0 MSMEG_4653 MSMEG_4653 AP endonuclease, family protein 2 superfamily protein identified by match to protein family HMM PF01261 A0R178 No unknown NC_008596.1 Mycobrowser_v3 CDS 4741023 4742108 . - 0 MSMEG_4654 MSMEG_4654 aldo/keto reductase identified by match to protein family HMM PF00248 A0R179 No unknown NC_008596.1 Mycobrowser_v3 CDS 4742250 4743161 . + 0 MSMEG_4655 MSMEG_4655 transcriptional regulator, AraC family protein identified by match to protein family HMM PF00165; match to protein family HMM PF06719 A0R180 No unknown NC_008596.1 Mycobrowser_v3 CDS 4743236 4744054 . - 0 MSMEG_4656 MSMEG_4656 sugar ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0R181 No unknown NC_008596.1 Mycobrowser_v3 CDS 4744059 4745117 . - 0 MSMEG_4657 MSMEG_4657 ABC transporter membrane protein identified by match to protein family HMM PF02653 A0R182 No unknown NC_008596.1 Mycobrowser_v3 CDS 4745120 4746109 . - 0 MSMEG_4658 MSMEG_4658 sugar ABC transporter substrate-binding protein identified by match to protein family HMM PF00532 A0R183 No unknown NC_008596.1 Mycobrowser_v3 CDS 4746349 4747086 . - 0 MSMEG_4659 MSMEG_4659 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07702 A0R184 No unknown Rv0792c Rv0792c NC_008596.1 Mycobrowser_v3 CDS 4747283 4748260 . + 0 MSMEG_4661 MSMEG_4661 sugar kinase, ribokinase family protein identified by match to protein family HMM PF00294 A0R185 No unknown NC_008596.1 Mycobrowser_v3 CDS 4748250 4749158 . - 0 MSMEG_4660 MSMEG_4660 hypothetical protein identified by Glimmer2; putative A0R186 No unknown NC_008596.1 Mycobrowser_v3 CDS 4748253 4749137 . + 0 MSMEG_4662 MSMEG_4662 deoxyribose-phosphate aldolase superfamily protein identified by match to protein family HMM PF01791 A0R187 No unknown NC_008596.1 Mycobrowser_v3 CDS 4749139 4750014 . + 0 MSMEG_4663 MSMEG_4663 protein IolB identified by match to protein family HMM PF06845 A0R188 No unknown NC_008596.1 Mycobrowser_v3 CDS 4849104 4849265 . + 0 MSMEG_4751 MSMEG_4751 hypothetical protein identified by Glimmer2; putative A0R1H1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4750019 4751968 . + 0 MSMEG_4664 MSMEG_4664 IolD protein identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 A0R189 No unknown NC_008596.1 Mycobrowser_v3 CDS 4781935 4782342 . - 0 MSMEG_4698 MSMEG_4698 conserved hypothetical protein A0R1C1 No unknown Rv2475c Rv2475c NC_008596.1 Mycobrowser_v3 CDS 4751978 4752898 . + 0 MSMEG_4665 MSMEG_4665 IolE protein identified by match to protein family HMM PF01261 A0R190 No unknown NC_008596.1 Mycobrowser_v3 CDS 4752923 4753960 . + 0 MSMEG_4666 MSMEG_4666 myo-inositol 2-dehydrogenase identified by match to protein family HMM PF01408; match to protein family HMM PF02894 A0R191 No unknown NC_008596.1 Mycobrowser_v3 CDS 4753970 4754908 . - 0 MSMEG_4667 MSMEG_4667 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R192 No unknown NC_008596.1 Mycobrowser_v3 CDS 4755030 4757345 . + 0 MSMEG_4668 MSMEG_4668 oxidoreductase alpha (molybdopterin) subunit identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01701 A0R193 No unknown Rv2900c Rv2900c NC_008596.1 Mycobrowser_v3 CDS 4757345 4758169 . + 0 MSMEG_4669 fdhD formate dehydrogenase family protein accessory protein FdhD identified by match to protein family HMM PF02634; match to protein family HMM TIGR00129 A0R194 No unknown NC_008596.1 Mycobrowser_v3 CDS 4758307 4759647 . + 0 MSMEG_4670 MSMEG_4670 N-glycosylation identified by match to protein family HMM PF00201; match to protein family HMM TIGR01426 A0R195 No unknown NC_008596.1 Mycobrowser_v3 CDS 4759715 4760995 . - 0 MSMEG_4671 clpX ATP-dependent Clp protease, ATP-binding subunit ClpX identified by match to protein family HMM PF00004; match to protein family HMM PF06689; match to protein family HMM PF07724; match to protein family HMM TIGR00382 A0R196 No unknown Rv2457c Rv2457c NC_008596.1 Mycobrowser_v3 CDS 4761452 4762108 . - 0 MSMEG_4672 clpP Clp protease identified by match to protein family HMM PF00574 A0R197 No unknown Rv2460c Rv2460c NC_008596.1 Mycobrowser_v3 CDS 4762105 4762716 . - 0 MSMEG_4673 clpP Clp protease identified by match to protein family HMM PF00574 A0R198 No unknown Rv2461c Rv2461c NC_008596.1 Mycobrowser_v3 CDS 4762826 4764235 . - 0 MSMEG_4674 tig trigger factor identified by match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115 A0R199 No unknown Rv2462c Rv2462c NC_008596.1 Mycobrowser_v3 CDS 4764745 4765266 . + 0 MSMEG_4678 MSMEG_4678 hypothetical protein identified by Glimmer2; putative A0R1A0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4765128 4765307 . - 0 MSMEG_4677 MSMEG_4677 hypothetical protein identified by Glimmer2; putative A0R1A1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4765880 4767085 . + 0 MSMEG_4680 lipP carboxylesterase, putative identified by similarity to PIR:JC2091; match to protein family HMM PF00144 A0R1A3 No unknown Rv2463 Rv2463 NC_008596.1 Mycobrowser_v3 CDS 4862285 4862494 . + 0 MSMEG_4758 MSMEG_4758 hypothetical protein identified by Glimmer2; putative A0R1H8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4767975 4769675 . - 0 MSMEG_4682 MSMEG_4682 Na+/H+ antiporter identified by match to protein family HMM PF00999 A0R1A5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4769713 4770519 . - 0 MSMEG_4683 MSMEG_4683 putative formamidopyrimidine-DNA glycosylase identified by match to protein family HMM PF01149; match to protein family HMM PF06831 A0R1A6 No unknown Rv2464c Rv2464c NC_008596.1 Mycobrowser_v3 CDS 4770535 4771014 . - 0 MSMEG_4684 MSMEG_4684 ribose 5-phosphate isomerase identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR02133 A0R1A7 No unknown Rv2465c Rv2465c NC_008596.1 Mycobrowser_v3 CDS 4771078 4772004 . + 0 MSMEG_4686 MSMEG_4686 putative oxidoreductase YdbC identified by match to protein family HMM PF00248 A0R1A8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5413234 5413683 . + 0 MSMEG_5326 MSMEG_5326 hypothetical protein identified by Glimmer2; putative A0R333 No unknown NC_008596.1 Mycobrowser_v3 CDS 4771960 4772919 . - 0 MSMEG_4685 MSMEG_4685 oxidoreductase identified by match to protein family HMM PF03171 A0R1A9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4772916 4773356 . - 0 MSMEG_4687 MSMEG_4687 cytosine deaminase identified by match to protein family HMM PF00383 A0R1B0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4773420 4774028 . - 0 MSMEG_4688 MSMEG_4688 conserved hypothetical protein, putative identified by match to protein family HMM PF01323 A0R1B1 No unknown Rv2466c Rv2466c NC_008596.1 Mycobrowser_v3 CDS 4774279 4774683 . + 0 MSMEG_4689 MSMEG_4689 conserved hypothetical protein identified by match to protein family HMM PF05305 A0R1B2 No unknown Rv1690,Rv3354 Rv1690,Rv3354 NC_008596.1 Mycobrowser_v3 CDS 4774721 4777303 . + 0 MSMEG_4690 pepN aminopeptidase N identified by match to protein family HMM PF01433; match to protein family HMM TIGR02412 A0R1B3 No unknown Rv2467 Rv2467 NC_008596.1 Mycobrowser_v3 CDS 4777394 4777744 . + 0 MSMEG_4691 MSMEG_4691 HNH nuclease A0R1B4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4777808 4778281 . - 0 MSMEG_4692 MSMEG_4692 conserved hypothetical protein A0R1B5 No unknown Rv2468c Rv2468c NC_008596.1 Mycobrowser_v3 CDS 4778268 4778507 . - 0 MSMEG_4693 MSMEG_4693 conserved hypothetical protein A0R1B6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4778559 4779137 . - 0 MSMEG_4694 MSMEG_4694 HNH endonuclease family protein identified by match to protein family HMM PF01844 A0R1B7 No unknown Rv2469c Rv2469c NC_008596.1 Mycobrowser_v3 CDS 4779348 4779743 . + 0 MSMEG_4695 MSMEG_4695 protozoan/cyanobacterial globin family protein identified by match to protein family HMM PF01152 A0R1B8 No unknown Rv2470 Rv2470 NC_008596.1 Mycobrowser_v3 CDS 4779743 4781281 . + 0 MSMEG_4696 MSMEG_4696 alpha-amylase family protein identified by match to protein family HMM PF00128 A0R1B9 No unknown Rv2471 Rv2471 NC_008596.1 Mycobrowser_v3 CDS 4781282 4781938 . - 0 MSMEG_4697 MSMEG_4697 conserved hypothetical protein A0R1C0 No unknown Rv2474c Rv2474c NC_008596.1 Mycobrowser_v3 CDS 4782372 4787156 . - 0 MSMEG_4699 MSMEG_4699 NAD-glutamate dehydrogenase identified by match to protein family HMM PF05088 A0R1C2 No unknown Rv2476c Rv2476c NC_008596.1 Mycobrowser_v3 CDS 4838569 4839141 . + 0 MSMEG_4738 MSMEG_4738 hypothetical protein identified by Glimmer2; putative A0R1F9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4787325 4788998 . - 0 MSMEG_4700 MSMEG_4700 ABC-transporter protein, ATP binding component identified by match to protein family HMM PF00005 A0R1C3 No unknown Rv2477c Rv2477c NC_008596.1 Mycobrowser_v3 CDS 4789106 4789618 . - 0 MSMEG_4701 MSMEG_4701 single-strand binding protein identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621 A0R1C4 No unknown Rv2478c Rv2478c NC_008596.1 Mycobrowser_v3 CDS 4789876 4791876 . - 0 MSMEG_4702 MSMEG_4702 ABC-type transporter, permease components identified by match to protein family HMM PF05425 A0R1C5 No unknown Rv0102 Rv0102 NC_008596.1 Mycobrowser_v3 CDS 4791964 4794324 . - 0 MSMEG_4703 MSMEG_4703 glycerol-3-phosphate acyltransferase identified by match to protein family HMM PF01553 A0R1C6 No unknown Rv2482c Rv2482c NC_008596.1 Mycobrowser_v3 CDS 4794321 4795847 . - 0 MSMEG_4704 MSMEG_4704 acyltransferase family protein identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490 A0R1C7 No unknown Rv2483c Rv2483c NC_008596.1 Mycobrowser_v3 CDS 4795874 4797340 . - 0 MSMEG_4705 MSMEG_4705 acyltransferase, ws/dgat/mgat subfamily protein identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946 A0R1C8 No unknown Rv2484c Rv2484c NC_008596.1 Mycobrowser_v3 CDS 4797653 4798507 . - 0 MSMEG_4707 MSMEG_4707 non-heme bromoperoxidase BPO-A2 identified by match to protein family HMM PF00561 A0R1C9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4798800 4799402 . + 0 MSMEG_4708 MSMEG_4708 putative methyltransferase identified by match to protein family HMM PF05401 A0R1D0 No unknown Rv0089 Rv0089 NC_008596.1 Mycobrowser_v3 CDS 4799413 4800162 . + 0 MSMEG_4709 MSMEG_4709 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R1D1 No unknown Rv2486 Rv2486 NC_008596.1 Mycobrowser_v3 CDS 4800165 4801385 . - 0 MSMEG_4710 MSMEG_4710 dihydrolipoamide acetyltransferase identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817 A0R1D2 No unknown Rv2495c Rv2495c NC_008596.1 Mycobrowser_v3 CDS 4801382 4802458 . - 0 MSMEG_4711 MSMEG_4711 pyruvate dehydrogenase E1 component subunit beta identified by match to protein family HMM PF02779; match to protein family HMM PF02780 A0R1D3 No unknown Rv2496c Rv2496c NC_008596.1 Mycobrowser_v3 CDS 5413309 5413632 . - 0 MSMEG_5325 MSMEG_5325 hypothetical protein identified by Glimmer2; putative A0R334 No unknown NC_008596.1 Mycobrowser_v3 CDS 4802460 4803572 . - 0 MSMEG_4712 MSMEG_4712 pyruvate dehydrogenase E1 component, alpha subunit identified by match to protein family HMM PF00676 A0R1D4 No unknown Rv2497c Rv2497c NC_008596.1 Mycobrowser_v3 CDS 4803784 4804593 . - 0 MSMEG_4713 MSMEG_4713 HpcH/HpaI aldolase/citrate lyase family protein identified by match to protein family HMM PF03328 A0R1D5 No unknown Rv2498c Rv2498c NC_008596.1 Mycobrowser_v3 CDS 4804593 4805081 . - 0 MSMEG_4714 MSMEG_4714 MoaC domain protein identified by match to protein family HMM PF01575 A0R1D6 No unknown Rv2499c Rv2499c NC_008596.1 Mycobrowser_v3 CDS 4805090 4806253 . - 0 MSMEG_4715 MSMEG_4715 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0R1D7 No unknown Rv2500c Rv2500c NC_008596.1 Mycobrowser_v3 CDS 4806250 4808259 . - 0 MSMEG_4716 MSMEG_4716 acetyl-/propionyl-coenzyme A carboxylase alpha chain identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786 A0R1D8 No unknown Rv2501c Rv2501c NC_008596.1 Mycobrowser_v3 CDS 4808256 4809797 . - 0 MSMEG_4717 MSMEG_4717 Carboxyl transferase domain protein identified by match to protein family HMM PF01039 A0R1D9 No unknown Rv2502c Rv2502c NC_008596.1 Mycobrowser_v3 CDS 4809888 4810493 . + 0 MSMEG_4718 MSMEG_4718 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R1E0 No unknown Rv2506 Rv2506 NC_008596.1 Mycobrowser_v3 CDS 4849354 4849581 . - 0 MSMEG_4752 MSMEG_4752 conserved hypothetical protein A0R1H2 No unknown Rv2520c Rv2520c NC_008596.1 Mycobrowser_v3 CDS 4849686 4850159 . + 0 MSMEG_4753 MSMEG_4753 antioxidant, AhpC/TSA family protein identified by match to protein family HMM PF00578 A0R1H3 No unknown Rv2521 Rv2521 NC_008596.1 Mycobrowser_v3 CDS 4810498 4812360 . - 0 MSMEG_4719 MSMEG_4719 peptidase S9, prolyl oligopeptidase identified by match to protein family HMM PF00326; match to protein family HMM PF02129 A0R1E1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4812497 4813300 . + 0 MSMEG_4720 MSMEG_4720 conserved hypothetical protein A0R1E2 No unknown Rv2507 Rv2507 NC_008596.1 Mycobrowser_v3 CDS 4813302 4814594 . - 0 MSMEG_4721 MSMEG_4721 permease of the major facilitator superfamily protein identified by match to protein family HMM PF07690 A0R1E3 No unknown Rv2508c Rv2508c NC_008596.1 Mycobrowser_v3 CDS 4814638 4815444 . + 0 MSMEG_4722 MSMEG_4722 short-chain dehydrogenase identified by match to protein family HMM PF00106 A0R1E4 No unknown Rv2509 Rv2509 NC_008596.1 Mycobrowser_v3 CDS 4815452 4817023 . - 0 MSMEG_4723 MSMEG_4723 conserved hypothetical protein identified by similarity to GB:BAC71887.1; match to protein family HMM PF05872 A0R1E5 No unknown Rv2510c Rv2510c NC_008596.1 Mycobrowser_v3 CDS 4817123 4817773 . + 0 MSMEG_4724 MSMEG_4724 oligoribonuclease identified by match to protein family HMM PF00929 A0R1E6 No unknown Rv2511 Rv2511 NC_008596.1 Mycobrowser_v3 CDS 4818029 4818226 . + 0 MSMEG_4726 MSMEG_4726 carbamoyl-phosphate synthase small chain A0R1E7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4819204 4825539 . + 0 MSMEG_4727 MSMEG_4727 mycocerosic acid synthase identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801 A0R1E8 No unknown Rv1527c,Rv3825c Rv1527c,Rv3825c NC_008596.1 Mycobrowser_v3 CDS 4825597 4827039 . + 0 MSMEG_4728 MSMEG_4728 condensation domain protein identified by match to protein family HMM PF00668 A0R1E9 No unknown Rv3820c,Rv3824c Rv3820c,Rv3824c NC_008596.1 Mycobrowser_v3 CDS 4827036 4828424 . + 0 MSMEG_4729 MSMEG_4729 conserved hypothetical protein A0R1F0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4828501 4829868 . + 0 MSMEG_4730 MSMEG_4730 conserved hypothetical protein A0R1F1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4829885 4831618 . + 0 MSMEG_4731 MSMEG_4731 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R1F2 No unknown Rv1185c,Rv1521,Rv1529,Rv2941,Rv3826 Rv1185c,Rv1521,Rv1529,Rv2941,Rv3826 NC_008596.1 Mycobrowser_v3 CDS 4831644 4832453 . + 0 MSMEG_4732 MSMEG_4732 glycosyl transferase, group 2 family protein, putative identified by match to protein family HMM PF00535 A0R1F3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6933892 6934254 . - 0 MSMEG_6886 MSMEG_6886 transcriptional regulator identified by match to protein family HMM PF01638 A0R7E9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4833240 4835093 . - 0 MSMEG_4734 MSMEG_4734 hypothetical protein identified by Glimmer2; putative A0R1F5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4835122 4836006 . - 0 MSMEG_4735 MSMEG_4735 conserved hypothetical protein A0R1F6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4836134 4837150 . - 0 MSMEG_4736 MSMEG_4736 conserved hypothetical protein A0R1F7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4837198 4838157 . - 0 MSMEG_4737 MSMEG_4737 conserved hypothetical protein A0R1F8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4839918 4841162 . - 0 MSMEG_4740 MSMEG_4740 Glycosyltransferase family protein 28 identified by match to protein family HMM PF03033 A0R1G1 No unknown Rv1524 Rv1524 NC_008596.1 Mycobrowser_v3 CDS 4841337 4844360 . + 0 MSMEG_4741 MSMEG_4741 MmpL protein identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833 A0R1G2 No unknown Rv1522c,Rv3823c Rv1522c,Rv3823c NC_008596.1 Mycobrowser_v3 CDS 4844394 4845170 . - 0 MSMEG_4742 MSMEG_4742 clavaldehyde dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R1G3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4845342 4846067 . + 0 MSMEG_4743 MSMEG_4743 conserved hypothetical protein identified by match to protein family HMM PF05988 A0R1G4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4846064 4846534 . + 0 MSMEG_4744 MSMEG_4744 conserved hypothetical protein A0R1G5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4846538 4847740 . - 0 MSMEG_4745 MSMEG_4745 ErfK/YbiS/YcfS/YnhG family protein identified by match to protein family HMM PF03734 A0R1G6 No unknown Rv2518c Rv2518c NC_008596.1 Mycobrowser_v3 CDS 4848080 4848241 . - 0 MSMEG_4747 MSMEG_4747 hypothetical protein identified by Glimmer2; putative A0R1G7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4848238 4848381 . - 0 MSMEG_4748 MSMEG_4748 hypothetical protein identified by Glimmer2; putative A0R1G8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4848475 4848681 . - 0 MSMEG_4749 MSMEG_4749 hypothetical protein identified by Glimmer2; putative A0R1G9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4848729 4848899 . - 0 MSMEG_4750 MSMEG_4750 ornithine carbamoyltransferase A0R1H0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4850171 4851178 . - 0 MSMEG_4754 MSMEG_4754 K+-dependent Na+/Ca+ exchanger related-protein identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367 A0R1H4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4851185 4852504 . - 0 MSMEG_4755 MSMEG_4755 peptidase M20 identified by match to protein family HMM PF01546; match to protein family HMM PF07687 A0R1H5 No unknown Rv2522c Rv2522c NC_008596.1 Mycobrowser_v3 CDS 4863586 4864692 . + 0 MSMEG_4761 MSMEG_4761 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM TIGR01187 A0R1I0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4864713 4865918 . + 0 MSMEG_4762 MSMEG_4762 ABC transporter binding protein identified by match to protein family HMM PF01547 A0R1I1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5177781 5178398 . + 0 MSMEG_5079 MSMEG_5079 conserved hypothetical protein A0R2E0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4865897 4866736 . + 0 MSMEG_4763 MSMEG_4763 ABC transporter permease protein identified by match to protein family HMM PF00528 A0R1I2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4866733 4867536 . + 0 MSMEG_4764 MSMEG_4764 ABC transporter permease protein identified by match to protein family HMM PF00528 A0R1I3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4867557 4868219 . - 0 MSMEG_4765 MSMEG_4765 transcriptional regulator, MerR family protein identified by match to protein family HMM PF00376 A0R1I4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4868495 4869766 . + 0 MSMEG_4767 MSMEG_4767 major facilitator superfamily protein permease identified by match to protein family HMM PF07690 A0R1I5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4869751 4871082 . - 0 MSMEG_4766 ltrA low temperature requirement protein LtrA identified by match to protein family HMM PF06772 A0R1I6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4871158 4871703 . + 0 MSMEG_4768 MSMEG_4768 transcriptional regulator A0R1I7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4871700 4871825 . + 0 MSMEG_4769 MSMEG_4769 conserved hypothetical protein A0R1I8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4871838 4872440 . - 0 MSMEG_4770 MSMEG_4770 conserved hypothetical protein A0R1I9 No unknown Rv1362c Rv1362c NC_008596.1 Mycobrowser_v3 tRNA 4561207 4561282 . - 0 MSMEG_4478 MSMEG_4478 tRNA-Asn No unknown NC_008596.1 Mycobrowser_v3 CDS 4872437 4873348 . - 0 MSMEG_4771 MSMEG_4771 conserved hypothetical protein A0R1J0 No unknown Rv1363c Rv1363c NC_008596.1 Mycobrowser_v3 CDS 4873491 4875002 . - 0 MSMEG_4772 MSMEG_4772 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R1J1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4874999 4876189 . - 0 MSMEG_4773 MSMEG_4773 amidohydrolase family protein identified by match to protein family HMM PF04909 A0R1J2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4876225 4877802 . - 0 MSMEG_4774 MSMEG_4774 AMP-dependent synthetase and ligase identified by match to protein family HMM PF00501 A0R1J3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4877847 4878575 . + 0 MSMEG_4775 MSMEG_4775 enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 A0R1J4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4878596 4879120 . - 0 MSMEG_4776 MSMEG_4776 glyoxalase/bleomycin resistance protein/dioxygenase A0R1J5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4879224 4879655 . + 0 MSMEG_4777 MSMEG_4777 conserved hypothetical protein identified by match to protein family HMM PF01796 A0R1J6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4879668 4880813 . + 0 MSMEG_4778 MSMEG_4778 putative thiolase identified by match to protein family HMM PF02803 A0R1J7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4880896 4881501 . - 0 MSMEG_4779 MSMEG_4779 probable regulatory protein identified by match to protein family HMM PF00440 A0R1J8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4881695 4883008 . + 0 MSMEG_4780 MSMEG_4780 cytochrome p450 identified by match to protein family HMM PF00067 A0R1J9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4883097 4883573 . + 0 MSMEG_4781 MSMEG_4781 conserved hypothetical protein A0R1K0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4883577 4883996 . + 0 MSMEG_4782 MSMEG_4782 conserved hypothetical protein A0R1K1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4884016 4884396 . - 0 MSMEG_4783 MSMEG_4783 conserved hypothetical protein A0R1K2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4884580 4885089 . + 0 MSMEG_4784 MSMEG_4784 conserved hypothetical protein A0R1K3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4885100 4886830 . - 0 MSMEG_4785 MSMEG_4785 mce-family protein mce1f identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R1K4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5063477 5064157 . - 0 MSMEG_4966 MSMEG_4966 CalU12 protein identified by match to protein family HMM PF05988 A0R229 No unknown NC_008596.1 Mycobrowser_v3 CDS 4886830 4888230 . - 0 MSMEG_4786 MSMEG_4786 virulence factor mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R1K5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4888227 4889687 . - 0 MSMEG_4787 MSMEG_4787 virulence factor mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R1K6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4890232 4890726 . - 0 MSMEG_4789 MSMEG_4789 hypothetical protein identified by Glimmer2; putative A0R1K7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4890445 4891767 . + 0 MSMEG_4790 MSMEG_4790 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4891775 4892476 . - 0 MSMEG_4791 MSMEG_4791 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4892576 4893052 . - 0 MSMEG_4792 MSMEG_4792 virulence factor mce family protein identified by match to protein family HMM PF02470 A0R1L0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4893037 4894062 . - 0 MSMEG_4793 MSMEG_4793 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R1L1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4894059 4895333 . - 0 MSMEG_4794 MSMEG_4794 virulence factor identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R1L2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4895343 4896191 . - 0 MSMEG_4795 MSMEG_4795 ABC-transporter integral membrane protein identified by match to protein family HMM PF02405 A0R1L3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4896209 4896982 . - 0 MSMEG_4796 MSMEG_4796 conserved hypothetical protein identified by match to protein family HMM PF02405 A0R1L4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4896996 4897121 . - 0 MSMEG_4797 MSMEG_4797 hypothetical protein identified by Glimmer2; putative A0R1L5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4897386 4898594 . - 0 MSMEG_4798 MSMEG_4798 L-carnitine dehydratase/bile acid-inducible protein F identified by match to protein family HMM PF02515 A0R1L6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4898623 4900095 . - 0 MSMEG_4799 MSMEG_4799 aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 A0R1L7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4900364 4901065 . + 0 MSMEG_4800 MSMEG_4800 3-oxoacyl-(acyl-carrier-protein) reductase, putative identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R1L8 No unknown NC_008596.1 Mycobrowser_v3 tRNA 4764298 4764371 . - 0 MSMEG_4675 MSMEG_4675 tRNA-Pro No unknown NC_008596.1 Mycobrowser_v3 CDS 4901113 4901985 . + 0 MSMEG_4801 MSMEG_4801 carveol dehydrogenase identified by match to protein family HMM PF00106 A0R1L9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4902029 4902220 . + 0 MSMEG_4802 MSMEG_4802 conserved domain protein A0R1M0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4902298 4903659 . + 0 MSMEG_4803 MSMEG_4803 cytochrome P450 superfamily protein identified by match to protein family HMM PF00067 A0R1M1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4903779 4904126 . + 0 MSMEG_4804 MSMEG_4804 conserved hypothetical protein A0R1M2 No unknown Rv1174c Rv1174c NC_008596.1 Mycobrowser_v3 CDS 4904142 4905317 . - 0 MSMEG_4805 MSMEG_4805 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0R1M3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4697423 4697982 . + 0 MSMEG_4612 MSMEG_4612 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF04978 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4905320 4906324 . - 0 MSMEG_4806 MSMEG_4806 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0R1M4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4906661 4907713 . + 0 MSMEG_4807 MSMEG_4807 amidohydrolase family protein identified by match to protein family HMM PF04909 A0R1M5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4907782 4908876 . + 0 MSMEG_4808 MSMEG_4808 amidohydrolase family protein identified by match to protein family HMM PF04909 A0R1M6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4908876 4909268 . + 0 MSMEG_4809 MSMEG_4809 Rieske [2Fe-2S] domain, putative identified by match to protein family HMM PF00355 A0R1M7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4909265 4910176 . + 0 MSMEG_4810 MSMEG_4810 conserved hypothetical protein A0R1M8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4910179 4910643 . - 0 MSMEG_4811 MSMEG_4811 conserved hypothetical protein A0R1M9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4910683 4911978 . + 0 MSMEG_4812 MSMEG_4812 respiratory-chain NADH dehydrogenase domain, 51 kda subunit identified by match to protein family HMM PF01512 A0R1N0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4911975 4912205 . + 0 MSMEG_4813 MSMEG_4813 conserved domain protein A0R1N1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4912253 4913908 . + 0 MSMEG_4814 MSMEG_4814 conserved hypothetical protein identified by match to protein family HMM PF01796 A0R1N2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4913911 4914807 . + 0 MSMEG_4815 MSMEG_4815 conserved hypothetical protein A0R1N3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4941334 4942116 . - 0 MSMEG_4846 MSMEG_4846 probable enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R1R4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4914807 4915625 . + 0 MSMEG_4816 MSMEG_4816 6-phosphogluconate dehydrogenase, NAD-binding identified by match to protein family HMM PF03446; match to protein family HMM PF03807 A0R1N4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4915625 4916416 . + 0 MSMEG_4817 MSMEG_4817 6-phosphogluconate dehydrogenase, NAD-binding identified by match to protein family HMM PF03446; match to protein family HMM PF03807 A0R1N5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4916557 4917759 . + 0 MSMEG_4818 MSMEG_4818 putative cytochrome P450 123 identified by match to protein family HMM PF00067 A0R1N6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4917759 4917959 . + 0 MSMEG_4819 MSMEG_4819 conserved domain protein A0R1N7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4931885 4932643 . - 0 MSMEG_4835 MSMEG_4835 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106 A0R1Q3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5413873 5414196 . + 0 MSMEG_5327 MSMEG_5327 hypothetical protein identified by Glimmer2; putative A0R335 No unknown NC_008596.1 Mycobrowser_v3 CDS 4917967 4918878 . - 0 MSMEG_4820 MSMEG_4820 conserved hypothetical protein identified by match to protein family HMM PF00296 A0R1N8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4918894 4919184 . - 0 MSMEG_4821 MSMEG_4821 conserved hypothetical protein identified by match to protein family HMM PF07045 A0R1N9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4919227 4919415 . - 0 MSMEG_4822 MSMEG_4822 conserved domain protein A0R1P0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4919412 4920698 . - 0 MSMEG_4823 MSMEG_4823 cytochrome p450 identified by match to protein family HMM PF00067 A0R1P1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4920923 4921702 . + 0 MSMEG_4824 MSMEG_4824 hypothetical protein identified by Glimmer2; putative A0R1P2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4921789 4922448 . + 0 MSMEG_4825 MSMEG_4825 transcriptional repressor, TetR family protein, putative identified by match to protein family HMM PF00440 A0R1P3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4922448 4923749 . + 0 MSMEG_4826 MSMEG_4826 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0R1P4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4923746 4924777 . + 0 MSMEG_4827 MSMEG_4827 aminoglycoside phosphotransferase identified by match to protein family HMM PF01636 A0R1P5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4924779 4925753 . + 0 MSMEG_4828 MSMEG_4828 alcohol dehydrogenase, zinc-binding identified by match to protein family HMM PF00107 A0R1P6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4925880 4927070 . + 0 MSMEG_4829 MSMEG_4829 cytochrome P450 identified by match to protein family HMM PF00067 A0R1P7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4927084 4927587 . - 0 MSMEG_4830 MSMEG_4830 conserved hypothetical protein A0R1P8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4927584 4928201 . - 0 MSMEG_4831 MSMEG_4831 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R1P9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4928318 4929466 . - 0 MSMEG_4832 MSMEG_4832 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0R1Q0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4929479 4930627 . - 0 MSMEG_4833 MSMEG_4833 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0R1Q1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4956939 4957775 . - 0 MSMEG_4862 MSMEG_4862 3-alpha-hydroxysteroid dehydrogenase A0R1T0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4930620 4931879 . - 0 MSMEG_4834 MSMEG_4834 L-carnitine dehydratase/bile acid-inducible protein F identified by match to protein family HMM PF02515 A0R1Q2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4932660 4933868 . - 0 MSMEG_4836 MSMEG_4836 FadE12_1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0R1Q4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4933892 4935187 . - 0 MSMEG_4837 MSMEG_4837 amidohydrolase 2 identified by match to protein family HMM PF04909 A0R1Q5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4935302 4935427 . + 0 MSMEG_4838 MSMEG_4838 hypothetical protein identified by Glimmer2; putative A0R1Q6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4935469 4935999 . + 0 MSMEG_4839 MSMEG_4839 carboxymuconolactone decarboxylase identified by match to protein family HMM PF02627 A0R1Q7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4936035 4937378 . + 0 MSMEG_4840 MSMEG_4840 Rieske [2Fe-2S] domain protein identified by match to protein family HMM PF00355 A0R1Q8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4937371 4937718 . + 0 MSMEG_4841 MSMEG_4841 conserved hypothetical protein A0R1Q9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4937721 4938941 . + 0 MSMEG_4842 MSMEG_4842 amidohydrolase identified by match to protein family HMM PF01979; match to protein family HMM PF07969 A0R1R0 No unknown Rv0074 Rv0074 NC_008596.1 Mycobrowser_v3 CDS 4938925 4939368 . + 0 MSMEG_4843 MSMEG_4843 conserved hypothetical protein A0R1R1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4939369 4940490 . + 0 MSMEG_4844 MSMEG_4844 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0R1R2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4940496 4941302 . + 0 MSMEG_4845 MSMEG_4845 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0R1R3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5313647 5314048 . - 0 MSMEG_5218 MSMEG_5218 conserved hypothetical protein identified by match to protein family HMM PF07366 A0R2S6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4942335 4942997 . + 0 MSMEG_4847 MSMEG_4847 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R1R5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4943034 4943165 . + 0 MSMEG_4848 MSMEG_4848 hypothetical protein identified by Glimmer2; putative A0R1R6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4943348 4944193 . + 0 MSMEG_4849 MSMEG_4849 carveol dehydrogenase identified by match to protein family HMM PF00106 A0R1R7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4944203 4945003 . - 0 MSMEG_4850 MSMEG_4850 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0R1R8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4959104 4960867 . - 0 MSMEG_4864 MSMEG_4864 3-ketosteroid dehydrogenase identified by match to protein family HMM PF00890 A0R1T2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4945030 4947447 . - 0 MSMEG_4851 MSMEG_4851 caib/baif family protein identified by match to protein family HMM PF02515 A0R1R9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4947453 4948409 . - 0 MSMEG_4852 MSMEG_4852 enoyl-CoA hydratase, putative identified by match to protein family HMM PF00378 A0R1S0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4948402 4949535 . - 0 MSMEG_4853 MSMEG_4853 peptidase, M24 family protein identified by match to protein family HMM PF00557 A0R1S1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4949525 4950802 . - 0 MSMEG_4854 MSMEG_4854 peptidase, M24 family protein identified by match to protein family HMM PF00557 A0R1S2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4950799 4951971 . - 0 MSMEG_4855 MSMEG_4855 amidohydrolase family protein identified by match to protein family HMM PF04909 A0R1S3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4952011 4953243 . - 0 MSMEG_4856 MSMEG_4856 cytochrome P450 identified by match to protein family HMM PF00067 A0R1S4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4953276 4953470 . - 0 MSMEG_4857 MSMEG_4857 conserved domain protein A0R1S5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4953474 4954178 . - 0 MSMEG_4858 MSMEG_4858 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R1S6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4954289 4955095 . - 0 MSMEG_4859 MSMEG_4859 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0R1S7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4955092 4955922 . - 0 MSMEG_4860 MSMEG_4860 hydrolase, alpha/beta fold family protein, putative identified by match to protein family HMM PF00561 A0R1S8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5031204 5031776 . + 0 MSMEG_4934 MSMEG_4934 ATP:cob(I)alamin adenosyltransferase identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636 A0R1Z7 No unknown Rv1314c Rv1314c NC_008596.1 Mycobrowser_v3 CDS 4955940 4956926 . - 0 MSMEG_4861 MSMEG_4861 cyclase identified by match to protein family HMM PF04199 A0R1S9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4957779 4959089 . - 0 MSMEG_4863 MSMEG_4863 conserved hypothetical protein identified by match to protein family HMM PF00296 A0R1T1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4960864 4961784 . - 0 MSMEG_4865 MSMEG_4865 metapyrocatechase 1 identified by match to protein family HMM PF02900 A0R1T3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4961732 4963423 . - 0 MSMEG_4866 MSMEG_4866 3-(3-hydroxy-phenyl)propionate hydroxylase identified by match to protein family HMM PF01494 A0R1T4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4963428 4964336 . - 0 MSMEG_4867 MSMEG_4867 2-hydroxy-6-ketonona-2,4-dienedoic acid hydrolase identified by match to protein family HMM PF00561 A0R1T5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4964467 4965192 . + 0 MSMEG_4868 MSMEG_4868 transcriptional regulator, IclR family protein, C- domain protein identified by match to protein family HMM PF01614 A0R1T6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4965207 4966847 . + 0 MSMEG_4870 MSMEG_4870 FAD binding domain, putative identified by match to protein family HMM PF00890; match to protein family HMM PF01266 A0R1T7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4966836 4967720 . - 0 MSMEG_4869 MSMEG_4869 LAO/AO transport system ATPase identified by match to protein family HMM PF03308; match to protein family HMM TIGR00750 A0R1T8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4967796 4968560 . + 0 MSMEG_4871 MSMEG_4871 3-hydroxyacyl-CoA dehydrogenase type-2 identified by match to protein family HMM PF00106 A0R1T9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4968654 4969424 . + 0 MSMEG_4872 MSMEG_4872 short chain dehydrogenase identified by match to protein family HMM PF00106 A0R1U0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4969432 4970190 . - 0 MSMEG_4873 MSMEG_4873 enoyl-CoA hydratase/isomerase identified by match to protein family HMM PF00378 A0R1U1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5031770 5032204 . - 0 MSMEG_4933 MSMEG_4933 conserved hypothetical protein A0R1Z8 No unknown Rv1312 Rv1312 NC_008596.1 Mycobrowser_v3 CDS 4970204 4971292 . - 0 MSMEG_4874 MSMEG_4874 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771 A0R1U2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4971279 4972109 . - 0 MSMEG_4875 MSMEG_4875 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0R1U3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4998781 4999197 . - 0 MSMEG_4907 MSMEG_4907 Mov34/MPN/PAD-1 family protein identified by match to protein family HMM PF01398 A0R1X4 No unknown Rv1334 Rv1334 NC_008596.1 Mycobrowser_v3 CDS 4972087 4973466 . - 0 MSMEG_4876 MSMEG_4876 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R1U4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4973495 4973908 . + 0 MSMEG_4878 MSMEG_4878 2Fe-2S iron-sulfur cluster binding domain protein identified by match to protein family HMM PF00111 A0R1U5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4699433 4700397 . - 0 MSMEG_4615 MSMEG_4615 replicative DNA helicase; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4973893 4974972 . - 0 MSMEG_4877 MSMEG_4877 CaiB/BaiF family protein identified by match to protein family HMM PF02515 A0R1U6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4974969 4975925 . - 0 MSMEG_4879 MSMEG_4879 conserved hypothetical protein identified by match to protein family HMM PF00296 A0R1U7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4975922 4976320 . - 0 MSMEG_4880 MSMEG_4880 methylmalonyl-CoA mutase C-terminal domain protein identified by match to protein family HMM PF02310; match to protein family HMM TIGR00640 A0R1U8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4976416 4978005 . - 0 MSMEG_4881 MSMEG_4881 methylmalonyl-CoA mutase, N-terminus of large subunit identified by match to protein family HMM PF01642; match to protein family HMM TIGR00641 A0R1U9 No unknown NC_008596.1 Mycobrowser_v3 CDS 4978264 4979124 . + 0 MSMEG_4882 MSMEG_4882 short chain dehydrogenase identified by match to protein family HMM PF00106 A0R1V0 No unknown NC_008596.1 Mycobrowser_v3 CDS 4979121 4980611 . + 0 MSMEG_4883 MSMEG_4883 AMP-dependent synthetase and ligase identified by match to protein family HMM PF00501 A0R1V1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4980630 4980932 . + 0 MSMEG_4884 MSMEG_4884 conserved hypothetical protein A0R1V2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4980943 4982244 . + 0 MSMEG_4886 MSMEG_4886 major facilitator family protein transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0R1V3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4982241 4983317 . - 0 MSMEG_4885 MSMEG_4885 conserved hypothetical protein A0R1V4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4983314 4984516 . - 0 MSMEG_4887 MSMEG_4887 cytochrome P450 identified by match to protein family HMM PF00067 A0R1V5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4984613 4985614 . - 0 MSMEG_4888 MSMEG_4888 periplasmic binding proteins and sugar binding domain of the LacI family protein, putative identified by match to protein family HMM PF00356; match to protein family HMM PF00532 A0R1V6 No unknown NC_008596.1 Mycobrowser_v3 CDS 4985611 4986933 . - 0 MSMEG_4889 MSMEG_4889 integral membrane transport protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0R1V7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4987073 4987606 . - 0 MSMEG_4890 ahpD alkylhydroperoxidase, AhpD family protein identified by match to protein family HMM PF02627; match to protein family HMM TIGR00777; match to protein family HMM TIGR00778 Q50441 No unknown Rv2429 Rv2429 NC_008596.1 Mycobrowser_v3 CDS 4987610 4988197 . - 0 MSMEG_4891 MSMEG_4891 alkylhydroperoxide reductase identified by match to protein family HMM PF00578 A0R1V9 No unknown Rv2428 Rv2428 NC_008596.1 Mycobrowser_v3 CDS 4988811 4990256 . + 0 MSMEG_4893 MSMEG_4893 Putative neutral zinc metallopeptidase A0R1W1 No unknown Rv0419 Rv0419 NC_008596.1 Mycobrowser_v3 CDS 4990300 4990884 . + 0 MSMEG_4894 MSMEG_4894 conserved hypothetical protein A0R1W2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4990906 4991022 . - 0 MSMEG_4895 MSMEG_4895 hypothetical protein identified by Glimmer2; putative A0R1W3 No unknown NC_008596.1 Mycobrowser_v3 CDS 4990987 4992840 . + 0 MSMEG_4896 MSMEG_4896 non-ribosomal peptide synthetase identified by match to protein family HMM PF00501 A0R1W4 No unknown NC_008596.1 Mycobrowser_v3 CDS 4993024 4993398 . + 0 MSMEG_4898 MSMEG_4898 conserved hypothetical protein A0R1W5 No unknown Rv1343c Rv1343c NC_008596.1 Mycobrowser_v3 CDS 4993399 4993743 . + 0 MSMEG_4900 MSMEG_4900 Pks14 protein A0R1W6 No unknown Rv1342c Rv1342c NC_008596.1 Mycobrowser_v3 CDS 4993740 4994342 . - 0 MSMEG_4899 rdgB non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family protein identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042 A0R1W7 No unknown Rv1341 Rv1341 NC_008596.1 Mycobrowser_v3 CDS 4994349 4995128 . - 0 MSMEG_4901 rph ribonuclease PH identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966 A0R1W8 No unknown Rv1340 Rv1340 NC_008596.1 Mycobrowser_v3 CDS 4995163 4995921 . - 0 MSMEG_4902 MSMEG_4902 metal-dependent hydrolase of the beta-lactamase superfamily protein III A0R1W9 No unknown Rv1339 Rv1339 NC_008596.1 Mycobrowser_v3 CDS 4995984 4996817 . - 0 MSMEG_4903 murI glutamate racemase identified by match to protein family HMM PF01177; match to protein family HMM TIGR00067 A0R1X0 No unknown Rv1338 Rv1338 NC_008596.1 Mycobrowser_v3 CDS 4996814 4997473 . - 0 MSMEG_4904 MSMEG_4904 rhomboid family protein identified by match to protein family HMM PF01694 A0R1X1 No unknown Rv1337 Rv1337 NC_008596.1 Mycobrowser_v3 rRNA 5024201 5024318 . - 0 MSMEG_4929 rrfB 5S ribosomal RNA No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 4997511 4998482 . - 0 MSMEG_4905 cysM cysteine synthase B identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136 A0R1X2 No unknown Rv1336 Rv1336 NC_008596.1 Mycobrowser_v3 CDS 4998490 4998771 . - 0 MSMEG_4906 MSMEG_4906 ThiS family protein identified by match to protein family HMM PF02597 A0R1X3 No unknown Rv1335 Rv1335 NC_008596.1 Mycobrowser_v3 CDS 5014034 5014924 . - 0 MSMEG_4917 MSMEG_4917 tetratricopeptide repeat domain protein identified by match to protein family HMM PF00085; match to protein family HMM PF07719 A0R1Y5 No unknown Rv1324 Rv1324 NC_008596.1 Mycobrowser_v3 CDS 5014938 5015321 . - 0 MSMEG_4919 MSMEG_4919 conserved hypothetical protein A0R1Y6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5015379 5016614 . - 0 MSMEG_4920 MSMEG_4920 acetyl-CoA acetyltransferase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0R1Y7 No unknown Rv1323 Rv1323 NC_008596.1 Mycobrowser_v3 CDS 5016676 5017149 . + 0 MSMEG_4921 mce methylmalonyl-CoA epimerase identified by match to protein family HMM PF00903; match to protein family HMM TIGR03081 A0R1Y8 No unknown Rv1322A Rv1322A NC_008596.1 Mycobrowser_v3 CDS 5017167 5017466 . - 0 MSMEG_4922 MSMEG_4922 conserved hypothetical protein A0R1Y9 No unknown Rv1322 Rv1322 NC_008596.1 Mycobrowser_v3 CDS 5017466 5018140 . - 0 MSMEG_4923 MSMEG_4923 conserved hypothetical protein identified by match to protein family HMM PF01939 A0R1Z0 No unknown Rv1321 Rv1321 NC_008596.1 Mycobrowser_v3 CDS 5018187 5019794 . + 0 MSMEG_4924 MSMEG_4924 adenylate cyclase, family protein 3 identified by match to protein family HMM PF00211; match to protein family HMM PF00672 A0R1Z1 No unknown Rv1318c,Rv1319c Rv1318c,Rv1319c NC_008596.1 Mycobrowser_v3 CDS 5019822 5021360 . + 0 MSMEG_4925 MSMEG_4925 transcriptional regulator, Ada family protein/DNA-3-methyladenine glycosylase II identified by match to protein family HMM PF00165; match to protein family HMM PF00730; match to protein family HMM PF02805; match to protein family HMM PF06029 A0R1Z2 No unknown Rv1317c Rv1317c NC_008596.1 Mycobrowser_v3 CDS 5021497 5022819 . + 0 MSMEG_4926 MSMEG_4926 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5022827 5023528 . - 0 MSMEG_4927 MSMEG_4927 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5023632 5024129 . + 0 MSMEG_4928 MSMEG_4928 methylated-DNA--protein-cysteine methyltransferase identified by match to protein family HMM PF01035; match to protein family HMM PF02870; match to protein family HMM TIGR00589 A0R1Z5 No unknown Rv1316c Rv1316c NC_008596.1 Mycobrowser_v3 CDS 5029849 5031105 . - 0 MSMEG_4932 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase identified by match to protein family HMM PF00275; match to protein family HMM TIGR01072 A0R1Z6 No unknown Rv1315 Rv1315 NC_008596.1 Mycobrowser_v3 tRNA 4764493 4764563 . + 0 MSMEG_4676 MSMEG_4676 tRNA-Gly No unknown NC_008596.1 Mycobrowser_v3 CDS 5032627 5034054 . - 0 MSMEG_4936 atpD ATP synthase F1, beta subunit identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR01039 A0R200 No unknown Rv1310 Rv1310 NC_008596.1 Mycobrowser_v3 CDS 5034092 5035015 . - 0 MSMEG_4937 atpG ATP synthase F1, gamma subunit identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146 A0R201 No unknown Rv1309 Rv1309 NC_008596.1 Mycobrowser_v3 CDS 5035023 5036669 . - 0 MSMEG_4938 atpA ATP synthase F1, alpha subunit identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR00962 A0R202 No unknown Rv1308 Rv1308 NC_008596.1 Mycobrowser_v3 CDS 5038054 5038566 . - 0 MSMEG_4940 MSMEG_4940 bacteriophage lysis protein identified by match to protein family HMM PF00430; match to protein family HMM PF03245 A0R204 No unknown Rv1306 Rv1306 NC_008596.1 Mycobrowser_v3 CDS 5038576 5038836 . - 0 MSMEG_4941 atpE ATP synthase F0, C subunit identified by similarity to SP:P41173; match to protein family HMM PF00137; match to protein family HMM TIGR01260 A0R205 No unknown Rv1305 Rv1305 NC_008596.1 Mycobrowser_v3 CDS 5038938 5039696 . - 0 MSMEG_4942 atpB ATP synthase F0, A subunit identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131 A0R206 No unknown Rv1304 Rv1304 NC_008596.1 Mycobrowser_v3 CDS 5039725 5040171 . - 0 MSMEG_4943 MSMEG_4943 conserved hypothetical protein A0R207 No unknown Rv1303 Rv1303 NC_008596.1 Mycobrowser_v3 CDS 5040168 5040740 . - 0 MSMEG_4944 MSMEG_4944 hypothetical protein identified by Glimmer2; putative A0R208 No unknown NC_008596.1 Mycobrowser_v3 CDS 5040459 5041781 . + 0 MSMEG_4945 MSMEG_4945 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5041789 5042490 . - 0 MSMEG_4946 MSMEG_4946 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5042722 5043942 . - 0 MSMEG_4947 MSMEG_4947 glycosyl trasferase identified by match to protein family HMM PF00953 A0R211 No unknown Rv1302 Rv1302 NC_008596.1 Mycobrowser_v3 CDS 5043950 5044615 . - 0 MSMEG_4948 MSMEG_4948 Sua5/YciO/YrdC/YwlC family protein identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057 A0R212 No unknown Rv1301 Rv1301 NC_008596.1 Mycobrowser_v3 CDS 5044653 5045498 . - 0 MSMEG_4949 MSMEG_4949 modification methylase, HemK family protein identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536 A0R213 No unknown Rv1300 Rv1300 NC_008596.1 Mycobrowser_v3 CDS 5045509 5046588 . - 0 MSMEG_4950 prfA peptide chain release factor 1 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019 A0R214 No unknown Rv1299 Rv1299 NC_008596.1 Mycobrowser_v3 CDS 5046684 5046911 . - 0 MSMEG_4951 rpmE ribosomal protein L31 identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105 A0R215 No unknown Rv1298 Rv1298 NC_008596.1 Mycobrowser_v3 CDS 5089843 5090820 . + 0 MSMEG_4995 MSMEG_4995 oligopeptide transport system permease protein AppB identified by match to protein family HMM PF00528 A0R258 No unknown Rv1283c Rv1283c NC_008596.1 Mycobrowser_v3 CDS 5047025 5048623 . - 0 MSMEG_4952 MSMEG_4952 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R216 No unknown Rv1750c Rv1750c NC_008596.1 Mycobrowser_v3 CDS 5048768 5049373 . + 0 MSMEG_4953 MSMEG_4953 putative transcriptional regulator identified by match to protein family HMM PF00440 A0R217 No unknown NC_008596.1 Mycobrowser_v3 CDS 5049428 5051422 . - 0 MSMEG_4954 rho transcription termination factor Rho identified by match to protein family HMM PF00006; match to protein family HMM PF07497; match to protein family HMM PF07498; match to protein family HMM TIGR00767 A0R218 No unknown Rv1297 Rv1297 NC_008596.1 Mycobrowser_v3 CDS 5051708 5052661 . - 0 MSMEG_4955 thrB homoserine kinase identified by match to protein family HMM PF00288; match to protein family HMM TIGR00191 A0R219 No unknown Rv1296 Rv1296 NC_008596.1 Mycobrowser_v3 CDS 5052675 5053757 . - 0 MSMEG_4956 thrC threonine synthase identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260 A0R220 No unknown Rv1295 Rv1295 NC_008596.1 Mycobrowser_v3 CDS 5053754 5055073 . - 0 MSMEG_4957 MSMEG_4957 homoserine dehydrogenase identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447 A0R221 No unknown Rv1294 Rv1294 NC_008596.1 Mycobrowser_v3 CDS 5055070 5056494 . - 0 MSMEG_4958 lysA diaminopimelate decarboxylase identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048 Q9X5M1 No unknown Rv1293 Rv1293 NC_008596.1 Mycobrowser_v3 CDS 5056491 5058143 . - 0 MSMEG_4959 argS arginyl-tRNA synthetase identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456 Q9X5M0 No unknown Rv1292 Rv1292 NC_008596.1 Mycobrowser_v3 CDS 5059059 5059334 . - 0 MSMEG_4961 MSMEG_4961 hypothetical protein identified by Glimmer2; putative A0R224 No unknown NC_008596.1 Mycobrowser_v3 CDS 5059596 5060855 . + 0 MSMEG_4963 MSMEG_4963 peptide synthetase ScpsB, putative identified by match to protein family HMM PF00668 A0R225 No unknown NC_008596.1 Mycobrowser_v3 CDS 5060847 5062073 . - 0 MSMEG_4962 MSMEG_4962 RemO protein identified by match to protein family HMM PF01266; match to protein family HMM PF01494 A0R226 No unknown Rv1751 Rv1751 NC_008596.1 Mycobrowser_v3 CDS 5062076 5062879 . - 0 MSMEG_4964 MSMEG_4964 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R227 No unknown NC_008596.1 Mycobrowser_v3 CDS 5075384 5076751 . - 0 MSMEG_4980 MSMEG_4980 major facilitator superfamily protein MFS_1 identified by match to protein family HMM PF07690 A0R243 No unknown NC_008596.1 Mycobrowser_v3 rRNA 5024420 5027583 . - 0 MSMEG_4930 rrlB 23S ribosomal RNA No unknown NC_008596.1 Mycobrowser_v3 CDS 5076771 5077787 . - 0 MSMEG_4981 MSMEG_4981 phosphotransferase enzyme family protein, putative identified by match to protein family HMM PF01636 A0R244 No unknown NC_008596.1 Mycobrowser_v3 CDS 5077781 5078908 . - 0 MSMEG_4982 MSMEG_4982 conserved hypothetical protein A0R245 No unknown NC_008596.1 Mycobrowser_v3 CDS 5078986 5079549 . + 0 MSMEG_4983 MSMEG_4983 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R246 No unknown NC_008596.1 Mycobrowser_v3 CDS 5079613 5080017 . + 0 MSMEG_4984 MSMEG_4984 conserved hypothetical protein, putative identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369 A0R247 No unknown Rv1532c Rv1532c NC_008596.1 Mycobrowser_v3 CDS 5080106 5080597 . - 0 MSMEG_4985 MSMEG_4985 carbonic anhydrase identified by match to protein family HMM PF00484 A0R248 No unknown Rv1284 Rv1284 NC_008596.1 Mycobrowser_v3 CDS 5123453 5124289 . - 0 MSMEG_5025 MSMEG_5025 putative transcriptional regulator A0R289 No unknown NC_008596.1 Mycobrowser_v3 CDS 5080643 5082547 . - 0 MSMEG_4986 MSMEG_4986 glycosyl transferase, family protein 39 identified by match to protein family HMM PF02366 A0R249 No unknown NC_008596.1 Mycobrowser_v3 CDS 5082551 5083849 . - 0 MSMEG_4987 MSMEG_4987 glycosyl transferase identified by match to protein family HMM PF00535; match to protein family HMM PF04138 A0R250 No unknown NC_008596.1 Mycobrowser_v3 CDS 5083905 5085776 . - 0 MSMEG_4988 MSMEG_4988 integral membrane protein identified by match to protein family HMM PF02366 A0R251 No unknown NC_008596.1 Mycobrowser_v3 CDS 5085828 5087411 . - 0 MSMEG_4989 MSMEG_4989 sensor histidine kinase identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 A0R252 No unknown Rv3764c Rv3764c NC_008596.1 Mycobrowser_v3 CDS 5087389 5088138 . - 0 MSMEG_4990 MSMEG_4990 DNA-binding response regulator identified by match to protein family HMM PF00072; match to protein family HMM PF00486 A0R253 No unknown Rv3765c Rv3765c NC_008596.1 Mycobrowser_v3 CDS 5088250 5088714 . + 0 MSMEG_4992 MSMEG_4992 hypothetical protein identified by Glimmer2; putative A0R254 No unknown NC_008596.1 Mycobrowser_v3 CDS 5090817 5091749 . + 0 MSMEG_4996 oppC ABC transporter, permease protein OppC identified by match to protein family HMM PF00528 A0R259 No unknown Rv1282c Rv1282c NC_008596.1 Mycobrowser_v3 CDS 5091746 5093590 . + 0 MSMEG_4997 oppD ABC transporter, ATP-binding protein OppD identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727 A0R260 No unknown Rv1281c Rv1281c NC_008596.1 Mycobrowser_v3 CDS 5093630 5095336 . + 0 MSMEG_4999 MSMEG_4999 bacterial extracellular solute-binding protein, family protein 5 identified by match to protein family HMM PF00496 A0R261 No unknown Rv1280c Rv1280c NC_008596.1 Mycobrowser_v3 CDS 5095326 5096555 . - 0 MSMEG_4998 MSMEG_4998 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0R262 No unknown NC_008596.1 Mycobrowser_v3 CDS 5096638 5097858 . + 0 MSMEG_5001 MSMEG_5001 pesticide degrading monooxygenase identified by match to protein family HMM PF08028 A0R263 No unknown NC_008596.1 Mycobrowser_v3 CDS 5097849 5098754 . - 0 MSMEG_5000 MSMEG_5000 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R264 No unknown NC_008596.1 Mycobrowser_v3 CDS 5098832 5099509 . + 0 MSMEG_5003 MSMEG_5003 O-methyltransferase, family protein 3 identified by match to protein family HMM PF01596 A0R265 No unknown NC_008596.1 Mycobrowser_v3 CDS 5099506 5102139 . - 0 MSMEG_5002 MSMEG_5002 conserved hypothetical protein A0R266 No unknown Rv1278 Rv1278 NC_008596.1 Mycobrowser_v3 CDS 5102136 5103290 . - 0 MSMEG_5004 MSMEG_5004 DNA repair exonuclease identified by match to protein family HMM PF00149 A0R267 No unknown Rv1277 Rv1277 NC_008596.1 Mycobrowser_v3 CDS 5103405 5103905 . + 0 MSMEG_5006 MSMEG_5006 phosphohistidine phosphatase identified by match to protein family HMM PF00300 A0R268 No unknown Rv1276c Rv1276c NC_008596.1 Mycobrowser_v3 CDS 5103902 5104462 . - 0 MSMEG_5005 MSMEG_5005 LprC protein A0R269 No unknown Rv1275 Rv1275 NC_008596.1 Mycobrowser_v3 CDS 5104459 5104992 . - 0 MSMEG_5007 MSMEG_5007 LprB protein A0R270 No unknown Rv1274 Rv1274 NC_008596.1 Mycobrowser_v3 CDS 5134121 5134708 . + 0 MSMEG_5040 MSMEG_5040 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R2A1 No unknown Rv1255c Rv1255c NC_008596.1 Mycobrowser_v3 CDS 5132901 5134121 . + 0 MSMEG_5038 MSMEG_5038 putative cytochrome P450 123 identified by match to protein family HMM PF00067 A0R2A0 No unknown Rv1256c Rv1256c NC_008596.1 Mycobrowser_v3 CDS 5105176 5106912 . + 0 MSMEG_5008 MSMEG_5008 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF00664 A0R271 No unknown Rv1273c Rv1273c NC_008596.1 Mycobrowser_v3 CDS 5106924 5108801 . + 0 MSMEG_5009 MSMEG_5009 ABC transporter identified by match to protein family HMM PF00005; match to protein family HMM PF00664 A0R272 No unknown Rv1272c Rv1272c NC_008596.1 Mycobrowser_v3 CDS 5108808 5109329 . - 0 MSMEG_5010 MSMEG_5010 conserved hypothetical protein A0R273 No unknown Rv1265 Rv1265 NC_008596.1 Mycobrowser_v3 CDS 5109367 5109666 . + 0 MSMEG_5012 MSMEG_5012 trans-sialidase, putative A0R274 No unknown NC_008596.1 Mycobrowser_v3 CDS 5109663 5110502 . + 0 MSMEG_5013 MSMEG_5013 conserved hypothetical protein identified by match to protein family HMM PF01987 A0R276 No unknown NC_008596.1 Mycobrowser_v3 CDS 5110506 5112737 . - 0 MSMEG_5014 MSMEG_5014 copper-translocating P-type ATPase identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525 A0R277 No unknown Rv0969 Rv0969 NC_008596.1 Mycobrowser_v3 CDS 5112759 5113583 . - 0 MSMEG_5015 MSMEG_5015 secreted protein A0R278 No unknown NC_008596.1 Mycobrowser_v3 CDS 5113573 5113779 . - 0 MSMEG_5016 MSMEG_5016 conserved domain protein identified by match to protein family HMM PF00403 A0R279 No unknown NC_008596.1 Mycobrowser_v3 CDS 5113830 5114435 . - 0 MSMEG_5017 MSMEG_5017 lipoprotein identified by match to protein family HMM PF03713 A0R280 No unknown NC_008596.1 Mycobrowser_v3 CDS 5114459 5115583 . - 0 MSMEG_5018 MSMEG_5018 Adenylate and Guanylate cyclase catalytic domain protein identified by match to protein family HMM PF00211 A0R281 No unknown Rv1264 Rv1264 NC_008596.1 Mycobrowser_v3 CDS 5115599 5116885 . - 0 MSMEG_5019 MSMEG_5019 regulatory protein identified by match to protein family HMM PF01590 A0R282 No unknown NC_008596.1 Mycobrowser_v3 CDS 5116927 5117706 . - 0 MSMEG_5020 MSMEG_5020 acetoin(diacetyl) reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR02415 A0R283 No unknown NC_008596.1 Mycobrowser_v3 CDS 5414528 5414827 . + 0 MSMEG_5328 MSMEG_5328 conserved hypothetical protein A0R336 No unknown NC_008596.1 Mycobrowser_v3 CDS 5117738 5118784 . - 0 MSMEG_5021 MSMEG_5021 alcohol dehydrogenase, zinc-containing identified by match to protein family HMM PF00107 A0R284 No unknown NC_008596.1 Mycobrowser_v3 tRNA 5509404 5509475 . + 0 MSMEG_5425 MSMEG_5425 tRNA-Gln No unknown NC_008596.1 Mycobrowser_v3 CDS 5118895 5120736 . + 0 MSMEG_5022 MSMEG_5022 flavin-containing monooxygenase FMO identified by match to protein family HMM PF07992 A0R285 No unknown NC_008596.1 Mycobrowser_v3 CDS 5120775 5121482 . + 0 MSMEG_5023 MSMEG_5023 chitooligosaccharide deacetylase identified by match to protein family HMM PF01522 A0R286 No unknown NC_008596.1 Mycobrowser_v3 CDS 5121479 5121967 . + 0 MSMEG_5024 MSMEG_5024 T/U mismatch-specific DNA glycosylase A0R287 No unknown NC_008596.1 Mycobrowser_v3 CDS 5122023 5123474 . + 0 MSMEG_5026 MSMEG_5026 conserved hypothetical protein identified by match to protein family HMM PF02720 A0R288 No unknown Rv0336 Rv0336 NC_008596.1 Mycobrowser_v3 CDS 5124317 5124787 . + 0 MSMEG_5027 MSMEG_5027 glyoxalase family protein identified by match to protein family HMM PF00903 A0R290 No unknown NC_008596.1 Mycobrowser_v3 CDS 5124797 5125234 . + 0 MSMEG_5028 MSMEG_5028 HIT family protein identified by match to protein family HMM PF01230 A0R291 No unknown Rv1262c Rv1262c NC_008596.1 Mycobrowser_v3 CDS 5125244 5125693 . + 0 MSMEG_5030 MSMEG_5030 conserved hypothetical protein TIGR00026 identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0R292 No unknown Rv1261c Rv1261c NC_008596.1 Mycobrowser_v3 CDS 5125690 5126739 . - 0 MSMEG_5029 MSMEG_5029 alkanal monooxygenase alpha chain identified by match to protein family HMM PF00296 A0R293 No unknown NC_008596.1 Mycobrowser_v3 CDS 5126753 5127625 . - 0 MSMEG_5031 MSMEG_5031 uracil-DNA glycosylase superfamily protein identified by match to protein family HMM PF03167 A0R294 No unknown Rv1259 Rv1259 NC_008596.1 Mycobrowser_v3 CDS 5128678 5129328 . - 0 MSMEG_5032 MSMEG_5032 putative transcriptional regulator identified by match to protein family HMM PF01638 A0R295 No unknown NC_008596.1 Mycobrowser_v3 CDS 5129405 5130091 . + 0 MSMEG_5034 MSMEG_5034 hypothetical protein identified by Glimmer2; putative A0R296 No unknown NC_008596.1 Mycobrowser_v3 CDS 5130102 5130584 . + 0 MSMEG_5035 MSMEG_5035 conserved hypothetical protein A0R297 No unknown NC_008596.1 Mycobrowser_v3 CDS 5130603 5131970 . + 0 MSMEG_5037 MSMEG_5037 oxidoreductase, FAD-binding identified by match to protein family HMM PF01565; match to protein family HMM PF02913 A0R298 No unknown Rv1257c Rv1257c NC_008596.1 Mycobrowser_v3 CDS 5131967 5132719 . - 0 MSMEG_5036 MSMEG_5036 rhomboid family protein identified by match to protein family HMM PF01694 A0R299 No unknown Rv0110 Rv0110 NC_008596.1 Mycobrowser_v3 CDS 5134693 5135370 . - 0 MSMEG_5039 MSMEG_5039 Siderophore-interacting protein identified by match to protein family HMM PF04954; match to protein family HMM PF08021 A0R2A2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5135426 5136574 . - 0 MSMEG_5041 MSMEG_5041 probable acyltransferase identified by match to protein family HMM PF01757 A0R2A3 No unknown Rv1254 Rv1254 NC_008596.1 Mycobrowser_v3 CDS 5136571 5138316 . - 0 MSMEG_5042 MSMEG_5042 ATP-dependent rna helicase, dead/deah box family protein identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880 A0R2A4 No unknown Rv1253 Rv1253 NC_008596.1 Mycobrowser_v3 CDS 5138407 5138946 . + 0 MSMEG_5043 MSMEG_5043 LprE protein A0R2A5 No unknown Rv1252c Rv1252c NC_008596.1 Mycobrowser_v3 CDS 5168711 5169850 . + 0 MSMEG_5068 MSMEG_5068 Mrp protein identified by match to protein family HMM PF01883 A0R2D0 No unknown Rv1229c Rv1229c NC_008596.1 Mycobrowser_v3 CDS 5138997 5142446 . + 0 MSMEG_5044 MSMEG_5044 ATPase A0R2A6 No unknown Rv1251c Rv1251c NC_008596.1 Mycobrowser_v3 CDS 5142459 5143814 . + 0 MSMEG_5045 MSMEG_5045 D-2-hydroxyglutarate dehydrogenase identified by match to protein family HMM PF01565; match to protein family HMM PF02913 A0R2A7 No unknown Rv0161 Rv0161 NC_008596.1 Mycobrowser_v3 CDS 5143822 5145528 . - 0 MSMEG_5046 MSMEG_5046 drug transporter identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711 A0R2A8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5145619 5146872 . - 0 MSMEG_5047 MSMEG_5047 drug resistance transporter Bcr/CflA subfamily protein identified by match to protein family HMM PF07690; match to protein family HMM TIGR00710 A0R2A9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5147070 5147831 . + 0 MSMEG_5048 MSMEG_5048 conserved hypothetical protein A0R2B0 No unknown Rv1249c Rv1249c NC_008596.1 Mycobrowser_v3 CDS 5160948 5161865 . - 0 MSMEG_5060 MSMEG_5060 ABC transporter, permease protein SugA identified by match to protein family HMM PF00528 A0R2C2 No unknown Rv1236 Rv1236 NC_008596.1 Mycobrowser_v3 CDS 5193475 5194176 . + 0 MSMEG_5093 MSMEG_5093 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5147981 5151664 . + 0 MSMEG_5049 sucA 2-oxoglutarate dehydrogenase, E1 component identified by match to protein family HMM PF00198; match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239 A0R2B1 No unknown Rv1248c Rv1248c NC_008596.1 Mycobrowser_v3 tRNA 5550049 5550124 . - 0 MSMEG_5467 MSMEG_5467 tRNA-Ala No unknown NC_008596.1 Mycobrowser_v3 CDS 5151761 5153071 . + 0 MSMEG_5051 MSMEG_5051 major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0R2B2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5153068 5153832 . - 0 MSMEG_5050 map methionine aminopeptidase, type I identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500 A0R2B3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5153902 5154162 . + 0 MSMEG_5052 MSMEG_5052 DNA-binding protein identified by match to protein family HMM PF01381 A0R2B4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5154241 5155065 . + 0 MSMEG_5053 MSMEG_5053 short chain alcohol dehydrogenase identified by match to protein family HMM PF00106 A0R2B5 No unknown Rv1245c Rv1245c NC_008596.1 Mycobrowser_v3 CDS 5169857 5170255 . - 0 MSMEG_5069 MSMEG_5069 sec-independent translocase identified by match to protein family HMM TIGR01410 A0R2D1 No unknown Rv1224 Rv1224 NC_008596.1 Mycobrowser_v3 CDS 5155073 5155915 . - 0 MSMEG_5054 MSMEG_5054 ABC transporter, quaternary amine uptake transporter (QAT) family protein, substrate-binding protein identified by match to protein family HMM PF04069 A0R2B6 No unknown Rv1244 Rv1244 NC_008596.1 Mycobrowser_v3 CDS 5155924 5157066 . - 0 MSMEG_5055 MSMEG_5055 NAD-dependent malic enzyme identified by match to protein family HMM PF00390; match to protein family HMM PF03949 A0R2B7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5157213 5158280 . + 0 MSMEG_5056 corA magnesium and cobalt transport protein CorA identified by match to protein family HMM PF01544; match to protein family HMM TIGR00383 A0R2B8 No unknown Rv1239c Rv1239c NC_008596.1 Mycobrowser_v3 CDS 5158285 5158890 . - 0 MSMEG_5057 MSMEG_5057 conserved hypothetical protein A0R2B9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5158887 5160107 . - 0 MSMEG_5058 MSMEG_5058 ABC transporter, ATP-binding protein SugC identified by match to protein family HMM PF00005 A0R2C0 No unknown Rv1238 Rv1238 NC_008596.1 Mycobrowser_v3 CDS 5160112 5160948 . - 0 MSMEG_5059 MSMEG_5059 ABC transporter, permease protein SugB identified by match to protein family HMM PF00528 A0R2C1 No unknown Rv1237 Rv1237 NC_008596.1 Mycobrowser_v3 CDS 5209320 5209718 . + 0 MSMEG_5108 MSMEG_5108 conserved hypothetical protein A0R2G8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5161862 5163259 . - 0 MSMEG_5061 MSMEG_5061 Bacterial extracellular solute-binding protein identified by match to protein family HMM PF01547 A0R2C3 No unknown Rv1235 Rv1235 NC_008596.1 Mycobrowser_v3 CDS 5163424 5163882 . - 0 MSMEG_5062 MSMEG_5062 conserved hypothetical protein A0R2C4 No unknown Rv1234 Rv1234 NC_008596.1 Mycobrowser_v3 CDS 5164005 5164454 . + 0 MSMEG_5063 MSMEG_5063 integral membrane protein A0R2C5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5164473 5165429 . - 0 MSMEG_5064 MSMEG_5064 malyl-CoA lyase identified by match to protein family HMM PF03328 A0R2C6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5165455 5166741 . + 0 MSMEG_5065 MSMEG_5065 Mg/Co/Ni transporter MgtE identified by match to protein family HMM PF00571; match to protein family HMM PF03448 A0R2C7 No unknown Rv1232c Rv1232c NC_008596.1 Mycobrowser_v3 CDS 5166738 5167286 . + 0 MSMEG_5066 MSMEG_5066 integral membrane protein identified by match to protein family HMM PF06210 A0R2C8 No unknown Rv1231c Rv1231c NC_008596.1 Mycobrowser_v3 CDS 5167401 5168702 . + 0 MSMEG_5067 MSMEG_5067 secreted protein A0R2C9 No unknown Rv1230c Rv1230c NC_008596.1 Mycobrowser_v3 CDS 5275385 5276035 . - 0 MSMEG_5176 MSMEG_5176 methyltransferase type 11 A0R2N4 No unknown Rv1147 Rv1147 NC_008596.1 Mycobrowser_v3 CDS 5170258 5171754 . - 0 MSMEG_5070 MSMEG_5070 Trypsin identified by match to protein family HMM PF00089 A0R2D2 No unknown Rv1223 Rv1223 NC_008596.1 Mycobrowser_v3 CDS 5171803 5172201 . - 0 MSMEG_5071 MSMEG_5071 conserved hypothetical protein A0R2D3 No unknown Rv1222 Rv1222 NC_008596.1 Mycobrowser_v3 CDS 5172290 5173063 . - 0 MSMEG_5072 MSMEG_5072 extracytoplasmic function alternative sigma factor identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0R2D4 No unknown Rv1221 Rv1221 NC_008596.1 Mycobrowser_v3 CDS 5173240 5173872 . + 0 MSMEG_5073 MSMEG_5073 O-methyltransferase, family protein 3 identified by match to protein family HMM PF01596 A0R2D5 No unknown Rv1220c Rv1220c NC_008596.1 Mycobrowser_v3 CDS 5173964 5174614 . + 0 MSMEG_5074 MSMEG_5074 probable transcriptional regulatory protein identified by match to protein family HMM PF00440 A0R2D6 No unknown Rv1219c Rv1219c NC_008596.1 Mycobrowser_v3 CDS 5174611 5175513 . + 0 MSMEG_5075 MSMEG_5075 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0R2D7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5175510 5177072 . + 0 MSMEG_5076 MSMEG_5076 ABC transporter membrane-spanning protein A0R2D8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5178352 5179566 . - 0 MSMEG_5078 glgC glucose-1-phosphate adenylyltransferase identified by match to protein family HMM PF00483; match to protein family HMM TIGR02091 A0R2E1 No unknown Rv1213 Rv1213 NC_008596.1 Mycobrowser_v3 tRNA 5834094 5834167 . - 0 MSMEG_5755 MSMEG_5755 tRNA-Phe No unknown NC_008596.1 Mycobrowser_v3 CDS 5179761 5180924 . + 0 MSMEG_5080 MSMEG_5080 glycogen synthase identified by match to protein family HMM PF00534; match to protein family HMM TIGR02149 A0R2E2 No unknown Rv1212c Rv1212c NC_008596.1 Mycobrowser_v3 CDS 5180979 5181146 . - 0 MSMEG_5081 MSMEG_5081 conserved hypothetical protein A0R2E3 No unknown Rv1211 Rv1211 NC_008596.1 Mycobrowser_v3 CDS 5181263 5181892 . - 0 MSMEG_5082 tag DNA-3-methyladenine glycosylase I identified by match to protein family HMM PF03352; match to protein family HMM TIGR00624 A0R2E4 No unknown Rv1210 Rv1210 NC_008596.1 Mycobrowser_v3 CDS 5181889 5182272 . - 0 MSMEG_5083 MSMEG_5083 conserved hypothetical protein A0R2E5 No unknown Rv1209 Rv1209 NC_008596.1 Mycobrowser_v3 CDS 5182312 5183223 . - 0 MSMEG_5084 MSMEG_5084 glycosyl transferase, group 2 family protein identified by match to protein family HMM PF00535 A0R2E6 No unknown Rv1208 Rv1208 NC_008596.1 Mycobrowser_v3 CDS 5183268 5184143 . - 0 MSMEG_5085 folP dihydropteroate synthase identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496 A0R2E7 No unknown Rv1207 Rv1207 NC_008596.1 Mycobrowser_v3 CDS 5184162 5185940 . - 0 MSMEG_5086 MSMEG_5086 very-long-chain acyl-CoA synthetase identified by match to protein family HMM PF00501 A0R2E8 No unknown Rv1206 Rv1206 NC_008596.1 Mycobrowser_v3 CDS 5186042 5186626 . - 0 MSMEG_5087 MSMEG_5087 conserved hypothetical protein identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730 A0R2E9 No unknown Rv1205 Rv1205 NC_008596.1 Mycobrowser_v3 CDS 5186695 5188770 . + 0 MSMEG_5088 MSMEG_5088 tetratricopeptide repeat family protein identified by match to protein family HMM PF07721 A0R2F0 No unknown Rv1204c Rv1204c NC_008596.1 Mycobrowser_v3 CDS 5188843 5191101 . + 0 MSMEG_5089 MSMEG_5089 conserved hypothetical protein A0R2F1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5191194 5191916 . + 0 MSMEG_5090 MSMEG_5090 conserved hypothetical protein A0R2F2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5192084 5193022 . + 0 MSMEG_5091 MSMEG_5091 hypothetical protein identified by Glimmer2; putative A0R2F3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5193071 5193205 . + 0 MSMEG_5092 MSMEG_5092 hypothetical protein identified by Glimmer2; putative A0R2F4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5210371 5211210 . - 0 MSMEG_5109 MSMEG_5109 conserved hypothetical protein A0R2H0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5194184 5195506 . - 0 MSMEG_5094 MSMEG_5094 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5196509 5196844 . - 0 MSMEG_5096 MSMEG_5096 ISMsm1, transposase orfA identified by similarity to GP:16551202; match to protein family HMM PF01527 A0QT63 No unknown NC_008596.1 Mycobrowser_v3 CDS 5196939 5197652 . + 0 MSMEG_5097 MSMEG_5097 hypothetical protein identified by Glimmer2; putative A0R2F8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5197576 5198595 . + 0 MSMEG_5099 MSMEG_5099 conserved hypothetical protein A0R2F9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5198422 5198538 . - 0 MSMEG_5098 MSMEG_5098 hypothetical protein identified by Glimmer2; putative A0R2G0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5198683 5199513 . + 0 MSMEG_5101 MSMEG_5101 hypothetical protein identified by Glimmer2; putative A0R2G1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5199494 5202979 . - 0 MSMEG_5100 MSMEG_5100 pyruvate ferredoxin/flavodoxin oxidoreductase family protein identified by match to protein family HMM PF01558 A0R2G2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5203097 5204719 . - 0 MSMEG_5102 MSMEG_5102 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0R2G3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5204819 5205886 . - 0 MSMEG_5103 dapE succinyl-diaminopimelate desuccinylase identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01900 A0R2G4 No unknown Rv1202 Rv1202 NC_008596.1 Mycobrowser_v3 CDS 5205921 5206865 . + 0 MSMEG_5104 MSMEG_5104 tetrahydropicolinate succinylase A0R2G5 No unknown Rv1201c Rv1201c NC_008596.1 Mycobrowser_v3 CDS 5206878 5207339 . - 0 MSMEG_5105 MSMEG_5105 hypothetical protein identified by Glimmer2; putative A0R2G6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5207358 5209097 . - 0 MSMEG_5106 MSMEG_5106 HNH endonuclease identified by match to protein family HMM PF01844; match to protein family HMM PF02720 A0R2G7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5209709 5210374 . - 0 MSMEG_5107 MSMEG_5107 secreted protein A0R2G9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5213151 5214557 . - 0 MSMEG_5114 MSMEG_5114 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R2H4 No unknown Rv1193 Rv1193 NC_008596.1 Mycobrowser_v3 CDS 5214644 5215138 . + 0 MSMEG_5116 MSMEG_5116 conserved hypothetical protein identified by match to protein family HMM PF03745 A0R2H5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5215146 5215685 . + 0 MSMEG_5118 MSMEG_5118 nudix hydrolase identified by match to protein family HMM PF00293 A0R2H6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5215682 5216635 . - 0 MSMEG_5117 MSMEG_5117 proline dehydrogenase identified by match to protein family HMM PF01619 A0R2H7 No unknown Rv1188 Rv1188 NC_008596.1 Mycobrowser_v3 CDS 5233598 5234785 . + 0 MSMEG_5131 MSMEG_5131 hypothetical protein identified by Glimmer2; putative A0R2I9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5216637 5218265 . - 0 MSMEG_5119 pruA 1-pyrroline-5-carboxylate dehydrogenase identified by match to protein family HMM PF00171; match to protein family HMM TIGR01236 A0R2H8 No unknown Rv1187 Rv1187 NC_008596.1 Mycobrowser_v3 CDS 5218349 5219926 . + 0 MSMEG_5120 MSMEG_5120 conserved hypothetical protein A0R2H9 No unknown Rv1186c Rv1186c NC_008596.1 Mycobrowser_v3 CDS 5219928 5221031 . - 0 MSMEG_5121 MSMEG_5121 aminotransferase, classes I and II identified by similarity to SP:P77434; match to protein family HMM PF00155 A0R2I0 No unknown Rv1178 Rv1178 NC_008596.1 Mycobrowser_v3 CDS 5221049 5221372 . - 0 MSMEG_5122 MSMEG_5122 ferredoxin identified by match to protein family HMM PF00037 A0R2I1 No unknown Rv1177 Rv1177 NC_008596.1 Mycobrowser_v3 CDS 5222843 5224858 . + 0 MSMEG_5124 MSMEG_5124 2,4-dienoyl-coA reductase identified by match to protein family HMM PF00070; match to protein family HMM PF00724; match to protein family HMM PF03486; match to protein family HMM PF07992 A0R2I2 No unknown Rv1175c Rv1175c NC_008596.1 Mycobrowser_v3 CDS 5224977 5225525 . - 0 MSMEG_5125 MSMEG_5125 YceI like family protein identified by match to protein family HMM PF04264 A0R2I3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5225815 5228439 . - 0 MSMEG_5126 MSMEG_5126 FO synthase identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423 A0R2I4 No unknown Rv1173 Rv1173 NC_008596.1 Mycobrowser_v3 CDS 5228643 5229797 . + 0 MSMEG_5127 MSMEG_5127 hypothetical protein identified by Glimmer2; putative A0R2I5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5229798 5230202 . - 0 MSMEG_5128 MSMEG_5128 conserved hypothetical protein A0R2I6 No unknown Rv1171 Rv1171 NC_008596.1 Mycobrowser_v3 tRNA 5834573 5834645 . + 0 MSMEG_5758 MSMEG_5758 tRNA-Lys No unknown NC_008596.1 Mycobrowser_v3 CDS 5230310 5231182 . - 0 MSMEG_5129 MSMEG_5129 N-Acetyl-1-D-myo-Inosityl-2-Amino-2-Deoxy-alpha- D-Glucopyranoside Deacetylase MshB identified by match to protein family HMM PF02585 A0R2I7 No unknown Rv1170 Rv1170 NC_008596.1 Mycobrowser_v3 CDS 5231207 5233090 . - 0 MSMEG_5130 MSMEG_5130 bacterial extracellular solute-binding protein, family protein 5 identified by match to protein family HMM PF00496 A0R2I8 No unknown Rv1166 Rv1166 NC_008596.1 Mycobrowser_v3 CDS 5261949 5262260 . + 0 MSMEG_5160 MSMEG_5160 putative integral membrane protein A0R2L8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5234873 5236774 . - 0 MSMEG_5132 typA GTP-binding protein TypA/BipA identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394 A0R2J0 No unknown Rv1165 Rv1165 NC_008596.1 Mycobrowser_v3 CDS 5236831 5236998 . + 0 MSMEG_5134 MSMEG_5134 hypothetical protein identified by Glimmer2; putative A0R2J2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5237084 5237347 . + 0 MSMEG_5135 MSMEG_5135 hypothetical protein identified by Glimmer2; putative A0R2J3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5237353 5237805 . - 0 MSMEG_5136 MSMEG_5136 helix-turn-helix motif identified by match to protein family HMM PF01243 A0R2J4 No unknown Rv0080 Rv0080 NC_008596.1 Mycobrowser_v3 CDS 5237887 5238618 . - 0 MSMEG_5137 narI respiratory nitrate reductase, gamma subunit identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351 A0R2J5 No unknown Rv1164 Rv1164 NC_008596.1 Mycobrowser_v3 CDS 5238618 5239256 . - 0 MSMEG_5138 narJ nitrate reductase molybdenum cofactor assembly chaperone identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684 A0R2J6 No unknown Rv1163 Rv1163 NC_008596.1 Mycobrowser_v3 CDS 5239253 5240899 . - 0 MSMEG_5139 narH nitrate reductase, beta subunit identified by match to protein family HMM TIGR01660 A0R2J7 No unknown Rv1162 Rv1162 NC_008596.1 Mycobrowser_v3 CDS 5254991 5256124 . - 0 MSMEG_5149 MSMEG_5149 conserved transmembrane protein A0R2K8 No unknown Rv1159 Rv1159 NC_008596.1 Mycobrowser_v3 CDS 5256259 5256948 . + 0 MSMEG_5152 MSMEG_5152 hypothetical protein identified by Glimmer2; putative A0R2K9 No unknown NC_008596.1 Mycobrowser_v3 CDS 882618 884989 . + 0 MSMEG_0797 MSMEG_0797 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5240896 5244570 . - 0 MSMEG_5140 MSMEG_5140 nitrate reductase, alpha subunit identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01580 A0R2J8 No unknown Rv1161 Rv1161 NC_008596.1 Mycobrowser_v3 CDS 5400142 5400870 . - 0 MSMEG_5309 MSMEG_5309 conserved hypothetical protein A0R317 No unknown NC_008596.1 Mycobrowser_v3 CDS 5244596 5245825 . - 0 MSMEG_5141 MSMEG_5141 nitrate/nitrite transporter protein identified by match to protein family HMM PF07690 A0R2J9 No unknown Rv1737c Rv1737c NC_008596.1 Mycobrowser_v3 CDS 5245838 5247265 . - 0 MSMEG_5142 MSMEG_5142 beta-glucosidase A identified by match to protein family HMM PF00232 A0R2K0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5247286 5248347 . - 0 MSMEG_5143 MSMEG_5143 HTH-type transcriptional regulator DegA identified by match to protein family HMM PF00356; match to protein family HMM PF00532 A0R2K1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5248344 5250791 . - 0 MSMEG_5144 MSMEG_5144 xylosidase/arabinosidase identified by match to protein family HMM PF00933; match to protein family HMM PF01915 A0R2K2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5251100 5252485 . + 0 MSMEG_5145 MSMEG_5145 extracellular solute-binding protein, family protein 1 identified by match to protein family HMM PF01547 A0R2K3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5252482 5253402 . + 0 MSMEG_5146 MSMEG_5146 binding protein dependent transport protein identified by match to protein family HMM PF00528 A0R2K4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5253404 5254303 . + 0 MSMEG_5147 MSMEG_5147 sugar ABC-transporter integral membrane protein identified by match to protein family HMM PF00528 A0R2K5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5254309 5254701 . - 0 MSMEG_5148 MSMEG_5148 CTP pyrophosphohydrolase identified by match to protein family HMM PF00293 A0R2K6 No unknown Rv1160 Rv1160 NC_008596.1 Mycobrowser_v3 CDS 5254729 5255013 . + 0 MSMEG_5150 MSMEG_5150 putative pterin-4-alpha-carbinolamine dehydratase identified by match to protein family HMM PF01329 A0R2K7 No unknown Rv1159A Rv1159A NC_008596.1 Mycobrowser_v3 CDS 5256323 5256931 . + 0 MSMEG_5151 MSMEG_5151 conserved hypothetical protein A0R2L0 No unknown Rv1158c Rv1158c NC_008596.1 Mycobrowser_v3 CDS 5256973 5257956 . + 0 MSMEG_5153 MSMEG_5153 conserved hypothetical protein A0R2L1 No unknown Rv1157c Rv1157c NC_008596.1 Mycobrowser_v3 CDS 5258052 5258201 . - 0 MSMEG_5154 MSMEG_5154 conserved hypothetical protein A0R2L2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5793898 5794431 . - 0 MSMEG_5709 MSMEG_5709 conserved hypothetical protein A0R454 No unknown NC_008596.1 Mycobrowser_v3 CDS 5258919 5259500 . - 0 MSMEG_5156 MSMEG_5156 base excision DNA repair protein, HhH-GPD family protein identified by match to protein family HMM PF00730 A0R2L4 No unknown Rv1156 Rv1156 NC_008596.1 Mycobrowser_v3 CDS 5259594 5259890 . + 0 MSMEG_5157 MSMEG_5157 hypothetical protein identified by Glimmer2; putative A0R2L5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5259912 5261111 . + 0 MSMEG_5158 MSMEG_5158 sensor histidine kinase identified by similarity to GB:AAB48182.1; match to protein family HMM PF02518; match to protein family HMM PF06580 A0R2L6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5261108 5261893 . + 0 MSMEG_5159 MSMEG_5159 DNA-binding response regulator, putative identified by match to protein family HMM PF00072; match to protein family HMM PF04397 A0R2L7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5262257 5263999 . + 0 MSMEG_5161 MSMEG_5161 transmembrane transport protein identified by match to protein family HMM PF00474 A0R2L9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5264003 5264395 . - 0 MSMEG_5162 MSMEG_5162 cinnamoyl ester hydrolase identified by match to protein family HMM PF01638 A0R2M0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5264488 5265240 . + 0 MSMEG_5163 MSMEG_5163 ABC proline/glycine betaine family protein transporter, periplasmic ligand binding protein identified by match to protein family HMM PF04069 A0R2M1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5265330 5266328 . + 0 MSMEG_5164 MSMEG_5164 zinc-binding alcohol dehydrogenase family protein identified by match to protein family HMM PF00107; match to protein family HMM TIGR02817 A0R2M2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5266487 5266834 . + 0 MSMEG_5165 MSMEG_5165 integral membrane protein identified by match to protein family HMM PF04341 A0R2M3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5266831 5268462 . + 0 MSMEG_5166 MSMEG_5166 Na+/solute symporter identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813 A0R2M4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5268527 5269732 . + 0 MSMEG_5167 MSMEG_5167 major facilitator superfamily protein MFS_1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0R2M5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5269784 5271097 . + 0 MSMEG_5168 MSMEG_5168 conserved hypothetical protein A0R2M6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5271288 5271731 . - 0 MSMEG_5170 MSMEG_5170 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0R2M8 No unknown Rv1155 Rv1155 NC_008596.1 Mycobrowser_v3 tRNA 6410366 6410438 . - 0 MSMEG_6349 MSMEG_6349 tRNA-Arg No unknown NC_008596.1 Mycobrowser_v3 CDS 5271798 5272811 . + 0 MSMEG_5171 MSMEG_5171 conserved hypothetical protein A0R2M9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5272831 5273346 . + 0 MSMEG_5172 MSMEG_5172 conserved hypothetical protein identified by match to protein family HMM PF08002 A0R2N0 No unknown Rv1154c Rv1154c NC_008596.1 Mycobrowser_v3 CDS 5273370 5274206 . + 0 MSMEG_5173 MSMEG_5173 O-methyltransferase, putative identified by match to protein family HMM PF02409 A0R2N1 No unknown Rv1153c Rv1153c NC_008596.1 Mycobrowser_v3 CDS 5274219 5274575 . - 0 MSMEG_5174 MSMEG_5174 regulatory protein GntR, HTH identified by match to protein family HMM PF00392 A0R2N2 No unknown Rv1152 Rv1152 NC_008596.1 Mycobrowser_v3 CDS 5274659 5275381 . + 0 MSMEG_5175 MSMEG_5175 NAD-dependent deacetylase identified by match to protein family HMM PF02146 A0R2N3 No unknown Rv1151c Rv1151c NC_008596.1 Mycobrowser_v3 CDS 5276022 5276741 . - 0 MSMEG_5177 MSMEG_5177 regulatory protein, TetR identified by match to protein family HMM PF00440 A0R2N5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5276743 5279016 . - 0 MSMEG_5178 MSMEG_5178 integral membrane protein A0R2N6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5279234 5279794 . + 0 MSMEG_5179 MSMEG_5179 DoxX subfamily protein, putative identified by match to protein family HMM PF07681 A0R2N7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5279899 5280030 . + 0 MSMEG_5180 MSMEG_5180 conserved hypothetical protein A0R2N8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5280066 5281532 . - 0 MSMEG_5181 MSMEG_5181 IS1549, transposase identified by similarity to GP:2935133; match to protein family HMM PF01609 A0QNK2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5281804 5282817 . - 0 MSMEG_5182 MSMEG_5182 2-Nitropropane dioxygenase identified by match to protein family HMM PF03060 A0R2P0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5282834 5283595 . - 0 MSMEG_5183 MSMEG_5183 3-Hydroxyacyl-CoA dehydrogenase identified by match to protein family HMM PF00106 A0R2P1 No unknown Rv1144 Rv1144 NC_008596.1 Mycobrowser_v3 CDS 5283647 5284738 . - 0 MSMEG_5184 MSMEG_5184 alpha-methylacyl-CoA racemase, putative identified by match to protein family HMM PF02515 A0R2P2 No unknown Rv1143 Rv1143 NC_008596.1 Mycobrowser_v3 CDS 5284871 5285698 . + 0 MSMEG_5185 MSMEG_5185 enoyl-CoA hydratase PaaB identified by match to protein family HMM PF00378 A0R2P3 No unknown Rv1141c Rv1141c NC_008596.1 Mycobrowser_v3 CDS 5286339 5287598 . + 0 MSMEG_5187 MSMEG_5187 tetracycline-resistance determinant TetV identified by match to protein family HMM PF07690; match to protein family HMM TIGR00900 A0R2P5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5287602 5288285 . - 0 MSMEG_5188 MSMEG_5188 caax amino protease family protein identified by match to protein family HMM PF02517 A0R2P6 No unknown Rv1140 Rv1140 NC_008596.1 Mycobrowser_v3 CDS 5288282 5289418 . - 0 MSMEG_5189 MSMEG_5189 oxidoreductase identified by match to protein family HMM PF01370; match to protein family HMM PF05368 A0R2P7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5289428 5290024 . - 0 MSMEG_5190 MSMEG_5190 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0R2P8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5317578 5318684 . + 0 MSMEG_5223 MSMEG_5223 conserved hypothetical protein A0R2T1 No unknown Rv1111c Rv1111c NC_008596.1 Mycobrowser_v3 CDS 5290103 5291140 . + 0 MSMEG_5192 MSMEG_5192 aldo/keto reductase identified by match to protein family HMM PF00248 A0R2P9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5291112 5291633 . - 0 MSMEG_5191 MSMEG_5191 siderophore binding protein identified by match to protein family HMM PF00132 A0R2Q0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5291664 5292626 . - 0 MSMEG_5193 MSMEG_5193 transcriptional regulator, AraC family protein identified by match to protein family HMM PF00165; match to protein family HMM PF01965 A0R2Q1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5292709 5294022 . + 0 MSMEG_5194 MSMEG_5194 integral membrane protein identified by match to protein family HMM PF07690 A0R2Q2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5294026 5294169 . - 0 MSMEG_5195 MSMEG_5195 hypothetical protein identified by Glimmer2; putative A0R2Q3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5294168 5294923 . + 0 MSMEG_5196 MSMEG_5196 fasciclin domain protein identified by match to protein family HMM PF02469 A0R2Q4 No unknown Rv2873 Rv2873 NC_008596.1 Mycobrowser_v3 CDS 5294997 5296139 . - 0 MSMEG_5197 MSMEG_5197 long-chain specific acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0R2Q5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5296145 5296939 . - 0 MSMEG_5198 MSMEG_5198 carnitinyl-CoA dehydratase identified by match to protein family HMM PF00378 A0R2Q6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5296936 5298093 . - 0 MSMEG_5199 MSMEG_5199 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0R2Q7 No unknown NC_008596.1 Mycobrowser_v3 CDS 925620 926796 . - 0 MSMEG_0841 MSMEG_0841 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5298285 5299076 . + 0 MSMEG_5201 MSMEG_5201 regulatory protein GntR, HTH identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0R2Q8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5299073 5299366 . - 0 MSMEG_5200 MSMEG_5200 hypothetical protein identified by Glimmer2; putative A0R2Q9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5299440 5301194 . - 0 MSMEG_5202 MSMEG_5202 conserved membrane protein A0R2R0 No unknown Rv1132 Rv1132 NC_008596.1 Mycobrowser_v3 CDS 5301228 5301752 . - 0 MSMEG_5203 MSMEG_5203 DoxX subfamily protein, putative identified by match to protein family HMM PF07681 A0R2R1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5301775 5302539 . - 0 MSMEG_5204 MSMEG_5204 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993 A0R2R2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5302564 5303166 . + 0 MSMEG_5206 MSMEG_5206 regulatory protein identified by match to protein family HMM PF00440 A0R2R3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5303163 5304428 . - 0 MSMEG_5205 MSMEG_5205 conserved hypothetical protein A0R2R4 No unknown Rv1125 Rv1125 NC_008596.1 Mycobrowser_v3 CDS 5304455 5305150 . - 0 MSMEG_5207 MSMEG_5207 conserved hypothetical protein A0R2R5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5305147 5305725 . - 0 MSMEG_5208 MSMEG_5208 conserved hypothetical protein A0R2R6 No unknown Rv1972 Rv1972 NC_008596.1 Mycobrowser_v3 CDS 5305945 5306808 . + 0 MSMEG_5209 MSMEG_5209 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0R2R7 No unknown Rv1123c Rv1123c NC_008596.1 Mycobrowser_v3 CDS 5306805 5309738 . + 0 MSMEG_5211 MSMEG_5211 aminotransferase class-III identified by match to protein family HMM PF00202; match to protein family HMM PF01636 A0R2R8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5309722 5310480 . - 0 MSMEG_5210 MSMEG_5210 hydrolase identified by match to protein family HMM PF00561 A0R2R9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5310853 5311533 . + 0 MSMEG_5213 MSMEG_5213 conserved hypothetical protein A0R2S1 No unknown Rv1118c Rv1118c NC_008596.1 Mycobrowser_v3 CDS 5311646 5312170 . + 0 MSMEG_5214 MSMEG_5214 RNA polymerase sigma-70 factor identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0R2S2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5698778 5699224 . + 0 MSMEG_5615 MSMEG_5615 conserved hypothetical protein identified by match to protein family HMM PF06172 A0R3W0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5312196 5312690 . + 0 MSMEG_5215 MSMEG_5215 conserved hypothetical protein identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0R2S3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5312778 5313185 . - 0 MSMEG_5216 MSMEG_5216 glyoxalase family protein identified by match to protein family HMM PF00903 A0R2S4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5313276 5313614 . - 0 MSMEG_5217 MSMEG_5217 hypothetical protein identified by Glimmer2; putative A0R2S5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5314122 5314679 . - 0 MSMEG_5219 MSMEG_5219 riboflavin biosynthesis protein RibD C- domain protein identified by match to protein family HMM PF01872 A0R2S7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5314772 5315719 . - 0 MSMEG_5220 MSMEG_5220 esterase/lipase/thioesterase identified by match to protein family HMM PF07859 A0R2S8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5315767 5316321 . - 0 MSMEG_5221 MSMEG_5221 GCN5-related N-acetyltransferase identified by match to protein family HMM PF00583 A0R2S9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5316318 5317424 . - 0 MSMEG_5222 ychF GTP-binding protein YchF identified by match to protein family HMM PF01926; match to protein family HMM PF06071; match to protein family HMM TIGR00092 A0R2T0 No unknown Rv1112 Rv1112 NC_008596.1 Mycobrowser_v3 CDS 5318699 5319643 . - 0 MSMEG_5224 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase identified by match to protein family HMM PF02401; match to protein family HMM TIGR00216 A0R2T2 No unknown Rv1110 Rv1110 NC_008596.1 Mycobrowser_v3 CDS 5319766 5320383 . + 0 MSMEG_5225 MSMEG_5225 conserved hypothetical protein A0R2T3 No unknown Rv1109c Rv1109c NC_008596.1 Mycobrowser_v3 CDS 5320419 5321633 . + 0 MSMEG_5226 xseA exodeoxyribonuclease VII, large subunit identified by match to protein family HMM PF01336; match to protein family HMM PF02601; match to protein family HMM TIGR00237 A0R2T4 No unknown Rv1108c Rv1108c NC_008596.1 Mycobrowser_v3 CDS 5321630 5321842 . + 0 MSMEG_5227 xseB exodeoxyribonuclease VII, small subunit identified by match to protein family HMM PF02609; match to protein family HMM TIGR01280 A0R2T5 No unknown Rv1107c Rv1107c NC_008596.1 Mycobrowser_v3 CDS 5321905 5322975 . + 0 MSMEG_5228 MSMEG_5228 3-beta hydroxysteroid dehydrogenase/isomerase family protein identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 A0R2T6 No unknown Rv1106c Rv1106c NC_008596.1 Mycobrowser_v3 CDS 5322977 5323501 . - 0 MSMEG_5229 MSMEG_5229 hypothetical protein identified by Glimmer2; putative A0R2T7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5323505 5323840 . - 0 MSMEG_5230 MSMEG_5230 conserved hypothetical protein A0R2T8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5323876 5324085 . - 0 MSMEG_5231 MSMEG_5231 hypothetical protein identified by Glimmer2; putative A0R2T9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5324361 5324507 . - 0 MSMEG_5232 MSMEG_5232 hypothetical protein identified by Glimmer2; putative A0R2U0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5337654 5338643 . - 0 MSMEG_5246 MSMEG_5246 conserved hypothetical protein A0R2V4 No unknown Rv2032 Rv2032 NC_008596.1 Mycobrowser_v3 CDS 5324552 5325631 . + 0 MSMEG_5233 MSMEG_5233 RmlD substrate binding domain superfamily protein identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 A0R2U1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5325628 5326398 . + 0 MSMEG_5234 MSMEG_5234 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R2U2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5326395 5327228 . + 0 MSMEG_5235 MSMEG_5235 short chain dehydrogenase family protein identified by match to protein family HMM PF00106 A0R2U3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5327291 5328478 . + 0 MSMEG_5237 MSMEG_5237 conserved hypothetical protein identified by match to protein family HMM PF01594 A0R2U4 No unknown Rv1101c Rv1101c NC_008596.1 Mycobrowser_v3 CDS 5328456 5329280 . - 0 MSMEG_5236 MSMEG_5236 dienelactone hydrolase family protein identified by match to protein family HMM PF01738 A0R2U5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5329295 5329918 . - 0 MSMEG_5238 MSMEG_5238 conserved hypothetical protein A0R2U6 No unknown Rv1100 Rv1100 NC_008596.1 Mycobrowser_v3 CDS 5329974 5331002 . + 0 MSMEG_5239 glpX fructose-1,6-bisphosphatase, class II identified by match to protein family HMM PF03320; match to protein family HMM TIGR00330 A0R2U7 No unknown Rv1099c Rv1099c NC_008596.1 Mycobrowser_v3 CDS 5331034 5332440 . + 0 MSMEG_5240 MSMEG_5240 fumarate hydratase class II identified by match to protein family HMM PF00206 A0R2U8 No unknown Rv1098c Rv1098c NC_008596.1 Mycobrowser_v3 CDS 5332463 5334178 . - 0 MSMEG_5241 MSMEG_5241 GAF family protein identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730 A0R2U9 No unknown Rv2027c,Rv3132c Rv2027c,Rv3132c NC_008596.1 Mycobrowser_v3 CDS 5334246 5335652 . - 0 MSMEG_5242 MSMEG_5242 acyltransferase, ws/dgat/mgat subfamily protein identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946 A0R2V0 No unknown Rv3130c Rv3130c NC_008596.1 Mycobrowser_v3 CDS 5335649 5336092 . - 0 MSMEG_5243 MSMEG_5243 helix-turn-helix motif A0R2V1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5336164 5336799 . - 0 MSMEG_5244 MSMEG_5244 two component transcriptional regulatory protein devr identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0R2V2 No unknown Rv3133c Rv3133c NC_008596.1 Mycobrowser_v3 CDS 5336810 5337652 . - 0 MSMEG_5245 MSMEG_5245 universal stress protein family protein identified by match to protein family HMM PF00582 A0R2V3 No unknown Rv2028c,Rv3134c Rv2028c,Rv3134c NC_008596.1 Mycobrowser_v3 CDS 5338763 5340076 . - 0 MSMEG_5247 MSMEG_5247 PhoH family protein identified by match to protein family HMM PF02562 A0R2V5 No unknown Rv1095 Rv1095 NC_008596.1 Mycobrowser_v3 CDS 5340381 5341208 . - 0 MSMEG_5248 MSMEG_5248 acyl-[ACP] desaturase identified by match to protein family HMM PF03405 A0R2V6 No unknown Rv1094 Rv1094 NC_008596.1 Mycobrowser_v3 CDS 5341287 5342759 . - 0 MSMEG_5249 glyA serine hydroxymethyltransferase identified by match to protein family HMM PF00464 A0R2V7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5342839 5344104 . - 0 MSMEG_5250 MSMEG_5250 CalR9 protein A0R2V8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5344147 5345085 . + 0 MSMEG_5252 coaA pantothenate kinase identified by match to protein family HMM PF00485; match to protein family HMM TIGR00554 A0R2V9 No unknown Rv1092c Rv1092c NC_008596.1 Mycobrowser_v3 CDS 5345057 5346574 . - 0 MSMEG_5251 MSMEG_5251 hypothetical protein identified by Glimmer2; putative A0R2W0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5346674 5347081 . - 0 MSMEG_5253 MSMEG_5253 conserved hypothetical protein A0R2W1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5347702 5349066 . - 0 MSMEG_5255 MSMEG_5255 conserved hypothetical protein A0R2W3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5349086 5349877 . - 0 MSMEG_5256 uppS undecaprenyl diphosphate synthase identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055 A0R2W4 No unknown Rv1086 Rv1086 NC_008596.1 Mycobrowser_v3 CDS 5349936 5350706 . + 0 MSMEG_5257 MSMEG_5257 channel protein, hemolysin III family protein identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065 A0R2W5 No unknown Rv1085c Rv1085c NC_008596.1 Mycobrowser_v3 CDS 5350825 5351199 . - 0 MSMEG_5258 MSMEG_5258 steroid delta-isomerase identified by match to protein family HMM PF02136 A0R2W6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5351211 5353184 . - 0 MSMEG_5259 MSMEG_5259 conserved hypothetical protein identified by match to protein family HMM PF03190 A0R2W7 No unknown Rv1084 Rv1084 NC_008596.1 Mycobrowser_v3 CDS 5353204 5353482 . - 0 MSMEG_5260 MSMEG_5260 conserved hypothetical protein A0R2W8 No unknown Rv1083 Rv1083 NC_008596.1 Mycobrowser_v3 CDS 5353479 5354345 . - 0 MSMEG_5261 MSMEG_5261 mycothiol conjugate amidase Mca identified by match to protein family HMM PF02585 A0R2W9 No unknown Rv1082 Rv1082 NC_008596.1 Mycobrowser_v3 CDS 5355102 5355596 . + 0 MSMEG_5263 MSMEG_5263 transcription elongation factor GreA identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462 A0R2X1 No unknown Rv1080c Rv1080c NC_008596.1 Mycobrowser_v3 CDS 5355634 5356314 . + 0 MSMEG_5264 MSMEG_5264 conserved hypothetical protein A0R2X2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5356323 5357477 . - 0 MSMEG_5265 MSMEG_5265 putative cystathionine gamma-synthase identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212 A0R2X3 No unknown Rv1079 Rv1079 NC_008596.1 Mycobrowser_v3 CDS 5357517 5358707 . + 0 MSMEG_5267 MSMEG_5267 glutaryl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0R2X4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5358691 5359428 . - 0 MSMEG_5266 MSMEG_5266 RDD family protein identified by match to protein family HMM PF06271 A0R2X5 No unknown Rv1078 Rv1078 NC_008596.1 Mycobrowser_v3 CDS 5359516 5360649 . - 0 MSMEG_5268 MSMEG_5268 conserved hypothetical protein A0R2X6 No unknown Rv2560 Rv2560 NC_008596.1 Mycobrowser_v3 CDS 5360191 5360676 . + 0 MSMEG_5269 MSMEG_5269 hypothetical protein identified by Glimmer2; putative A0R2X7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5390260 5390850 . + 0 MSMEG_5301 MSMEG_5301 transcriptional regulator identified by match to protein family HMM PF00440 A0R309 No unknown NC_008596.1 Mycobrowser_v3 CDS 5360957 5362348 . - 0 MSMEG_5270 MSMEG_5270 cystathionine beta-synthase identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137 A0R2X8 No unknown Rv1077 Rv1077 NC_008596.1 Mycobrowser_v3 CDS 5362378 5363424 . - 0 MSMEG_5271 MSMEG_5271 esterase identified by match to protein family HMM PF07859 A0R2X9 No unknown Rv1076,Rv3487c Rv1076,Rv3487c NC_008596.1 Mycobrowser_v3 CDS 5363628 5364581 . + 0 MSMEG_5272 MSMEG_5272 conserved exported protein identified by match to protein family HMM PF00657 A0R2Y0 No unknown Rv1075c Rv1075c NC_008596.1 Mycobrowser_v3 CDS 5364613 5365830 . + 0 MSMEG_5273 MSMEG_5273 beta-ketoadipyl CoA thiolase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0R2Y1 No unknown Rv1074c Rv1074c NC_008596.1 Mycobrowser_v3 CDS 5365924 5367126 . + 0 MSMEG_5274 purT phosphoribosylglycinamide formyltransferase 2 identified by match to protein family HMM PF02222; match to protein family HMM TIGR01142 A0R2Y2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5367202 5368038 . - 0 MSMEG_5275 MSMEG_5275 permease of the major facilitator superfamily protein identified by match to protein family HMM PF06539 A0R2Y3 No unknown Rv1072 Rv1072 NC_008596.1 Mycobrowser_v3 CDS 5368214 5369260 . + 0 MSMEG_5276 MSMEG_5276 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R2Y4 No unknown Rv1071c Rv1071c NC_008596.1 Mycobrowser_v3 CDS 5369260 5370036 . + 0 MSMEG_5277 MSMEG_5277 probable enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R2Y5 No unknown Rv1070c Rv1070c NC_008596.1 Mycobrowser_v3 CDS 5400867 5401676 . - 0 MSMEG_5310 MSMEG_5310 SAM-dependent methyltransferase A0R318 No unknown Rv2622 Rv2622 NC_008596.1 Mycobrowser_v3 CDS 5370047 5371777 . + 0 MSMEG_5278 MSMEG_5278 conserved membrane-spanning protein A0R2Y6 No unknown Rv1069c Rv1069c NC_008596.1 Mycobrowser_v3 CDS 5371788 5372156 . - 0 MSMEG_5279 MSMEG_5279 conserved hypothetical protein A0R2Y7 No unknown Rv1066 Rv1066 NC_008596.1 Mycobrowser_v3 CDS 5372158 5372706 . - 0 MSMEG_5280 MSMEG_5280 cysteine dioxygenase type I superfamily protein identified by match to protein family HMM PF05995 A0R2Y8 No unknown Rv1065 Rv1065 NC_008596.1 Mycobrowser_v3 CDS 5372831 5373301 . + 0 MSMEG_5281 MSMEG_5281 LpqV protein A0R2Y9 No unknown Rv1064c Rv1064c NC_008596.1 Mycobrowser_v3 CDS 5373318 5373962 . - 0 MSMEG_5282 MSMEG_5282 transcriptional regulator identified by match to protein family HMM PF00440 A0R2Z0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5389451 5390179 . - 0 MSMEG_5300 MSMEG_5300 short-chain type dehydrogenase/reductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R308 No unknown NC_008596.1 Mycobrowser_v3 CDS 5374065 5375750 . + 0 MSMEG_5283 MSMEG_5283 hydrolase, CocE/NonD family protein identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976 A0R2Z1 No unknown Rv1215c Rv1215c NC_008596.1 Mycobrowser_v3 CDS 5375747 5376769 . + 0 MSMEG_5284 MSMEG_5284 patatin identified by match to protein family HMM PF01734 A0R2Z2 No unknown Rv1063c Rv1063c NC_008596.1 Mycobrowser_v3 CDS 5376770 5377642 . - 0 MSMEG_5285 MSMEG_5285 phospholipase, patatin family protein identified by match to protein family HMM PF01734 A0R2Z3 No unknown Rv1062 Rv1062 NC_008596.1 Mycobrowser_v3 CDS 5377718 5378761 . + 0 MSMEG_5287 MSMEG_5287 dehydrogenase identified by match to protein family HMM PF00107 A0R2Z4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5378758 5379807 . - 0 MSMEG_5286 dapB dihydrodipicolinate reductase, N-terminus domain protein identified by match to protein family HMM PF01113 A0R2Z5 No unknown Rv1059 Rv1059 NC_008596.1 Mycobrowser_v3 CDS 5412499 5413248 . - 0 MSMEG_5324 MSMEG_5324 conserved hypothetical protein A0R332 No unknown NC_008596.1 Mycobrowser_v3 CDS 5379874 5382042 . - 0 MSMEG_5288 MSMEG_5288 putative serine/threonine protein kinase identified by match to protein family HMM PF00376 A0R2Z6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5382010 5382222 . + 0 MSMEG_5289 MSMEG_5289 hypothetical protein identified by Glimmer2; putative A0R2Z7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5382453 5382716 . + 0 MSMEG_5290 MSMEG_5290 hypothetical protein identified by Glimmer2; putative A0R2Z8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5382807 5384423 . - 0 MSMEG_5291 MSMEG_5291 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R2Z9 No unknown Rv1058 Rv1058 NC_008596.1 Mycobrowser_v3 CDS 5384572 5384877 . + 0 MSMEG_5292 MSMEG_5292 hypothetical protein identified by Glimmer2; putative A0R300 No unknown NC_008596.1 Mycobrowser_v3 CDS 5384778 5384888 . + 0 MSMEG_5293 MSMEG_5293 hypothetical protein identified by Glimmer2; putative A0R301 No unknown NC_008596.1 Mycobrowser_v3 CDS 5385285 5386811 . - 0 MSMEG_5295 MSMEG_5295 peroxisomal-coenzyme A synthetase identified by match to protein family HMM PF00501 A0R303 No unknown Rv0119 Rv0119 NC_008596.1 Mycobrowser_v3 CDS 5386813 5386935 . - 0 MSMEG_5296 MSMEG_5296 hypothetical protein identified by Glimmer2; putative A0R304 No unknown NC_008596.1 Mycobrowser_v3 CDS 5386954 5388684 . + 0 MSMEG_5297 MSMEG_5297 oxalyl-CoA decarboxylase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 A0R305 No unknown Rv0118c Rv0118c NC_008596.1 Mycobrowser_v3 CDS 5388829 5389104 . + 0 MSMEG_5299 MSMEG_5299 hypothetical protein identified by Glimmer2; putative A0R306 No unknown NC_008596.1 Mycobrowser_v3 CDS 5390951 5392324 . - 0 MSMEG_5302 MSMEG_5302 aerobic C4-dicarboxylate transport protein identified by match to protein family HMM PF00375 A0R310 No unknown Rv2443 Rv2443 NC_008596.1 Mycobrowser_v3 CDS 5392572 5394098 . + 0 MSMEG_5303 putP sodium/proline symporter identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; match to protein family HMM TIGR02121 A0R311 No unknown NC_008596.1 Mycobrowser_v3 CDS 5394189 5395772 . + 0 MSMEG_5304 MSMEG_5304 two-component sensor kinase identified by match to protein family HMM PF02518 A0R312 No unknown NC_008596.1 Mycobrowser_v3 CDS 5395769 5396461 . + 0 MSMEG_5306 MSMEG_5306 two-component system response regulator identified by match to protein family HMM PF00072 A0R313 No unknown NC_008596.1 Mycobrowser_v3 CDS 5396446 5397849 . - 0 MSMEG_5305 MSMEG_5305 choline dehydrogenase identified by match to protein family HMM PF00732; match to protein family HMM PF05199 A0R314 No unknown NC_008596.1 Mycobrowser_v3 CDS 5397936 5398649 . + 0 MSMEG_5307 MSMEG_5307 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0R315 No unknown NC_008596.1 Mycobrowser_v3 CDS 5398656 5399762 . - 0 MSMEG_5308 MSMEG_5308 conserved hypothetical protein A0R316 No unknown NC_008596.1 Mycobrowser_v3 CDS 5401673 5402452 . - 0 MSMEG_5311 MSMEG_5311 conserved hypothetical protein A0R319 No unknown NC_008596.1 Mycobrowser_v3 CDS 5402449 5403156 . - 0 MSMEG_5312 MSMEG_5312 ABC-type multidrug transport system ATPase component identified by match to protein family HMM PF00005 A0R320 No unknown NC_008596.1 Mycobrowser_v3 CDS 5403153 5403605 . - 0 MSMEG_5313 MSMEG_5313 hypothetical protein identified by Glimmer2; putative A0R321 No unknown NC_008596.1 Mycobrowser_v3 CDS 5403732 5404646 . - 0 MSMEG_5314 MSMEG_5314 conserved hypothetical protein A0R322 No unknown Rv3555c Rv3555c NC_008596.1 Mycobrowser_v3 CDS 5404783 5405610 . - 0 MSMEG_5315 MSMEG_5315 gp35 protein identified by match to protein family HMM PF01471; match to protein family HMM PF01510 A0R323 No unknown Rv3594 Rv3594 NC_008596.1 Mycobrowser_v3 CDS 5405691 5406437 . + 0 MSMEG_5317 MSMEG_5317 conserved hypothetical protein A0R324 No unknown Rv0314c Rv0314c NC_008596.1 Mycobrowser_v3 CDS 5406434 5407207 . - 0 MSMEG_5316 MSMEG_5316 glutamine ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0R325 No unknown NC_008596.1 Mycobrowser_v3 CDS 5407204 5408610 . - 0 MSMEG_5318 MSMEG_5318 glutamine ABC transporter, permease/substrate-binding protein identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726 A0R326 No unknown NC_008596.1 Mycobrowser_v3 CDS 5408767 5409213 . - 0 MSMEG_5319 MSMEG_5319 alkylhydroperoxidase AhpD core identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778 A0R327 No unknown NC_008596.1 Mycobrowser_v3 CDS 5409212 5409379 . + 0 MSMEG_5320 MSMEG_5320 hypothetical protein identified by Glimmer2; putative A0R328 No unknown NC_008596.1 Mycobrowser_v3 CDS 5409376 5409696 . + 0 MSMEG_5321 MSMEG_5321 hypothetical protein identified by Glimmer2; putative A0R329 No unknown NC_008596.1 Mycobrowser_v3 CDS 5409749 5411089 . - 0 MSMEG_5322 MSMEG_5322 hypothetical protein identified by Glimmer2; putative A0R330 No unknown NC_008596.1 Mycobrowser_v3 CDS 5411574 5412371 . - 0 MSMEG_5323 MSMEG_5323 conserved hypothetical protein A0R331 No unknown NC_008596.1 Mycobrowser_v3 CDS 5414886 5415626 . - 0 MSMEG_5329 MSMEG_5329 conserved hypothetical protein identified by match to protein family HMM PF01169 A0R337 No unknown Rv3848 Rv3848 NC_008596.1 Mycobrowser_v3 CDS 5415960 5416961 . - 0 MSMEG_5330 MSMEG_5330 SIS domain protein identified by match to protein family HMM PF01380 A0R338 No unknown NC_008596.1 Mycobrowser_v3 CDS 5419476 5420084 . - 0 MSMEG_5332 MSMEG_5332 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R339 No unknown NC_008596.1 Mycobrowser_v3 CDS 5420232 5420573 . + 0 MSMEG_5333 MSMEG_5333 hypothetical protein identified by Glimmer2; putative A0R340 No unknown NC_008596.1 Mycobrowser_v3 CDS 5420674 5421282 . - 0 MSMEG_5334 MSMEG_5334 conserved hypothetical protein A0R341 No unknown NC_008596.1 Mycobrowser_v3 CDS 5421419 5422666 . - 0 MSMEG_5335 MSMEG_5335 formamidase identified by match to protein family HMM PF03069 A0R342 No unknown NC_008596.1 Mycobrowser_v3 CDS 5422683 5423324 . - 0 MSMEG_5336 MSMEG_5336 amidate substrates transporter protein identified by match to protein family HMM PF02293 A0R343 No unknown NC_008596.1 Mycobrowser_v3 CDS 5423695 5424123 . - 0 MSMEG_5338 MSMEG_5338 regulatory protein, MarR identified by match to protein family HMM PF01047 A0R344 No unknown NC_008596.1 Mycobrowser_v3 CDS 5424226 5425299 . + 0 MSMEG_5339 MSMEG_5339 nitrile hydratase regulator1 A0R345 No unknown NC_008596.1 Mycobrowser_v3 CDS 5425307 5425912 . - 0 MSMEG_5340 MSMEG_5340 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0R346 No unknown Rv1556 Rv1556 NC_008596.1 Mycobrowser_v3 CDS 5426007 5427203 . + 0 MSMEG_5341 MSMEG_5341 dipeptidyl aminopeptidase/acylaminoacyl peptidase identified by match to protein family HMM PF00561 A0R347 No unknown NC_008596.1 Mycobrowser_v3 CDS 5427211 5427540 . - 0 MSMEG_5342 MSMEG_5342 conserved hypothetical protein A0R348 No unknown NC_008596.1 Mycobrowser_v3 CDS 5427543 5427890 . - 0 MSMEG_5343 MSMEG_5343 conserved hypothetical protein A0R349 No unknown NC_008596.1 Mycobrowser_v3 CDS 5427953 5428183 . - 0 MSMEG_5344 MSMEG_5344 hypothetical protein identified by Glimmer2; putative A0R350 No unknown NC_008596.1 Mycobrowser_v3 CDS 5428272 5429072 . + 0 MSMEG_5345 MSMEG_5345 glycosyl hydrolases family protein 16 identified by match to protein family HMM PF00722 A0R351 No unknown NC_008596.1 Mycobrowser_v3 CDS 5429236 5429868 . - 0 MSMEG_5346 MSMEG_5346 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0R352 No unknown NC_008596.1 Mycobrowser_v3 CDS 5430067 5431389 . + 0 MSMEG_5347 MSMEG_5347 transporter, major facilitator family protein identified by match to protein family HMM PF07690 A0R353 No unknown NC_008596.1 Mycobrowser_v3 CDS 5431409 5433004 . + 0 MSMEG_5348 MSMEG_5348 medium-chain fatty acid-CoA ligase identified by match to protein family HMM PF00501 A0R354 No unknown NC_008596.1 Mycobrowser_v3 CDS 5433042 5433650 . + 0 MSMEG_5349 MSMEG_5349 conserved hypothetical protein, putative identified by match to protein family HMM TIGR03083 A0R355 No unknown NC_008596.1 Mycobrowser_v3 CDS 5433830 5435251 . - 0 MSMEG_5350 MSMEG_5350 PPE family protein, putative A0R356 No unknown NC_008596.1 Mycobrowser_v3 CDS 5435376 5435558 . - 0 MSMEG_5351 MSMEG_5351 hypothetical protein identified by Glimmer2; putative A0R357 No unknown NC_008596.1 Mycobrowser_v3 CDS 5435666 5435977 . + 0 MSMEG_5352 MSMEG_5352 conserved hypothetical protein A0R358 No unknown NC_008596.1 Mycobrowser_v3 CDS 5435982 5436746 . - 0 MSMEG_5353 MSMEG_5353 putative methyltransferase A0R359 No unknown NC_008596.1 Mycobrowser_v3 CDS 5466991 5467392 . + 0 MSMEG_5390 MSMEG_5390 conserved hypothetical protein identified by match to protein family HMM PF03625 A0R392 No unknown NC_008596.1 Mycobrowser_v3 CDS 5436911 5437936 . + 0 MSMEG_5354 MSMEG_5354 O-methyltransferase, family protein 2 identified by match to protein family HMM PF00891 A0R360 No unknown NC_008596.1 Mycobrowser_v3 CDS 5437985 5438560 . - 0 MSMEG_5355 MSMEG_5355 hypothetical protein identified by Glimmer2; putative A0R361 No unknown NC_008596.1 Mycobrowser_v3 CDS 5438797 5439021 . - 0 MSMEG_5356 MSMEG_5356 hypothetical protein identified by Glimmer2; putative A0R362 No unknown NC_008596.1 Mycobrowser_v3 CDS 5439081 5439218 . + 0 MSMEG_5357 MSMEG_5357 conserved hypothetical protein A0R363 No unknown NC_008596.1 Mycobrowser_v3 CDS 5439246 5440604 . - 0 MSMEG_5358 MSMEG_5358 acetamidase/Formamidase family protein identified by match to protein family HMM PF03069; match to protein family HMM TIGR01409 A0R364 No unknown NC_008596.1 Mycobrowser_v3 CDS 5440718 5441167 . - 0 MSMEG_5359 cynS cyanate hydratase identified by match to protein family HMM PF02560; match to protein family HMM TIGR00673 A0R365 No unknown NC_008596.1 Mycobrowser_v3 CDS 5441164 5442024 . - 0 MSMEG_5360 MSMEG_5360 formate/nitrate transporter identified by match to protein family HMM PF01226 A0R366 No unknown NC_008596.1 Mycobrowser_v3 CDS 5442132 5442812 . - 0 MSMEG_5361 MSMEG_5361 hypothetical protein identified by Glimmer2; putative A0R367 No unknown NC_008596.1 Mycobrowser_v3 CDS 5442231 5442995 . + 0 MSMEG_5362 MSMEG_5362 hypothetical protein identified by Glimmer2; putative A0R368 No unknown NC_008596.1 Mycobrowser_v3 CDS 5442992 5443366 . + 0 MSMEG_5363 MSMEG_5363 hypothetical protein identified by Glimmer2; putative A0R369 No unknown NC_008596.1 Mycobrowser_v3 CDS 5799304 5799669 . + 0 MSMEG_5716 MSMEG_5716 hypothetical protein identified by Glimmer2; putative A0R460 No unknown NC_008596.1 Mycobrowser_v3 CDS 5443516 5444469 . - 0 MSMEG_5364 MSMEG_5364 amidohydrolase 2 identified by match to protein family HMM PF04909 A0R370 No unknown NC_008596.1 Mycobrowser_v3 CDS 5444594 5444881 . - 0 MSMEG_5365 MSMEG_5365 RNA polymerase sigma-70 factor A0R371 No unknown NC_008596.1 Mycobrowser_v3 CDS 5446146 5447081 . + 0 MSMEG_5368 ehuB ectoine/hydroxyectoine ABC transporter solute-binding protein identified by match to protein family HMM PF00497; match to protein family HMM TIGR02995 A0R373 No unknown NC_008596.1 Mycobrowser_v3 CDS 5447086 5447784 . + 0 MSMEG_5369 ehuC ectoine/hydroxyectoine ABC transporter, permease protein EhuC identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03004 A0R374 No unknown NC_008596.1 Mycobrowser_v3 CDS 5447781 5448449 . + 0 MSMEG_5370 ehuD ectoine/hydroxyectoine ABC transporter, permease protein EhuD identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; match to protein family HMM TIGR03003 A0R375 No unknown NC_008596.1 Mycobrowser_v3 CDS 5448466 5449230 . + 0 MSMEG_5371 ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM TIGR03005 A0R376 No unknown NC_008596.1 Mycobrowser_v3 CDS 5465768 5466640 . + 0 MSMEG_5387 MSMEG_5387 conserved hypothetical protein identified by match to protein family HMM PF01925 A0R390 No unknown NC_008596.1 Mycobrowser_v3 CDS 5449234 5451729 . - 0 MSMEG_5372 MSMEG_5372 sensor protein KdpD identified by match to protein family HMM PF00512; match to protein family HMM PF00582; match to protein family HMM PF02518; match to protein family HMM PF02702 A0R377 No unknown NC_008596.1 Mycobrowser_v3 CDS 5451846 5452871 . - 0 MSMEG_5373 MSMEG_5373 nitrilase 2 identified by match to protein family HMM PF00795 A0R378 No unknown NC_008596.1 Mycobrowser_v3 CDS 5452917 5454350 . - 0 MSMEG_5374 MSMEG_5374 glutamate--ammonia ligase identified by match to protein family HMM PF00120 A0R379 No unknown NC_008596.1 Mycobrowser_v3 CDS 5454493 5455191 . - 0 MSMEG_5375 MSMEG_5375 GntR-family protein transcriptional regulator identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0R380 No unknown NC_008596.1 Mycobrowser_v3 CDS 5455289 5455684 . - 0 MSMEG_5376 MSMEG_5376 conserved hypothetical protein identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0R381 No unknown NC_008596.1 Mycobrowser_v3 CDS 5456127 5456711 . - 0 MSMEG_5377 MSMEG_5377 hypothetical protein identified by Glimmer2; putative A0R382 No unknown NC_008596.1 Mycobrowser_v3 CDS 5487967 5488752 . + 0 MSMEG_5408 lgt prolipoprotein diacylglyceryl transferase identified by match to protein family HMM PF01790 A0R3B1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5456430 5457752 . + 0 MSMEG_5378 MSMEG_5378 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5457760 5458461 . - 0 MSMEG_5379 MSMEG_5379 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5461316 5462167 . - 0 MSMEG_5381 MSMEG_5381 hypothetical protein identified by Glimmer2; putative A0R385 No unknown NC_008596.1 Mycobrowser_v3 CDS 5794807 5795331 . - 0 MSMEG_5710 MSMEG_5710 hypothetical protein identified by Glimmer2; putative A0R455 No unknown NC_008596.1 Mycobrowser_v3 CDS 5462776 5463546 . - 0 MSMEG_5383 MSMEG_5383 dehydrogenase/reductase SDR family protein member 4 identified by match to protein family HMM PF00106 A0R386 No unknown NC_008596.1 Mycobrowser_v3 CDS 5463546 5463671 . - 0 MSMEG_5384 MSMEG_5384 hypothetical protein identified by Glimmer2; putative A0R387 No unknown NC_008596.1 Mycobrowser_v3 tRNA 5458911 5458984 . - 0 MSMEG_5380 MSMEG_5380 tRNA-Leu No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 5463644 5465023 . - 0 MSMEG_5385 MSMEG_5385 metallo-beta-lactamase family protein identified by match to protein family HMM PF00581; match to protein family HMM PF00753 A0R388 No unknown NC_008596.1 Mycobrowser_v3 CDS 5465174 5465761 . + 0 MSMEG_5386 MSMEG_5386 rhodanese-like domain protein identified by match to protein family HMM PF00581 A0R389 No unknown NC_008596.1 Mycobrowser_v3 CDS 5466725 5466973 . + 0 MSMEG_5388 MSMEG_5388 conserved hypothetical protein identified by match to protein family HMM PF02583 A0R391 No unknown Rv1766 Rv1766 NC_008596.1 Mycobrowser_v3 CDS 5467389 5468102 . - 0 MSMEG_5389 MSMEG_5389 LysA protein A0R393 No unknown NC_008596.1 Mycobrowser_v3 CDS 5468304 5468513 . + 0 MSMEG_5391 MSMEG_5391 hypothetical protein identified by Glimmer2; putative A0R394 No unknown NC_008596.1 Mycobrowser_v3 CDS 5468513 5470183 . + 0 MSMEG_5392 kdpA K+-transporting ATPase, A subunit identified by match to protein family HMM PF03814; match to protein family HMM TIGR00680 A0R395 No unknown Rv1029 Rv1029 NC_008596.1 Mycobrowser_v3 CDS 5470183 5472330 . + 0 MSMEG_5393 kdpB K+-transporting ATPase, B subunit identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01497 A0R396 No unknown Rv1030 Rv1030 NC_008596.1 Mycobrowser_v3 CDS 5472332 5473198 . + 0 MSMEG_5394 MSMEG_5394 potassium-transporting ATPase C chain identified by match to protein family HMM PF02669 A0R397 No unknown Rv1031 Rv1031 NC_008596.1 Mycobrowser_v3 CDS 5489073 5489366 . + 0 MSMEG_5409 MSMEG_5409 conserved hypothetical protein A0R3B2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5473206 5475725 . + 0 MSMEG_5395 MSMEG_5395 sensor protein KdpD identified by match to protein family HMM PF00512; match to protein family HMM PF00582; match to protein family HMM PF02518; match to protein family HMM PF02702 A0R398 No unknown Rv1028c Rv1028c NC_008596.1 Mycobrowser_v3 CDS 5475722 5476414 . + 0 MSMEG_5396 MSMEG_5396 KDP operon transcriptional regulatory protein KdpE identified by match to protein family HMM PF00072; match to protein family HMM PF00486 A0R399 No unknown Rv1027c Rv1027c NC_008596.1 Mycobrowser_v3 CDS 5476470 5477615 . - 0 MSMEG_5397 recQ ATP-dependent DNA helicase RecQ identified by match to protein family HMM PF00271 A0R3A0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5477639 5479006 . - 0 MSMEG_5398 MSMEG_5398 ISMsm4, transposase identified by similarity to GP:150005; match to protein family HMM PF01610 A0R3A1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5479025 5479549 . - 0 MSMEG_5399 MSMEG_5399 ATP-dependent DNA helicase RecQ identified by match to protein family HMM PF00270 A0R3A2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5479546 5481138 . - 0 MSMEG_5400 MSMEG_5400 dehydrogenase identified by match to protein family HMM PF01266; match to protein family HMM PF01593 A0R3A3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5481135 5481614 . - 0 MSMEG_5401 MSMEG_5401 conserved hypothetical protein A0R3A4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5481632 5482420 . - 0 MSMEG_5402 MSMEG_5402 dehydrogenase DhgA identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R3A5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5482552 5484423 . + 0 MSMEG_5404 MSMEG_5404 propionate--CoA ligase identified by match to protein family HMM PF00501 A0R3A6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5484398 5486341 . - 0 MSMEG_5403 cadA cadmium-translocating P-type ATPase identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525 A0R3A7 No unknown Rv1469 Rv1469 NC_008596.1 Mycobrowser_v3 CDS 5486438 5486791 . + 0 MSMEG_5405 MSMEG_5405 transcriptional regulator, ArsR family protein identified by match to protein family HMM PF01022 A0R3A8 No unknown Rv3744 Rv3744 NC_008596.1 Mycobrowser_v3 CDS 5487002 5487118 . + 0 MSMEG_5406 MSMEG_5406 hypothetical protein identified by Glimmer2; putative A0R3A9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5487241 5487942 . + 0 MSMEG_5407 MSMEG_5407 integral membrane protein A0R3B0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5489368 5490936 . + 0 MSMEG_5410 MSMEG_5410 radical SAM domain protein identified by match to protein family HMM PF04055 A0R3B3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5490933 5491193 . + 0 MSMEG_5411 MSMEG_5411 conserved hypothetical protein A0R3B4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5491336 5492376 . + 0 MSMEG_5412 MSMEG_5412 immunogenic protein MPT63 A0R3B5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5492439 5493389 . - 0 MSMEG_5413 MSMEG_5413 exopolyphosphatase identified by match to protein family HMM PF02541 A0R3B6 No unknown Rv1026 Rv1026 NC_008596.1 Mycobrowser_v3 CDS 5493380 5494549 . - 0 MSMEG_5414 MSMEG_5414 septum formation initiator subfamily protein, putative identified by match to protein family HMM PF04417; match to protein family HMM PF04977 A0R3B7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5494583 5495866 . - 0 MSMEG_5415 eno enolase identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060 A0R3B8 No unknown Rv1023 Rv1023 NC_008596.1 Mycobrowser_v3 CDS 5495931 5496605 . - 0 MSMEG_5416 MSMEG_5416 LpqU protein A0R3B9 No unknown Rv1022 Rv1022 NC_008596.1 Mycobrowser_v3 CDS 5496611 5496763 . + 0 MSMEG_5417 MSMEG_5417 hypothetical protein identified by Glimmer2; putative A0R3C0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5543529 5543693 . - 0 MSMEG_5459 MSMEG_5459 hypothetical protein identified by Glimmer2; putative A0R3G0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5496846 5497778 . + 0 MSMEG_5418 MSMEG_5418 iron permease FTR1 identified by match to protein family HMM PF03239 A0R3C1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5498980 5500266 . + 0 MSMEG_5420 MSMEG_5420 Tat-translocated enzyme identified by match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01412; match to protein family HMM TIGR01413 A0R3C2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5501007 5503937 . + 0 MSMEG_5421 MSMEG_5421 hypothetical protein identified by Glimmer2; putative A0R3C3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5504059 5505033 . - 0 MSMEG_5422 MSMEG_5422 transcriptional regulator, MazG family protein identified by match to protein family HMM PF03819 A0R3C4 No unknown Rv1021 Rv1021 NC_008596.1 Mycobrowser_v3 CDS 5530749 5531585 . - 0 MSMEG_5445 MSMEG_5445 conserved hypothetical protein identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096 A0R3E7 No unknown Rv1003 Rv1003 NC_008596.1 Mycobrowser_v3 CDS 5505030 5508677 . - 0 MSMEG_5423 mfd transcription-repair coupling factor identified by similarity to SP:P37474; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM TIGR00580 A0R3C5 No unknown Rv1020 Rv1020 NC_008596.1 Mycobrowser_v3 CDS 5536711 5537388 . - 0 MSMEG_5452 MSMEG_5452 conserved hypothetical protein A0R3F3 No unknown Rv0999 Rv0999 NC_008596.1 Mycobrowser_v3 CDS 5508726 5509340 . - 0 MSMEG_5424 MSMEG_5424 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R3C6 No unknown Rv1019 Rv1019 NC_008596.1 Mycobrowser_v3 CDS 5509565 5511013 . + 0 MSMEG_5426 glmU UDP-N-acetylglucosamine pyrophosphorylase identified by match to protein family HMM PF00483; match to protein family HMM TIGR01173 A0R3C7 No unknown Rv1018c Rv1018c NC_008596.1 Mycobrowser_v3 CDS 5511115 5512095 . + 0 MSMEG_5427 MSMEG_5427 ribose-phosphate pyrophosphokinase identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251 A0R3C8 No unknown Rv1017c Rv1017c NC_008596.1 Mycobrowser_v3 CDS 5512096 5512443 . + 0 MSMEG_5428 arsC arsenate reductase identified by match to protein family HMM PF03960; match to protein family HMM TIGR00014 A0R3C9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5512458 5513096 . + 0 MSMEG_5429 MSMEG_5429 LpqT protein A0R3D0 No unknown Rv1016c Rv1016c NC_008596.1 Mycobrowser_v3 CDS 5513126 5513998 . + 0 MSMEG_5430 MSMEG_5430 retinol dehydrogenase 13 identified by match to protein family HMM PF00106 A0R3D1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5514158 5514805 . + 0 MSMEG_5431 MSMEG_5431 ribosomal protein L25, Ctc-form identified by match to protein family HMM PF01386; match to protein family HMM TIGR00731 A0R3D2 No unknown Rv1015c Rv1015c NC_008596.1 Mycobrowser_v3 CDS 5514818 5515393 . + 0 MSMEG_5432 pth peptidyl-tRNA hydrolase identified by match to protein family HMM PF01195; match to protein family HMM TIGR00447 A0R3D3 No unknown Rv1014c Rv1014c NC_008596.1 Mycobrowser_v3 CDS 5515581 5516618 . - 0 MSMEG_5433 MSMEG_5433 4Fe-4S binding domain protein identified by match to protein family HMM PF00037 A0R3D4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5516811 5517245 . + 0 MSMEG_5434 MSMEG_5434 hypothetical protein identified by Glimmer2; putative A0R3D5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5517344 5518981 . - 0 MSMEG_5435 MSMEG_5435 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R3D6 No unknown Rv1013 Rv1013 NC_008596.1 Mycobrowser_v3 CDS 5519402 5520370 . - 0 MSMEG_5436 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase identified by match to protein family HMM PF00288; match to protein family HMM TIGR00154 A0R3D7 No unknown Rv1011 Rv1011 NC_008596.1 Mycobrowser_v3 CDS 5520425 5521288 . + 0 MSMEG_5437 MSMEG_5437 probable serine/threonine-protein kinase PknB identified by match to protein family HMM PF00069; match to protein family HMM PF01163 A0R3D8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5521390 5522283 . - 0 MSMEG_5438 ksgA dimethyladenosine transferase identified by similarity to SP:P37468; match to protein family HMM PF00398; match to protein family HMM TIGR00755 A0R3D9 No unknown Rv1010 Rv1010 NC_008596.1 Mycobrowser_v3 CDS 5537418 5538080 . - 0 MSMEG_5453 MSMEG_5453 conserved hypothetical protein A0R3F4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1035963 1036867 . + 0 MSMEG_0961 MSMEG_0961 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5522319 5523446 . - 0 MSMEG_5439 MSMEG_5439 resuscitation-promoting factor RpfB identified by match to protein family HMM PF03990; match to protein family HMM PF06737; match to protein family HMM PF07501 A0R3E0 No unknown Rv1009 Rv1009 NC_008596.1 Mycobrowser_v3 CDS 5523539 5524393 . - 0 MSMEG_5440 MSMEG_5440 deoxyribonuclease identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010 A0R3E1 No unknown Rv1008 Rv1008 NC_008596.1 Mycobrowser_v3 CDS 5524418 5525965 . + 0 MSMEG_5441 metG methionyl-tRNA synthetase identified by match to protein family HMM TIGR00398 A0R3E2 No unknown Rv1007c Rv1007c NC_008596.1 Mycobrowser_v3 CDS 5525967 5527316 . + 0 MSMEG_5442 MSMEG_5442 glutamate dehydrogenase identified by match to protein family HMM PF00208; match to protein family HMM PF02812 A0R3E3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5543717 5544271 . - 0 MSMEG_5460 MSMEG_5460 conserved hypothetical protein A0R3G1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5527410 5528603 . + 0 MSMEG_5443 MSMEG_5443 dehydrogenase identified by match to protein family HMM PF00070; match to protein family HMM PF07992 A0R3E4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5528600 5529505 . + 0 MSMEG_5444 MSMEG_5444 RNA polymerase sigma-70 factor, TIGR02957 family protein identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; match to protein family HMM TIGR02957 A0R3E5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5529526 5530779 . + 0 MSMEG_5446 pabB para-aminobenzoate synthase, component I identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553 A0R3E6 No unknown Rv1005c Rv1005c NC_008596.1 Mycobrowser_v3 CDS 5590070 5590582 . - 0 MSMEG_5506 MSMEG_5506 hypothetical protein identified by Glimmer2; putative A0R3K6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5531610 5533160 . + 0 MSMEG_5447 MSMEG_5447 dolichyl-phosphate-mannose-protein mannosyltransferase identified by match to protein family HMM PF02366 A0R3E8 No unknown Rv1002c Rv1002c NC_008596.1 Mycobrowser_v3 CDS 5533473 5534486 . + 0 MSMEG_5449 MSMEG_5449 conserved hypothetical protein A0R3E9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5534381 5535589 . - 0 MSMEG_5448 arcA arginine deiminase identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078 A0R3F0 No unknown Rv1001 Rv1001 NC_008596.1 Mycobrowser_v3 CDS 5535642 5536067 . + 0 MSMEG_5450 soxR redox-sensitive transcriptional activator SoxR identified by similarity to SP:P22538; match to protein family HMM PF00376; match to protein family HMM TIGR01950 A0R3F1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5536101 5536697 . + 0 MSMEG_5451 MSMEG_5451 alkylated DNA repair protein A0R3F2 No unknown Rv1000c Rv1000c NC_008596.1 Mycobrowser_v3 CDS 5538195 5539166 . + 0 MSMEG_5454 MSMEG_5454 choloylglycine hydrolase, putative identified by match to protein family HMM PF02275 A0R3F5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5539167 5540630 . - 0 MSMEG_5455 MSMEG_5455 pe family protein A0R3F6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5540925 5541641 . + 0 MSMEG_5456 MSMEG_5456 MK35 lipoprotein A0R3F7 No unknown Rv0583c Rv0583c NC_008596.1 Mycobrowser_v3 CDS 5541650 5542498 . - 0 MSMEG_5457 MSMEG_5457 shikimate 5-dehydrogenase identified by match to protein family HMM PF01488 A0R3F8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5542495 5543496 . - 0 MSMEG_5458 MSMEG_5458 cyclic nucleotide-binding protein identified by match to protein family HMM PF00027 A0R3F9 No unknown Rv0998 Rv0998 NC_008596.1 Mycobrowser_v3 CDS 5545249 5546187 . + 0 MSMEG_5462 rarD RarD protein identified by match to protein family HMM TIGR00688 A0R3G3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5546238 5547116 . + 0 MSMEG_5463 MSMEG_5463 6-phosphogluconate dehydrogenase, NAD-binding identified by match to protein family HMM PF03446 A0R3G4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5547113 5548270 . + 0 MSMEG_5464 MSMEG_5464 integral membrane transport protein identified by match to protein family HMM PF07690 A0R3G5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5548286 5549011 . + 0 MSMEG_5466 MSMEG_5466 oxidoreductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R3G6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5548969 5549820 . - 0 MSMEG_5465 MSMEG_5465 transcriptional regulator, AraC family protein identified by match to protein family HMM PF00165; match to protein family HMM PF02311 A0R3G7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5550191 5551345 . - 0 MSMEG_5468 MSMEG_5468 conserved hypothetical protein A0R3G8 No unknown Rv0996 Rv0996 NC_008596.1 Mycobrowser_v3 CDS 5551581 5552210 . - 0 MSMEG_5469 MSMEG_5469 acetyltransferase, GNAT family protein identified by match to protein family HMM PF00583 A0R3G9 No unknown Rv0995 Rv0995 NC_008596.1 Mycobrowser_v3 CDS 5552239 5553486 . - 0 MSMEG_5470 MSMEG_5470 molybdopterin biosynthesis protein MoeA 1 identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177 A0R3H0 No unknown Rv0994 Rv0994 NC_008596.1 Mycobrowser_v3 CDS 5553543 5554439 . - 0 MSMEG_5471 galU UTP-glucose-1-phosphate uridylyltransferase identified by match to protein family HMM PF00483 A0R3H1 No unknown Rv0993 Rv0993 NC_008596.1 Mycobrowser_v3 CDS 5554506 5555090 . + 0 MSMEG_5472 MSMEG_5472 5,10-methenyltetrahydrofolate synthetase identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727 A0R3H2 No unknown Rv0992c Rv0992c NC_008596.1 Mycobrowser_v3 CDS 5555211 5557037 . + 0 MSMEG_5473 MSMEG_5473 transporter identified by match to protein family HMM PF00324 A0R3H3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5557034 5557930 . + 0 MSMEG_5474 MSMEG_5474 universal stress protein family protein identified by match to protein family HMM PF00582 A0R3H4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5557934 5558698 . - 0 MSMEG_5475 MSMEG_5475 acetate operon repressor identified by match to protein family HMM PF01614 A0R3H5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5572487 5573635 . + 0 MSMEG_5491 MSMEG_5491 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0R3J1 No unknown Rv0975c Rv0975c NC_008596.1 Mycobrowser_v3 CDS 5558806 5560602 . - 0 MSMEG_5476 gcl glyoxylate carboligase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR01504 A0R3H6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5560599 5561513 . - 0 MSMEG_5477 MSMEG_5477 2-hydroxy-3-oxopropionate reductase identified by match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR01505 A0R3H7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5697737 5698330 . - 0 MSMEG_5612 MSMEG_5612 amino-acid acetyltransferase identified by match to protein family HMM PF00583 A0R3V8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5561544 5562377 . - 0 MSMEG_5478 MSMEG_5478 hydroxypyruvate isomerase, putative identified by similarity to SP:P30147; match to protein family HMM PF01261 A0R3H8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5562618 5562938 . + 0 MSMEG_5479 MSMEG_5479 type I antifreeze protein identified by match to protein family HMM TIGR02605 A0R3H9 No unknown Rv0991c Rv0991c NC_008596.1 Mycobrowser_v3 CDS 5563017 5563667 . + 0 MSMEG_5481 MSMEG_5481 conserved hypothetical protein A0R3I0 No unknown Rv0990c Rv0990c NC_008596.1 Mycobrowser_v3 CDS 5563661 5563867 . - 0 MSMEG_5480 MSMEG_5480 hypothetical protein identified by Glimmer2; putative A0R3I1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5564013 5564483 . + 0 MSMEG_5482 mscL large conductance mechanosensitive channel protein identified by match to protein family HMM PF01741; match to protein family HMM TIGR00220 A0R3I2 No unknown Rv0985c Rv0985c NC_008596.1 Mycobrowser_v3 CDS 5564562 5565209 . - 0 MSMEG_5483 MSMEG_5483 porin A0R3I3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5565602 5565760 . - 0 MSMEG_5484 MSMEG_5484 conserved hypothetical protein A0R3I4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5565920 5566456 . - 0 MSMEG_5485 MSMEG_5485 molybdopterin biosynthesis protein identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177 A0R3I5 No unknown Rv0984 Rv0984 NC_008596.1 Mycobrowser_v3 CDS 5602005 5602658 . - 0 MSMEG_5514 MSMEG_5514 hypothetical protein identified by Glimmer2; putative A0R3L3 No unknown NC_008596.1 Mycobrowser_v3 CDS 2380654 2381098 . + 0 MSMEG_2298 MSMEG_2298 protein NrdI; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF07972 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5566507 5567841 . - 0 MSMEG_5486 MSMEG_5486 peptidase S1 and S6, chymotrypsin/Hap identified by match to protein family HMM PF00089; match to protein family HMM PF00595 A0R3I6 No unknown Rv0983 Rv0983 NC_008596.1 Mycobrowser_v3 CDS 5568015 5569535 . - 0 MSMEG_5487 MSMEG_5487 sensor histidine kinase identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 A0R3I7 No unknown Rv0982 Rv0982 NC_008596.1 Mycobrowser_v3 CDS 5570348 5570521 . - 0 MSMEG_5489 rpmF ribosomal protein L32 identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031 A0R3I9 No unknown Rv0979A Rv0979A NC_008596.1 Mycobrowser_v3 CDS 5570784 5572490 . + 0 MSMEG_5490 MSMEG_5490 conserved hypothetical protein identified by match to protein family HMM PF07287 A0R3J0 No unknown Rv0976c Rv0976c NC_008596.1 Mycobrowser_v3 CDS 4714304 4715712 . - 0 MSMEG_4629 folC FolC bifunctional protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF02875; match to protein family HMM TIGR01499 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5573632 5575227 . + 0 MSMEG_5492 MSMEG_5492 acetyl-CoA carboxylase carboxyltransferase identified by match to protein family HMM PF01039 A0R3J2 No unknown Rv0974c Rv0974c NC_008596.1 Mycobrowser_v3 CDS 5668343 5668813 . - 0 MSMEG_5579 MSMEG_5579 MarR-family protein transcriptional regulator identified by match to protein family HMM PF01022; match to protein family HMM PF01047 A0R3S6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5575327 5577273 . + 0 MSMEG_5493 MSMEG_5493 acetyl-/propionyl-coenzyme A carboxylase alpha chain identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786 A0R3J3 No unknown Rv0973c Rv0973c NC_008596.1 Mycobrowser_v3 CDS 5577270 5578430 . + 0 MSMEG_5494 MSMEG_5494 acyl-CoA dehydrogenase fadE12 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0R3J4 No unknown Rv0972c Rv0972c NC_008596.1 Mycobrowser_v3 CDS 5578430 5579197 . + 0 MSMEG_5495 MSMEG_5495 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R3J5 No unknown Rv0971c Rv0971c NC_008596.1 Mycobrowser_v3 CDS 5579234 5580490 . + 0 MSMEG_5496 MSMEG_5496 MscS Mechanosensitive ion channel identified by match to protein family HMM PF00924 A0R3J6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5580542 5580670 . + 0 MSMEG_5497 MSMEG_5497 conserved hypothetical protein A0R3J7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5580675 5581037 . - 0 MSMEG_5498 MSMEG_5498 conserved hypothetical protein A0R3J8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5581091 5581405 . - 0 MSMEG_5499 MSMEG_5499 conserved hypothetical protein A0R3J9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5581863 5582015 . - 0 MSMEG_5500 MSMEG_5500 hypothetical protein identified by Glimmer2; putative A0R3K0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5582007 5584286 . + 0 MSMEG_5501 MSMEG_5501 hypothetical protein identified by Glimmer2; putative A0R3K1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5584716 5586893 . + 0 MSMEG_5502 MSMEG_5502 hypothetical protein identified by Glimmer2; putative A0R3K2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5587465 5588505 . + 0 MSMEG_5503 MSMEG_5503 hypothetical protein identified by Glimmer2; putative A0R3K3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5588558 5589319 . + 0 MSMEG_5504 MSMEG_5504 conserved secreted protein identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF05368 A0R3K4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5697272 5697730 . + 0 MSMEG_5611 MSMEG_5611 spore protein identified by match to protein family HMM PF00011 A0R3V7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5589415 5589999 . + 0 MSMEG_5505 MSMEG_5505 conserved hypothetical protein identified by match to protein family HMM PF08044 A0R3K5 No unknown Rv0966c Rv0966c NC_008596.1 Mycobrowser_v3 CDS 5590921 5592249 . - 0 MSMEG_5507 MSMEG_5507 hypothetical protein identified by Glimmer2; putative A0R3K7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5593079 5594662 . - 0 MSMEG_5508 MSMEG_5508 alkaline phosphatase identified by match to protein family HMM PF00245; match to protein family HMM TIGR01409 A0R3K8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5594766 5595632 . + 0 MSMEG_5509 MSMEG_5509 conserved hypothetical protein A0R3K9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5596653 5598653 . - 0 MSMEG_5511 MSMEG_5511 von Willebrand factor, type A A0R3L0 No unknown Rv0959 Rv0959 NC_008596.1 Mycobrowser_v3 CDS 5598646 5600031 . - 0 MSMEG_5512 MSMEG_5512 magnesium chelatase A0R3L1 No unknown Rv0958 Rv0958 NC_008596.1 Mycobrowser_v3 CDS 5600142 5601998 . + 0 MSMEG_5513 MSMEG_5513 serine/threonine-protein kinase PknE identified by match to protein family HMM PF00069 A0R3L2 No unknown Rv1266c Rv1266c NC_008596.1 Mycobrowser_v3 CDS 5602692 5604275 . - 0 MSMEG_5515 purH bifunctional purine biosynthesis protein PurH identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355 A0R3L4 No unknown Rv0957 Rv0957 NC_008596.1 Mycobrowser_v3 CDS 5604286 5604897 . - 0 MSMEG_5516 purN phosphoribosylglycinamide formyltransferase identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639 A0R3L5 No unknown Rv0956 Rv0956 NC_008596.1 Mycobrowser_v3 CDS 5604926 5606389 . - 0 MSMEG_5517 MSMEG_5517 conserved hypothetical protein A0R3L6 No unknown Rv0955 Rv0955 NC_008596.1 Mycobrowser_v3 CDS 5606450 5607349 . - 0 MSMEG_5518 MSMEG_5518 antigen 34 kDa A0R3L7 No unknown Rv0954 Rv0954 NC_008596.1 Mycobrowser_v3 CDS 5607496 5608626 . - 0 MSMEG_5519 MSMEG_5519 monooxygenase identified by match to protein family HMM PF00296 A0R3L8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5608770 5609618 . + 0 MSMEG_5520 MSMEG_5520 conserved hypothetical protein identified by match to protein family HMM PF00296 A0R3L9 No unknown Rv0953c Rv0953c NC_008596.1 Mycobrowser_v3 CDS 5609621 5611144 . - 0 MSMEG_5521 MSMEG_5521 acetyl-CoA acetyltransferase A0R3M0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5611326 5611943 . + 0 MSMEG_5522 MSMEG_5522 transcriptional Regulator, TetR family protein identified by match to protein family HMM PF00440 A0R3M1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5612016 5613869 . + 0 MSMEG_5523 MSMEG_5523 peptidase identified by match to protein family HMM PF00326; match to protein family HMM PF02129 A0R3M2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5613938 5614840 . - 0 MSMEG_5524 sucD succinyl-CoA synthetase, alpha subunit identified by similarity to SP:P80865; match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019 A0R3M3 No unknown Rv0952 Rv0952 NC_008596.1 Mycobrowser_v3 CDS 5614853 5616016 . - 0 MSMEG_5525 sucC succinyl-CoA synthetase, beta subunit identified by similarity to SP:P80886; match to protein family HMM PF00549; match to protein family HMM TIGR01016 A0R3M4 No unknown Rv0951 Rv0951 NC_008596.1 Mycobrowser_v3 CDS 5616372 5617415 . + 0 MSMEG_5526 MSMEG_5526 peptidoglycan-binding LysM identified by match to protein family HMM PF01551 A0R3M5 No unknown Rv0950c Rv0950c NC_008596.1 Mycobrowser_v3 CDS 5617416 5618099 . + 0 MSMEG_5527 MSMEG_5527 conserved hypothetical protein A0R3M6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5618136 5618255 . - 0 MSMEG_5528 MSMEG_5528 hypothetical protein identified by Glimmer2; putative A0R3M7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5618274 5619242 . + 0 MSMEG_5529 MSMEG_5529 hypothetical protein identified by Glimmer2; putative A0R3M8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5619221 5620093 . + 0 MSMEG_5530 MSMEG_5530 putative aliphatic sulfonates transport permease protein SsuC identified by match to protein family HMM PF00528 A0R3M9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5620090 5620818 . + 0 MSMEG_5531 MSMEG_5531 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0R3N0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5620808 5622400 . + 0 MSMEG_5532 MSMEG_5532 FAD dependent oxidoreductase identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992 A0R3N1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5622397 5622798 . + 0 MSMEG_5533 MSMEG_5533 4Fe-4S ferredoxin, iron-sulfur binding identified by match to protein family HMM PF00037 A0R3N2,A4ZHT5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4862862 4863533 . - 0 MSMEG_4760 MSMEG_4760 conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5622802 5625153 . - 0 MSMEG_5534 pcrA ATP-dependent DNA helicase PcrA identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073 A0R3N3 No unknown Rv0949 Rv0949 NC_008596.1 Mycobrowser_v3 CDS 5625064 5625345 . + 0 MSMEG_5535 MSMEG_5535 hypothetical protein identified by Glimmer2; putative A0R3N4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5625390 5625656 . + 0 MSMEG_5536 MSMEG_5536 chorismate mutase identified by match to protein family HMM TIGR01808 A0R3N5 No unknown Rv0948c Rv0948c NC_008596.1 Mycobrowser_v3 CDS 5625750 5627759 . - 0 MSMEG_5537 MSMEG_5537 conserved integral membrane protein identified by match to protein family HMM PF01757 A0R3N6 No unknown Rv0111 Rv0111 NC_008596.1 Mycobrowser_v3 CDS 5627890 5628903 . + 0 MSMEG_5539 MSMEG_5539 hypothetical protein identified by Glimmer2; putative A0R3N7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5628893 5630341 . - 0 MSMEG_5538 MSMEG_5538 [NADP+] succinate-semialdehyde dehydrogenase identified by match to protein family HMM PF00171 A0R3N8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5630392 5632041 . + 0 MSMEG_5541 pgi glucose-6-phosphate isomerase identified by similarity to SP:P11537; match to protein family HMM PF00342 A0R3N9 No unknown Rv0946c Rv0946c NC_008596.1 Mycobrowser_v3 CDS 5632038 5632613 . - 0 MSMEG_5540 MSMEG_5540 conserved hypothetical protein A0R3P0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2383423 2384536 . + 0 MSMEG_2300 MSMEG_2300 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5633446 5634195 . - 0 MSMEG_5544 MSMEG_5544 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0R3P3 No unknown Rv0945 Rv0945 NC_008596.1 Mycobrowser_v3 CDS 5634240 5635106 . - 0 MSMEG_5545 MSMEG_5545 formamidopyrimidine-DNA glycosylase identified by match to protein family HMM PF01149; match to protein family HMM PF06831 A0R3P4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5635137 5636897 . + 0 MSMEG_5547 MSMEG_5547 conserved hypothetical protein A0R3P5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5636862 5637251 . - 0 MSMEG_5546 MSMEG_5546 membrane spanning protein identified by match to protein family HMM PF04020 A0R3P6 No unknown Rv1903 Rv1903 NC_008596.1 Mycobrowser_v3 CDS 5637258 5637998 . - 0 MSMEG_5548 cobF precorrin-6A synthase (deacetylating) identified by match to protein family HMM PF00590; match to protein family HMM TIGR02434 A0R3P7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5638116 5639345 . + 0 MSMEG_5549 MSMEG_5549 conserved hypothetical protein A0R3P8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5640458 5641219 . + 0 MSMEG_5551 MSMEG_5551 stas domain protein identified by match to protein family HMM PF01740 A0R3P9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5641267 5643117 . + 0 MSMEG_5553 cheR CheR methyltransferase, SAM binding domain protein identified by match to protein family HMM PF00989; match to protein family HMM PF01739; match to protein family HMM PF03705; match to protein family HMM TIGR00229 A0R3Q0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5643114 5643251 . - 0 MSMEG_5552 MSMEG_5552 conserved hypothetical protein A0R3Q1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5643478 5644194 . - 0 MSMEG_5554 MSMEG_5554 antar domain protein identified by match to protein family HMM PF03861 A0R3Q2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5645336 5646550 . + 0 MSMEG_5556 MSMEG_5556 MFS permease identified by match to protein family HMM PF07690 A0R3Q3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5646557 5647120 . - 0 MSMEG_5557 MSMEG_5557 conserved hypothetical protein A0R3Q4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5647334 5647645 . + 0 MSMEG_5558 MSMEG_5558 hypothetical protein identified by Glimmer2; putative A0R3Q5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5647818 5649233 . + 0 MSMEG_5559 MSMEG_5559 metabolite/sugar transport protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879 A0R3Q6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5649256 5649882 . + 0 MSMEG_5560 MSMEG_5560 hypothetical protein identified by Glimmer2; putative A0R3Q7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5651232 5652212 . - 0 MSMEG_5563 MSMEG_5563 AraC-family protein transcriptional regulator identified by match to protein family HMM PF00165; match to protein family HMM PF01965 A0R3R0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5652298 5653074 . + 0 MSMEG_5564 MSMEG_5564 NAD(P)H dehydrogenase, quinone family protein identified by similarity to SP:P16083; match to protein family HMM PF02525 A0R3R1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5653075 5653701 . - 0 MSMEG_5565 MSMEG_5565 conserved hypothetical protein A0R3R2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5653799 5654224 . - 0 MSMEG_5566 MSMEG_5566 transcriptional regulator identified by match to protein family HMM PF01047 A0R3R3 No unknown Rv1404 Rv1404 NC_008596.1 Mycobrowser_v3 CDS 5654425 5655027 . - 0 MSMEG_5567 MSMEG_5567 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R3R4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5698339 5698731 . - 0 MSMEG_5613 MSMEG_5613 probable conserved transmembrane protein A0R3V9 No unknown Rv0912 Rv0912 NC_008596.1 Mycobrowser_v3 CDS 5655119 5655880 . + 0 MSMEG_5568 MSMEG_5568 clavaldehyde dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R3R5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5655917 5656684 . + 0 MSMEG_5569 MSMEG_5569 clavaldehyde dehydrogenase identified by match to protein family HMM PF00106 A0R3R6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5656824 5659091 . - 0 MSMEG_5570 MSMEG_5570 DNA ligase identified by match to protein family HMM PF01068; match to protein family HMM PF04679; match to protein family HMM TIGR02777; match to protein family HMM TIGR02778; match to protein family HMM TIGR02779 A0R3R7 No unknown Rv0938 Rv0938 NC_008596.1 Mycobrowser_v3 CDS 5659133 5660218 . - 0 MSMEG_5571 MSMEG_5571 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0R3R8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5660234 5661112 . - 0 MSMEG_5572 MSMEG_5572 sugar ABC transporter permease protein identified by match to protein family HMM PF00528 A0R3R9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5661109 5662071 . - 0 MSMEG_5573 MSMEG_5573 sugar ABC transporter permease protein identified by match to protein family HMM PF00528 A0R3S0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5662068 5663411 . - 0 MSMEG_5574 MSMEG_5574 substrate binding protein identified by match to protein family HMM PF01547 A0R3S1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5663425 5664351 . - 0 MSMEG_5575 MSMEG_5575 repressor identified by match to protein family HMM PF04198 A0R3S2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1074482 1074904 . - 0 MSMEG_1004 MSMEG_1004 This is the transposed copy of the gene fragment that was disrupted by an IS1096 element elsewhere in the chromosome.; conserved hypothetical protein, interruption-N; identified by similarity to OMNI:NTL02MT01721 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5908629 5909528 . + 0 MSMEG_5844 MSMEG_5844 conserved hypothetical protein A0R4I2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5664415 5665851 . + 0 MSMEG_5576 MSMEG_5576 D-mannonate oxidoreductase identified by match to protein family HMM PF01232; match to protein family HMM PF08125 A0R3S3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5665848 5666768 . + 0 MSMEG_5577 MSMEG_5577 fructokinase identified by match to protein family HMM PF00294 A0R3S4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5666805 5668283 . - 0 MSMEG_5578 MSMEG_5578 hypothetical protein identified by Glimmer2; putative A0R3S5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5668970 5669956 . + 0 MSMEG_5580 MSMEG_5580 Ku protein identified by match to protein family HMM PF02735; match to protein family HMM TIGR02772 A0R3S7 No unknown Rv0937c Rv0937c NC_008596.1 Mycobrowser_v3 CDS 5669968 5670690 . - 0 MSMEG_5581 MSMEG_5581 conserved hypothetical integral membrane protein identified by match to protein family HMM TIGR02206 A0R3S8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5670763 5671227 . - 0 MSMEG_5582 MSMEG_5582 hypothetical protein identified by Glimmer2; putative A0R3S9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5671280 5673175 . - 0 MSMEG_5583 MSMEG_5583 HNH endonuclease identified by match to protein family HMM PF01844; match to protein family HMM PF02720 A0R3T0 No unknown Rv2100,Rv3776 Rv2100,Rv3776 NC_008596.1 Mycobrowser_v3 CDS 5673254 5674048 . + 0 MSMEG_5584 MSMEG_5584 short chain dehydrogenase identified by match to protein family HMM PF00106 A0R3T1 No unknown Rv0927c Rv0927c NC_008596.1 Mycobrowser_v3 CDS 5674061 5675137 . + 0 MSMEG_5586 MSMEG_5586 conserved hypothetical protein identified by match to protein family HMM PF01113; match to protein family HMM PF01408 A0R3T2 No unknown Rv0926c Rv0926c NC_008596.1 Mycobrowser_v3 CDS 5675106 5675636 . - 0 MSMEG_5585 MSMEG_5585 hypothetical protein identified by Glimmer2; putative A0R3T3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5675160 5675426 . + 0 MSMEG_5587 MSMEG_5587 hypothetical protein identified by Glimmer2; putative A0R3T4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5675545 5675724 . + 0 MSMEG_5588 MSMEG_5588 hypothetical protein identified by Glimmer2; putative A0R3T5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5675819 5677042 . + 0 MSMEG_5589 MSMEG_5589 manganese transport protein MntH identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197 A0R3T6 No unknown Rv0924c Rv0924c NC_008596.1 Mycobrowser_v3 CDS 5677043 5678101 . + 0 MSMEG_5591 MSMEG_5591 conserved hypothetical protein identified by match to protein family HMM PF05908 A0R3T7 No unknown Rv0923c Rv0923c NC_008596.1 Mycobrowser_v3 CDS 5678088 5679185 . - 0 MSMEG_5590 MSMEG_5590 carboxylate-amine ligase Nfa27300 identified by match to protein family HMM PF04107; match to protein family HMM TIGR02050 A0R3T8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5679244 5680065 . + 0 MSMEG_5592 MSMEG_5592 conserved hypothetical protein A0R3T9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5680074 5682029 . - 0 MSMEG_5593 MSMEG_5593 pyruvate dehydrogenase identified by match to protein family HMM PF00205; match to protein family HMM PF00355; match to protein family HMM PF02775; match to protein family HMM PF02776 A0R3U0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5682026 5683654 . - 0 MSMEG_5594 MSMEG_5594 ferredoxin-dependent glutamate synthase identified by match to protein family HMM PF00355; match to protein family HMM PF01645 A0R3U1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5683665 5684138 . - 0 MSMEG_5595 MSMEG_5595 MarR-family protein transcriptional regulator identified by match to protein family HMM PF01047 A0R3U2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5684407 5685162 . + 0 MSMEG_5596 MSMEG_5596 oxidoreductase identified by match to protein family HMM PF00106 A0R3U3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5685226 5685846 . + 0 MSMEG_5597 MSMEG_5597 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R3U4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5686048 5686182 . - 0 MSMEG_5599 MSMEG_5599 hypothetical protein identified by Glimmer2; putative A0R3U5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5686847 5687998 . + 0 MSMEG_5600 MSMEG_5600 conserved hypothetical protein A0R3U6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5688013 5688570 . + 0 MSMEG_5601 MSMEG_5601 hypothetical protein identified by Glimmer2; putative A0R3U7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5688973 5689389 . + 0 MSMEG_5602 MSMEG_5602 conserved hypothetical protein A0R3U8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5689444 5689782 . + 0 MSMEG_5603 MSMEG_5603 transcriptional regulator, ArsR family protein identified by match to protein family HMM PF01022 A0R3U9 No unknown Rv1994c Rv1994c NC_008596.1 Mycobrowser_v3 CDS 5689743 5690408 . + 0 MSMEG_5604 MSMEG_5604 integral membrane protein A0R3V0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5690437 5691825 . + 0 MSMEG_5605 MSMEG_5605 cytochrome bd ubiquinol oxidase, subunit I identified by match to protein family HMM PF01654 A0R3V1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5691822 5692820 . + 0 MSMEG_5606 MSMEG_5606 cytochrome bd-I oxidase subunit II identified by match to protein family HMM PF02322 A0R3V2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5693137 5693385 . + 0 MSMEG_5607 MSMEG_5607 hypothetical protein identified by Glimmer2; putative A0R3V3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5693487 5694701 . + 0 MSMEG_5608 MSMEG_5608 acetyl-CoA acetyltransferase A0R3V4 No unknown Rv0914c Rv0914c NC_008596.1 Mycobrowser_v3 CDS 5694705 5696228 . + 0 MSMEG_5609 MSMEG_5609 carotenoid oxygenase identified by match to protein family HMM PF03055 A0R3V5 No unknown Rv0913c Rv0913c NC_008596.1 Mycobrowser_v3 CDS 5696228 5697178 . + 0 MSMEG_5610 MSMEG_5610 putative transcriptional regulator family protein identified by match to protein family HMM PF01638 A0R3V6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5699214 5699942 . - 0 MSMEG_5614 MSMEG_5614 conserved hypothetical protein identified by match to protein family HMM PF05853 A0R3W1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5699957 5700727 . - 0 MSMEG_5616 MSMEG_5616 glyoxalase/bleomycin resistance protein/dioxygenase identified by match to protein family HMM PF00903 A0R3W2 No unknown Rv0911 Rv0911 NC_008596.1 Mycobrowser_v3 CDS 5700826 5701302 . - 0 MSMEG_5617 MSMEG_5617 immunogenic protein MPT63 A0R3W3 No unknown Rv1926c Rv1926c NC_008596.1 Mycobrowser_v3 CDS 5701411 5702439 . - 0 MSMEG_5618 MSMEG_5618 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0R3W4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5702436 5703611 . - 0 MSMEG_5619 MSMEG_5619 acyl-CoA dehydrogenase domain protein identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0R3W5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5703608 5704387 . - 0 MSMEG_5620 MSMEG_5620 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R3W6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5704384 5705304 . - 0 MSMEG_5621 MSMEG_5621 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441 A0R3W7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5705301 5706458 . - 0 MSMEG_5622 MSMEG_5622 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0R3W8 No unknown NC_008596.1 Mycobrowser_v3 CDS 1087392 1087836 . + 0 MSMEG_1018 MSMEG_1018 protein NrdI; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF07972 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5706470 5707621 . - 0 MSMEG_5623 MSMEG_5623 L-carnitine dehydratase/bile acid-inducible protein F identified by match to protein family HMM PF02515 A0R3W9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5707618 5708538 . - 0 MSMEG_5624 MSMEG_5624 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0R3X0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5708555 5710393 . - 0 MSMEG_5625 MSMEG_5625 cyclododecanone monooxygenase identified by match to protein family HMM PF01266 A0R3X1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5710390 5711562 . - 0 MSMEG_5626 MSMEG_5626 luciferase identified by match to protein family HMM PF00296 A0R3X2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5725931 5726662 . - 0 MSMEG_5639 MSMEG_5639 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R3Y5 No unknown Rv0905 Rv0905 NC_008596.1 Mycobrowser_v3 CDS 5711559 5712947 . - 0 MSMEG_5627 MSMEG_5627 Rieske [2Fe-2S] domain protein identified by match to protein family HMM PF00355 A0R3X3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5712981 5713826 . - 0 MSMEG_5628 MSMEG_5628 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0R3X4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5713967 5715571 . + 0 MSMEG_5629 MSMEG_5629 conserved hypothetical protein A0R3X5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5715578 5716315 . + 0 MSMEG_5630 MSMEG_5630 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07702 A0R3X6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5716317 5717849 . + 0 MSMEG_5631 MSMEG_5631 AMP-dependent synthetase and ligase identified by match to protein family HMM PF00501 A0R3X7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5717850 5718623 . + 0 MSMEG_5632 MSMEG_5632 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0R3X8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5718620 5720092 . + 0 MSMEG_5633 MSMEG_5633 feruloyl-CoA synthetase identified by match to protein family HMM PF00501 A0R3X9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5720095 5720538 . - 0 MSMEG_5634 MSMEG_5634 conserved hypothetical protein A0R3Y0 No unknown Rv0910 Rv0910 NC_008596.1 Mycobrowser_v3 CDS 5720548 5720736 . - 0 MSMEG_5635 MSMEG_5635 conserved hypothetical protein A0R3Y1 No unknown Rv0909 Rv0909 NC_008596.1 Mycobrowser_v3 CDS 1090161 1091274 . + 0 MSMEG_1020 MSMEG_1020 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5720762 5723137 . - 0 MSMEG_5636 MSMEG_5636 P-type ATPase - metal cation transport identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494 A0R3Y2 No unknown Rv0908 Rv0908 NC_008596.1 Mycobrowser_v3 CDS 5723151 5724767 . - 0 MSMEG_5637 MSMEG_5637 penicillin-binding protein 4 identified by match to protein family HMM PF00144 A0R3Y3 No unknown Rv0907 Rv0907 NC_008596.1 Mycobrowser_v3 CDS 5724814 5725929 . - 0 MSMEG_5638 MSMEG_5638 metallo-beta-lactamase family protein A0R3Y4 No unknown Rv0906 Rv0906 NC_008596.1 Mycobrowser_v3 CDS 5726689 5728815 . - 0 MSMEG_5640 MSMEG_5640 amylo-alpha-1,6-glucosidase identified by match to protein family HMM PF06202 A0R3Y6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5728812 5729963 . - 0 MSMEG_5641 MSMEG_5641 glycosyl transferase, group 1 family protein identified by match to protein family HMM PF00534 A0R3Y7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5730092 5731561 . + 0 MSMEG_5642 MSMEG_5642 acetyl-coenzyme a carboxylase carboxyl transferase identified by match to protein family HMM PF01039 A0R3Y8 No unknown Rv0904c Rv0904c NC_008596.1 Mycobrowser_v3 CDS 5731669 5732505 . + 0 MSMEG_5643 MSMEG_5643 conserved hypothetical protein A0R3Y9 No unknown Rv1482c Rv1482c NC_008596.1 Mycobrowser_v3 CDS 5732558 5734564 . - 0 MSMEG_5644 MSMEG_5644 membrane protein identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062 A0R3Z0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5734567 5735295 . - 0 MSMEG_5645 MSMEG_5645 conserved hypothetical protein A0R3Z1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5735881 5736054 . + 0 MSMEG_5646 MSMEG_5646 conserved hypothetical protein A0R3Z2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5736936 5737325 . - 0 MSMEG_5648 MSMEG_5648 hypothetical protein identified by Glimmer2; putative A0R3Z3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5793234 5793848 . - 0 MSMEG_5708 MSMEG_5708 hypothetical protein identified by Glimmer2; putative A0R453 No unknown NC_008596.1 Mycobrowser_v3 CDS 5737445 5739058 . - 0 MSMEG_5649 MSMEG_5649 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R3Z4 No unknown Rv2505c Rv2505c NC_008596.1 Mycobrowser_v3 CDS 5739055 5740743 . - 0 MSMEG_5650 MSMEG_5650 AMP-dependent synthetase and ligase identified by match to protein family HMM PF00501 A0R3Z5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5740801 5741643 . + 0 MSMEG_5651 MSMEG_5651 transcriptional regulator, LuxR family protein identified by match to protein family HMM PF00196 A0R3Z6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5741657 5742577 . - 0 MSMEG_5652 MSMEG_5652 alpha/beta hydrolase fold identified by match to protein family HMM PF00561 A0R3Z7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5899268 5899516 . - 0 MSMEG_5832 purS phosphoribosylformylglycinamidine synthase, PurS protein identified by match to protein family HMM PF02700; match to protein family HMM TIGR00302 A0R4H2 No unknown Rv0787A Rv0787A NC_008596.1 Mycobrowser_v3 CDS 5742793 5743662 . + 0 MSMEG_5654 MSMEG_5654 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R3Z8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5743637 5745124 . - 0 MSMEG_5653 MSMEG_5653 cytosine/purine/uracil/thiamine/allantoin permease family protein identified by match to protein family HMM PF02133 A0R3Z9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5745137 5745982 . - 0 MSMEG_5655 MSMEG_5655 hydrolase, carbon-nitrogen family protein identified by match to protein family HMM PF00795 A0R400 No unknown NC_008596.1 Mycobrowser_v3 CDS 5745996 5747351 . - 0 MSMEG_5656 hisD histidinol dehydrogenase identified by match to protein family HMM PF00815 A0R401 No unknown NC_008596.1 Mycobrowser_v3 CDS 5747436 5748392 . - 0 MSMEG_5657 MSMEG_5657 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R402 No unknown NC_008596.1 Mycobrowser_v3 CDS 5748411 5749523 . + 0 MSMEG_5658 MSMEG_5658 epoxide hydrolase identified by match to protein family HMM PF00561; match to protein family HMM PF06441 A0R403 No unknown NC_008596.1 Mycobrowser_v3 CDS 5749605 5751437 . - 0 MSMEG_5659 MSMEG_5659 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF00664 A0R404 No unknown NC_008596.1 Mycobrowser_v3 CDS 5765508 5766815 . - 0 MSMEG_5674 MSMEG_5674 membrane transport protein identified by match to protein family HMM PF05977; match to protein family HMM PF07690 A0R419 No unknown NC_008596.1 Mycobrowser_v3 CDS 5751434 5753386 . - 0 MSMEG_5660 MSMEG_5660 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF00664 A0R405 No unknown NC_008596.1 Mycobrowser_v3 CDS 5753419 5755335 . - 0 MSMEG_5661 MSMEG_5661 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF00664 A0R406 No unknown NC_008596.1 Mycobrowser_v3 CDS 5755451 5756161 . + 0 MSMEG_5662 prrA DNA-binding response regulator PrrA identified by similarity to SP:Q10531; match to protein family HMM PF00072; match to protein family HMM PF00486 A0R407 No unknown Rv0903c Rv0903c NC_008596.1 Mycobrowser_v3 CDS 6141800 6142360 . + 0 MSMEG_6078 MSMEG_6078 LpqE protein A0R562 No unknown Rv3584 Rv3584 NC_008596.1 Mycobrowser_v3 CDS 5756171 5757511 . + 0 MSMEG_5663 MSMEG_5663 sensor-type histidine kinase PrrB identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 A0R408 No unknown Rv0902c Rv0902c NC_008596.1 Mycobrowser_v3 CDS 5757592 5757954 . - 0 MSMEG_5664 MSMEG_5664 binding protein identified by match to protein family HMM PF00254 A0R409 No unknown NC_008596.1 Mycobrowser_v3 CDS 5757938 5758285 . - 0 MSMEG_5665 MSMEG_5665 hypothetical protein identified by Glimmer2; putative A0R410 No unknown NC_008596.1 Mycobrowser_v3 CDS 5757986 5758234 . + 0 MSMEG_5666 MSMEG_5666 conserved hypothetical protein A0R411 No unknown Rv0898c Rv0898c NC_008596.1 Mycobrowser_v3 CDS 5758241 5759800 . + 0 MSMEG_5667 MSMEG_5667 phytoene dehydrogenase A0R412 No unknown Rv0897c Rv0897c NC_008596.1 Mycobrowser_v3 CDS 5759843 5760928 . + 0 MSMEG_5669 MSMEG_5669 ISMsm2, transposase identified by similarity to GB:CAD18826.1 A0QNI3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5760925 5761374 . - 0 MSMEG_5668 MSMEG_5668 putative transcriptional regulator identified by match to protein family HMM PF01047 A0R414 No unknown NC_008596.1 Mycobrowser_v3 CDS 5761364 5762821 . - 0 MSMEG_5670 MSMEG_5670 efflux membrane protein identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711 A0R415 No unknown NC_008596.1 Mycobrowser_v3 CDS 5762879 5763358 . + 0 MSMEG_5671 MSMEG_5671 YbaK/prolyl-tRNA synthetase associated region identified by match to protein family HMM PF04073 A0R416 No unknown NC_008596.1 Mycobrowser_v3 CDS 5763378 5764682 . - 0 MSMEG_5672 gltA citrate synthase I identified by similarity to SP:P42457; match to protein family HMM PF00285; match to protein family HMM TIGR01798 A0R417 No unknown Rv0896 Rv0896 NC_008596.1 Mycobrowser_v3 CDS 5764801 5765442 . - 0 MSMEG_5673 MSMEG_5673 transcriptional regulator identified by match to protein family HMM PF00440 A0R418 No unknown NC_008596.1 Mycobrowser_v3 CDS 5766819 5767511 . - 0 MSMEG_5675 pdxH pyridoxamine 5'-phosphate oxidase identified by match to protein family HMM PF01243; match to protein family HMM TIGR00558 A0R420 No unknown Rv2607 Rv2607 NC_008596.1 Mycobrowser_v3 CDS 5767553 5768686 . + 0 MSMEG_5676 MSMEG_5676 citrate synthase identified by match to protein family HMM PF00285 A0R421 No unknown Rv0889c Rv0889c NC_008596.1 Mycobrowser_v3 CDS 5768683 5769285 . + 0 MSMEG_5677 MSMEG_5677 conserved hypothetical protein A0R422 No unknown NC_008596.1 Mycobrowser_v3 CDS 5769287 5769673 . - 0 MSMEG_5678 MSMEG_5678 glyoxalase/bleomycin resistance protein/dioxygenase identified by match to protein family HMM PF00903 A0R423 No unknown NC_008596.1 Mycobrowser_v3 CDS 5769670 5769984 . - 0 MSMEG_5679 MSMEG_5679 putative DNA-binding protein A0R424 No unknown NC_008596.1 Mycobrowser_v3 CDS 5770134 5770589 . + 0 MSMEG_5680 MSMEG_5680 glyoxalase family protein identified by match to protein family HMM PF00903 A0R425 No unknown Rv0887c Rv0887c NC_008596.1 Mycobrowser_v3 CDS 5770593 5772266 . - 0 MSMEG_5681 MSMEG_5681 probable ferredoxin/ferredoxin--NADP reductase identified by match to protein family HMM PF00037; match to protein family HMM PF07992 A0R426 No unknown Rv0886 Rv0886 NC_008596.1 Mycobrowser_v3 CDS 5772279 5773256 . - 0 MSMEG_5682 MSMEG_5682 conserved hypothetical protein A0R427 No unknown Rv0885 Rv0885 NC_008596.1 Mycobrowser_v3 CDS 5773416 5774180 . + 0 MSMEG_5683 map methionine aminopeptidase, type I identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500 A0R428 No unknown NC_008596.1 Mycobrowser_v3 CDS 5774274 5775386 . + 0 MSMEG_5684 MSMEG_5684 phosphoserine aminotransferase, putative identified by match to protein family HMM PF00266; match to protein family HMM TIGR01366 A0R429 No unknown Rv0884c Rv0884c NC_008596.1 Mycobrowser_v3 CDS 5775478 5776308 . + 0 MSMEG_5685 MSMEG_5685 DNA-binding protein A0R430 No unknown Rv0883c Rv0883c NC_008596.1 Mycobrowser_v3 CDS 5776322 5776597 . - 0 MSMEG_5686 MSMEG_5686 conserved hypothetical protein A0R431 No unknown Rv0882 Rv0882 NC_008596.1 Mycobrowser_v3 CDS 5776618 5777451 . - 0 MSMEG_5687 MSMEG_5687 23s ribosomal RNA methyltransferase identified by match to protein family HMM PF00588 A0R432 No unknown Rv0881 Rv0881 NC_008596.1 Mycobrowser_v3 CDS 5777448 5777879 . - 0 MSMEG_5688 MSMEG_5688 regulatory protein, MarR identified by match to protein family HMM PF01047 A0R433 No unknown NC_008596.1 Mycobrowser_v3 CDS 5777961 5778230 . + 0 MSMEG_5689 MSMEG_5689 conserved hypothetical protein A0R434 No unknown Rv0879c Rv0879c NC_008596.1 Mycobrowser_v3 CDS 5778239 5778691 . + 0 MSMEG_5690 MSMEG_5690 conserved hypothetical protein A0R435 No unknown NC_008596.1 Mycobrowser_v3 CDS 5778712 5779497 . - 0 MSMEG_5691 MSMEG_5691 conserved hypothetical protein A0R436 No unknown Rv0877 Rv0877 NC_008596.1 Mycobrowser_v3 CDS 5779494 5779880 . - 0 MSMEG_5692 MSMEG_5692 conserved hypothetical protein A0R437 No unknown NC_008596.1 Mycobrowser_v3 CDS 5779698 5781245 . + 0 MSMEG_5693 MSMEG_5693 transporter, major facilitator family protein identified by match to protein family HMM PF07690 A0R438 No unknown Rv0876c Rv0876c NC_008596.1 Mycobrowser_v3 CDS 5781242 5781730 . + 0 MSMEG_5694 MSMEG_5694 conserved hypothetical protein A0R439 No unknown Rv0875c Rv0875c NC_008596.1 Mycobrowser_v3 CDS 5781741 5782766 . - 0 MSMEG_5695 MSMEG_5695 glutathione S-transferase A0R440 No unknown NC_008596.1 Mycobrowser_v3 CDS 5782812 5783261 . - 0 MSMEG_5696 MSMEG_5696 'Cold-shock' DNA-binding domain protein identified by match to protein family HMM PF00313 A0R441 No unknown Rv0871 Rv0871 NC_008596.1 Mycobrowser_v3 CDS 5783385 5783795 . + 0 MSMEG_5697 MSMEG_5697 integral membrane protein identified by match to protein family HMM PF03733 A0R442 No unknown Rv0870c Rv0870c NC_008596.1 Mycobrowser_v3 CDS 4889687 4890154 . - 0 MSMEG_4788 MSMEG_4788 virulence factor mce family protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5783792 5784877 . + 0 MSMEG_5698 moaA molybdenum cofactor biosynthesis protein A identified by match to protein family HMM PF04055; match to protein family HMM PF06463; match to protein family HMM TIGR02666 A0R443 No unknown Rv0869c Rv0869c NC_008596.1 Mycobrowser_v3 CDS 5784902 5785144 . + 0 MSMEG_5699 MSMEG_5699 ThiS family protein identified by match to protein family HMM PF02597 A0R444 No unknown Rv0868c Rv0868c NC_008596.1 Mycobrowser_v3 CDS 5785578 5787038 . + 0 MSMEG_5700 MSMEG_5700 secreted protein identified by match to protein family HMM PF06737 A0R445 No unknown Rv0867c Rv0867c NC_008596.1 Mycobrowser_v3 CDS 5787056 5787484 . - 0 MSMEG_5701 moaE molybdopterin converting factor, subunit 2 identified by match to protein family HMM PF02391 A0R446 No unknown Rv0866 Rv0866 NC_008596.1 Mycobrowser_v3 CDS 5787521 5788018 . - 0 MSMEG_5702 MSMEG_5702 molybdenum cofactor synthesis domain protein identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177 A0R447 No unknown Rv0865 Rv0865 NC_008596.1 Mycobrowser_v3 CDS 5787997 5788470 . - 0 MSMEG_5703 moaC molybdenum cofactor biosynthesis protein C identified by match to protein family HMM PF01967; match to protein family HMM TIGR00581 A0R448 No unknown Rv0864 Rv0864 NC_008596.1 Mycobrowser_v3 CDS 5788473 5788670 . - 0 MSMEG_5704 MSMEG_5704 conserved hypothetical protein A0R449 No unknown Rv0863 Rv0863 NC_008596.1 Mycobrowser_v3 CDS 5788729 5790984 . + 0 MSMEG_5705 MSMEG_5705 conserved hypothetical protein A0R450 No unknown Rv0862c Rv0862c NC_008596.1 Mycobrowser_v3 CDS 5791025 5792782 . + 0 MSMEG_5706 MSMEG_5706 DNA or RNA helicase of superfamily protein II identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851 A0R451 No unknown Rv0861c Rv0861c NC_008596.1 Mycobrowser_v3 CDS 5792803 5793156 . - 0 MSMEG_5707 MSMEG_5707 cupin domain protein identified by match to protein family HMM PF07883 A0R452 No unknown Rv2619c Rv2619c NC_008596.1 Mycobrowser_v3 CDS 1104605 1106046 . - 0 MSMEG_1036 MSMEG_1036 monooxygenase, NtaA/SnaA/SoxA family; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5795681 5796355 . - 0 MSMEG_5711 MSMEG_5711 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0R456 No unknown Rv3174 Rv3174 NC_008596.1 Mycobrowser_v3 CDS 5796496 5797728 . + 0 MSMEG_5713 MSMEG_5713 major facilitator family protein transporter identified by match to protein family HMM PF06779; match to protein family HMM PF07690 A0R457 No unknown NC_008596.1 Mycobrowser_v3 CDS 5797558 5798490 . - 0 MSMEG_5712 MSMEG_5712 LysR-family protein transcriptional regulator identified by match to protein family HMM PF00126 A0R458 No unknown NC_008596.1 Mycobrowser_v3 CDS 5798619 5799317 . + 0 MSMEG_5714 MSMEG_5714 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0R459 No unknown NC_008596.1 Mycobrowser_v3 CDS 5127624 5128681 . + 0 MSMEG_5033 MSMEG_5033 Tap protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5799650 5800642 . - 0 MSMEG_5715 MSMEG_5715 conserved hypothetical protein identified by match to protein family HMM PF00296 A0R461 No unknown NC_008596.1 Mycobrowser_v3 CDS 5800752 5801177 . + 0 MSMEG_5717 MSMEG_5717 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0R462 No unknown NC_008596.1 Mycobrowser_v3 CDS 5801244 5801774 . - 0 MSMEG_5718 MSMEG_5718 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R463 No unknown NC_008596.1 Mycobrowser_v3 CDS 5801864 5803072 . + 0 MSMEG_5719 MSMEG_5719 oxidoreductase identified by match to protein family HMM PF01494 A0R464 No unknown NC_008596.1 Mycobrowser_v3 CDS 5803163 5805325 . - 0 MSMEG_5720 MSMEG_5720 putative 3-hydroxyacyl-CoA dehydrogenase identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737 A0R465 No unknown Rv0860 Rv0860 NC_008596.1 Mycobrowser_v3 CDS 5805343 5806554 . - 0 MSMEG_5721 MSMEG_5721 acetyl-CoA acetyltransferase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0R466 No unknown Rv0859 Rv0859 NC_008596.1 Mycobrowser_v3 CDS 5806701 5806889 . - 0 MSMEG_5722 MSMEG_5722 conserved hypothetical protein A0R467 No unknown NC_008596.1 Mycobrowser_v3 CDS 5807129 5807560 . - 0 MSMEG_5723 MSMEG_5723 endoribonuclease L-psp family protein identified by match to protein family HMM PF01042 A0R468 No unknown NC_008596.1 Mycobrowser_v3 CDS 5807649 5808116 . + 0 MSMEG_5724 MSMEG_5724 bacterial regulatory protein, MarR family protein identified by match to protein family HMM PF01047 A0R469 No unknown NC_008596.1 Mycobrowser_v3 CDS 5808140 5809312 . + 0 MSMEG_5725 MSMEG_5725 PLP-dependent aminotransferases identified by match to protein family HMM PF00155; match to protein family HMM PF01212 A0R470 No unknown Rv0858c Rv0858c NC_008596.1 Mycobrowser_v3 CDS 5921046 5921669 . + 0 MSMEG_5854 MSMEG_5854 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R4J3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5809341 5810558 . + 0 MSMEG_5726 MSMEG_5726 conserved hypothetical protein A0R471 No unknown NC_008596.1 Mycobrowser_v3 CDS 5810572 5811534 . + 0 MSMEG_5727 alc allantoicase identified by match to protein family HMM PF03561; match to protein family HMM TIGR02961 A0R472 No unknown NC_008596.1 Mycobrowser_v3 CDS 5811531 5812430 . + 0 MSMEG_5728 MSMEG_5728 polysaccharide deacetylase family protein identified by match to protein family HMM PF01522 A0R473 No unknown NC_008596.1 Mycobrowser_v3 CDS 5812505 5813212 . - 0 MSMEG_5729 MSMEG_5729 hydantoin racemase identified by match to protein family HMM PF01177 A0R474 No unknown NC_008596.1 Mycobrowser_v3 CDS 5841139 5842152 . - 0 MSMEG_5767 MSMEG_5767 conserved hypothetical protein A0R4A8 No unknown Rv0826 Rv0826 NC_008596.1 Mycobrowser_v3 CDS 5813209 5814771 . - 0 MSMEG_5730 MSMEG_5730 permease for cytosine/purines, uracil, thiamine, allantoin transporter identified by match to protein family HMM PF02133 A0R475 No unknown NC_008596.1 Mycobrowser_v3 CDS 5814846 5815541 . - 0 MSMEG_5731 MSMEG_5731 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0R476 No unknown NC_008596.1 Mycobrowser_v3 CDS 5815587 5816507 . - 0 MSMEG_5732 MSMEG_5732 monooxygenase identified by match to protein family HMM PF00296 A0R477 No unknown Rv3093c Rv3093c NC_008596.1 Mycobrowser_v3 CDS 5816547 5817425 . - 0 MSMEG_5733 MSMEG_5733 universal stress protein family protein identified by match to protein family HMM PF00582 A0R478 No unknown NC_008596.1 Mycobrowser_v3 CDS 5817499 5818581 . - 0 MSMEG_5734 MSMEG_5734 alpha-methylacyl-CoA racemase identified by match to protein family HMM PF02515 A0R479 No unknown Rv0855 Rv0855 NC_008596.1 Mycobrowser_v3 CDS 5818600 5820267 . + 0 MSMEG_5735 MSMEG_5735 indole-3-pyruvate decarboxylase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 A0R480 No unknown Rv0853c Rv0853c NC_008596.1 Mycobrowser_v3 CDS 5820278 5820718 . - 0 MSMEG_5736 MSMEG_5736 cyclase/dehydrase identified by match to protein family HMM PF03364 A0R481 No unknown Rv0854 Rv0854 NC_008596.1 Mycobrowser_v3 CDS 5820751 5821098 . + 0 MSMEG_5738 MSMEG_5738 conserved hypothetical protein A0R482 No unknown NC_008596.1 Mycobrowser_v3 CDS 5821095 5821262 . - 0 MSMEG_5737 MSMEG_5737 hypothetical protein identified by Glimmer2; putative A0R483 No unknown NC_008596.1 Mycobrowser_v3 CDS 5877928 5878758 . + 0 MSMEG_5812 MSMEG_5812 carveol dehydrogenase identified by match to protein family HMM PF00106 A0R4F2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5836135 5837526 . + 0 MSMEG_5760 MSMEG_5760 GntR-family protein regulator identified by match to protein family HMM PF00155; match to protein family HMM PF00392 A0R4A1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5837607 5838014 . + 0 MSMEG_5761 MSMEG_5761 cupin domain protein identified by match to protein family HMM PF07883 A0R4A2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5821317 5824838 . + 0 MSMEG_5739 MSMEG_5739 putative long-chain fatty-acid--CoA ligase identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746 A0R484 No unknown NC_008596.1 Mycobrowser_v3 CDS 5824860 5825105 . - 0 MSMEG_5740 MSMEG_5740 hypothetical protein identified by Glimmer2; putative A0R485 No unknown NC_008596.1 Mycobrowser_v3 CDS 5825153 5825788 . - 0 MSMEG_5741 MSMEG_5741 conserved hypothetical protein identified by match to protein family HMM PF02698 A0R486 No unknown NC_008596.1 Mycobrowser_v3 CDS 5825819 5826817 . - 0 MSMEG_5742 MSMEG_5742 acyltransferase domain protein identified by match to protein family HMM PF01553 A0R487 No unknown NC_008596.1 Mycobrowser_v3 CDS 5826814 5827632 . - 0 MSMEG_5743 MSMEG_5743 patatin identified by match to protein family HMM PF01734 A0R488 No unknown NC_008596.1 Mycobrowser_v3 CDS 5827650 5827940 . - 0 MSMEG_5744 gvpK gas vesicle protein K identified by match to protein family HMM PF05121 A0R489 No unknown NC_008596.1 Mycobrowser_v3 CDS 5827940 5828140 . - 0 MSMEG_5745 MSMEG_5745 gas vesicle synthesis protein identified by match to protein family HMM PF00741 A0R490 No unknown NC_008596.1 Mycobrowser_v3 CDS 5828137 5828853 . - 0 MSMEG_5746 MSMEG_5746 gas vesicle protein identified by match to protein family HMM PF06386 A0R491 No unknown NC_008596.1 Mycobrowser_v3 CDS 5828870 5829433 . - 0 MSMEG_5747 MSMEG_5747 hypothetical protein identified by Glimmer2; putative A0R492 No unknown NC_008596.1 Mycobrowser_v3 CDS 5829490 5830131 . - 0 MSMEG_5748 MSMEG_5748 hypothetical protein identified by Glimmer2; putative A0R493 No unknown NC_008596.1 Mycobrowser_v3 CDS 5830140 5830304 . - 0 MSMEG_5749 MSMEG_5749 hypothetical protein identified by Glimmer2; putative A0R494 No unknown NC_008596.1 Mycobrowser_v3 CDS 5830307 5830420 . - 0 MSMEG_5750 MSMEG_5750 hypothetical protein identified by Glimmer2; putative A0R495 No unknown NC_008596.1 Mycobrowser_v3 CDS 5830537 5830830 . - 0 MSMEG_5751 MSMEG_5751 putative adhesin/hemolysin A0R496 No unknown NC_008596.1 Mycobrowser_v3 CDS 5831541 5832110 . + 0 MSMEG_5753 MSMEG_5753 serine/threonine specific protein phosphatase identified by match to protein family HMM PF00149 A0R497 No unknown NC_008596.1 Mycobrowser_v3 CDS 5832107 5832586 . - 0 MSMEG_5752 MSMEG_5752 conserved hypothetical protein A0R498 No unknown NC_008596.1 Mycobrowser_v3 CDS 5832749 5833963 . + 0 MSMEG_5754 MSMEG_5754 gp41 protein identified by match to protein family HMM PF00589 A0R499,A4ZHT6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5834677 5835828 . - 0 MSMEG_5759 MSMEG_5759 pe family protein A0R4A0 No unknown NC_008596.1 Mycobrowser_v3 CDS 2397867 2399389 . - 0 MSMEG_2316 MSMEG_2316 monooxygenase, NtaA/SnaA/SoxA family; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5838020 5838943 . + 0 MSMEG_5762 MSMEG_5762 zinc-binding oxidoreductase identified by match to protein family HMM PF00107 A0R4A3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5838945 5839619 . + 0 MSMEG_5763 MSMEG_5763 conserved hypothetical protein A0R4A4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5839631 5840230 . + 0 MSMEG_5764 MSMEG_5764 putative cyanamide hydratase identified by match to protein family HMM PF01966 A0R4A5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5840238 5840603 . - 0 MSMEG_5765 MSMEG_5765 globin identified by match to protein family HMM PF01152 A0R4A6 No unknown Rv1542c Rv1542c NC_008596.1 Mycobrowser_v3 CDS 5840791 5841132 . + 0 MSMEG_5766 MSMEG_5766 conserved hypothetical protein identified by match to protein family HMM PF05305 A0R4A7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5842231 5842815 . + 0 MSMEG_5768 MSMEG_5768 conserved hypothetical protein A0R4A9 No unknown Rv0825c Rv0825c NC_008596.1 Mycobrowser_v3 CDS 5844594 5845598 . + 0 MSMEG_5773 MSMEG_5773 fatty acid desaturase identified by match to protein family HMM PF03405 A0R4B3 No unknown Rv0824c Rv0824c NC_008596.1 Mycobrowser_v3 CDS 5845429 5845887 . - 0 MSMEG_5772 MSMEG_5772 cytospin-A, putative A0R4B4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5845595 5846764 . + 0 MSMEG_5774 MSMEG_5774 tRNA-dihydrouridine synthase, putative identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737 A0R4B5 No unknown Rv0823c Rv0823c NC_008596.1 Mycobrowser_v3 CDS 5847201 5849369 . + 0 MSMEG_5775 MSMEG_5775 LytR/CpsA/Psr family protein identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350 A0R4B6 No unknown Rv0822c Rv0822c NC_008596.1 Mycobrowser_v3 CDS 5849446 5850114 . + 0 MSMEG_5776 phoU phosphate transport system regulatory protein PhoU identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135 A0R4B7 No unknown Rv0821c Rv0821c NC_008596.1 Mycobrowser_v3 CDS 5850116 5850631 . - 0 MSMEG_5777 MSMEG_5777 transcription regulator identified by match to protein family HMM PF01047 A0R4B8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5850730 5851704 . + 0 MSMEG_5778 MSMEG_5778 alcohol dehydrogenase, zinc-binding identified by match to protein family HMM PF00107 A0R4B9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5852502 5853428 . - 0 MSMEG_5780 pstA phosphate ABC transporter, permease protein PstA identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974 A0R4C1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5853425 5854480 . - 0 MSMEG_5781 pstC phosphate ABC transporter, permease protein PstC identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138 A0R4C2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5854529 5855665 . - 0 MSMEG_5782 pstS phosphate ABC transporter, phosphate-binding protein PstS identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975 A0R4C3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5856707 5857492 . - 0 MSMEG_5784 MSMEG_5784 transcriptional regulatory protein identified by match to protein family HMM PF00486 A0R4C4 No unknown Rv0818 Rv0818 NC_008596.1 Mycobrowser_v3 CDS 5857658 5858473 . + 0 MSMEG_5785 MSMEG_5785 probable exported protein A0R4C5 No unknown Rv0817c Rv0817c NC_008596.1 Mycobrowser_v3 CDS 5858470 5858934 . + 0 MSMEG_5786 MSMEG_5786 thiredoxin identified by match to protein family HMM PF00085 A0R4C6 No unknown Rv0816c Rv0816c NC_008596.1 Mycobrowser_v3 CDS 5858967 5859149 . - 0 MSMEG_5787 MSMEG_5787 hypothetical protein identified by Glimmer2; putative A0R4C7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5859148 5859627 . + 0 MSMEG_5788 MSMEG_5788 integral membrane protein A0R4C8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5195601 5196512 . - 0 MSMEG_5095 MSMEG_5095 This gene is disrupted by an IS1096 element.; ISMsm1, transposase orfB, truncation; identified by similarity to GP:16551202; match to protein family HMM PF00665 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5859664 5860497 . + 0 MSMEG_5789 MSMEG_5789 putative thiosulfate sulfurtransferase identified by match to protein family HMM PF00581 A0R4C9 No unknown Rv0815c Rv0815c NC_008596.1 Mycobrowser_v3 CDS 5860529 5860801 . + 0 MSMEG_5790 MSMEG_5790 SseC protein identified by match to protein family HMM PF07210 A0R4D0 No unknown Rv3118 Rv3118 NC_008596.1 Mycobrowser_v3 CDS 5860943 5861041 . + 0 MSMEG_5791 MSMEG_5791 conserved hypothetical protein A0R4D1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5861038 5861694 . + 0 MSMEG_5792 MSMEG_5792 conserved hypothetical protein A0R4D2 No unknown Rv0813c Rv0813c NC_008596.1 Mycobrowser_v3 CDS 5861703 5861984 . + 0 MSMEG_5793 MSMEG_5793 hypothetical protein identified by Glimmer2; putative A0R4D3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5862063 5862440 . + 0 MSMEG_5794 MSMEG_5794 hypothetical protein identified by Glimmer2; putative A0R4D4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5862693 5863562 . - 0 MSMEG_5795 MSMEG_5795 4-amino-4-deoxychorismate lyase A0R4D5 No unknown Rv0812 Rv0812 NC_008596.1 Mycobrowser_v3 CDS 5863663 5864742 . + 0 MSMEG_5796 MSMEG_5796 Glycine cleavage T-protein (aminomethyl transferase) identified by match to protein family HMM PF01571 A0R4D6 No unknown Rv0811c Rv0811c NC_008596.1 Mycobrowser_v3 CDS 5865007 5865180 . + 0 MSMEG_5797 MSMEG_5797 conserved hypothetical protein A0R4D7 No unknown Rv0810c Rv0810c NC_008596.1 Mycobrowser_v3 CDS 5949354 5949644 . + 0 MSMEG_5888 MSMEG_5888 conserved hypothetical protein A0R4M6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5865211 5866293 . - 0 MSMEG_5798 purM phosphoribosylformylglycinamidine cyclo-ligase identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878 A0R4D8 No unknown Rv0809 Rv0809 NC_008596.1 Mycobrowser_v3 CDS 5938086 5938424 . + 0 MSMEG_5876 MSMEG_5876 H-N-H endonuclease F-TflIV A0R4L3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5866339 5867736 . + 0 MSMEG_5799 MSMEG_5799 nucleoside-diphosphate-sugar epimerase identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368 A0R4D9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5867744 5869279 . - 0 MSMEG_5800 purF amidophosphoribosyltransferase identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134 A0R4E0 No unknown Rv0808 Rv0808 NC_008596.1 Mycobrowser_v3 CDS 5869361 5870710 . - 0 MSMEG_5801 MSMEG_5801 hydroxylase identified by match to protein family HMM PF01494 A0R4E1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5870893 5871624 . + 0 MSMEG_5802 MSMEG_5802 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0R4E2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5871708 5872067 . + 0 MSMEG_5803 MSMEG_5803 hypothetical protein identified by Glimmer2; putative A0R4E3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5872064 5872759 . + 0 MSMEG_5804 MSMEG_5804 conserved hypothetical protein A0R4E4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5872756 5872902 . + 0 MSMEG_5805 MSMEG_5805 hypothetical protein identified by Glimmer2; putative A0R4E5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5873134 5874081 . + 0 MSMEG_5807 MSMEG_5807 D-methionine transport ATP-binding protein MetN identified by match to protein family HMM PF00005 A0R4E7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5874133 5874816 . + 0 MSMEG_5808 MSMEG_5808 binding-protein-dependent transport systems inner membrane component identified by match to protein family HMM PF00528 A0R4E8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5874832 5875731 . + 0 MSMEG_5809 MSMEG_5809 lipoprotein YaeC, putative identified by match to protein family HMM PF03180 A0R4E9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5875728 5877137 . + 0 MSMEG_5810 MSMEG_5810 putative monooxygenase A0R4F0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5877168 5877794 . - 0 MSMEG_5811 MSMEG_5811 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R4F1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5949761 5950150 . + 0 MSMEG_5889 MSMEG_5889 conserved hypothetical protein A0R4M7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5878755 5879558 . + 0 MSMEG_5813 MSMEG_5813 carveol dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R4F3 No unknown NC_008596.1 Mycobrowser_v3 CDS 1108975 1110701 . + 0 MSMEG_1040 ctaD cytochrome C oxidase subunit I; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5879581 5880393 . + 0 MSMEG_5814 pcaC 4-carboxymuconolactone decarboxylase domain protein identified by match to protein family HMM PF02627 A0R4F4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5880390 5881853 . + 0 MSMEG_5815 MSMEG_5815 betaine aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0R4F5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5882145 5883410 . + 0 MSMEG_5816 MSMEG_5816 conserved hypothetical protein A0R4F6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5883420 5883806 . - 0 MSMEG_5817 MSMEG_5817 conserved hypothetical protein A0R4F7 No unknown Rv0807 Rv0807 NC_008596.1 Mycobrowser_v3 CDS 5883823 5885037 . + 0 MSMEG_5818 MSMEG_5818 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R4F8 No unknown Rv0589 Rv0589 NC_008596.1 Mycobrowser_v3 CDS 5885077 5885499 . + 0 MSMEG_5819 MSMEG_5819 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0R4F9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5885520 5885951 . + 0 MSMEG_5820 MSMEG_5820 hypothetical protein identified by Glimmer2; putative A0R4G0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5900103 5900858 . + 0 MSMEG_5834 MSMEG_5834 metallo-beta-lactamase superfamily protein identified by match to protein family HMM PF00753 A0R4H3 No unknown Rv0786c Rv0786c NC_008596.1 Mycobrowser_v3 CDS 5885977 5887236 . + 0 MSMEG_5822 MSMEG_5822 conserved hypothetical protein A0R4G1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5887175 5887831 . - 0 MSMEG_5821 MSMEG_5821 caax amino protease family protein identified by match to protein family HMM PF02517 A0R4G2 No unknown Rv0804 Rv0804 NC_008596.1 Mycobrowser_v3 CDS 5887831 5889561 . - 0 MSMEG_5823 MSMEG_5823 conserved membrane-spanning protein A0R4G3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5889558 5891855 . - 0 MSMEG_5824 purL phosphoribosylformylglycinamidine synthase II identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR01736 A0R4G4 No unknown Rv0803 Rv0803 NC_008596.1 Mycobrowser_v3 CDS 5891852 5893060 . - 0 MSMEG_5825 MSMEG_5825 Na+/H+ antiporter identified by match to protein family HMM PF00999 A0R4G5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5906984 5907883 . - 0 MSMEG_5841 purC phosphoribosylaminoimidazole-succinocarboxamide synthase identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081 A0R4I0 No unknown Rv0780 Rv0780 NC_008596.1 Mycobrowser_v3 CDS 5907914 5908537 . + 0 MSMEG_5842 MSMEG_5842 conserved hypothetical protein A0R4I1 No unknown Rv0779c Rv0779c NC_008596.1 Mycobrowser_v3 CDS 5892606 5894912 . + 0 MSMEG_5826 MSMEG_5826 pyruvate decarboxylase identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 A0R4G6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5894923 5895273 . - 0 MSMEG_5827 MSMEG_5827 glyoxalase family protein identified by match to protein family HMM PF00903 A0R4G7 No unknown Rv0801 Rv0801 NC_008596.1 Mycobrowser_v3 CDS 5895289 5896554 . - 0 MSMEG_5828 MSMEG_5828 aspartyl aminopeptidase identified by match to protein family HMM PF02127; match to protein family HMM PF05343 A0R4G8 No unknown Rv0800 Rv0800 NC_008596.1 Mycobrowser_v3 CDS 5896604 5897635 . + 0 MSMEG_5829 MSMEG_5829 Dyp-type peroxidase identified by match to protein family HMM PF04261; match to protein family HMM TIGR01413 A0R4G9 No unknown Rv0799c Rv0799c NC_008596.1 Mycobrowser_v3 CDS 5897635 5898432 . + 0 MSMEG_5830 MSMEG_5830 29 kda antigen Cfp29 identified by match to protein family HMM PF04454 A0R4H0 No unknown Rv0798c Rv0798c NC_008596.1 Mycobrowser_v3 CDS 5898597 5899271 . - 0 MSMEG_5831 purQ phosphoribosylformylglycinamidine synthase I identified by match to protein family HMM TIGR01737 A0R4H1 No unknown Rv0788 Rv0788 NC_008596.1 Mycobrowser_v3 CDS 5900871 5902514 . - 0 MSMEG_5835 MSMEG_5835 fumarate reductase/succinate dehydrogenase flavoprotein identified by match to protein family HMM PF00890; match to protein family HMM PF01266 A0R4H4 No unknown Rv0785 Rv0785 NC_008596.1 Mycobrowser_v3 CDS 5902536 5903252 . - 0 MSMEG_5836 MSMEG_5836 conserved hypothetical protein A0R4H5 No unknown Rv0784 Rv0784 NC_008596.1 Mycobrowser_v3 CDS 5903317 5903802 . - 0 MSMEG_5837 MSMEG_5837 glutathione peroxidase family protein identified by similarity to SP:P06610; match to protein family HMM PF00255 A0R4H6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5903822 5904367 . - 0 MSMEG_5838 MSMEG_5838 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0R4H7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5904456 5904905 . + 0 MSMEG_5840 MSMEG_5840 conserved hypothetical protein A0R4H8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5904831 5906987 . - 0 MSMEG_5839 MSMEG_5839 protease 2 identified by match to protein family HMM PF00326; match to protein family HMM PF02897 A0R4H9 No unknown Rv0782 Rv0782 NC_008596.1 Mycobrowser_v3 CDS 5909473 5910120 . - 0 MSMEG_5843 MSMEG_5843 conserved hypothetical protein identified by match to protein family HMM PF08044 A0R4I3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5910084 5911016 . - 0 MSMEG_5845 MSMEG_5845 putative C4-dicarboxylate transporter A0R4I4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5910956 5912161 . - 0 MSMEG_5846 MSMEG_5846 NikQ protein identified by match to protein family HMM PF00067 A0R4I5 No unknown Rv0778 Rv0778 NC_008596.1 Mycobrowser_v3 CDS 5912178 5913602 . - 0 MSMEG_5847 purB adenylosuccinate lyase identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928 A0R4I6 No unknown Rv0777 Rv0777 NC_008596.1 Mycobrowser_v3 CDS 5913636 5915339 . + 0 MSMEG_5849 MSMEG_5849 conserved hypothetical protein identified by match to protein family HMM PF04607 A0R4I7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5915336 5916760 . - 0 MSMEG_5848 MSMEG_5848 amino acid permease-associated region identified by match to protein family HMM PF00324 A0R4I8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5916780 5917400 . - 0 MSMEG_5850 MSMEG_5850 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R4I9 No unknown Rv0775 Rv0775 NC_008596.1 Mycobrowser_v3 CDS 5988883 5989782 . - 0 MSMEG_5929 MSMEG_5929 conserved hypothetical protein A0R4R7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5917517 5918410 . + 0 MSMEG_5851 MSMEG_5851 putative esterase superfamily protein identified by match to protein family HMM PF00756 A0R4J0 No unknown Rv0774c Rv0774c NC_008596.1 Mycobrowser_v3 CDS 5918416 5919597 . - 0 MSMEG_5852 purD phosphoribosylamine--glycine ligase identified by match to protein family HMM PF01071; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877 A0R4J1 No unknown Rv0772 Rv0772 NC_008596.1 Mycobrowser_v3 CDS 5919783 5921018 . + 0 MSMEG_5853 MSMEG_5853 cytochrome P450 identified by match to protein family HMM PF00067 A0R4J2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5950199 5950363 . + 0 MSMEG_5890 MSMEG_5890 conserved hypothetical protein A0R4M8 No unknown Rv3489 Rv3489 NC_008596.1 Mycobrowser_v3 CDS 5921730 5922956 . - 0 MSMEG_5855 MSMEG_5855 conserved hypothetical protein A0R4J4 No unknown Rv0311 Rv0311 NC_008596.1 Mycobrowser_v3 CDS 5922946 5923401 . - 0 MSMEG_5856 pcaC 4-carboxymuconolactone decarboxylase domain protein identified by match to protein family HMM PF02627 A0R4J5 No unknown Rv0771 Rv0771 NC_008596.1 Mycobrowser_v3 CDS 5923404 5924258 . - 0 MSMEG_5857 MSMEG_5857 putative oxidoreductase identified by match to protein family HMM PF03446; match to protein family HMM PF03721 A0R4J6 No unknown Rv0770 Rv0770 NC_008596.1 Mycobrowser_v3 CDS 5924255 5925019 . - 0 MSMEG_5858 MSMEG_5858 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106 A0R4J7 No unknown Rv0769 Rv0769 NC_008596.1 Mycobrowser_v3 CDS 5925031 5926500 . - 0 MSMEG_5859 MSMEG_5859 aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 A0R4J8 No unknown Rv0768 Rv0768 NC_008596.1 Mycobrowser_v3 CDS 5926686 5927285 . + 0 MSMEG_5860 MSMEG_5860 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R4J9 No unknown Rv0767c Rv0767c NC_008596.1 Mycobrowser_v3 CDS 5927282 5928484 . + 0 MSMEG_5861 MSMEG_5861 cytochrome P450 109 identified by match to protein family HMM PF00067 A0R4K0 No unknown Rv0766c Rv0766c NC_008596.1 Mycobrowser_v3 CDS 5928485 5929312 . + 0 MSMEG_5862 MSMEG_5862 short chain dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R4K1 No unknown Rv0765c Rv0765c NC_008596.1 Mycobrowser_v3 CDS 5929309 5930664 . + 0 MSMEG_5863 MSMEG_5863 cytochrome P450 51 identified by match to protein family HMM PF00067 A0R4K2 No unknown Rv0764c Rv0764c NC_008596.1 Mycobrowser_v3 CDS 5930669 5930872 . + 0 MSMEG_5864 MSMEG_5864 cytochrome P450 51 A0R4K3 No unknown Rv0763c Rv0763c NC_008596.1 Mycobrowser_v3 CDS 5930884 5931423 . + 0 MSMEG_5865 MSMEG_5865 conserved hypothetical protein A0R4K4 No unknown Rv0762c Rv0762c NC_008596.1 Mycobrowser_v3 CDS 5931523 5932650 . + 0 MSMEG_5866 MSMEG_5866 alcohol dehydrogenase B identified by match to protein family HMM PF00107 A0R4K5 No unknown Rv0761c Rv0761c NC_008596.1 Mycobrowser_v3 CDS 5932661 5933098 . + 0 MSMEG_5867 MSMEG_5867 nuclear transport factor 2 (NTF2) domain superfamily protein identified by match to protein family HMM PF02136 A0R4K6 No unknown Rv0760c Rv0760c NC_008596.1 Mycobrowser_v3 CDS 5933124 5933951 . + 0 MSMEG_5869 MSMEG_5869 putative short chain dehydrogenase identified by match to protein family HMM PF00106 A0R4K7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5933938 5934246 . - 0 MSMEG_5868 MSMEG_5868 hypothetical protein identified by Glimmer2; putative A0R4K8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5934342 5934770 . + 0 MSMEG_5871 MSMEG_5871 HIT family protein identified by match to protein family HMM PF01230 A0R4K9 No unknown Rv0759c Rv0759c NC_008596.1 Mycobrowser_v3 CDS 5934730 5936157 . - 0 MSMEG_5870 MSMEG_5870 sensor histidine kinase PhoR identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 A0R4L0 No unknown Rv0758 Rv0758 NC_008596.1 Mycobrowser_v3 CDS 5936199 5936918 . - 0 MSMEG_5872 phoP DNA-binding response regulator PhoP identified by match to protein family HMM PF00072; match to protein family HMM PF00486 A0R4L1 No unknown Rv0757 Rv0757 NC_008596.1 Mycobrowser_v3 CDS 5937058 5937876 . + 0 MSMEG_5873 MSMEG_5873 conserved hypothetical protein A0R4L2 No unknown Rv0756c Rv0756c NC_008596.1 Mycobrowser_v3 CDS 5938617 5939687 . - 0 MSMEG_5877 MSMEG_5877 conserved hypothetical protein A0R4L5 No unknown Rv3096 Rv3096 NC_008596.1 Mycobrowser_v3 tRNA 5937904 5937978 . + 0 MSMEG_5874 MSMEG_5874 tRNA-Thr No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 5939853 5940551 . - 0 MSMEG_5878 MSMEG_5878 serine esterase, cutinase family protein identified by match to protein family HMM PF01083 A0R4L6 No unknown Rv3724B Rv3724B NC_008596.1 Mycobrowser_v3 CDS 5940642 5941298 . - 0 MSMEG_5879 MSMEG_5879 D-alanyl-D-alanine dipeptidase identified by match to protein family HMM PF01427 A0R4L7 No unknown Rv0838 Rv0838 NC_008596.1 Mycobrowser_v3 CDS 5941399 5943753 . + 0 MSMEG_5880 MSMEG_5880 nicotine dehydrogenase identified by match to protein family HMM PF01315; match to protein family HMM PF02738 A0R4L8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5943756 5944466 . + 0 MSMEG_5881 MSMEG_5881 putative carbon monoxide dehydrogenase subunit G identified by match to protein family HMM PF06240 A0R4L9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5944463 5945350 . + 0 MSMEG_5882 MSMEG_5882 carbon monoxide dehydrogenase medium chain identified by match to protein family HMM PF00941; match to protein family HMM PF03450 A0R4M0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5945343 5945855 . + 0 MSMEG_5883 MSMEG_5883 [2Fe-2S] binding domain protein identified by match to protein family HMM PF00111; match to protein family HMM PF01799 A0R4M1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5945888 5946787 . + 0 MSMEG_5884 MSMEG_5884 3-hydroxyisobutyrate dehydrogenase family protein identified by match to protein family HMM PF03446; match to protein family HMM PF03807 A0R4M2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5946791 5947627 . - 0 MSMEG_5885 MSMEG_5885 short chain dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R4M3 No unknown Rv3485c Rv3485c NC_008596.1 Mycobrowser_v3 CDS 5947663 5948610 . - 0 MSMEG_5886 MSMEG_5886 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R4M4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5948845 5949216 . + 0 MSMEG_5887 MSMEG_5887 intersectin-EH binding protein Ibp1 A0R4M5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5950364 5951875 . + 0 MSMEG_5892 MSMEG_5892 alpha,alpha-trehalose-phosphate synthase (UDP-forming) identified by match to protein family HMM PF00982 A0R4M9 No unknown Rv3490 Rv3490 NC_008596.1 Mycobrowser_v3 CDS 6251411 6251920 . + 0 MSMEG_6182 MSMEG_6182 conserved hypothetical protein identified by match to protein family HMM PF07332 A0R5G4 No unknown Rv3669 Rv3669 NC_008596.1 Mycobrowser_v3 CDS 5951872 5952933 . - 0 MSMEG_5891 MSMEG_5891 ISMsm5, transposase identified by similarity to GB:CAD18826.1 A0R4N0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5952977 5953462 . - 0 MSMEG_5893 MSMEG_5893 conserved hypothetical protein A0R4N1 No unknown Rv3492c Rv3492c NC_008596.1 Mycobrowser_v3 CDS 5953462 5954094 . - 0 MSMEG_5894 MSMEG_5894 conserved hypothetical protein A0R4N2 No unknown Rv3493c Rv3493c NC_008596.1 Mycobrowser_v3 CDS 5954163 5955857 . - 0 MSMEG_5895 MSMEG_5895 virulence factor mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R4N3 No unknown Rv3494c Rv3494c NC_008596.1 Mycobrowser_v3 CDS 5955858 5957006 . - 0 MSMEG_5896 MSMEG_5896 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R4N4 No unknown Rv3495c Rv3495c NC_008596.1 Mycobrowser_v3 CDS 5957066 5958430 . - 0 MSMEG_5897 MSMEG_5897 virulence factor mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R4N5 No unknown Rv3496c Rv3496c NC_008596.1 Mycobrowser_v3 CDS 5958427 5959485 . - 0 MSMEG_5898 MSMEG_5898 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R4N6 No unknown Rv3497c Rv3497c NC_008596.1 Mycobrowser_v3 CDS 5959478 5960512 . - 0 MSMEG_5899 MSMEG_5899 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R4N7 No unknown Rv3498c Rv3498c NC_008596.1 Mycobrowser_v3 CDS 5960513 5961715 . - 0 MSMEG_5900 MSMEG_5900 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R4N8 No unknown Rv3499c Rv3499c NC_008596.1 Mycobrowser_v3 CDS 5961722 5962585 . - 0 MSMEG_5901 MSMEG_5901 TrnB2 protein identified by match to protein family HMM PF02405 A0R4N9 No unknown Rv3500c Rv3500c NC_008596.1 Mycobrowser_v3 CDS 5962620 5963384 . - 0 MSMEG_5902 MSMEG_5902 conserved hypothetical protein identified by match to protein family HMM PF02405 A0R4P0 No unknown Rv3501c Rv3501c NC_008596.1 Mycobrowser_v3 CDS 5963654 5964604 . - 0 MSMEG_5903 MSMEG_5903 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0R4P1 No unknown Rv3502c Rv3502c NC_008596.1 Mycobrowser_v3 CDS 5964647 5964838 . - 0 MSMEG_5904 MSMEG_5904 conserved domain protein A0R4P2 No unknown Rv3503c Rv3503c NC_008596.1 Mycobrowser_v3 CDS 5965003 5966181 . + 0 MSMEG_5906 MSMEG_5906 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771 A0R4P4 No unknown Rv3504 Rv3504 NC_008596.1 Mycobrowser_v3 CDS 5966201 5967298 . + 0 MSMEG_5907 MSMEG_5907 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0R4P5 No unknown Rv3505 Rv3505 NC_008596.1 Mycobrowser_v3 CDS 5967301 5968845 . + 0 MSMEG_5908 MSMEG_5908 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R4P6 No unknown Rv3506 Rv3506 NC_008596.1 Mycobrowser_v3 CDS 5968842 5969831 . + 0 MSMEG_5909 MSMEG_5909 oxidoreductase identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993 A0R4P7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5969786 5970586 . + 0 MSMEG_5911 MSMEG_5911 AraC family protein transcriptional regulator A0R4P8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5970523 5970918 . - 0 MSMEG_5910 MSMEG_5910 quinone binding protein identified by match to protein family HMM PF00903 A0R4P9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5971046 5972599 . + 0 MSMEG_5912 MSMEG_5912 succinic semialdehyde dehydrogenase identified by match to protein family HMM PF00171 A0R4Q0 No unknown Rv1731 Rv1731 NC_008596.1 Mycobrowser_v3 CDS 5972603 5973724 . - 0 MSMEG_5913 MSMEG_5913 dioxygenase identified by match to protein family HMM PF03060 A0R4Q1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5973735 5975390 . - 0 MSMEG_5914 MSMEG_5914 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R4Q2 No unknown Rv3515c Rv3515c NC_008596.1 Mycobrowser_v3 CDS 5975459 5976259 . + 0 MSMEG_5915 MSMEG_5915 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R4Q3 No unknown Rv3516 Rv3516 NC_008596.1 Mycobrowser_v3 CDS 5976314 5976595 . - 0 MSMEG_5916 MSMEG_5916 hypothetical protein identified by Glimmer2; putative A0R4Q4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5976871 5977719 . + 0 MSMEG_5917 MSMEG_5917 conserved hypothetical protein A0R4Q5 No unknown Rv3517 Rv3517 NC_008596.1 Mycobrowser_v3 CDS 5977791 5978996 . - 0 MSMEG_5918 MSMEG_5918 P450 heme-thiolate protein identified by match to protein family HMM PF00067 A0R4Q6 No unknown Rv3518c Rv3518c NC_008596.1 Mycobrowser_v3 CDS 5978993 5979709 . - 0 MSMEG_5919 MSMEG_5919 conserved hypothetical protein A0R4Q7 No unknown Rv3519 Rv3519 NC_008596.1 Mycobrowser_v3 CDS 1123863 1124689 . - 0 MSMEG_1056 MSMEG_1056 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5979753 5980784 . - 0 MSMEG_5920 MSMEG_5920 FMN-dependent monooxygenase identified by match to protein family HMM PF00296 A0R4Q8 No unknown Rv3520c Rv3520c NC_008596.1 Mycobrowser_v3 CDS 5980944 5981846 . + 0 MSMEG_5921 MSMEG_5921 conserved hypothetical protein identified by match to protein family HMM PF01796 A0R4Q9 No unknown Rv3521 Rv3521 NC_008596.1 Mycobrowser_v3 CDS 5981886 5982929 . + 0 MSMEG_5922 MSMEG_5922 lipid-transfer protein A0R4R0 No unknown Rv3522 Rv3522 NC_008596.1 Mycobrowser_v3 CDS 5982929 5984107 . + 0 MSMEG_5923 MSMEG_5923 acetyl-CoA acetyltransferase A0R4R1 No unknown Rv3523 Rv3523 NC_008596.1 Mycobrowser_v3 CDS 5984266 5984898 . + 0 MSMEG_5924 MSMEG_5924 conserved hypothetical protein A0R4R2 No unknown NC_008596.1 Mycobrowser_v3 CDS 5985003 5986154 . + 0 MSMEG_5925 MSMEG_5925 Rieske [2Fe-2S] domain protein identified by match to protein family HMM PF00355 A0R4R3 No unknown Rv3526 Rv3526 NC_008596.1 Mycobrowser_v3 CDS 5986154 5986630 . + 0 MSMEG_5927 MSMEG_5927 conserved hypothetical protein A0R4R4 No unknown Rv3527 Rv3527 NC_008596.1 Mycobrowser_v3 CDS 5986627 5988120 . - 0 MSMEG_5926 MSMEG_5926 putative secreted protein A0R4R5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5988156 5988833 . - 0 MSMEG_5928 MSMEG_5928 conserved hypothetical protein A0R4R6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5211158 5211895 . - 0 MSMEG_5110 MSMEG_5110 sulfatase; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5989939 5991066 . - 0 MSMEG_5930 MSMEG_5930 conserved hypothetical protein A0R4R8 No unknown Rv3529c Rv3529c NC_008596.1 Mycobrowser_v3 CDS 5991078 5991860 . - 0 MSMEG_5931 MSMEG_5931 short chain dehydrogenase identified by match to protein family HMM PF00106 A0R4R9 No unknown Rv3530c Rv3530c NC_008596.1 Mycobrowser_v3 CDS 5991863 5992990 . - 0 MSMEG_5932 MSMEG_5932 conserved hypothetical protein A0R4S0 No unknown Rv3531c Rv3531c NC_008596.1 Mycobrowser_v3 CDS 5993104 5994012 . + 0 MSMEG_5933 MSMEG_5933 conserved hypothetical protein A0R4S1 No unknown NC_008596.1 Mycobrowser_v3 CDS 5994025 5994357 . - 0 MSMEG_5934 MSMEG_5934 conserved hypothetical protein A0R4S2 No unknown Rv1174c Rv1174c NC_008596.1 Mycobrowser_v3 CDS 6010413 6011549 . - 0 MSMEG_5949 MSMEG_5949 conserved hypothetical protein A0R4T7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6012352 6013476 . + 0 MSMEG_5951 MSMEG_5951 glycosyl transferase, group 1, putative identified by match to protein family HMM PF00534 A0R4T9 No unknown NC_008596.1 Mycobrowser_v3 CDS 5994502 5996577 . - 0 MSMEG_5935 MSMEG_5935 ATP-dependent DNA helicase identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614 A0R4S3 No unknown NC_008596.1 Mycobrowser_v3 CDS 5996576 5997187 . + 0 MSMEG_5938 MSMEG_5938 hypothetical protein identified by Glimmer2; putative A0R4S4 No unknown NC_008596.1 Mycobrowser_v3 CDS 5996684 5997067 . - 0 MSMEG_5936 MSMEG_5936 conserved hypothetical protein A0R4S5 No unknown NC_008596.1 Mycobrowser_v3 CDS 5997153 5998202 . - 0 MSMEG_5937 MSMEG_5937 4-hydroxy-2-oxovalerate aldolase identified by match to protein family HMM PF00682; match to protein family HMM PF07836 A0R4S6 No unknown Rv3534c Rv3534c NC_008596.1 Mycobrowser_v3 CDS 5998199 5999164 . - 0 MSMEG_5939 MSMEG_5939 acetaldehyde dehydrogenase identified by match to protein family HMM PF01118 A0R4S7 No unknown Rv3535c Rv3535c NC_008596.1 Mycobrowser_v3 CDS 5999161 5999946 . - 0 MSMEG_5940 MSMEG_5940 2-keto-4-pentenoate hydratase identified by match to protein family HMM PF01689 A0R4S8 No unknown Rv3536c Rv3536c NC_008596.1 Mycobrowser_v3 CDS 6001722 6002582 . + 0 MSMEG_5943 MSMEG_5943 putative peroxisomal multifunctional enzyme type 2 identified by match to protein family HMM PF01575 A0R4T0 No unknown Rv3538 Rv3538 NC_008596.1 Mycobrowser_v3 CDS 6020161 6021429 . + 0 MSMEG_5960 MSMEG_5960 O-antigen polymerase, putative identified by match to protein family HMM PF04932 A0R4U7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6002532 6005153 . - 0 MSMEG_5942 MSMEG_5942 AMP-dependent synthetase and ligase identified by match to protein family HMM PF00501 A0R4T1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6005369 6006970 . + 0 MSMEG_5944 MSMEG_5944 glucose-methanol-choline oxidoreductase identified by match to protein family HMM PF00732; match to protein family HMM PF01266 A0R4T2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6007005 6007583 . + 0 MSMEG_5945 MSMEG_5945 conserved hypothetical protein identified by match to protein family HMM PF02698 A0R4T3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6007711 6008229 . + 0 MSMEG_5947 cysE serine O-acetyltransferase A0R4T4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6008195 6009514 . - 0 MSMEG_5946 MSMEG_5946 hypothetical protein identified by Glimmer2; putative A0R4T5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6009511 6010416 . - 0 MSMEG_5948 MSMEG_5948 glycosyl transferase identified by match to protein family HMM PF00535 A0R4T6 No unknown NC_008596.1 Mycobrowser_v3 CDS 1151224 1152904 . + 0 MSMEG_1087 MSMEG_1087 oligopeptide ABC transporter ATP-binding protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00005 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6013473 6014132 . + 0 MSMEG_5952 MSMEG_5952 conserved hypothetical protein, putative identified by match to protein family HMM PF00657 A0R4U0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6014129 6014881 . + 0 MSMEG_5953 MSMEG_5953 hypothetical protein identified by Glimmer2; putative A0R4U1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6014893 6015528 . + 0 MSMEG_5954 MSMEG_5954 cell surface polysaccharide biosynthesis, putative identified by match to protein family HMM PF02706 A0R4U2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6015525 6016190 . + 0 MSMEG_5955 MSMEG_5955 protein-tyrosine kinase, putative identified by match to protein family HMM PF02706 A0R4U3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6016202 6017173 . - 0 MSMEG_5956 MSMEG_5956 NAD dependent epimerase/dehydratase family protein identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 A0R4U4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6017397 6018887 . - 0 MSMEG_5957 algD GDP-mannose 6-dehydrogenase AlgD identified by similarity to SP:O07299; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 A0R4U5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6019278 6020018 . + 0 MSMEG_5958 MSMEG_5958 hypothetical protein identified by Glimmer2; putative A0R4U6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6021392 6022453 . - 0 MSMEG_5959 MSMEG_5959 conserved hypothetical protein A0R4U8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6064064 6064543 . + 0 MSMEG_5998 MSMEG_5998 conserved hypothetical protein identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0R4Y6 No unknown Rv3547 Rv3547 NC_008596.1 Mycobrowser_v3 CDS 6022498 6023439 . - 0 MSMEG_5961 MSMEG_5961 glycosyl transferase, group 2 family protein, putative identified by match to protein family HMM PF00535 A0R4U9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6023439 6024206 . - 0 MSMEG_5962 MSMEG_5962 glycosyl transferase, family protein 2 identified by match to protein family HMM PF01522 A0R4V0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6041185 6042213 . - 0 MSMEG_5976 MSMEG_5976 epimerase/dehydratase identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993 A0R4W5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6024203 6026290 . - 0 MSMEG_5963 MSMEG_5963 glycosyl transferase, family protein 2 identified by match to protein family HMM PF00535 A0R4V1 No unknown NC_008596.1 Mycobrowser_v3 CDS 4041018 4043049 . - 0 MSMEG_3974 MSMEG_3974 hydantoin utilization protein A; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF05378 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6026548 6027831 . - 0 MSMEG_5964 MSMEG_5964 glycosyl transferase, group 1, putative identified by match to protein family HMM PF00534 A0R4V2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6028304 6029836 . + 0 MSMEG_5965 MSMEG_5965 hypothetical protein identified by Glimmer2; putative A0R4V3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6029863 6030627 . - 0 MSMEG_5966 MSMEG_5966 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0R4V4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6030680 6032335 . - 0 MSMEG_5967 MSMEG_5967 glucose-methanol-choline oxidoreductase identified by match to protein family HMM PF00732; match to protein family HMM PF01266; match to protein family HMM PF05199 A0R4V5 No unknown Rv0492c Rv0492c NC_008596.1 Mycobrowser_v3 CDS 6032735 6034267 . - 0 MSMEG_5968 MSMEG_5968 polysaccharide biosynthesis protein identified by match to protein family HMM PF01943 A0R4V6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6034371 6035585 . - 0 MSMEG_5969 MSMEG_5969 conserved hypothetical protein A0R4V7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6065542 6066324 . - 0 MSMEG_6000 MSMEG_6000 short chain dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R4Y8 No unknown Rv3549c Rv3549c NC_008596.1 Mycobrowser_v3 CDS 6035857 6037233 . + 0 MSMEG_5970 MSMEG_5970 probable glutamate-1-semialdehyde 2,1-aminomutase identified by match to protein family HMM PF00202 A0R4V8,A4ZHT7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6037508 6037984 . + 0 MSMEG_5971 MSMEG_5971 conserved hypothetical protein A0R4V9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6038034 6038726 . - 0 MSMEG_5972 MSMEG_5972 hypothetical protein identified by Glimmer2; putative A0R4W0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6038769 6038999 . + 0 MSMEG_5973 MSMEG_5973 hypothetical protein identified by Glimmer2; putative A0R4W1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6039284 6039442 . + 0 MSMEG_5974 MSMEG_5974 hypothetical protein identified by Glimmer2; putative A0R4W2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6039559 6040632 . - 0 MSMEG_5975 MSMEG_5975 methyltransferase type 12, putative A0R4W3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6040647 6041201 . + 0 MSMEG_5977 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase identified by match to protein family HMM PF00908; match to protein family HMM TIGR01221 A0R4W4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6042243 6042911 . - 0 MSMEG_5978 MSMEG_5978 GlcNAc-PI de-N-acetylase family protein identified by match to protein family HMM PF02585 A0R4W6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6042908 6043708 . - 0 MSMEG_5979 MSMEG_5979 transferase A0R4W7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6043705 6044961 . - 0 MSMEG_5980 MSMEG_5980 methyltransferase A0R4W8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6044958 6045992 . - 0 MSMEG_5981 MSMEG_5981 glycosyl transferase, putative identified by match to protein family HMM PF04101 A0R4W9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6046007 6047368 . - 0 MSMEG_5982 MSMEG_5982 UDP-glucose 6-dehydrogenase identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 A0R4X0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6047365 6048243 . - 0 MSMEG_5983 rfbA glucose-1-phosphate thymidylyltransferase identified by match to protein family HMM PF00483; match to protein family HMM TIGR01207 A0R4X1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6048253 6049809 . - 0 MSMEG_5984 MSMEG_5984 undecaprenyl-phosphate galactosephosphotransferase identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025 A0R4X2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6064621 6065526 . - 0 MSMEG_5999 MSMEG_5999 short chain dehydrogenase identified by match to protein family HMM PF00106 A0R4Y7 No unknown Rv3548c Rv3548c NC_008596.1 Mycobrowser_v3 CDS 6049806 6050765 . - 0 MSMEG_5985 MSMEG_5985 NAD dependent epimerase/dehydratase family protein identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 A0R4X3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6050802 6052589 . - 0 MSMEG_5986 glmS glucosamine--fructose-6-phosphate aminotransferase, isomerizing identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135 A0R4X4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6052909 6053826 . - 0 MSMEG_5987 MSMEG_5987 two-component regulator identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0R4X5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6054384 6055199 . - 0 MSMEG_5988 MSMEG_5988 hypothetical protein identified by Glimmer2; putative A0R4X6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6055221 6056327 . - 0 MSMEG_5989 MSMEG_5989 hypothetical protein identified by Glimmer2; putative A0R4X7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6056400 6057563 . - 0 MSMEG_5990 MSMEG_5990 lipid-transfer protein A0R4X8 No unknown Rv3540c Rv3540c NC_008596.1 Mycobrowser_v3 CDS 6057560 6057973 . - 0 MSMEG_5991 MSMEG_5991 MaoC like domain, putative identified by match to protein family HMM PF01575 A0R4X9 No unknown Rv3541c Rv3541c NC_008596.1 Mycobrowser_v3 CDS 6057955 6058920 . - 0 MSMEG_5992 MSMEG_5992 conserved hypothetical protein identified by match to protein family HMM PF01796 A0R4Y0 No unknown Rv3542c Rv3542c NC_008596.1 Mycobrowser_v3 CDS 6058917 6060080 . - 0 MSMEG_5993 MSMEG_5993 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771 A0R4Y1 No unknown Rv3543c Rv3543c NC_008596.1 Mycobrowser_v3 CDS 6060080 6061084 . - 0 MSMEG_5994 MSMEG_5994 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0R4Y2 No unknown Rv3544c Rv3544c NC_008596.1 Mycobrowser_v3 CDS 6061103 6062386 . - 0 MSMEG_5995 MSMEG_5995 P450 heme-thiolate protein identified by match to protein family HMM PF00067 A0R4Y3 No unknown Rv3545c Rv3545c NC_008596.1 Mycobrowser_v3 CDS 6062510 6063673 . + 0 MSMEG_5996 MSMEG_5996 acetyl-CoA acetyltransferase identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 A0R4Y4 No unknown Rv3546 Rv3546 NC_008596.1 Mycobrowser_v3 CDS 6063676 6064056 . + 0 MSMEG_5997 MSMEG_5997 conserved hypothetical protein A0R4Y5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6080716 6081651 . + 0 MSMEG_6016 MSMEG_6016 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF08028 A0R502 No unknown Rv3564 Rv3564 NC_008596.1 Mycobrowser_v3 CDS 6081669 6082838 . + 0 MSMEG_6017 MSMEG_6017 aminotransferase, class I identified by match to protein family HMM PF00155 A0R503 No unknown Rv3565 Rv3565 NC_008596.1 Mycobrowser_v3 CDS 6082847 6084166 . - 0 MSMEG_6018 MSMEG_6018 xylose transport system permease protein XylH identified by match to protein family HMM PF02653 A0R504 No unknown NC_008596.1 Mycobrowser_v3 CDS 6084175 6084954 . - 0 MSMEG_6019 MSMEG_6019 ABC-type sugar transport system ATPase component identified by match to protein family HMM PF00005 A0R505 No unknown NC_008596.1 Mycobrowser_v3 CDS 6084958 6086037 . - 0 MSMEG_6020 MSMEG_6020 D-xylose-binding periplasmic protein A0R506 No unknown NC_008596.1 Mycobrowser_v3 CDS 6086090 6087313 . - 0 MSMEG_6021 xylA xylose isomerase identified by match to protein family HMM PF01261; match to protein family HMM TIGR02631 A0R507 No unknown NC_008596.1 Mycobrowser_v3 CDS 6102657 6103556 . - 0 MSMEG_6036 MSMEG_6036 biphenyl-2,3-diol 1,2-dioxygenase identified by match to protein family HMM PF00903 A0R522 No unknown Rv3568c Rv3568c NC_008596.1 Mycobrowser_v3 CDS 6087420 6088601 . + 0 MSMEG_6022 MSMEG_6022 xylose repressor, ROK-family protein transcriptional regulator identified by match to protein family HMM PF00480 A0R508 No unknown NC_008596.1 Mycobrowser_v3 CDS 6088633 6089832 . - 0 MSMEG_6023 MSMEG_6023 transposase identified by match to protein family HMM PF01548; match to protein family HMM PF02371 A0R509 No unknown NC_008596.1 Mycobrowser_v3 CDS 6090096 6091412 . + 0 MSMEG_6025 MSMEG_6025 conserved hypothetical protein A0R510 No unknown Rv1378c,Rv3074 Rv1378c,Rv3074 NC_008596.1 Mycobrowser_v3 CDS 6091393 6093327 . - 0 MSMEG_6024 MSMEG_6024 acetoacetyl-CoA synthase identified by match to protein family HMM PF00501; match to protein family HMM TIGR01217 A0R511 No unknown NC_008596.1 Mycobrowser_v3 CDS 6093324 6094070 . - 0 MSMEG_6026 MSMEG_6026 3-hydroxybutyrate dehydrogenase identified by match to protein family HMM PF00106; match to protein family HMM TIGR01963 A0R512 No unknown NC_008596.1 Mycobrowser_v3 CDS 6124745 6125368 . + 0 MSMEG_6057 MSMEG_6057 MspD protein A0R541 No unknown NC_008596.1 Mycobrowser_v3 CDS 6094067 6095395 . - 0 MSMEG_6027 MSMEG_6027 major facilitator superfamily protein MFS_1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0R513 No unknown NC_008596.1 Mycobrowser_v3 CDS 6127628 6127912 . - 0 MSMEG_6059 MSMEG_6059 conserved hypothetical protein A0R543 No unknown Rv0968,Rv1993c Rv0968,Rv1993c NC_008596.1 Mycobrowser_v3 CDS 6095547 6096458 . + 0 MSMEG_6028 MSMEG_6028 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R514 No unknown NC_008596.1 Mycobrowser_v3 CDS 6096471 6097322 . + 0 MSMEG_6029 MSMEG_6029 conserved hypothetical protein A0R515 No unknown NC_008596.1 Mycobrowser_v3 CDS 6097336 6098625 . - 0 MSMEG_6030 MSMEG_6030 cytochrome p450 identified by match to protein family HMM PF00067 A0R516 No unknown NC_008596.1 Mycobrowser_v3 CDS 6098766 6099374 . + 0 MSMEG_6032 MSMEG_6032 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R517 No unknown NC_008596.1 Mycobrowser_v3 CDS 6099367 6100206 . - 0 MSMEG_6031 MSMEG_6031 carveol dehydrogenase identified by match to protein family HMM PF00106 A0R518 No unknown NC_008596.1 Mycobrowser_v3 CDS 6100369 6101910 . - 0 MSMEG_6033 MSMEG_6033 hypothetical protein identified by Glimmer2; putative A0R519 No unknown NC_008596.1 Mycobrowser_v3 CDS 6101788 6101937 . + 0 MSMEG_6034 MSMEG_6034 hypothetical protein identified by Glimmer2; putative A0R520 No unknown NC_008596.1 Mycobrowser_v3 CDS 6133305 6133469 . - 0 MSMEG_6067 rpmG ribosomal protein L33 identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023 A0R551 No unknown Rv2057c Rv2057c NC_008596.1 Mycobrowser_v3 CDS 6103557 6104435 . - 0 MSMEG_6037 MSMEG_6037 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase identified by match to protein family HMM PF00561 A0R523 No unknown Rv3569c Rv3569c NC_008596.1 Mycobrowser_v3 CDS 6104435 6105625 . - 0 MSMEG_6038 MSMEG_6038 pigment production hydroxylase identified by match to protein family HMM PF08028 A0R524 No unknown Rv3570c Rv3570c NC_008596.1 Mycobrowser_v3 CDS 6105785 6106846 . + 0 MSMEG_6039 MSMEG_6039 oxidoreductase, electron transfer component identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970 A0R525 No unknown Rv3571 Rv3571 NC_008596.1 Mycobrowser_v3 CDS 6106889 6107464 . + 0 MSMEG_6040 MSMEG_6040 conserved hypothetical protein A0R526 No unknown Rv3572 Rv3572 NC_008596.1 Mycobrowser_v3 CDS 6121140 6121799 . + 0 MSMEG_6053 bluB cob(II)yrinic acid a,c-diamide reductase identified by match to protein family HMM PF00881; match to protein family HMM TIGR02476 A0R538 No unknown Rv0306 Rv0306 NC_008596.1 Mycobrowser_v3 CDS 6107545 6109689 . - 0 MSMEG_6041 MSMEG_6041 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0R527 No unknown Rv3573c Rv3573c NC_008596.1 Mycobrowser_v3 CDS 6109952 6110566 . + 0 MSMEG_6042 MSMEG_6042 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R528 No unknown Rv3574 Rv3574 NC_008596.1 Mycobrowser_v3 CDS 6110570 6111319 . + 0 MSMEG_6043 otsB trehalose-phosphatase identified by match to protein family HMM PF02358; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484 A0R529 No unknown NC_008596.1 Mycobrowser_v3 CDS 6111320 6112420 . - 0 MSMEG_6044 MSMEG_6044 periplasmic binding proteins and sugar binding domain of the LacI family protein, putative identified by match to protein family HMM PF00532 A0R530 No unknown Rv3575c Rv3575c NC_008596.1 Mycobrowser_v3 CDS 6112469 6113341 . - 0 MSMEG_6045 MSMEG_6045 ABC heavy metal transporter, inner membrane subunit identified by match to protein family HMM PF00950 A0R531 No unknown NC_008596.1 Mycobrowser_v3 CDS 6113341 6114120 . - 0 MSMEG_6046 MSMEG_6046 cation ABC transporter, ATP-binding protein, putative identified by match to protein family HMM PF00005 A0R532 No unknown NC_008596.1 Mycobrowser_v3 CDS 6114107 6115072 . - 0 MSMEG_6047 MSMEG_6047 cation ABC transporter, periplasmic cation-binding protein, putative identified by match to protein family HMM PF01297 A0R533 No unknown NC_008596.1 Mycobrowser_v3 CDS 6133469 6133705 . - 0 MSMEG_6068 rpmB ribosomal protein L28 identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009 A0R552 No unknown Rv2058c Rv2058c NC_008596.1 Mycobrowser_v3 CDS 6115172 6116308 . + 0 MSMEG_6048 MSMEG_6048 cobalamin synthesis protein/P47K identified by match to protein family HMM PF02492; match to protein family HMM PF07683 A0R534 No unknown NC_008596.1 Mycobrowser_v3 CDS 6134990 6135238 . + 0 MSMEG_6070 rpmE ribosomal protein L31 identified by match to protein family HMM PF01197 A0R554 No unknown NC_008596.1 Mycobrowser_v3 CDS 4048092 4048870 . - 0 MSMEG_3979 MSMEG_3979 alpha/beta hydrolase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6116358 6117524 . - 0 MSMEG_6049 MSMEG_6049 secreted protein A0R535 No unknown NC_008596.1 Mycobrowser_v3 CDS 6117544 6118446 . - 0 MSMEG_6050 MSMEG_6050 solute-binding lipoprotein identified by match to protein family HMM PF01297 A0R536 No unknown NC_008596.1 Mycobrowser_v3 CDS 6120497 6121207 . + 0 MSMEG_6052 MSMEG_6052 ABC transport protein, ATP-binding subunit identified by match to protein family HMM PF00005 A0R537 No unknown NC_008596.1 Mycobrowser_v3 CDS 6121823 6122608 . + 0 MSMEG_6054 MSMEG_6054 LamB/YcsF identified by match to protein family HMM PF03746 A0R539 No unknown NC_008596.1 Mycobrowser_v3 CDS 6125473 6127611 . - 0 MSMEG_6058 MSMEG_6058 cadmium transporting P-type ATPase identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525 A0R542 No unknown Rv3270 Rv3270 NC_008596.1 Mycobrowser_v3 CDS 6127999 6129036 . + 0 MSMEG_6060 MSMEG_6060 permease identified by match to protein family HMM PF03773 A0R544 No unknown NC_008596.1 Mycobrowser_v3 CDS 6129033 6129749 . + 0 MSMEG_6061 MSMEG_6061 conserved hypothetical protein A0R545 No unknown NC_008596.1 Mycobrowser_v3 CDS 6129763 6130554 . - 0 MSMEG_6062 MSMEG_6062 Fe uptake system permease identified by match to protein family HMM PF00005 A0R546 No unknown NC_008596.1 Mycobrowser_v3 CDS 6130551 6131585 . - 0 MSMEG_6063 MSMEG_6063 Fe uptake system integral membrane protein identified by match to protein family HMM PF01032; match to protein family HMM PF02653 A0R547 No unknown NC_008596.1 Mycobrowser_v3 CDS 6131586 6132566 . - 0 MSMEG_6064 MSMEG_6064 lipoprotein identified by match to protein family HMM PF01497 A0R548 No unknown NC_008596.1 Mycobrowser_v3 CDS 6132746 6133003 . - 0 MSMEG_6065 rpsR ribosomal protein S18 identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165 A0R549 No unknown Rv2055c Rv2055c NC_008596.1 Mycobrowser_v3 CDS 6133794 6134993 . + 0 MSMEG_6069 MSMEG_6069 CobW/P47K C- domain protein identified by match to protein family HMM PF07683 A0R553 No unknown Rv0106 Rv0106 NC_008596.1 Mycobrowser_v3 CDS 6135261 6136205 . + 0 MSMEG_6071 MSMEG_6071 metallo-beta-lactamase superfamily protein identified by match to protein family HMM PF00753 A0R555 No unknown Rv3577 Rv3577 NC_008596.1 Mycobrowser_v3 CDS 6136154 6137437 . + 0 MSMEG_6072 MSMEG_6072 Citrate transporter identified by match to protein family HMM PF02040; match to protein family HMM PF03600 A0R556 No unknown Rv3578 Rv3578 NC_008596.1 Mycobrowser_v3 CDS 6133000 6133305 . - 0 MSMEG_6066 rpsN 30S ribosomal protein S14 identified by match to protein family HMM PF00253 A0R550 No unknown Rv2056c Rv2056c NC_008596.1 Mycobrowser_v3 CDS 6137444 6138388 . - 0 MSMEG_6073 MSMEG_6073 RNA methyltransferase, TrmH family protein, group 3 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186 A0R557 No unknown Rv3579c Rv3579c NC_008596.1 Mycobrowser_v3 CDS 6138388 6139821 . - 0 MSMEG_6074 cysS cysteinyl-tRNA synthetase identified by match to protein family HMM PF01406; match to protein family HMM TIGR00435 A0R558 No unknown Rv3580c Rv3580c NC_008596.1 Mycobrowser_v3 CDS 6543238 6543909 . + 0 MSMEG_6482 MSMEG_6482 secreted protein A0R6A6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6139851 6140342 . - 0 MSMEG_6075 ispF 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase identified by match to protein family HMM PF02542; match to protein family HMM TIGR00151 A0R559 No unknown Rv3581c Rv3581c NC_008596.1 Mycobrowser_v3 CDS 6140339 6141007 . - 0 MSMEG_6076 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase identified by match to protein family HMM PF01128; match to protein family HMM TIGR00453 A0R560 No unknown Rv3582c Rv3582c NC_008596.1 Mycobrowser_v3 CDS 6141027 6141515 . - 0 MSMEG_6077 MSMEG_6077 transcriptional regulator, CarD family protein identified by match to protein family HMM PF02559 A0R561 No unknown Rv3583c Rv3583c NC_008596.1 Mycobrowser_v3 CDS 6142417 6143817 . + 0 MSMEG_6079 radA DNA repair protein RadA identified by match to protein family HMM TIGR00416 A0R563 No unknown Rv3585 Rv3585 NC_008596.1 Mycobrowser_v3 CDS 6143853 6144971 . + 0 MSMEG_6080 MSMEG_6080 conserved hypothetical protein identified by match to protein family HMM PF02457 A0R564 No unknown Rv3586 Rv3586 NC_008596.1 Mycobrowser_v3 CDS 6144973 6145758 . - 0 MSMEG_6081 MSMEG_6081 conserved hypothetical protein A0R565 No unknown Rv3587c Rv3587c NC_008596.1 Mycobrowser_v3 CDS 6145828 6146448 . - 0 MSMEG_6082 MSMEG_6082 carbonic anhydrase identified by match to protein family HMM PF00484 A0R566 No unknown Rv3588c Rv3588c NC_008596.1 Mycobrowser_v3 CDS 6146474 6147355 . + 0 MSMEG_6083 MSMEG_6083 base excision DNA repair protein, HhH-GPD family protein identified by match to protein family HMM PF00633; match to protein family HMM PF00730 A0R567 No unknown Rv3589 Rv3589 NC_008596.1 Mycobrowser_v3 CDS 6396103 6396618 . - 0 MSMEG_6329 MSMEG_6329 conserved hypothetical protein identified by match to protein family HMM PF06475 A0R5V9 No unknown Rv3755c Rv3755c NC_008596.1 Mycobrowser_v3 CDS 6148672 6149445 . - 0 MSMEG_6085 MSMEG_6085 hydrolase, alpha/beta hydrolase fold family protein identified by match to protein family HMM PF00561 A0R568 No unknown Rv3591c Rv3591c NC_008596.1 Mycobrowser_v3 CDS 6149485 6149802 . + 0 MSMEG_6086 MSMEG_6086 antibiotic biosynthesis monooxygenase domain protein identified by match to protein family HMM PF03992 A0R569 No unknown Rv3592 Rv3592 NC_008596.1 Mycobrowser_v3 CDS 6149846 6151165 . + 0 MSMEG_6087 MSMEG_6087 beta-lactamase identified by match to protein family HMM PF00144 A0R570 No unknown Rv3593 Rv3593 NC_008596.1 Mycobrowser_v3 CDS 6151170 6151718 . - 0 MSMEG_6088 MSMEG_6088 phosphoglycerate mutase identified by match to protein family HMM PF00300 A0R571 No unknown NC_008596.1 Mycobrowser_v3 CDS 6151715 6152521 . - 0 MSMEG_6089 MSMEG_6089 conserved hypothetical protein A0R572 No unknown NC_008596.1 Mycobrowser_v3 CDS 6152546 6152758 . - 0 MSMEG_6090 MSMEG_6090 conserved hypothetical protein A0R573 No unknown NC_008596.1 Mycobrowser_v3 CDS 6165816 6166427 . - 0 MSMEG_6104 folE GTP cyclohydrolase I identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063 A0R587 No unknown Rv3609c Rv3609c NC_008596.1 Mycobrowser_v3 CDS 6152971 6155517 . - 0 MSMEG_6091 MSMEG_6091 negative regulator of genetic competence ClpC/mecB identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 A0R574 No unknown Rv3596c Rv3596c NC_008596.1 Mycobrowser_v3 CDS 6155687 6156166 . + 0 MSMEG_6093 MSMEG_6093 hypothetical protein identified by Glimmer2; putative A0R575 No unknown NC_008596.1 Mycobrowser_v3 CDS 6155786 6156130 . - 0 MSMEG_6092 MSMEG_6092 Lsr2 protein A0R576 No unknown Rv3597c Rv3597c NC_008596.1 Mycobrowser_v3 CDS 6156246 6157769 . - 0 MSMEG_6094 lysS lysyl-tRNA synthetase identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 A0R577 No unknown Rv3598c Rv3598c NC_008596.1 Mycobrowser_v3 CDS 6157793 6159031 . + 0 MSMEG_6095 MSMEG_6095 D-amino acid deaminase A0R578 No unknown NC_008596.1 Mycobrowser_v3 CDS 6159032 6159847 . - 0 MSMEG_6096 MSMEG_6096 Bvg accessory factor family protein identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671 A0R579 No unknown Rv3600c Rv3600c NC_008596.1 Mycobrowser_v3 CDS 6159923 6160867 . - 0 MSMEG_6097 panC pantoate--beta-alanine ligase identified by match to protein family HMM PF02569; match to protein family HMM TIGR00018 A0R580 No unknown Rv3602c Rv3602c NC_008596.1 Mycobrowser_v3 CDS 6219676 6220032 . + 0 MSMEG_6150 MSMEG_6150 4-carboxymuconolactone decarboxylase identified by match to protein family HMM PF02627 A0R5D3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6160864 6161811 . - 0 MSMEG_6098 MSMEG_6098 chalcone/stilbene synthase family protein A0R581 No unknown Rv3603c Rv3603c NC_008596.1 Mycobrowser_v3 CDS 6161892 6163442 . - 0 MSMEG_6099 MSMEG_6099 probable conserved transmembrane protein rich in alanine A0R582 No unknown Rv3604c Rv3604c NC_008596.1 Mycobrowser_v3 CDS 6163589 6164065 . - 0 MSMEG_6100 MSMEG_6100 conserved hypothetical protein A0R583 No unknown Rv3605c Rv3605c NC_008596.1 Mycobrowser_v3 CDS 6164065 6164601 . - 0 MSMEG_6101 folK 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498 A0R584 No unknown Rv3606c Rv3606c NC_008596.1 Mycobrowser_v3 CDS 6164598 6164969 . - 0 MSMEG_6102 folB dihydroneopterin aldolase identified by match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526 A0R585 No unknown Rv3607c Rv3607c NC_008596.1 Mycobrowser_v3 CDS 6164962 6165819 . - 0 MSMEG_6103 folP dihydropteroate synthase identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496 A0R586 No unknown Rv3608c Rv3608c NC_008596.1 Mycobrowser_v3 CDS 6166447 6168759 . - 0 MSMEG_6105 MSMEG_6105 cell division protein identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241 A0R588 No unknown Rv3610c Rv3610c NC_008596.1 Mycobrowser_v3 CDS 6168956 6169927 . + 0 MSMEG_6106 MSMEG_6106 epoxide hydrolase identified by match to protein family HMM PF00561 A0R589 No unknown Rv3617 Rv3617 NC_008596.1 Mycobrowser_v3 CDS 6169927 6171114 . + 0 MSMEG_6107 MSMEG_6107 limonene 1,2-monooxygenase identified by match to protein family HMM PF00296 A0R590 No unknown Rv3618 Rv3618 NC_008596.1 Mycobrowser_v3 CDS 6171114 6172130 . + 0 MSMEG_6108 MSMEG_6108 zinc-binding dehydrogenase identified by match to protein family HMM PF00107 A0R591 No unknown NC_008596.1 Mycobrowser_v3 CDS 6172152 6172883 . + 0 MSMEG_6109 MSMEG_6109 LpqG protein identified by match to protein family HMM PF04402 A0R592 No unknown Rv3623 Rv3623 NC_008596.1 Mycobrowser_v3 CDS 6172888 6173469 . - 0 MSMEG_6110 hpt hypoxanthine phosphoribosyltransferase identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203 A0R593 No unknown Rv3624c Rv3624c NC_008596.1 Mycobrowser_v3 CDS 6173520 6174488 . - 0 MSMEG_6111 tilS tRNA(Ile)-lysidine synthetase identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432 A0R594 No unknown Rv3625c Rv3625c NC_008596.1 Mycobrowser_v3 CDS 1303496 1304382 . + 0 MSMEG_1233 MSMEG_1233 ABC transporter permease; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6174467 6175540 . - 0 MSMEG_6112 MSMEG_6112 conserved hypothetical protein A0R595 No unknown Rv3626c Rv3626c NC_008596.1 Mycobrowser_v3 CDS 6175537 6176979 . - 0 MSMEG_6113 dacB D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666 A0R596 No unknown Rv3627c Rv3627c NC_008596.1 Mycobrowser_v3 CDS 6177063 6177551 . + 0 MSMEG_6114 ppa inorganic pyrophosphatase identified by match to protein family HMM PF00719 A0R597 No unknown Rv3628 Rv3628 NC_008596.1 Mycobrowser_v3 CDS 6177612 6178142 . + 0 MSMEG_6116 MSMEG_6116 conserved hypothetical protein A0R598 No unknown NC_008596.1 Mycobrowser_v3 CDS 6178118 6179122 . - 0 MSMEG_6115 MSMEG_6115 phosphoglycerate dehydrogenase identified by match to protein family HMM PF02826 A0R599 No unknown NC_008596.1 Mycobrowser_v3 CDS 6179128 6180477 . - 0 MSMEG_6117 MSMEG_6117 glucarate dehydratase identified by match to protein family HMM PF01188 A0R5A0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6180503 6181303 . - 0 MSMEG_6118 MSMEG_6118 IclR-family protein transcriptional regulator identified by match to protein family HMM PF01614 A0R5A1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6181305 6182027 . - 0 MSMEG_6119 MSMEG_6119 conserved hypothetical protein identified by match to protein family HMM PF01925 A0R5A2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6182024 6183022 . - 0 MSMEG_6120 MSMEG_6120 peptide transport system ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727 A0R5A3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6274084 6274581 . + 0 MSMEG_6207 MSMEG_6207 conserved hypothetical protein A0R5I8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6183015 6184046 . - 0 MSMEG_6121 MSMEG_6121 dipeptide transport ATP-binding protein DppD identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727 A0R5A4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6184043 6185029 . - 0 MSMEG_6122 MSMEG_6122 ABC transporter, membrane spanning protein identified by match to protein family HMM PF00528 A0R5A5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6185038 6185967 . - 0 MSMEG_6123 MSMEG_6123 ABC transporter, membrane spanning protein identified by match to protein family HMM PF00528 A0R5A6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6185995 6187557 . - 0 MSMEG_6124 MSMEG_6124 putative ABC transporter periplasmic oligopeptide-binding protein identified by match to protein family HMM PF00496 A0R5A7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6220029 6220904 . + 0 MSMEG_6151 MSMEG_6151 alpha/beta hydrolase fold-1 identified by match to protein family HMM PF00561 A0R5D4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6187851 6188864 . + 0 MSMEG_6126 MSMEG_6126 D-isomer specific 2-hydroxyacid dehydrogenase identified by match to protein family HMM PF00389; match to protein family HMM PF02826 A0R5A8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6188858 6189787 . - 0 MSMEG_6125 MSMEG_6125 transcriptional regulatory protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R5A9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6190044 6190403 . + 0 MSMEG_6127 MSMEG_6127 anti-anti-sigma factor identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377 A0R5B0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6190437 6190883 . + 0 MSMEG_6129 MSMEG_6129 conserved hypothetical protein A0R5B1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6190869 6191315 . - 0 MSMEG_6128 MSMEG_6128 two-component system response regulator identified by match to protein family HMM PF00072 A0R5B2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6237917 6238549 . - 0 MSMEG_6168 MSMEG_6168 bacterial type II secretion system protein F domain identified by match to protein family HMM PF00482 A0R5F0 No unknown Rv3658c Rv3658c NC_008596.1 Mycobrowser_v3 CDS 6191312 6192889 . - 0 MSMEG_6130 MSMEG_6130 two-component sensor protein identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227 A0R5B3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6192886 6194094 . - 0 MSMEG_6131 MSMEG_6131 magnesium or manganese-dependent protein phosphatase identified by match to protein family HMM PF00072; match to protein family HMM PF07228 A0R5B4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6194325 6195596 . - 0 MSMEG_6132 MSMEG_6132 glucarate dehydratase identified by match to protein family HMM PF01188 A0R5B5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6229274 6229867 . - 0 MSMEG_6158 MSMEG_6158 conserved hypothetical protein A0R5E0 No unknown Rv3647c Rv3647c NC_008596.1 Mycobrowser_v3 CDS 6195607 6196530 . - 0 MSMEG_6133 MSMEG_6133 5-dehydro-4-deoxyglucarate dehydratase identified by match to protein family HMM PF00701 A0R5B6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6196561 6198159 . - 0 MSMEG_6134 MSMEG_6134 NADP-dependent fatty aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0R5B7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6198302 6198706 . - 0 MSMEG_6135 MSMEG_6135 hypothetical protein identified by Glimmer2; putative A0R5B8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6198808 6199776 . - 0 MSMEG_6136 MSMEG_6136 membrane protein, TerC family protein identified by match to protein family HMM PF03741 A0R5B9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6217061 6218383 . + 0 MSMEG_6148 MSMEG_6148 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6218391 6219092 . - 0 MSMEG_6149 MSMEG_6149 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6221127 6222335 . - 0 MSMEG_6153 MSMEG_6153 DNA polymerase III subunit delta identified by match to protein family HMM TIGR00678 A0R5D5 No unknown Rv3644c Rv3644c NC_008596.1 Mycobrowser_v3 CDS 6214302 6215708 . + 0 MSMEG_6146 MSMEG_6146 ISMsm3, transposase identified by similarity to GP:4838457; match to protein family HMM PF01609 A0QP14 No unknown NC_008596.1 Mycobrowser_v3 CDS 6215883 6216974 . + 0 MSMEG_6147 MSMEG_6147 conserved hypothetical protein A0R5D0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6200005 6203940 . + 0 MSMEG_6137 MSMEG_6137 non-ribosomal peptide synthetase identified by match to protein family HMM PF00132; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733; match to protein family HMM TIGR02353 A0R5C0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6203937 6205274 . + 0 MSMEG_6138 MSMEG_6138 metallopeptidase identified by match to protein family HMM PF01433 A0R5C1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6205271 6206551 . + 0 MSMEG_6140 MSMEG_6140 membrane protein A0R5C2 No unknown Rv1510,Rv3630 Rv1510,Rv3630 NC_008596.1 Mycobrowser_v3 CDS 6206541 6207134 . - 0 MSMEG_6139 MSMEG_6139 putative HTH-type transcriptional regulator identified by match to protein family HMM PF00440 A0R5C3 No unknown Rv2912c Rv2912c NC_008596.1 Mycobrowser_v3 CDS 6229963 6230166 . - 0 MSMEG_6159 MSMEG_6159 conserved domain protein identified by match to protein family HMM PF00313 A0R5E1 No unknown Rv3648c Rv3648c NC_008596.1 Mycobrowser_v3 CDS 6258374 6258850 . - 0 MSMEG_6191 MSMEG_6191 translation initiation inhibitor identified by match to protein family HMM PF01042 A0R5H3 No unknown Rv3678c Rv3678c NC_008596.1 Mycobrowser_v3 CDS 6207136 6208917 . - 0 MSMEG_6141 MSMEG_6141 N-acyl-D-glutamate amidohydrolase A0R5C4 No unknown Rv2913c Rv2913c NC_008596.1 Mycobrowser_v3 CDS 6208979 6209926 . - 0 MSMEG_6142 MSMEG_6142 nucleoside-diphosphate-sugar epimerase identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 A0R5C5 No unknown Rv3634c Rv3634c NC_008596.1 Mycobrowser_v3 CDS 6209977 6211740 . + 0 MSMEG_6143 MSMEG_6143 conserved hypothetical protein A0R5C6 No unknown Rv3635 Rv3635 NC_008596.1 Mycobrowser_v3 CDS 6211742 6213193 . - 0 MSMEG_6144 MSMEG_6144 pe family protein A0R5C7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6213505 6214221 . + 0 MSMEG_6145 MSMEG_6145 hypothetical protein identified by Glimmer2; putative A0R5C8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6237351 6237920 . - 0 MSMEG_6167 MSMEG_6167 bacterial type II secretion system protein F domain identified by match to protein family HMM PF00482 A0R5E9 No unknown Rv3657c Rv3657c NC_008596.1 Mycobrowser_v3 CDS 6222417 6224108 . + 0 MSMEG_6154 MSMEG_6154 adenylate cyclase, family protein 3 identified by match to protein family HMM PF00211; match to protein family HMM PF00672 A0R5D6 No unknown Rv3645 Rv3645 NC_008596.1 Mycobrowser_v3 tRNA 6220991 6221063 . - 0 MSMEG_6152 MSMEG_6152 tRNA-Thr No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 6224166 6225488 . + 0 MSMEG_6155 MSMEG_6155 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6225496 6226197 . - 0 MSMEG_6156 MSMEG_6156 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6226360 6229170 . - 0 MSMEG_6157 topA DNA topoisomerase I identified by match to protein family HMM PF01131; match to protein family HMM PF01751; match to protein family HMM TIGR01051 A0R5D9 No unknown Rv3646c Rv3646c NC_008596.1 Mycobrowser_v3 CDS 6258847 6259008 . - 0 MSMEG_6192 MSMEG_6192 conserved hypothetical protein A0R5H4 No unknown Rv3678A Rv3678A NC_008596.1 Mycobrowser_v3 CDS 6230468 6232798 . + 0 MSMEG_6160 MSMEG_6160 ATP-dependent rna helicase, dead/deah box family protein identified by match to protein family HMM PF00270; match to protein family HMM PF00271 A0R5E2 No unknown Rv3649 Rv3649 NC_008596.1 Mycobrowser_v3 CDS 6233070 6234392 . + 0 MSMEG_6161 MSMEG_6161 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6234400 6235101 . - 0 MSMEG_6162 MSMEG_6162 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6235347 6236363 . + 0 MSMEG_6163 MSMEG_6163 conserved hypothetical protein A0R5E5 No unknown Rv3651 Rv3651 NC_008596.1 Mycobrowser_v3 CDS 6236388 6236831 . + 0 MSMEG_6166 MSMEG_6166 hypothetical protein identified by Glimmer2; putative A0R5E6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6236448 6236774 . - 0 MSMEG_6164 MSMEG_6164 conserved hypothetical protein A0R5E7 No unknown Rv3654c Rv3654c NC_008596.1 Mycobrowser_v3 CDS 6236785 6237345 . - 0 MSMEG_6165 MSMEG_6165 conserved hypothetical protein A0R5E8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6251348 6251857 . - 0 MSMEG_6181 MSMEG_6181 conserved hypothetical protein A0R5G3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6238524 6238718 . + 0 MSMEG_6170 MSMEG_6170 hypothetical protein identified by Glimmer2; putative A0R5F1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6238696 6239853 . - 0 MSMEG_6169 MSMEG_6169 type II/IV secretion system protein identified by match to protein family HMM PF00437 A0R5F2 No unknown Rv3659c Rv3659c NC_008596.1 Mycobrowser_v3 CDS 6239850 6240800 . - 0 MSMEG_6171 MSMEG_6171 conserved hypothetical protein A0R5F3 No unknown Rv3660c Rv3660c NC_008596.1 Mycobrowser_v3 CDS 6240784 6241332 . - 0 MSMEG_6172 MSMEG_6172 hypothetical protein identified by Glimmer2; putative A0R5F4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6241372 6242253 . + 0 MSMEG_6173 MSMEG_6173 morphological differentiation-associated protein identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490 A0R5F5 No unknown Rv3661 Rv3661 NC_008596.1 Mycobrowser_v3 CDS 6242692 6243474 . - 0 MSMEG_6174 MSMEG_6174 transcriptional regulator, IclR family protein identified by match to protein family HMM PF01614 A0R5F6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6243569 6244549 . + 0 MSMEG_6175 MSMEG_6175 2-keto-3-deoxy-galactonokinase identified by match to protein family HMM PF05035 A0R5F7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6244546 6245172 . + 0 MSMEG_6176 MSMEG_6176 2-dehydro-3-deoxy-6-phosphogalactonate aldolase identified by match to protein family HMM PF01081 A0R5F8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6245169 6246317 . + 0 MSMEG_6177 MSMEG_6177 galactonate dehydratase identified by match to protein family HMM PF01188; match to protein family HMM PF02746 A0R5F9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6246323 6247654 . + 0 MSMEG_6178 MSMEG_6178 D-galactonate transporter identified by match to protein family HMM PF07690 A0R5G0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6247672 6250494 . + 0 MSMEG_6179 MSMEG_6179 acetyl-coenzyme A synthetase identified by match to protein family HMM PF00501; match to protein family HMM TIGR02188 A0R5G1 No unknown Rv3667 Rv3667 NC_008596.1 Mycobrowser_v3 CDS 1356367 1357844 . - 0 MSMEG_1267 MSMEG_1267 ribosylglycohydrolase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00782 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6250558 6251238 . - 0 MSMEG_6180 MSMEG_6180 secreted protein A0R5G2 No unknown Rv3668c Rv3668c NC_008596.1 Mycobrowser_v3 CDS 6251920 6252870 . + 0 MSMEG_6184 MSMEG_6184 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0R5G5 No unknown Rv3670 Rv3670 NC_008596.1 Mycobrowser_v3 CDS 6266743 6267099 . - 0 MSMEG_6199 MSMEG_6199 Transcription factor WhiB identified by match to protein family HMM PF02467 A0R5I1 No unknown Rv3681c Rv3681c NC_008596.1 Mycobrowser_v3 CDS 6252860 6254050 . - 0 MSMEG_6183 MSMEG_6183 serine protease identified by match to protein family HMM PF00089; match to protein family HMM PF02674 A0R5G6 No unknown Rv3671c Rv3671c NC_008596.1 Mycobrowser_v3 CDS 6254050 6254838 . - 0 MSMEG_6185 MSMEG_6185 NTP pyrophosphohydrolase identified by match to protein family HMM PF00293 A0R5G7 No unknown Rv3672c Rv3672c NC_008596.1 Mycobrowser_v3 CDS 6254850 6255497 . - 0 MSMEG_6186 MSMEG_6186 conserved hypothetical protein A0R5G8 No unknown Rv3673c Rv3673c NC_008596.1 Mycobrowser_v3 CDS 6255512 6256291 . - 0 MSMEG_6187 nth endonuclease III identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083 A0R5G9 No unknown Rv3674c Rv3674c NC_008596.1 Mycobrowser_v3 CDS 6256441 6256734 . + 0 MSMEG_6188 MSMEG_6188 conserved hypothetical protein A0R5H0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6256824 6257498 . + 0 MSMEG_6189 MSMEG_6189 transcriptional regulator, Crp/Fnr family protein identified by match to protein family HMM PF00027; match to protein family HMM PF00325 A0R5H1 No unknown Rv3676 Rv3676 NC_008596.1 Mycobrowser_v3 CDS 6257583 6258377 . - 0 MSMEG_6190 MSMEG_6190 metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 A0R5H2 No unknown Rv3677c Rv3677c NC_008596.1 Mycobrowser_v3 CDS 6259056 6260090 . + 0 MSMEG_6193 MSMEG_6193 anion-transporting ATPase identified by match to protein family HMM PF02374 A0R5H5 No unknown Rv3679 Rv3679 NC_008596.1 Mycobrowser_v3 CDS 6260087 6261217 . + 0 MSMEG_6195 MSMEG_6195 ion-transporting ATPase identified by match to protein family HMM PF02374 A0R5H6 No unknown Rv3680 Rv3680 NC_008596.1 Mycobrowser_v3 CDS 6261214 6262032 . - 0 MSMEG_6194 MSMEG_6194 beta-lactamase related protein A0R5H7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6262025 6263446 . - 0 MSMEG_6196 MSMEG_6196 gaba permease identified by match to protein family HMM PF00324; match to protein family HMM PF03845 A0R5H8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6263460 6264839 . - 0 MSMEG_6197 MSMEG_6197 diaminopimelate decarboxylase identified by match to protein family HMM PF00278; match to protein family HMM PF02784 A0R5H9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6279519 6280592 . + 0 MSMEG_6216 MSMEG_6216 integral membrane protein A0R5J7 No unknown Rv3689 Rv3689 NC_008596.1 Mycobrowser_v3 CDS 6264963 6266579 . - 0 MSMEG_6198 MSMEG_6198 DNA-binding protein, putative identified by match to protein family HMM PF02954 A0R5I0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6267483 6269849 . + 0 MSMEG_6201 MSMEG_6201 Transglycosylase identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793 A0R5I3 No unknown Rv3682 Rv3682 NC_008596.1 Mycobrowser_v3 CDS 6269949 6270935 . + 0 MSMEG_6202 MSMEG_6202 secreted protein identified by match to protein family HMM PF00149 A0R5I4 No unknown Rv3683 Rv3683 NC_008596.1 Mycobrowser_v3 CDS 6270944 6272041 . + 0 MSMEG_6203 MSMEG_6203 cysteine synthase/cystathionine beta-synthase family protein identified by match to protein family HMM PF00291 A0R5I5 No unknown Rv3684 Rv3684 NC_008596.1 Mycobrowser_v3 CDS 6272624 6272785 . + 0 MSMEG_6205 MSMEG_6205 hypothetical protein identified by Glimmer2; putative A0R5I6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6272798 6274021 . - 0 MSMEG_6206 MSMEG_6206 serine/threonine protein kinase PksC identified by match to protein family HMM PF00069 A0R5I7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6274619 6275416 . + 0 MSMEG_6208 MSMEG_6208 palmitoyl-CoA hydrolase identified by match to protein family HMM PF02551 A0R5I9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6275481 6275699 . + 0 MSMEG_6209 MSMEG_6209 conserved hypothetical protein A0R5J0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6275706 6276398 . + 0 MSMEG_6210 MSMEG_6210 conserved hypothetical protein A0R5J1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6276404 6276556 . - 0 MSMEG_6211 MSMEG_6211 hypothetical protein identified by Glimmer2; putative A0R5J2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6276681 6277265 . + 0 MSMEG_6212 MSMEG_6212 hemerythrin HHE cation binding domain subfamily protein, putative A0R5J3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6277327 6278220 . - 0 MSMEG_6213 MSMEG_6213 Manganese containing catalase identified by match to protein family HMM PF05067 A0R5J4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6278296 6278760 . - 0 MSMEG_6214 MSMEG_6214 GatB/Yqey domain protein identified by match to protein family HMM PF02637 A0R5J5 No unknown Rv3688c Rv3688c NC_008596.1 Mycobrowser_v3 CDS 6278771 6279496 . - 0 MSMEG_6215 MSMEG_6215 conserved hypothetical protein identified by match to protein family HMM PF04402 A0R5J6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6281226 6282347 . + 0 MSMEG_6218 MSMEG_6218 secreted protein A0R5J9 No unknown Rv3691 Rv3691 NC_008596.1 Mycobrowser_v3 CDS 6282344 6283315 . + 0 MSMEG_6219 MSMEG_6219 ATPase family protein associated with various cellular activities (AAA) identified by match to protein family HMM PF07726; match to protein family HMM PF07728 A0R5K0 No unknown Rv3692 Rv3692 NC_008596.1 Mycobrowser_v3 CDS 6283315 6284637 . + 0 MSMEG_6220 MSMEG_6220 lipoprotein identified by match to protein family HMM PF01882 A0R5K1 No unknown Rv3693 Rv3693 NC_008596.1 Mycobrowser_v3 CDS 6284642 6285634 . - 0 MSMEG_6221 MSMEG_6221 integral membrane protein A0R5K2 No unknown Rv3694c Rv3694c NC_008596.1 Mycobrowser_v3 CDS 6285668 6286591 . + 0 MSMEG_6222 MSMEG_6222 integral membrane protein identified by match to protein family HMM PF06271 A0R5K3 No unknown Rv3695 Rv3695 NC_008596.1 Mycobrowser_v3 CDS 6286641 6287210 . + 0 MSMEG_6223 MSMEG_6223 TetR family protein transcriptional repressor LfrR identified by match to protein family HMM PF00440 A0R5K4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6287282 6288796 . + 0 MSMEG_6225 MSMEG_6225 proton antiporter efflux pump identified by match to protein family HMM PF07690 A0R5K5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6288786 6290105 . - 0 MSMEG_6224 MSMEG_6224 Retinal pigment epithelial membrane protein identified by match to protein family HMM PF03055 A0R5K6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6290191 6290715 . + 0 MSMEG_6226 MSMEG_6226 transcriptional regulator, PadR family protein domain protein identified by match to protein family HMM PF03551 A0R5K7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6290798 6291538 . + 0 MSMEG_6227 MSMEG_6227 transcriptional regulator, PadR family protein identified by match to protein family HMM PF03551 A0R5K8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6291559 6292239 . + 0 MSMEG_6228 MSMEG_6228 hypothetical protein identified by Glimmer2; putative A0R5K9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6292243 6293760 . - 0 MSMEG_6229 glpK glycerol kinase identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311 A0R5L0 No unknown Rv3696c Rv3696c NC_008596.1 Mycobrowser_v3 CDS 6293807 6294562 . + 0 MSMEG_6231 MSMEG_6231 conserved hypothetical protein A0R5L1 No unknown Rv1978 Rv1978 NC_008596.1 Mycobrowser_v3 CDS 6294559 6295710 . - 0 MSMEG_6230 MSMEG_6230 probable acyltransferase identified by match to protein family HMM PF01757 A0R5L2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6295741 6297402 . - 0 MSMEG_6232 katA catalase KatA identified by similarity to SP:P26901; match to protein family HMM PF00199 A0R5L3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6424775 6425236 . - 0 MSMEG_6370 pcaC 4-carboxymuconolactone decarboxylase identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778 A0R5Z5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6297491 6298297 . - 0 MSMEG_6233 MSMEG_6233 conserved hypothetical protein A0R5L4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6298376 6299845 . + 0 MSMEG_6234 MSMEG_6234 CBS domain pair protein A0R5L5 No unknown Rv3698 Rv3698 NC_008596.1 Mycobrowser_v3 CDS 6299856 6300536 . + 0 MSMEG_6235 MSMEG_6235 thiopurine S-methyltransferase (tpmt) superfamily protein identified by match to protein family HMM PF05724 A0R5L6 No unknown Rv3699 Rv3699 NC_008596.1 Mycobrowser_v3 CDS 6300742 6301623 . + 0 MSMEG_6237 MSMEG_6237 conserved hypothetical protein A0R5L7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6301620 6302270 . - 0 MSMEG_6236 MSMEG_6236 two-component system, regulatory protein identified by match to protein family HMM PF00072; match to protein family HMM PF00196 A0R5L8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6302267 6303418 . - 0 MSMEG_6238 MSMEG_6238 putative two-component system sensor kinase identified by match to protein family HMM PF02518; match to protein family HMM PF07730 A0R5L9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6303617 6304816 . - 0 MSMEG_6239 MSMEG_6239 1,3-propanediol dehydrogenase identified by match to protein family HMM PF00465 A0R5M0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5221594 5222725 . - 0 MSMEG_5123 MSMEG_5123 acyl-CoA dehydrogenase, C- domain protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF08028 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6304953 6306446 . - 0 MSMEG_6240 MSMEG_6240 conserved hypothetical protein identified by match to protein family HMM PF05762 A0R5M1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6306443 6307501 . - 0 MSMEG_6241 MSMEG_6241 ATPase associated with various cellular activities, AAA-5 identified by match to protein family HMM PF07728 A0R5M2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1447333 1448336 . - 0 MSMEG_1354 MSMEG_1354 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6307532 6308803 . - 0 MSMEG_6242 MSMEG_6242 alcohol dehydrogenase, iron-containing identified by match to protein family HMM PF00465 A0R5M3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6308975 6309448 . - 0 MSMEG_6243 MSMEG_6243 response regulator receiver domain protein identified by match to protein family HMM PF07080 A0R5M4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6309530 6310090 . + 0 MSMEG_6244 MSMEG_6244 TetR-family protein transcriptional regulator identified by match to protein family HMM PF00440 A0R5M5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6409714 6410292 . + 0 MSMEG_6348 MSMEG_6348 hypothetical protein identified by Glimmer2; putative A0R5X7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6310092 6311297 . - 0 MSMEG_6245 MSMEG_6245 chloramphenicol resistance protein identified by match to protein family HMM PF06779; match to protein family HMM PF07690 A0R5M6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6311487 6312602 . - 0 MSMEG_6246 MSMEG_6246 pyridoxal-phosphate-dependent transferase identified by match to protein family HMM PF00266 A0R5M7 No unknown Rv3700c Rv3700c NC_008596.1 Mycobrowser_v3 CDS 6312599 6313564 . - 0 MSMEG_6247 MSMEG_6247 conserved hypothetical protein A0R5M8 No unknown Rv3701c Rv3701c NC_008596.1 Mycobrowser_v3 CDS 6313576 6314259 . - 0 MSMEG_6248 MSMEG_6248 conserved hypothetical protein A0R5M9 No unknown Rv3702c Rv3702c NC_008596.1 Mycobrowser_v3 CDS 6314259 6315545 . - 0 MSMEG_6249 MSMEG_6249 conserved hypothetical protein identified by match to protein family HMM PF03781 A0R5N0 No unknown Rv3703c Rv3703c NC_008596.1 Mycobrowser_v3 CDS 6315542 6316813 . - 0 MSMEG_6250 MSMEG_6250 glutamate--cysteine ligase identified by match to protein family HMM PF04107 A0R5N1 No unknown Rv3704c Rv3704c NC_008596.1 Mycobrowser_v3 CDS 6316930 6317583 . - 0 MSMEG_6251 MSMEG_6251 conserved hypothetical protein A0R5N2 No unknown Rv3705c Rv3705c NC_008596.1 Mycobrowser_v3 CDS 6317589 6318017 . - 0 MSMEG_6252 MSMEG_6252 conserved hypothetical protein A0R5N3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6318227 6318691 . - 0 MSMEG_6253 MSMEG_6253 fur family protein transcriptional regulator identified by match to protein family HMM PF01475 A0R5N4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6318744 6319214 . - 0 MSMEG_6254 MSMEG_6254 hypothetical protein identified by Glimmer2; putative A0R5N5 No unknown Rv3705A Rv3705A NC_008596.1 Mycobrowser_v3 CDS 6319355 6320461 . - 0 MSMEG_6255 MSMEG_6255 conserved hypothetical protein A0R5N6 No unknown Rv3707c Rv3707c NC_008596.1 Mycobrowser_v3 CDS 6320473 6321513 . - 0 MSMEG_6256 asd aspartate-semialdehyde dehydrogenase identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296 A0R5N7 No unknown Rv3708c Rv3708c NC_008596.1 Mycobrowser_v3 CDS 1499217 1501323 . + 0 MSMEG_1400 MSMEG_1400 elongation factor G; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00009; match to protein family HMM TIGR00231 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6321515 6322780 . - 0 MSMEG_6257 MSMEG_6257 asparate kinase, monofunctional class identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00656; match to protein family HMM TIGR00657 A0R5N8 No unknown Rv3709c Rv3709c NC_008596.1 Mycobrowser_v3 CDS 6322878 6323498 . + 0 MSMEG_6258 MSMEG_6258 nitroreductase family protein identified by match to protein family HMM PF00881 A0R5N9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6323614 6324864 . + 0 MSMEG_6259 amt ammonium transporter identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 A0R5P0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6324998 6326302 . + 0 MSMEG_6260 glnT glutamine synthetase, type III identified by match to protein family HMM PF00120; match to protein family HMM TIGR03105 A0R5P1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6326334 6327203 . + 0 MSMEG_6261 MSMEG_6261 glutamine amidotransferase, class II identified by match to protein family HMM PF00310 A0R5P2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6327191 6327886 . + 0 MSMEG_6262 MSMEG_6262 FwdC/FmdC family protein identified by match to protein family HMM PF01493 A0R5P3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6327886 6329226 . + 0 MSMEG_6263 MSMEG_6263 glutamate synthase family protein identified by match to protein family HMM PF01070; match to protein family HMM PF01180; match to protein family HMM PF01645 A0R5P4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6329223 6330410 . + 0 MSMEG_6264 MSMEG_6264 putative oxidoreductase identified by match to protein family HMM PF01266 A0R5P5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6330437 6331087 . + 0 MSMEG_6265 MSMEG_6265 transcriptional regulator identified by match to protein family HMM PF01381; match to protein family HMM PF07883 A0R5P6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6331259 6332059 . + 0 MSMEG_6266 MSMEG_6266 thiocyanate hydrolase beta subunit A0R5P7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6332056 6332766 . + 0 MSMEG_6267 MSMEG_6267 thiocyanate hydrolase gamma subunit identified by match to protein family HMM PF02979 A0R5P8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6332779 6333120 . + 0 MSMEG_6268 MSMEG_6268 putative ScnB protein A0R5P9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6333151 6334521 . + 0 MSMEG_6269 mgtE magnesium transporter identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400 A0R5Q0 No unknown Rv0362 Rv0362 NC_008596.1 Mycobrowser_v3 CDS 6394144 6394593 . - 0 MSMEG_6327 MSMEG_6327 cytidine and deoxycytidylate deaminase family protein identified by match to protein family HMM PF00383 A0R5V6 No unknown Rv3752c Rv3752c NC_008596.1 Mycobrowser_v3 CDS 6334688 6336496 . + 0 MSMEG_6271 leuA 2-isopropylmalate synthase identified by match to protein family HMM PF00682; match to protein family HMM TIGR00970 A0R5Q2 No unknown Rv3710 Rv3710 NC_008596.1 Mycobrowser_v3 CDS 6465494 6465967 . - 0 MSMEG_6395 MSMEG_6395 conserved hypothetical protein A0R620 No unknown NC_008596.1 Mycobrowser_v3 CDS 6336680 6339892 . + 0 MSMEG_6272 MSMEG_6272 NAD-glutamate dehydrogenase identified by match to protein family HMM PF05088 A0R5Q3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6340016 6340402 . + 0 MSMEG_6273 MSMEG_6273 integral membrane protein A0R5Q4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6340183 6340407 . + 0 MSMEG_6274 MSMEG_6274 conserved hypothetical protein A0R5Q5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6340409 6341422 . - 0 MSMEG_6275 MSMEG_6275 DNA polymerase III subunit epsilon identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573 A0R5Q6 No unknown Rv3711c Rv3711c NC_008596.1 Mycobrowser_v3 CDS 6341496 6342719 . + 0 MSMEG_6276 MSMEG_6276 mur ligase family protein A0R5Q7 No unknown Rv3712 Rv3712 NC_008596.1 Mycobrowser_v3 CDS 6342716 6343435 . + 0 MSMEG_6277 MSMEG_6277 cobyric acid synthase identified by match to protein family HMM PF07685 A0R5Q8 No unknown Rv3713 Rv3713 NC_008596.1 Mycobrowser_v3 CDS 6343526 6344236 . - 0 MSMEG_6278 MSMEG_6278 metallo-beta-lactamase superfamily protein, putative identified by match to protein family HMM PF00753 A0R5Q9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6344309 6344920 . - 0 MSMEG_6279 recR recombination protein RecR identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615 A0R5R0 No unknown Rv3715c Rv3715c NC_008596.1 Mycobrowser_v3 CDS 6344931 6345239 . - 0 MSMEG_6280 MSMEG_6280 conserved hypothetical protein identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103 A0R5R1 No unknown Rv3716c Rv3716c NC_008596.1 Mycobrowser_v3 CDS 6345388 6346182 . + 0 MSMEG_6281 MSMEG_6281 N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01520 A0R5R2 No unknown Rv3717 Rv3717 NC_008596.1 Mycobrowser_v3 CDS 6346190 6346627 . - 0 MSMEG_6282 MSMEG_6282 KanY protein A0R5R3 No unknown Rv3718c Rv3718c NC_008596.1 Mycobrowser_v3 CDS 6346717 6348117 . + 0 MSMEG_6283 MSMEG_6283 FAD binding domain protein identified by match to protein family HMM PF01565 A0R5R4 No unknown Rv3719 Rv3719 NC_008596.1 Mycobrowser_v3 CDS 6348114 6349427 . + 0 MSMEG_6284 MSMEG_6284 cyclopropane-fatty-acyl-phospholipid synthase identified by match to protein family HMM PF02353 A0R5R5 No unknown Rv3720 Rv3720 NC_008596.1 Mycobrowser_v3 CDS 6365564 6366517 . + 0 MSMEG_6299 MSMEG_6299 glyoxylate reductase identified by match to protein family HMM PF00389; match to protein family HMM PF02826 A0R5S9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6349463 6351460 . - 0 MSMEG_6285 MSMEG_6285 DNA polymerase III gamma/tau subunit identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397 A0R5R6 No unknown Rv3721c Rv3721c NC_008596.1 Mycobrowser_v3 CDS 6351487 6352773 . - 0 MSMEG_6286 MSMEG_6286 aspartate transaminase identified by match to protein family HMM PF00155 A0R5R7 No unknown Rv3722c Rv3722c NC_008596.1 Mycobrowser_v3 CDS 6353155 6354036 . + 0 MSMEG_6288 MSMEG_6288 conserved hypothetical protein A0R5R8 No unknown Rv3723 Rv3723 NC_008596.1 Mycobrowser_v3 CDS 6354081 6355103 . + 0 MSMEG_6289 MSMEG_6289 Trypsin identified by match to protein family HMM PF00089; match to protein family HMM PF00595 A0R5R9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6355142 6356653 . + 0 MSMEG_6290 MSMEG_6290 putative DNA-binding protein A0R5S0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6356801 6358051 . + 0 MSMEG_6291 MSMEG_6291 D-amino-acid dehydrogenase identified by match to protein family HMM PF01266 A0R5S1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6358172 6358645 . + 0 MSMEG_6292 MSMEG_6292 transcription elongation factor GreA identified by match to protein family HMM PF01272 A0R5S2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6358686 6359258 . + 0 MSMEG_6293 MSMEG_6293 transcriptional regulatory protein identified by match to protein family HMM PF00440 A0R5S3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6359407 6360657 . + 0 MSMEG_6294 MSMEG_6294 caib/baif family protein identified by match to protein family HMM PF02515 A0R5S4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6360654 6362012 . + 0 MSMEG_6295 MSMEG_6295 shikimate transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0R5S5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6362009 6363139 . + 0 MSMEG_6296 MSMEG_6296 5-exo-alcohol dehydrogenase identified by match to protein family HMM PF00107 A0R5S6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6363136 6364671 . + 0 MSMEG_6297 MSMEG_6297 aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0R5S7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6364671 6365567 . + 0 MSMEG_6298 MSMEG_6298 malyl-CoA lyase identified by match to protein family HMM PF03328 A0R5S8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6408748 6409584 . + 0 MSMEG_6347 MSMEG_6347 hypothetical protein identified by Glimmer2; putative A0R5X6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6366544 6367221 . + 0 MSMEG_6300 MSMEG_6300 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0R5T0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6367237 6368289 . - 0 MSMEG_6301 ligD DNA polymerase LigD, polymerase domain identified by match to protein family HMM TIGR02778 A0R5T1 No unknown Rv3730c Rv3730c NC_008596.1 Mycobrowser_v3 CDS 6368286 6369332 . - 0 MSMEG_6302 MSMEG_6302 DNA ligase identified by match to protein family HMM PF01068; match to protein family HMM PF04679 A0R5T2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6369392 6370456 . + 0 MSMEG_6304 MSMEG_6304 DNA ligase identified by match to protein family HMM PF01068; match to protein family HMM PF04679 A0R5T3 No unknown Rv3731 Rv3731 NC_008596.1 Mycobrowser_v3 CDS 6370453 6371685 . - 0 MSMEG_6303 MSMEG_6303 para-nitrobenzyl esterase identified by match to protein family HMM PF00135 A0R5T4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6371770 6372138 . + 0 MSMEG_6305 MSMEG_6305 conserved hypothetical protein A0R5T5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6372152 6373030 . + 0 MSMEG_6306 gltX glutamyl-tRNA synthetase identified by match to protein family HMM PF00749 A0R5T6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6400727 6401740 . - 0 MSMEG_6337 MSMEG_6337 Phosphotransferase enzyme family protein identified by match to protein family HMM PF01636 A0R5W6 No unknown Rv3761c Rv3761c NC_008596.1 Mycobrowser_v3 CDS 6373123 6374550 . + 0 MSMEG_6307 MSMEG_6307 glutamine-binding periplasmic protein/glutamine transport system permease protein identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726 A0R5T7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6374547 6375320 . + 0 MSMEG_6309 MSMEG_6309 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0R5T8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6375317 6375430 . - 0 MSMEG_6308 MSMEG_6308 hypothetical protein identified by Glimmer2; putative A0R5T9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6375427 6376752 . - 0 MSMEG_6310 MSMEG_6310 4-hydroxybutyrate coenzyme A transferase identified by match to protein family HMM PF02550 A0R5U0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6376779 6377996 . - 0 MSMEG_6311 lys1 saccharopine dehydrogenase identified by match to protein family HMM PF03435 A0R5U1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6378073 6379317 . - 0 MSMEG_6312 MSMEG_6312 cytochrome P450 107B1 identified by match to protein family HMM PF00067 A0R5U2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1507983 1509466 . + 0 MSMEG_1407 MSMEG_1407 Na(+)/H(+) antiporter; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6395196 6396140 . + 0 MSMEG_6330 MSMEG_6330 prephenate dehydrogenase identified by match to protein family HMM PF02153 A0R5V8 No unknown Rv3754 Rv3754 NC_008596.1 Mycobrowser_v3 CDS 6379351 6380595 . - 0 MSMEG_6313 tgt queuine tRNA-ribosyltransferase identified by match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449 A0R5U3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6380664 6381155 . + 0 MSMEG_6315 MSMEG_6315 lipoprotein LpqH identified by match to protein family HMM PF05481 A0R5U4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6381142 6382050 . - 0 MSMEG_6314 MSMEG_6314 haloalkane dehalogenase 1 identified by match to protein family HMM PF00561 A0R5U5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6382186 6382716 . + 0 MSMEG_6316 MSMEG_6316 lipoprotein LpqH identified by match to protein family HMM PF05481 A0R5U6 No unknown Rv3763 Rv3763 NC_008596.1 Mycobrowser_v3 CDS 6382820 6383470 . + 0 MSMEG_6317 MSMEG_6317 lipolytic enzyme, G-D-S-L identified by match to protein family HMM PF00657 A0R5U7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6383481 6385259 . + 0 MSMEG_6319 MSMEG_6319 penicillin-binding protein, transpeptidase identified by match to protein family HMM PF00905; match to protein family HMM PF05223 A0R5U8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6401750 6402358 . - 0 MSMEG_6338 MSMEG_6338 phosphoglycerate mutase family protein, putative identified by match to protein family HMM PF00300 A0R5W7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6385224 6386960 . - 0 MSMEG_6318 MSMEG_6318 putative diol dehydratase reactivation protein A0R5U9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6386957 6387301 . - 0 MSMEG_6320 MSMEG_6320 diol dehydrase gamma subunit A0R5V0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6387298 6389571 . - 0 MSMEG_6321 MSMEG_6321 glycerol dehydratase large subunit identified by match to protein family HMM PF02286 A0R5V1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6405953 6406825 . - 0 MSMEG_6342 MSMEG_6342 oxidoreductase identified by match to protein family HMM PF03446; match to protein family HMM PF03807 A0R5X1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6389612 6390985 . - 0 MSMEG_6322 MSMEG_6322 bifunctional wax ester synthase/acyl-CoA diacylglycerol acyltransferase identified by match to protein family HMM PF03007; match to protein family HMM TIGR02946 A0R5V2 No unknown Rv3734c Rv3734c NC_008596.1 Mycobrowser_v3 CDS 6391100 6391510 . + 0 MSMEG_6323 MSMEG_6323 hypothetical protein identified by Glimmer2; putative A0R5V3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6391470 6393257 . + 0 MSMEG_6324 MSMEG_6324 peroxidase identified by match to protein family HMM PF03098 A0R5V4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6393250 6393789 . + 0 MSMEG_6325 MSMEG_6325 conserved hypothetical protein identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026 A0R5V5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6394590 6395096 . - 0 MSMEG_6328 MSMEG_6328 conserved hypothetical protein A0R5V7 No unknown Rv3753c Rv3753c NC_008596.1 Mycobrowser_v3 CDS 6396702 6397508 . - 0 MSMEG_6331 MSMEG_6331 ABC transporter, permease protein ProZ identified by match to protein family HMM PF00528 A0R5W0 No unknown Rv3756c Rv3756c NC_008596.1 Mycobrowser_v3 CDS 6397505 6398149 . - 0 MSMEG_6332 MSMEG_6332 amino acid ABC transporter, permease protein identified by match to protein family HMM PF00528 A0R5W1 No unknown Rv3757c Rv3757c NC_008596.1 Mycobrowser_v3 CDS 6398149 6399255 . - 0 MSMEG_6333 MSMEG_6333 amino acid ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0R5W2 No unknown Rv3758c Rv3758c NC_008596.1 Mycobrowser_v3 CDS 6399266 6399955 . - 0 MSMEG_6334 MSMEG_6334 ABC transporter, quaternary amine uptake transporter (QAT) family protein, substrate-binding protein identified by match to protein family HMM PF04069 A0R5W3 No unknown Rv3759c Rv3759c NC_008596.1 Mycobrowser_v3 CDS 6399944 6400210 . + 0 MSMEG_6335 MSMEG_6335 hypothetical protein identified by Glimmer2; putative A0R5W4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6400335 6400700 . + 0 MSMEG_6336 MSMEG_6336 conserved hypothetical protein A0R5W5 No unknown Rv3760 Rv3760 NC_008596.1 Mycobrowser_v3 CDS 6402432 6403187 . + 0 MSMEG_6340 MSMEG_6340 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0R5W8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6403184 6405064 . - 0 MSMEG_6339 MSMEG_6339 metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 A0R5W9 No unknown Rv3762c Rv3762c NC_008596.1 Mycobrowser_v3 CDS 6405078 6405956 . - 0 MSMEG_6341 MSMEG_6341 6-phosphogluconate dehydrogenase, NAD-binding identified by match to protein family HMM PF01210; match to protein family HMM PF03446; match to protein family HMM PF03807 A0R5X0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6406923 6407252 . + 0 MSMEG_6344 MSMEG_6344 transcriptional regulator identified by match to protein family HMM PF01638 A0R5X2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6421742 6422551 . + 0 MSMEG_6366 MSMEG_6366 O-antigen export system, ATP-binding protein identified by match to protein family HMM PF00005 A0R5Z1 No unknown Rv3781 Rv3781 NC_008596.1 Mycobrowser_v3 CDS 6422538 6423446 . + 0 MSMEG_6367 MSMEG_6367 glycosyl transferase, group 2 family protein identified by match to protein family HMM PF00535 A0R5Z2 No unknown Rv3782 Rv3782 NC_008596.1 Mycobrowser_v3 CDS 6423443 6424273 . + 0 MSMEG_6369 MSMEG_6369 O-antigen export system, permease protein identified by match to protein family HMM PF01061 A0R5Z3 No unknown Rv3783 Rv3783 NC_008596.1 Mycobrowser_v3 CDS 6424261 6424665 . - 0 MSMEG_6368 MSMEG_6368 DNA-binding protein A0R5Z4 No unknown Rv3129 Rv3129 NC_008596.1 Mycobrowser_v3 CDS 6425285 6426694 . + 0 MSMEG_6371 MSMEG_6371 GntR-family protein regulator identified by match to protein family HMM PF00155; match to protein family HMM PF00392 A0R5Z6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6426713 6427120 . + 0 MSMEG_6372 MSMEG_6372 membrane protein identified by match to protein family HMM PF04138 A0R5Z7 No unknown Rv3789 Rv3789 NC_008596.1 Mycobrowser_v3 CDS 6427130 6428068 . - 0 MSMEG_6373 MSMEG_6373 conserved hypothetical protein identified by match to protein family HMM PF05853 A0R5Z8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6428080 6429102 . - 0 MSMEG_6374 panE 2-dehydropantoate 2-reductase identified by match to protein family HMM PF02558; match to protein family HMM PF03721; match to protein family HMM TIGR00745 A0R5Z9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6429099 6430376 . - 0 MSMEG_6375 MSMEG_6375 transporter, major facilitator family protein identified by match to protein family HMM PF07690 A0R600 No unknown NC_008596.1 Mycobrowser_v3 CDS 6430444 6431502 . - 0 MSMEG_6376 MSMEG_6376 transcriptional regulator LacI family protein identified by match to protein family HMM PF00356; match to protein family HMM PF00532 A0R601 No unknown NC_008596.1 Mycobrowser_v3 CDS 6431722 6432624 . + 0 MSMEG_6378 MSMEG_6378 senescence marker protein-30 identified by match to protein family HMM PF03758 A0R603 No unknown NC_008596.1 Mycobrowser_v3 CDS 6432650 6433981 . + 0 MSMEG_6379 MSMEG_6379 transporter, major facilitator family protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0R604 No unknown NC_008596.1 Mycobrowser_v3 CDS 6434002 6434412 . - 0 MSMEG_6380 MSMEG_6380 hypothetical protein identified by Glimmer2; putative A0R605 No unknown NC_008596.1 Mycobrowser_v3 CDS 1545377 1545797 . - 0 MSMEG_1449 MSMEG_1449 fasciclin domain protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF02469 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6489515 6490300 . + 0 MSMEG_6419 MSMEG_6419 conserved hypothetical protein A0R644 No unknown Rv3839 Rv3839 NC_008596.1 Mycobrowser_v3 CDS 6434939 6436762 . - 0 MSMEG_6381 MSMEG_6381 conserved hypothetical protein identified by match to protein family HMM PF06259 A0R606 No unknown NC_008596.1 Mycobrowser_v3 CDS 6436944 6438350 . + 0 MSMEG_6382 MSMEG_6382 oxidoreductase, FAD-binding identified by match to protein family HMM PF01565 A0R607 No unknown Rv3790 Rv3790 NC_008596.1 Mycobrowser_v3 CDS 6438415 6438876 . + 0 MSMEG_6383 MSMEG_6383 transcription regulator FurA identified by match to protein family HMM PF01475 A0R608 No unknown Rv1909c Rv1909c NC_008596.1 Mycobrowser_v3 CDS 6441262 6442026 . + 0 MSMEG_6385 MSMEG_6385 putative oxidoreductase in MprA 5'region identified by match to protein family HMM PF00106 A0R610 No unknown Rv3791 Rv3791 NC_008596.1 Mycobrowser_v3 CDS 6442032 6443906 . + 0 MSMEG_6386 MSMEG_6386 membrane protein A0R611 No unknown Rv3792 Rv3792 NC_008596.1 Mycobrowser_v3 CDS 6443929 6447153 . + 0 MSMEG_6387 MSMEG_6387 probable arabinosyltransferase A identified by match to protein family HMM PF04602 A0R612 No unknown Rv3793 Rv3793 NC_008596.1 Mycobrowser_v3 CDS 6447287 6450529 . + 0 MSMEG_6388 MSMEG_6388 probable arabinosyltransferase B identified by match to protein family HMM PF04602 A0R613 No unknown Rv3794 Rv3794 NC_008596.1 Mycobrowser_v3 CDS 6472402 6472944 . - 0 MSMEG_6402 MSMEG_6402 PAP2 superfamily protein identified by match to protein family HMM PF01569 A0R627 No unknown Rv3807c Rv3807c NC_008596.1 Mycobrowser_v3 CDS 6487771 6488457 . - 0 MSMEG_6416 MSMEG_6416 phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 A0R642 No unknown Rv3837c Rv3837c NC_008596.1 Mycobrowser_v3 CDS 6450526 6453774 . + 0 MSMEG_6389 MSMEG_6389 probable arabinosyltransferase A identified by match to protein family HMM PF04602 A0R614 No unknown Rv3795 Rv3795 NC_008596.1 Mycobrowser_v3 CDS 6453932 6455158 . + 0 MSMEG_6390 MSMEG_6390 transporter, major facilitator family protein identified by match to protein family HMM PF05977; match to protein family HMM PF07690 A0R615 No unknown NC_008596.1 Mycobrowser_v3 CDS 1639029 1640899 . + 0 MSMEG_1549 MSMEG_1549 glycerol dehydratase reactivation factor large subunit; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6455190 6456743 . - 0 MSMEG_6391 MSMEG_6391 propionyl-CoA carboxylase beta chain identified by match to protein family HMM PF01039 A0R616 No unknown Rv3799c Rv3799c NC_008596.1 Mycobrowser_v3 CDS 6456740 6462190 . - 0 MSMEG_6392 MSMEG_6392 polyketide synthase identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801 A0R617 No unknown Rv3800c Rv3800c NC_008596.1 Mycobrowser_v3 CDS 6462325 6464217 . - 0 MSMEG_6393 MSMEG_6393 acyl-CoA synthase identified by match to protein family HMM PF00501 A0R618 No unknown Rv3801c Rv3801c NC_008596.1 Mycobrowser_v3 CDS 6464462 6465475 . - 0 MSMEG_6394 MSMEG_6394 conserved hypothetical protein A0R619 No unknown Rv3802c Rv3802c NC_008596.1 Mycobrowser_v3 CDS 6466034 6466936 . - 0 MSMEG_6396 MSMEG_6396 antigen 85-C identified by match to protein family HMM PF00756 A0R621 No unknown Rv3803c Rv3803c NC_008596.1 Mycobrowser_v3 CDS 6466940 6467110 . - 0 MSMEG_6397 MSMEG_6397 hypothetical protein identified by Glimmer2; putative A0R622 No unknown NC_008596.1 Mycobrowser_v3 CDS 6467091 6468098 . - 0 MSMEG_6398 MSMEG_6398 antigen 85-A identified by match to protein family HMM PF00756 A0R623 No unknown Rv1886c,Rv3804c Rv1886c,Rv3804c NC_008596.1 Mycobrowser_v3 CDS 6468235 6469248 . - 0 MSMEG_6399 MSMEG_6399 antigen 85-C identified by match to protein family HMM PF00756 A0R624 No unknown NC_008596.1 Mycobrowser_v3 CDS 6469392 6471329 . - 0 MSMEG_6400 MSMEG_6400 probable conserved transmembrane protein A0R625 No unknown Rv3805c Rv3805c NC_008596.1 Mycobrowser_v3 CDS 6471409 6472365 . - 0 MSMEG_6401 MSMEG_6401 prenyltransferase, UbiA family protein identified by match to protein family HMM PF01040 A0R626 No unknown Rv3806c Rv3806c NC_008596.1 Mycobrowser_v3 CDS 6472941 6474881 . - 0 MSMEG_6403 MSMEG_6403 bifunctional udp-galactofuranosyl transferase glft A0R628 No unknown Rv3808c Rv3808c NC_008596.1 Mycobrowser_v3 CDS 6559895 6560428 . - 0 MSMEG_6497 MSMEG_6497 hypothetical protein identified by Glimmer2; putative A0R6C2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6474878 6476116 . - 0 MSMEG_6404 glf UDP-galactopyranose mutase identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031 A0R629 No unknown Rv3809c Rv3809c NC_008596.1 Mycobrowser_v3 CDS 6476344 6477261 . + 0 MSMEG_6405 MSMEG_6405 Erp protein A0R630 No unknown Rv3810 Rv3810 NC_008596.1 Mycobrowser_v3 CDS 6477408 6479018 . + 0 MSMEG_6406 MSMEG_6406 N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01510 A0R631 No unknown Rv3811 Rv3811 NC_008596.1 Mycobrowser_v3 CDS 6479076 6479900 . - 0 MSMEG_6407 MSMEG_6407 Cof-like hydrolase identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484 A0R632 No unknown Rv3813c Rv3813c NC_008596.1 Mycobrowser_v3 CDS 6479897 6480658 . - 0 MSMEG_6408 MSMEG_6408 acyltransferase family protein identified by match to protein family HMM PF01553 A0R633 No unknown Rv3815c Rv3815c NC_008596.1 Mycobrowser_v3 CDS 6480665 6481456 . - 0 MSMEG_6409 MSMEG_6409 acyltransferase family protein identified by match to protein family HMM PF01553 A0R634 No unknown Rv3816c Rv3816c NC_008596.1 Mycobrowser_v3 CDS 6481598 6483154 . + 0 MSMEG_6410 MSMEG_6410 Rieske 2Fe-2S family protein identified by match to protein family HMM PF00355 A0R635 No unknown Rv3818 Rv3818 NC_008596.1 Mycobrowser_v3 CDS 6483151 6483483 . + 0 MSMEG_6411 MSMEG_6411 conserved hypothetical protein A0R636 No unknown Rv3819 Rv3819 NC_008596.1 Mycobrowser_v3 CDS 6483487 6484305 . - 0 MSMEG_6412 MSMEG_6412 conserved hypothetical protein A0R637 No unknown NC_008596.1 Mycobrowser_v3 CDS 6484302 6485555 . - 0 MSMEG_6413 serS seryl-tRNA synthetase identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 A0R638 No unknown Rv3834c Rv3834c NC_008596.1 Mycobrowser_v3 CDS 6485712 6487163 . + 0 MSMEG_6414 MSMEG_6414 conserved hypothetical protein A0R639 No unknown Rv3835 Rv3835 NC_008596.1 Mycobrowser_v3 CDS 6487173 6487517 . + 0 MSMEG_6415 MSMEG_6415 conserved hypothetical protein identified by match to protein family HMM PF06262 A0R640 No unknown Rv3836 Rv3836 NC_008596.1 Mycobrowser_v3 CDS 6487586 6487774 . + 0 MSMEG_6417 MSMEG_6417 conserved hypothetical protein A0R641 No unknown NC_008596.1 Mycobrowser_v3 CDS 6514667 6515059 . + 0 MSMEG_6451 MSMEG_6451 transcriptional regulator, ArsR family protein identified by match to protein family HMM PF01022 A0R676 No unknown Rv0081 Rv0081 NC_008596.1 Mycobrowser_v3 CDS 6488454 6489386 . - 0 MSMEG_6418 MSMEG_6418 prephenate dehydratase identified by match to protein family HMM PF00800; match to protein family HMM PF01842 A0R643 No unknown Rv3838c Rv3838c NC_008596.1 Mycobrowser_v3 CDS 6490613 6492484 . + 0 MSMEG_6421 MSMEG_6421 transcriptional regulator identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350 A0R646 No unknown NC_008596.1 Mycobrowser_v3 CDS 6492624 6493169 . + 0 MSMEG_6422 MSMEG_6422 ferritin family protein identified by match to protein family HMM PF00210 A0R647 No unknown Rv3841 Rv3841 NC_008596.1 Mycobrowser_v3 CDS 6493183 6494028 . - 0 MSMEG_6423 MSMEG_6423 Glycerophosphoryl diester phosphodiesterase family protein identified by match to protein family HMM PF03009 A0R648 No unknown Rv3842c Rv3842c NC_008596.1 Mycobrowser_v3 CDS 6507325 6507978 . + 0 MSMEG_6441 MSMEG_6441 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R666 No unknown Rv3855 Rv3855 NC_008596.1 Mycobrowser_v3 CDS 6494033 6495190 . - 0 MSMEG_6424 MSMEG_6424 probable conserved transmembrane protein A0R649 No unknown Rv3843c Rv3843c NC_008596.1 Mycobrowser_v3 CDS 6495219 6495560 . - 0 MSMEG_6425 MSMEG_6425 rhodanese-like domain protein identified by match to protein family HMM PF00581 A0R650 No unknown NC_008596.1 Mycobrowser_v3 CDS 6496047 6496190 . + 0 MSMEG_6426 MSMEG_6426 conserved hypothetical protein A0R651 No unknown NC_008596.1 Mycobrowser_v3 CDS 6496331 6496954 . + 0 MSMEG_6427 MSMEG_6427 [Mn] superoxide dismutase identified by match to protein family HMM PF00081; match to protein family HMM PF02777 A0R652 No unknown Rv3846 Rv3846 NC_008596.1 Mycobrowser_v3 CDS 6497167 6497700 . + 0 MSMEG_6428 MSMEG_6428 conserved hypothetical protein A0R653 No unknown Rv3847 Rv3847 NC_008596.1 Mycobrowser_v3 CDS 6497733 6497888 . - 0 MSMEG_6429 MSMEG_6429 hypothetical protein identified by Glimmer2; putative A0R654 No unknown NC_008596.1 Mycobrowser_v3 CDS 6498318 6500012 . - 0 MSMEG_6430 MSMEG_6430 hypothetical protein identified by Glimmer2; putative A0R655 No unknown NC_008596.1 Mycobrowser_v3 CDS 6498402 6498830 . + 0 MSMEG_6431 MSMEG_6431 conserved hypothetical protein A0R656 No unknown Rv3849 Rv3849 NC_008596.1 Mycobrowser_v3 CDS 6500009 6500470 . - 0 MSMEG_6432 MSMEG_6432 conserved hypothetical protein A0R657 No unknown NC_008596.1 Mycobrowser_v3 CDS 6077129 6078624 . + 0 MSMEG_6013 fadD probable fatty-acid-coa ligase fadd3 (fatty-acid-coa synthetase); this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00501 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6500573 6501679 . - 0 MSMEG_6433 MSMEG_6433 hypothetical protein identified by Glimmer2; putative A0R658 No unknown NC_008596.1 Mycobrowser_v3 CDS 6501891 6502547 . + 0 MSMEG_6434 MSMEG_6434 conserved hypothetical protein A0R659 No unknown Rv3850 Rv3850 NC_008596.1 Mycobrowser_v3 CDS 6502555 6503088 . + 0 MSMEG_6435 MSMEG_6435 hypothetical protein identified by Glimmer2; putative A0R660 No unknown NC_008596.1 Mycobrowser_v3 CDS 6503125 6503676 . + 0 MSMEG_6436 MSMEG_6436 copper resistance protein CopC identified by match to protein family HMM PF04234 A0R661 No unknown NC_008596.1 Mycobrowser_v3 CDS 6560543 6560836 . + 0 MSMEG_6498 MSMEG_6498 hypothetical protein identified by Glimmer2; putative A0R6C3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6503688 6504617 . + 0 MSMEG_6437 MSMEG_6437 copper resistance protein D identified by match to protein family HMM PF05425 A0R662 No unknown NC_008596.1 Mycobrowser_v3 CDS 6504708 6505196 . + 0 MSMEG_6438 MSMEG_6438 hypothetical protein identified by Glimmer2; putative A0R663 No unknown NC_008596.1 Mycobrowser_v3 CDS 6505226 6505705 . + 0 MSMEG_6439 MSMEG_6439 regulator of ribonuclease activity A identified by match to protein family HMM PF03737; match to protein family HMM TIGR01935 A0R664 No unknown Rv3853 Rv3853 NC_008596.1 Mycobrowser_v3 CDS 6505769 6507247 . - 0 MSMEG_6440 MSMEG_6440 monooxygenase, flavin-binding family protein A0R665 No unknown Rv3854c Rv3854c NC_008596.1 Mycobrowser_v3 CDS 6536834 6537058 . + 0 MSMEG_6472 MSMEG_6472 hypothetical protein identified by Glimmer2; putative A0R697 No unknown NC_008596.1 Mycobrowser_v3 CDS 6508015 6509226 . + 0 MSMEG_6443 dinP DNA polymerase IV identified by match to protein family HMM PF00817 A0R667 No unknown NC_008596.1 Mycobrowser_v3 CDS 6509223 6509585 . - 0 MSMEG_6442 MSMEG_6442 integral membrane protein A0R668 No unknown NC_008596.1 Mycobrowser_v3 CDS 6509624 6509908 . + 0 MSMEG_6444 MSMEG_6444 YiaAB two helix domain protein A0R669 No unknown NC_008596.1 Mycobrowser_v3 CDS 6509909 6510913 . - 0 MSMEG_6445 MSMEG_6445 PHP domain protein identified by match to protein family HMM PF02811 A0R670 No unknown Rv3856c Rv3856c NC_008596.1 Mycobrowser_v3 CDS 6511011 6512072 . + 0 MSMEG_6446 MSMEG_6446 hypothetical protein identified by Glimmer2; putative A0R671 No unknown NC_008596.1 Mycobrowser_v3 CDS 6512085 6512408 . + 0 MSMEG_6447 MSMEG_6447 hypothetical protein identified by Glimmer2; putative A0R672 No unknown NC_008596.1 Mycobrowser_v3 CDS 6512567 6512938 . - 0 MSMEG_6448 MSMEG_6448 hypothetical protein identified by Glimmer2; putative A0R673 No unknown NC_008596.1 Mycobrowser_v3 CDS 6512612 6512932 . + 0 MSMEG_6449 MSMEG_6449 conserved hypothetical protein A0R674 No unknown NC_008596.1 Mycobrowser_v3 CDS 6512987 6514384 . + 0 MSMEG_6450 MSMEG_6450 hypothetical protein identified by Glimmer2; putative A0R675 No unknown NC_008596.1 Mycobrowser_v3 CDS 6515062 6516696 . + 0 MSMEG_6453 MSMEG_6453 sulfate permease identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740 A0R677 No unknown NC_008596.1 Mycobrowser_v3 CDS 6532006 6532779 . + 0 MSMEG_6466 MSMEG_6466 aquaporin Z identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861 A0R691 No unknown NC_008596.1 Mycobrowser_v3 CDS 6516693 6518045 . - 0 MSMEG_6452 MSMEG_6452 [NADP+] succinate-semialdehyde dehydrogenase identified by match to protein family HMM PF00171 A0R678 No unknown NC_008596.1 Mycobrowser_v3 CDS 6518199 6519053 . + 0 MSMEG_6454 MSMEG_6454 conserved hypothetical protein identified by match to protein family HMM PF00296 A0R679 No unknown NC_008596.1 Mycobrowser_v3 CDS 6519063 6519647 . - 0 MSMEG_6455 MSMEG_6455 conserved hypothetical protein A0R680 No unknown Rv0787 Rv0787 NC_008596.1 Mycobrowser_v3 CDS 6519757 6519897 . - 0 MSMEG_6456 MSMEG_6456 conserved hypothetical protein A0R681 No unknown NC_008596.1 Mycobrowser_v3 CDS 6520166 6520669 . + 0 MSMEG_6457 MSMEG_6457 oxidoreductase molybdopterin binding domain, putative identified by match to protein family HMM PF00174 A0R682 No unknown NC_008596.1 Mycobrowser_v3 CDS 6579893 6580066 . - 0 MSMEG_6516 MSMEG_6516 hypothetical protein identified by Glimmer2; putative A0R6E2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6520673 6522139 . - 0 MSMEG_6458 MSMEG_6458 glutamate synthase, small subunit identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01317 A0R683 No unknown Rv3858c Rv3858c NC_008596.1 Mycobrowser_v3 CDS 6522132 6526760 . - 0 MSMEG_6459 MSMEG_6459 ferredoxin-dependent glutamate synthase 1 identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898 A0R684 No unknown Rv3859c Rv3859c NC_008596.1 Mycobrowser_v3 CDS 6526677 6526865 . + 0 MSMEG_6460 MSMEG_6460 hypothetical protein identified by Glimmer2; putative A0R685 No unknown NC_008596.1 Mycobrowser_v3 CDS 6526946 6527449 . - 0 MSMEG_6461 MSMEG_6461 hypothetical protein identified by Glimmer2; putative A0R686 No unknown NC_008596.1 Mycobrowser_v3 CDS 6527168 6528490 . + 0 MSMEG_6462 MSMEG_6462 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6118443 6120448 . - 0 MSMEG_6051 MSMEG_6051 ABC transporter protein, transmembrane protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00950 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6528498 6529199 . - 0 MSMEG_6463 MSMEG_6463 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QNY0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6529689 6530489 . + 0 MSMEG_6464 MSMEG_6464 conserved hypothetical protein identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369 A0R689 No unknown NC_008596.1 Mycobrowser_v3 CDS 6530521 6531897 . + 0 MSMEG_6465 MSMEG_6465 chloride channel identified by match to protein family HMM PF00654 A0R690 No unknown Rv0143c Rv0143c NC_008596.1 Mycobrowser_v3 CDS 6532853 6533404 . - 0 MSMEG_6467 MSMEG_6467 starvation-induced DNA protecting protein identified by match to protein family HMM PF00210 A0R692 No unknown NC_008596.1 Mycobrowser_v3 CDS 6533466 6534350 . - 0 MSMEG_6468 MSMEG_6468 conserved hypothetical protein A0R693 No unknown Rv0142 Rv0142 NC_008596.1 Mycobrowser_v3 CDS 6534409 6534834 . - 0 MSMEG_6469 MSMEG_6469 conserved hypothetical protein identified by match to protein family HMM PF04248 A0R694 No unknown Rv0140 Rv0140 NC_008596.1 Mycobrowser_v3 CDS 6535030 6535236 . + 0 MSMEG_6470 MSMEG_6470 hypothetical protein identified by Glimmer2; putative A0R695 No unknown NC_008596.1 Mycobrowser_v3 CDS 6535287 6536726 . - 0 MSMEG_6471 MSMEG_6471 glycine/D-amino acid oxidase identified by match to protein family HMM PF01266 A0R696 No unknown NC_008596.1 Mycobrowser_v3 CDS 6537143 6537961 . - 0 MSMEG_6473 MSMEG_6473 tetracenomycin polyketide synthesis O-methyltransferase TcmP identified by match to protein family HMM PF02409 A0R698 No unknown NC_008596.1 Mycobrowser_v3 CDS 6538024 6539046 . - 0 MSMEG_6474 MSMEG_6474 nucleoside-diphosphate-sugar epimerase identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993 A0R699 No unknown Rv0139 Rv0139 NC_008596.1 Mycobrowser_v3 CDS 6539043 6539543 . - 0 MSMEG_6475 MSMEG_6475 conserved hypothetical protein A0R6A0 No unknown Rv0138 Rv0138 NC_008596.1 Mycobrowser_v3 CDS 6539586 6539978 . - 0 MSMEG_6476 MSMEG_6476 conserved hypothetical protein A0R6A1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6540054 6540569 . + 0 MSMEG_6477 msrA methionine-S-sulfoxide reductase identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401 A0R6A2 No unknown Rv0137c Rv0137c NC_008596.1 Mycobrowser_v3 CDS 6540573 6541916 . - 0 MSMEG_6478 MSMEG_6478 putative cytochrome P450 135B1 identified by match to protein family HMM PF00067 A0R6A3 No unknown Rv0136 Rv0136 NC_008596.1 Mycobrowser_v3 CDS 6542006 6542638 . + 0 MSMEG_6480 MSMEG_6480 putative transcriptional regulatory protein identified by match to protein family HMM PF00440 A0R6A4 No unknown Rv0135c Rv0135c NC_008596.1 Mycobrowser_v3 CDS 6542615 6543184 . - 0 MSMEG_6479 MSMEG_6479 putative transcriptional regulator identified by match to protein family HMM PF00440 A0R6A5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6123276 6124482 . - 0 MSMEG_6056 MSMEG_6056 transposase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6543906 6544952 . - 0 MSMEG_6481 MSMEG_6481 conserved hypothetical protein A0R6A7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6544983 6545705 . - 0 MSMEG_6483 MSMEG_6483 methyltransferase type 11 A0R6A8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6545699 6546940 . - 0 MSMEG_6484 MSMEG_6484 glycosyl transferase identified by match to protein family HMM PF00534 A0R6A9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6547061 6547516 . - 0 MSMEG_6485 MSMEG_6485 ATP binding protein identified by match to protein family HMM PF01243 A0R6B0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6547545 6548576 . - 0 MSMEG_6486 MSMEG_6486 oxidoreductase, FAD/FMN-binding identified by match to protein family HMM PF00724 A0R6B1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6548602 6549669 . - 0 MSMEG_6487 MSMEG_6487 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2, 4-dienoate decarboxylase identified by match to protein family HMM PF04909 A0R6B2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6549677 6550114 . - 0 MSMEG_6488 MSMEG_6488 conserved hypothetical protein A0R6B3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6550150 6551340 . - 0 MSMEG_6489 MSMEG_6489 2,6-dihydroxypyridine hydroxylase identified by match to protein family HMM PF01494 A0R6B4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6551337 6552680 . - 0 MSMEG_6490 MSMEG_6490 major facilitator superfamily protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0R6B5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6552753 6554252 . - 0 MSMEG_6491 MSMEG_6491 aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0R6B6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6554465 6556201 . + 0 MSMEG_6492 MSMEG_6492 GAF domain protein, putative identified by match to protein family HMM PF01590 A0R6B7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6556372 6557424 . + 0 MSMEG_6493 MSMEG_6493 hypothetical protein identified by Glimmer2; putative A0R6B8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6557421 6558251 . + 0 MSMEG_6494 MSMEG_6494 ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative identified by match to protein family HMM PF00528 A0R6B9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6654335 6654787 . + 0 MSMEG_6598 MSMEG_6598 6,7-dimethyl-8-ribityllumazine synthase identified by match to protein family HMM PF00885 A0R6M2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6558248 6559027 . + 0 MSMEG_6495 MSMEG_6495 ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit, putative identified by match to protein family HMM PF00528 A0R6C0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6559046 6559807 . + 0 MSMEG_6496 MSMEG_6496 nitrate/sulfonate/bicarbonate ABC transporter ATPase subunit identified by match to protein family HMM PF00005 A0R6C1 No unknown NC_008596.1 Mycobrowser_v3 CDS 1649882 1651289 . + 0 MSMEG_1562 MSMEG_1562 conserved hypothetical alanine and proline rich protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6560975 6561772 . + 0 MSMEG_6499 MSMEG_6499 conserved hypothetical protein identified by match to protein family HMM PF04248 A0R6C4 No unknown Rv1056 Rv1056 NC_008596.1 Mycobrowser_v3 CDS 6561852 6563714 . + 0 MSMEG_6500 MSMEG_6500 conserved hypothetical protein A0R6C5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6563711 6563923 . + 0 MSMEG_6501 MSMEG_6501 hypothetical protein identified by Glimmer2; putative A0R6C6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6563920 6564363 . + 0 MSMEG_6502 MSMEG_6502 conserved hypothetical protein A0R6C7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6564360 6565652 . + 0 MSMEG_6504 MSMEG_6504 conserved hypothetical protein A0R6C8,A4ZHT8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6565649 6566215 . - 0 MSMEG_6503 MSMEG_6503 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R6C9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6566306 6567010 . + 0 MSMEG_6505 MSMEG_6505 NfnB protein identified by match to protein family HMM PF00881 A0R6D0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6567028 6567579 . + 0 MSMEG_6506 MSMEG_6506 nicotinamidase/pyrazinamidase identified by match to protein family HMM PF00857 A0R6D1 No unknown Rv2043c Rv2043c NC_008596.1 Mycobrowser_v3 CDS 6567776 6569893 . + 0 MSMEG_6507 glgX glycogen debranching enzyme GlgX identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100 A0R6D2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6570166 6570633 . + 0 MSMEG_6508 MSMEG_6508 MarR-family protein transcriptional regulator identified by match to protein family HMM PF01047; match to protein family HMM PF03965 A0R6D3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6570630 6571499 . + 0 MSMEG_6509 MSMEG_6509 ABC-type drug export system, ATP-binding protein identified by match to protein family HMM PF00005 A0R6D4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6571489 6572292 . + 0 MSMEG_6510 MSMEG_6510 ABC-type drug export system, membrane protein identified by match to protein family HMM PF01061 A0R6D5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6586660 6587088 . + 0 MSMEG_6526 MSMEG_6526 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0R6F1 No unknown Rv0121c Rv0121c NC_008596.1 Mycobrowser_v3 CDS 6572351 6573508 . + 0 MSMEG_6511 MSMEG_6511 acyl-CoA dehydrogenase domain protein identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0R6D6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6573517 6574626 . + 0 MSMEG_6512 MSMEG_6512 acyl-CoA dehydrogenase domain protein identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028 A0R6D7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1697467 1698240 . - 0 MSMEG_1609 MSMEG_1609 beta-phosphoglucomutase hydrolase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR02009 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6574647 6576638 . - 0 MSMEG_6513 MSMEG_6513 membrane transport protein identified by match to protein family HMM PF07690 A0R6D8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6576690 6578015 . - 0 MSMEG_6514 MSMEG_6514 trehalose synthase-fused probable maltokinase A0R6D9 No unknown Rv0127 Rv0127 NC_008596.1 Mycobrowser_v3 CDS 6578012 6579793 . - 0 MSMEG_6515 treS trehalose synthase identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456 A0R6E0 No unknown Rv0126 Rv0126 NC_008596.1 Mycobrowser_v3 CDS 6579767 6579907 . + 0 MSMEG_6517 MSMEG_6517 hypothetical protein identified by Glimmer2; putative A0R6E1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6580577 6581377 . + 0 MSMEG_6519 MSMEG_6519 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0R6E4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6581422 6582000 . + 0 MSMEG_6520 MSMEG_6520 orotate phosphoribosyltransferase identified by match to protein family HMM PF00156 A0R6E5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6582005 6583069 . - 0 MSMEG_6521 MSMEG_6521 sulfate/thiosulfate import ATP-binding protein CysA 2 identified by match to protein family HMM PF00005; match to protein family HMM PF03459 A0R6E6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6583066 6583887 . - 0 MSMEG_6522 MSMEG_6522 ABC transporter, inner membrane subunit identified by match to protein family HMM PF00528 A0R6E7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6583884 6584744 . - 0 MSMEG_6523 MSMEG_6523 ABC transporter, membrane spanning protein identified by match to protein family HMM PF00528 A0R6E8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6612275 6612889 . + 0 MSMEG_6556 MSMEG_6556 putative transcriptional regulator identified by match to protein family HMM PF00440 A0R6I0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6584753 6585904 . - 0 MSMEG_6524 MSMEG_6524 ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein A0R6E9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6586134 6586640 . + 0 MSMEG_6525 MSMEG_6525 hypothetical protein identified by Glimmer2; putative A0R6F0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6587093 6587698 . - 0 MSMEG_6527 MSMEG_6527 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R6F2 No unknown NC_008596.1 Mycobrowser_v3 CDS 1704885 1706848 . - 0 MSMEG_1616 MSMEG_1616 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6587895 6588647 . + 0 MSMEG_6528 MSMEG_6528 conserved hypothetical protein A0R6F3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6588644 6589393 . + 0 MSMEG_6529 MSMEG_6529 conserved hypothetical protein A0R6F4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6589413 6589988 . + 0 MSMEG_6530 MSMEG_6530 cytochrome c oxidase subunit III family protein identified by match to protein family HMM PF00510 A0R6F5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6589990 6590283 . + 0 MSMEG_6531 MSMEG_6531 conserved hypothetical protein A0R6F6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6590293 6590910 . + 0 MSMEG_6532 MSMEG_6532 transcriptional regulatory protein identified by match to protein family HMM PF00440 A0R6F7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6590911 6591837 . - 0 MSMEG_6533 MSMEG_6533 conserved hypothetical protein A0R6F8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6591922 6592053 . - 0 MSMEG_6534 MSMEG_6534 hypothetical protein identified by Glimmer2; putative A0R6F9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6681119 6682018 . - 0 MSMEG_6629 mdcH malonate decarboxylase, epsilon subunit identified by match to protein family HMM PF00698; match to protein family HMM TIGR03131 A0R6Q1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6592036 6594231 . + 0 MSMEG_6535 MSMEG_6535 translation elongation factor EF-G identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231 A0R6G0 No unknown Rv0120c Rv0120c NC_008596.1 Mycobrowser_v3 CDS 6594233 6594799 . - 0 MSMEG_6536 MSMEG_6536 carboxymuconolactone decarboxylase identified by match to protein family HMM PF02627 A0R6G1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6594900 6595475 . + 0 MSMEG_6537 MSMEG_6537 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R6G2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6595503 6596210 . + 0 MSMEG_6538 MSMEG_6538 3-oxoacyl-(acyl-carrier-protein) reductase, putative identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R6G3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6596379 6597620 . + 0 MSMEG_6540 MSMEG_6540 virulence factor Mce family protein identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996 A0R6G4 No unknown Rv0589 Rv0589 NC_008596.1 Mycobrowser_v3 CDS 6597610 6598509 . - 0 MSMEG_6539 MSMEG_6539 conserved hypothetical protein A0R6G5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6598543 6598893 . - 0 MSMEG_6541 MSMEG_6541 anti-sigma factor antagonist identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377 A0R6G6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6598890 6599987 . - 0 MSMEG_6542 MSMEG_6542 B12 binding domain protein identified by match to protein family HMM PF02310 A0R6G7 No unknown NC_008596.1 Mycobrowser_v3 CDS 1762408 1762995 . - 0 MSMEG_1667 MSMEG_1667 IS110 family transposase, truncation; identified by similarity to OMNI:MT3430 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6602127 6602834 . - 0 MSMEG_6545 MSMEG_6545 phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 A0R6G9 No unknown Rv3390 Rv3390 NC_008596.1 Mycobrowser_v3 CDS 6602836 6603639 . - 0 MSMEG_6546 MSMEG_6546 transcriptional regulatory protein identified by match to protein family HMM PF00165 A0R6H0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6603696 6604958 . + 0 MSMEG_6547 MSMEG_6547 amidohydrolase 2 identified by match to protein family HMM PF04909 A0R6H1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6604992 6605408 . - 0 MSMEG_6548 MSMEG_6548 Rieske iron-sulfur protein identified by match to protein family HMM PF00355 A0R6H2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6605424 6606014 . - 0 MSMEG_6549 MSMEG_6549 conserved hypothetical protein A0R6H3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6605939 6606169 . - 0 MSMEG_6550 MSMEG_6550 hypothetical protein identified by Glimmer2; putative A0R6H4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6606004 6606516 . - 0 MSMEG_6551 MSMEG_6551 hypothetical protein identified by Glimmer2; putative A0R6H5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6607155 6608885 . - 0 MSMEG_6553 MSMEG_6553 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0R6H7 No unknown Rv1349 Rv1349 NC_008596.1 Mycobrowser_v3 CDS 6608882 6611464 . - 0 MSMEG_6554 MSMEG_6554 hypothetical ABC transporter ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM PF00970; match to protein family HMM PF04954; match to protein family HMM PF08021 A0R6H8 No unknown Rv1348 Rv1348 NC_008596.1 Mycobrowser_v3 CDS 6611464 6612174 . - 0 MSMEG_6555 MSMEG_6555 transcriptional regulator, TetR family protein, putative A0R6H9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6612886 6613542 . + 0 MSMEG_6558 MSMEG_6558 putative enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R6I1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6613539 6614441 . - 0 MSMEG_6557 MSMEG_6557 dehydrogenase identified by match to protein family HMM PF00106 A0R6I2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6614824 6615246 . - 0 MSMEG_6560 MSMEG_6560 acyl dehydratase identified by match to protein family HMM PF01796 A0R6I4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6615249 6616469 . - 0 MSMEG_6561 MSMEG_6561 nonspecific lipid-transfer protein A0R6I5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6616478 6618736 . - 0 MSMEG_6562 MSMEG_6562 putative acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0R6I6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6618733 6619743 . - 0 MSMEG_6563 MSMEG_6563 dihydrokaempferol 4-reductase identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993 A0R6I7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6619839 6620408 . + 0 MSMEG_6564 MSMEG_6564 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R6I8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6620411 6621100 . - 0 MSMEG_6565 MSMEG_6565 conserved hypothetical protein A0R6I9 No unknown Rv0730 Rv0730 NC_008596.1 Mycobrowser_v3 CDS 6621103 6621258 . - 0 MSMEG_6566 MSMEG_6566 hypothetical protein identified by Glimmer2; putative A0R6J0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6621461 6622585 . + 0 MSMEG_6568 MSMEG_6568 regulatory protein, LuxR, putative identified by match to protein family HMM PF00196 A0R6J1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6622524 6623729 . - 0 MSMEG_6567 MSMEG_6567 iron-dependent peroxidase identified by match to protein family HMM PF04261; match to protein family HMM TIGR01409; match to protein family HMM TIGR01413 A0R6J2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6623722 6624216 . - 0 MSMEG_6569 MSMEG_6569 conserved hypothetical protein identified by match to protein family HMM PF04314 A0R6J3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6624209 6625588 . - 0 MSMEG_6570 MSMEG_6570 integral membrane protein identified by match to protein family HMM PF03413; match to protein family HMM PF03929 A0R6J4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6625702 6626244 . - 0 MSMEG_6571 MSMEG_6571 conserved hypothetical protein A0R6J5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6626297 6626989 . + 0 MSMEG_6572 MSMEG_6572 methyltransferase A0R6J6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6626995 6628662 . - 0 MSMEG_6573 MSMEG_6573 conserved hypothetical protein identified by match to protein family HMM PF02720 A0R6J7 No unknown Rv1128c,Rv1148c,Rv1702c Rv1128c,Rv1148c,Rv1702c NC_008596.1 Mycobrowser_v3 CDS 6628925 6629410 . + 0 MSMEG_6574 MSMEG_6574 conserved hypothetical protein A0R6J8 No unknown Rv2717c Rv2717c NC_008596.1 Mycobrowser_v3 CDS 6659358 6659954 . + 0 MSMEG_6605 MSMEG_6605 transcriptional regulatory protein identified by match to protein family HMM PF03551 A0R6M7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6629407 6630636 . + 0 MSMEG_6575 MSMEG_6575 beta-lactamase identified by match to protein family HMM PF00144 A0R6J9 No unknown Rv3775 Rv3775 NC_008596.1 Mycobrowser_v3 CDS 6630646 6631086 . - 0 MSMEG_6576 MSMEG_6576 pyridoxamine 5'-phosphate oxidase family protein identified by match to protein family HMM PF01243 A0R6K0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6631138 6632682 . + 0 MSMEG_6577 MSMEG_6577 methylmalonyl-CoA carboxyltransferase 12S subunit identified by match to protein family HMM PF01039 A0R6K1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6633239 6633637 . + 0 MSMEG_6579 MSMEG_6579 conserved hypothetical protein A0R6K3,A4ZHT9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6633752 6634201 . + 0 MSMEG_6580 MSMEG_6580 transcriptional regulator family protein identified by match to protein family HMM PF01638 A0R6K4 No unknown Rv3095 Rv3095 NC_008596.1 Mycobrowser_v3 CDS 6634284 6634952 . + 0 MSMEG_6581 MSMEG_6581 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106 A0R6K5,A4ZHU0 No unknown Rv3174 Rv3174 NC_008596.1 Mycobrowser_v3 CDS 6635047 6636249 . + 0 MSMEG_6583 MSMEG_6583 antigen 85-C identified by match to protein family HMM PF00756 A0R6K6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6636246 6637394 . - 0 MSMEG_6582 MSMEG_6582 pyridine nucleotide-disulphide oxidoreductase domain protein identified by match to protein family HMM PF00070; match to protein family HMM PF07992 A0R6K7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6637418 6638608 . + 0 MSMEG_6584 MSMEG_6584 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770 A0R6K8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6638601 6639872 . + 0 MSMEG_6585 MSMEG_6585 acyl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02771; match to protein family HMM PF08028 A0R6K9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6639920 6640762 . + 0 MSMEG_6586 MSMEG_6586 alpha/beta hydrolase, putative identified by match to protein family HMM PF00561 A0R6L0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6640759 6641664 . + 0 MSMEG_6588 MSMEG_6588 fumarylacetoacetate identified by match to protein family HMM PF01557 A0R6L1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6657780 6658817 . - 0 MSMEG_6602 MSMEG_6602 oxidoreductase identified by match to protein family HMM PF00296 A0R6M5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6641661 6645611 . - 0 MSMEG_6587 hrpA ATP-dependent helicase HrpA identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967 A0R6L2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6645663 6646724 . - 0 MSMEG_6589 MSMEG_6589 ISMsm5, transposase identified by similarity to GB:CAD18826.1 A0QPX1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6646800 6647195 . + 0 MSMEG_6590 MSMEG_6590 conserved hypothetical protein A0R6L4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6647198 6648052 . + 0 MSMEG_6592 MSMEG_6592 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0R6L5 No unknown NC_008596.1 Mycobrowser_v3 CDS 4052071 4053208 . - 0 MSMEG_3983 MSMEG_3983 L-carnitine dehydratase/bile acid-inducible protein F; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF02515 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6648028 6649758 . - 0 MSMEG_6591 MSMEG_6591 aminotransferase, class V family protein identified by match to protein family HMM PF00266 A0R6L6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6649755 6650522 . - 0 MSMEG_6593 MSMEG_6593 ATP-binding protein identified by match to protein family HMM PF00005 A0R6L7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6650515 6651408 . - 0 MSMEG_6594 MSMEG_6594 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726 A0R6L8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6651395 6652369 . - 0 MSMEG_6595 MSMEG_6595 secreted protein identified by match to protein family HMM PF00497 A0R6L9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6652518 6653426 . - 0 MSMEG_6596 MSMEG_6596 conserved hypothetical protein A0R6M0 No unknown Rv2172c Rv2172c NC_008596.1 Mycobrowser_v3 CDS 6653552 6654313 . + 0 MSMEG_6597 MSMEG_6597 hydrolase of the alpha/beta superfamily protein A0R6M1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6656133 6657125 . + 0 MSMEG_6600 MSMEG_6600 transposase identified by match to protein family HMM PF00665 A0R6M3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6657133 6657654 . - 0 MSMEG_6601 MSMEG_6601 hypothetical protein identified by Glimmer2; putative A0R6M4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6806973 6807458 . - 0 MSMEG_6760 MSMEG_6760 conserved hypothetical protein A0R731 No unknown NC_008596.1 Mycobrowser_v3 CDS 6659918 6660517 . - 0 MSMEG_6604 MSMEG_6604 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R6M8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6660569 6661243 . - 0 MSMEG_6606 MSMEG_6606 hypothetical protein identified by Glimmer2; putative A0R6M9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6661240 6662100 . - 0 MSMEG_6607 MSMEG_6607 hypothetical protein identified by Glimmer2; putative A0R6N0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6662097 6663047 . - 0 MSMEG_6608 MSMEG_6608 hypothetical protein identified by Glimmer2; putative A0R6N1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6663002 6663529 . + 0 MSMEG_6611 MSMEG_6611 hypothetical protein identified by Glimmer2; putative A0R6N2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6663038 6663502 . - 0 MSMEG_6609 MSMEG_6609 hypothetical protein identified by Glimmer2; putative A0R6N3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6663492 6664352 . - 0 MSMEG_6610 MSMEG_6610 protein of unknown function DUF58, putative A0R6N4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6664363 6665364 . - 0 MSMEG_6612 moxR ATPase, MoxR family protein identified by match to protein family HMM PF07726; match to protein family HMM PF07728 A0R6N5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6665394 6666287 . - 0 MSMEG_6613 MSMEG_6613 conserved hypothetical protein A0R6N6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6666377 6667543 . - 0 MSMEG_6614 MSMEG_6614 integral membrane protein identified by match to protein family HMM PF00149; match to protein family HMM TIGR01409 A0R6N7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6667571 6668242 . - 0 MSMEG_6615 MSMEG_6615 hypothetical protein identified by Glimmer2; putative A0R6N8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6668245 6669426 . - 0 MSMEG_6616 MSMEG_6616 S-(hydroxymethyl)glutathione dehydrogenase identified by match to protein family HMM PF00107 A0R6N9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6672072 6672791 . - 0 MSMEG_6617 MSMEG_6617 nudix hydrolase identified by match to protein family HMM PF00293 A0R6P0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6674114 6674437 . - 0 MSMEG_6620 MSMEG_6620 conserved hypothetical protein A0R6P1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6674557 6675408 . - 0 MSMEG_6621 MSMEG_6621 bacterial luciferase family protein identified by match to protein family HMM PF00296 A0R6P2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6675471 6676661 . + 0 MSMEG_6622 MSMEG_6622 cytochrome P450 monooxygenase identified by match to protein family HMM PF00067 A0R6P3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6807460 6807807 . - 0 MSMEG_6762 MSMEG_6762 transcriptional regulator identified by match to protein family HMM PF01022 A0R732 No unknown NC_008596.1 Mycobrowser_v3 CDS 6676667 6677446 . - 0 MSMEG_6623 MSMEG_6623 dehydrogenase identified by match to protein family HMM PF00106 A0R6P4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6677450 6678007 . - 0 MSMEG_6624 MSMEG_6624 conserved hypothetical protein A0R6P5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6678040 6678462 . - 0 MSMEG_6625 MSMEG_6625 glyoxalase family protein identified by match to protein family HMM PF00903 A0R6P6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6678469 6679242 . - 0 MSMEG_6626 MSMEG_6626 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106 A0R6P7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6679388 6680059 . + 0 MSMEG_6627 MSMEG_6627 nitroreductase family protein identified by match to protein family HMM PF00881 A0R6P8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6680121 6680732 . + 0 MSMEG_6628 MSMEG_6628 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R6P9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6680779 6681129 . + 0 MSMEG_6630 MSMEG_6630 glyoxalase family protein identified by match to protein family HMM PF00903 A0R6Q0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6682015 6682620 . - 0 MSMEG_6631 mdcG phosphoribosyl-dephospho-CoA transferase MdcG identified by match to protein family HMM TIGR03135 A0R6Q2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6682617 6684233 . - 0 MSMEG_6632 MSMEG_6632 beta subunit of malonate decarboxylase identified by match to protein family HMM PF01039; match to protein family HMM PF06833; match to protein family HMM TIGR03133; match to protein family HMM TIGR03134 A0R6Q3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6684230 6684538 . - 0 MSMEG_6633 mdcC malonate decarboxylase acyl carrier protein identified by match to protein family HMM PF06857; match to protein family HMM TIGR03130 A0R6Q4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6684526 6685389 . - 0 MSMEG_6634 mdcB triphosphoribosyl-dephospho-CoA synthase MdcB identified by match to protein family HMM PF01874; match to protein family HMM TIGR03132 A0R6Q5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6685394 6686005 . - 0 MSMEG_6635 MSMEG_6635 alpha subunit of malonate decarboxylase A0R6Q6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6686470 6687090 . - 0 MSMEG_6636 MSMEG_6636 [Mn] superoxide dismutase identified by match to protein family HMM PF00081; match to protein family HMM PF02777 A0R6Q7 No unknown Rv3846 Rv3846 NC_008596.1 Mycobrowser_v3 CDS 6687242 6687499 . + 0 MSMEG_6637 MSMEG_6637 hypothetical protein identified by Glimmer2; putative A0R6Q8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6687551 6689866 . - 0 MSMEG_6638 metE 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase identified by match to protein family HMM PF01717; match to protein family HMM TIGR01371 A0R6Q9 No unknown Rv1133c Rv1133c NC_008596.1 Mycobrowser_v3 CDS 6690221 6690898 . - 0 MSMEG_6639 MSMEG_6639 transcriptional regulator, GntR family protein, putative identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0R6R0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6690967 6692328 . + 0 MSMEG_6641 MSMEG_6641 nitrilotriacetate monooxygenase component A A0R6R2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6692329 6693528 . + 0 MSMEG_6642 MSMEG_6642 caib/baif family protein identified by match to protein family HMM PF02515 A0R6R3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6693546 6694457 . + 0 MSMEG_6644 MSMEG_6644 malyl-CoA lyase identified by match to protein family HMM PF03328 A0R6R4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6694441 6695859 . - 0 MSMEG_6643 MSMEG_6643 DNA-binding protein identified by match to protein family HMM PF01381; match to protein family HMM PF06114 A0R6R5 No unknown Rv1129c Rv1129c NC_008596.1 Mycobrowser_v3 CDS 4132099 4133308 . + 0 MSMEG_4060 MSMEG_4060 aspartate aminotransferase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00155 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6695968 6697482 . + 0 MSMEG_6645 MSMEG_6645 2-methylcitrate dehydratase 2 identified by match to protein family HMM PF03972 A0R6R6 No unknown Rv1130 Rv1130 NC_008596.1 Mycobrowser_v3 CDS 6697479 6698396 . + 0 MSMEG_6646 prpB methylisocitrate lyase identified by similarity to SP:Q8NSL2; match to protein family HMM TIGR02317 A0R6R7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6698393 6699523 . + 0 MSMEG_6647 MSMEG_6647 citrate synthase 2 identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800 A0R6R8 No unknown Rv1131 Rv1131 NC_008596.1 Mycobrowser_v3 CDS 6702915 6703805 . - 0 MSMEG_6649 MSMEG_6649 conserved hypothetical protein A0R6S0 No unknown Rv2172c Rv2172c NC_008596.1 Mycobrowser_v3 CDS 6704173 6704352 . + 0 MSMEG_6650 MSMEG_6650 hypothetical protein identified by Glimmer2; putative A0R6S1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6704571 6704684 . - 0 MSMEG_6651 MSMEG_6651 hypothetical protein identified by Glimmer2; putative A0R6S2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6704714 6705124 . - 0 MSMEG_6652 MSMEG_6652 hypothetical protein identified by Glimmer2; putative A0R6S3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6708371 6709774 . + 0 MSMEG_6654 MSMEG_6654 TnpC protein identified by match to protein family HMM PF01609 A0R6S4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6709869 6710645 . - 0 MSMEG_6655 MSMEG_6655 conserved hypothetical protein A0R6S5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6710711 6712219 . - 0 MSMEG_6656 MSMEG_6656 conserved hypothetical protein identified by match to protein family HMM PF02899 A0R6S6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6712209 6713342 . - 0 MSMEG_6657 MSMEG_6657 alpha subunit of malonate decarboxylase A0R6S7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6713339 6714169 . - 0 MSMEG_6658 MSMEG_6658 alpha/beta hydrolase fold identified by match to protein family HMM PF00561 A0R6S8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6754873 6755619 . + 0 MSMEG_6705 MSMEG_6705 regulatory protein identified by match to protein family HMM PF01614 A0R6X4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6714430 6715866 . + 0 MSMEG_6660 MSMEG_6660 permease, cytosine/purines, uracil, thiamine, allantoin family protein identified by match to protein family HMM PF02133 A0R6S9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6715856 6716116 . - 0 MSMEG_6659 MSMEG_6659 hypothetical protein identified by Glimmer2; putative A0R6T0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6716067 6716909 . + 0 MSMEG_6661 MSMEG_6661 O-methyltransferase, putative identified by match to protein family HMM PF02409 A0R6T1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6716996 6717841 . + 0 MSMEG_6662 MSMEG_6662 short chain dehydrogenase identified by match to protein family HMM PF00106 A0R6T2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6717845 6718588 . - 0 MSMEG_6663 MSMEG_6663 C5-O-methyltransferase A0R6T3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6718615 6719460 . - 0 MSMEG_6664 MSMEG_6664 methylenetetrahydrofolate reductase family protein, putative identified by match to protein family HMM PF02219 A0R6T4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6719637 6719912 . - 0 MSMEG_6665 MSMEG_6665 integral membrane protein A0R6T5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6719967 6720425 . - 0 MSMEG_6666 MSMEG_6666 conserved hypothetical protein A0R6T6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6720444 6720974 . - 0 MSMEG_6667 MSMEG_6667 conserved hypothetical protein A0R6T7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6732721 6733344 . - 0 MSMEG_6682 MSMEG_6682 RNA polymerase sigma-70 factor, putative identified by match to protein family HMM TIGR02937 A0R6V2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6721204 6722343 . + 0 MSMEG_6668 MSMEG_6668 ABC transporter, periplasmic substrate-binding protein, putative A0R6T8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6722340 6723293 . + 0 MSMEG_6669 MSMEG_6669 ABC transporter, permease protein identified by match to protein family HMM PF00528 A0R6T9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6723290 6724114 . + 0 MSMEG_6670 MSMEG_6670 ABC transporter, permease protein, putative identified by match to protein family HMM PF00528 A0R6U0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6724124 6725167 . + 0 MSMEG_6671 MSMEG_6671 sulfate/thiosulfate import ATP-binding protein CysA identified by match to protein family HMM PF00005; match to protein family HMM PF03459 A0R6U1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6725164 6726183 . + 0 MSMEG_6672 MSMEG_6672 type I phosphodiesterase / nucleotide pyrophosphatase superfamily protein identified by match to protein family HMM PF01663 A0R6U2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6726242 6727711 . + 0 MSMEG_6673 MSMEG_6673 6-aminohexanoate-cyclic-dimer hydrolase identified by match to protein family HMM PF01425 A0R6U3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6845184 6845597 . + 0 MSMEG_6797 MSMEG_6797 carboxymuconolactone decarboxylase identified by match to protein family HMM PF02627 A0R767 No unknown NC_008596.1 Mycobrowser_v3 CDS 6727730 6728623 . - 0 MSMEG_6674 MSMEG_6674 transcriptional regulator, LysR family protein identified by similarity to SP:P18561; match to protein family HMM PF00126; match to protein family HMM PF03466 A0R6U4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6728634 6728810 . - 0 MSMEG_6675 MSMEG_6675 hypothetical protein identified by Glimmer2; putative A0R6U5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6728933 6729547 . + 0 MSMEG_6676 MSMEG_6676 probable conserved transmembrane protein A0R6U6 No unknown Rv1733c Rv1733c NC_008596.1 Mycobrowser_v3 CDS 6729674 6730159 . + 0 MSMEG_6678 MSMEG_6678 conserved hypothetical protein A0R6U7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6730109 6730969 . - 0 MSMEG_6677 MSMEG_6677 transcriptional regulator, LysR family protein identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R6U8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6731106 6732014 . + 0 MSMEG_6679 MSMEG_6679 metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 A0R6U9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6732021 6732491 . - 0 MSMEG_6680 MSMEG_6680 integral membrane protein identified by match to protein family HMM PF04224 A0R6V0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6732488 6732724 . - 0 MSMEG_6681 MSMEG_6681 hypothetical protein identified by Glimmer2; putative A0R6V1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6747083 6747487 . - 0 MSMEG_6696 MSMEG_6696 hypothetical protein identified by Glimmer2; putative A0R6W6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6733486 6733965 . + 0 MSMEG_6683 MSMEG_6683 probable peroxiredoxin, putative identified by match to protein family HMM PF00578 A0R6V3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6733962 6735056 . + 0 MSMEG_6684 MSMEG_6684 agarase A0R6V4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6735247 6736599 . + 0 MSMEG_6685 gabT 4-aminobutyrate transaminase identified by match to protein family HMM PF00202; match to protein family HMM TIGR00700 A0R6V5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6736619 6737812 . + 0 MSMEG_6686 MSMEG_6686 glutaryl-CoA dehydrogenase identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 A0R6V6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6737809 6739272 . + 0 MSMEG_6687 MSMEG_6687 aldehyde dehydrogenase, thermostable identified by match to protein family HMM PF00171 A0R6V7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6739269 6740372 . + 0 MSMEG_6689 MSMEG_6689 CAIB/BAIF family protein identified by match to protein family HMM PF02515 A0R6V8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6753954 6754784 . + 0 MSMEG_6703 MSMEG_6703 N5,N10- methylenetetrahydromethanopterin reductase-related protein A0R6X3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6740365 6741876 . - 0 MSMEG_6688 MSMEG_6688 regulatory protein identified by match to protein family HMM PF07905 A0R6V9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6741873 6742682 . - 0 MSMEG_6690 MSMEG_6690 glutamine amidotransferase class-I identified by match to protein family HMM PF00117; match to protein family HMM PF07722 A0R6W0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6742679 6743425 . - 0 MSMEG_6691 MSMEG_6691 glutamine amidotransferase identified by match to protein family HMM PF00117; match to protein family HMM PF07722 A0R6W1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6743389 6744108 . - 0 MSMEG_6692 MSMEG_6692 putative glutamine-binding periplasmic protein identified by match to protein family HMM PF00497 A0R6W2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6744105 6745490 . - 0 MSMEG_6693 MSMEG_6693 glutamine synthetase III identified by match to protein family HMM PF00120 A0R6W3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6745496 6745684 . - 0 MSMEG_6694 MSMEG_6694 conserved domain protein A0R6W4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6745730 6746932 . - 0 MSMEG_6695 MSMEG_6695 cytochrome P450 identified by match to protein family HMM PF00067 A0R6W5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6747206 6748528 . + 0 MSMEG_6697 MSMEG_6697 IS1096, tnpA protein identified by similarity to GP:150005; match to protein family HMM PF01610 A0QNX9 No unknown Rv3798 Rv3798 NC_008596.1 Mycobrowser_v3 CDS 6748536 6749162 . - 0 MSMEG_6698 MSMEG_6698 IS1096, tnpR protein identified by similarity to GP:150004; match to protein family HMM PF07929 A0QRB6 No unknown NC_008596.1 Mycobrowser_v3 CDS 5416958 5419464 . - 0 MSMEG_5331 MSMEG_5331 UDP-glucoronosyl and UDP-glucosyl transferase family; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00201; match to protein family HMM PF04101 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6749195 6750064 . - 0 MSMEG_6699 MSMEG_6699 conserved hypothetical protein A0R6W9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6827190 6827630 . - 0 MSMEG_6778 MSMEG_6778 hypothetical protein identified by Glimmer2; putative A0R748 No unknown NC_008596.1 Mycobrowser_v3 CDS 6750061 6750798 . - 0 MSMEG_6700 MSMEG_6700 regulatory protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0R6X0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6750984 6752480 . + 0 MSMEG_6701 MSMEG_6701 amino acid permease identified by match to protein family HMM PF00324 A0R6X1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6752526 6753908 . + 0 MSMEG_6702 MSMEG_6702 [NADP+] succinate-semialdehyde dehydrogenase identified by match to protein family HMM PF00171 A0R6X2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6755616 6756428 . - 0 MSMEG_6704 MSMEG_6704 shikimate 5-dehydrogenase identified by match to protein family HMM PF01488 A0R6X5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6756213 6756533 . + 0 MSMEG_6707 MSMEG_6707 hypothetical protein identified by Glimmer2; putative A0R6X6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6756453 6756557 . - 0 MSMEG_6706 MSMEG_6706 hypothetical protein identified by Glimmer2; putative A0R6X7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6756549 6757454 . + 0 MSMEG_6708 MSMEG_6708 epoxide hydrolase identified by match to protein family HMM PF00561 A0R6X8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6757445 6758197 . + 0 MSMEG_6709 MSMEG_6709 cyclopentanol dehydrogenase identified by match to protein family HMM PF00106 A0R6X9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6758217 6759065 . + 0 MSMEG_6710 MSMEG_6710 hydrolase, alpha/beta fold family protein identified by match to protein family HMM PF00561 A0R6Y0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6759120 6760487 . - 0 MSMEG_6711 MSMEG_6711 4-hydroxybenzoate transporter identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690 A0R6Y1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6773260 6773889 . - 0 MSMEG_6726 MSMEG_6726 ABC transporter, permease protein A0R6Z6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6760497 6761582 . - 0 MSMEG_6712 MSMEG_6712 maleylacetate reductase identified by match to protein family HMM PF00465 A0R6Y2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6761579 6762454 . - 0 MSMEG_6713 MSMEG_6713 hydroxyquinol 1,2-dioxygenase identified by match to protein family HMM PF00775; match to protein family HMM PF04444 A0R6Y3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6762451 6763068 . - 0 MSMEG_6714 MSMEG_6714 conserved hypothetical protein A0R6Y4 No unknown NC_008596.1 Mycobrowser_v3 CDS 1814987 1815334 . + 0 MSMEG_1719 MSMEG_1719 This gene is disrupted by an IS element.; IS3 family element, transposase orfB, interruption-C; identified by similarity to GP:15619023 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5423270 5423613 . - 0 MSMEG_5337 MSMEG_5337 regulatory protein, FmdB family; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM TIGR02605 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6763271 6764110 . + 0 MSMEG_6715 MSMEG_6715 AP endonuclease, family protein 2 identified by match to protein family HMM PF01261 A0R6Y5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6764137 6764958 . + 0 MSMEG_6716 MSMEG_6716 AP endonuclease, family protein 2 identified by match to protein family HMM PF01261 A0R6Y6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6764976 6766046 . + 0 MSMEG_6717 MSMEG_6717 oxidoreductase, Gfo/Idh/MocA family protein identified by match to protein family HMM PF01408; match to protein family HMM PF02894 A0R6Y7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6766137 6767504 . + 0 MSMEG_6718 MSMEG_6718 transporter, major facilitator family protein identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0R6Y8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6767501 6768358 . + 0 MSMEG_6719 MSMEG_6719 epoxide hydrolase identified by match to protein family HMM PF00561 A0R6Y9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6768359 6769222 . - 0 MSMEG_6720 MSMEG_6720 epoxide hydrolase identified by match to protein family HMM PF00561 A0R6Z0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6769236 6769355 . - 0 MSMEG_6721 MSMEG_6721 hypothetical protein identified by Glimmer2; putative A0R6Z1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6769511 6770410 . + 0 MSMEG_6722 MSMEG_6722 conserved hypothetical protein A0R6Z2 No unknown Rv2237 Rv2237 NC_008596.1 Mycobrowser_v3 CDS 6770504 6771022 . - 0 MSMEG_6723 MSMEG_6723 conserved hypothetical protein A0R6Z3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6771009 6771791 . - 0 MSMEG_6724 MSMEG_6724 ABC-type cobalt transport system identified by match to protein family HMM PF02361 A0R6Z4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6771788 6773263 . - 0 MSMEG_6725 MSMEG_6725 ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005 A0R6Z5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6774109 6775455 . + 0 MSMEG_6727 MSMEG_6727 amino acid permease-associated region identified by match to protein family HMM PF00324 A0R6Z7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6775459 6775947 . + 0 MSMEG_6728 MSMEG_6728 conserved hypothetical protein A0R6Z8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6776043 6776948 . + 0 MSMEG_6730 MSMEG_6730 putative oxidoreductase YdbC identified by match to protein family HMM PF00248 A0R6Z9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6776891 6777760 . - 0 MSMEG_6729 MSMEG_6729 DNA-binding protein A0R700 No unknown NC_008596.1 Mycobrowser_v3 CDS 6777839 6778417 . + 0 MSMEG_6731 MSMEG_6731 transcriptional regulatory protein identified by match to protein family HMM PF00440 A0R701 No unknown NC_008596.1 Mycobrowser_v3 CDS 6778536 6779126 . + 0 MSMEG_6732 MSMEG_6732 integral membrane protein A0R702 No unknown NC_008596.1 Mycobrowser_v3 CDS 6779127 6779912 . - 0 MSMEG_6733 MSMEG_6733 hydrolase, carbon-nitrogen family protein identified by match to protein family HMM PF00795 A0R703 No unknown NC_008596.1 Mycobrowser_v3 CDS 6779938 6781251 . - 0 MSMEG_6734 MSMEG_6734 dibenzothiophene desulfurization enzyme A A0R704 No unknown NC_008596.1 Mycobrowser_v3 CDS 6781284 6782720 . - 0 MSMEG_6735 MSMEG_6735 amino acid permease, putative identified by match to protein family HMM PF00324 A0R705 No unknown Rv1979c Rv1979c NC_008596.1 Mycobrowser_v3 CDS 4145143 4145472 . - 0 MSMEG_4071 MSMEG_4071 conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6782849 6783850 . - 0 MSMEG_6736 MSMEG_6736 LacI-family protein transcriptional regulator identified by match to protein family HMM PF00356 A0R706 No unknown NC_008596.1 Mycobrowser_v3 CDS 6784100 6785038 . + 0 MSMEG_6737 MSMEG_6737 putative membrane protein A0R707 No unknown Rv0622 Rv0622 NC_008596.1 Mycobrowser_v3 CDS 6785045 6785728 . - 0 MSMEG_6738 MSMEG_6738 probable transcriptional regulator YdhC identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0R708 No unknown NC_008596.1 Mycobrowser_v3 CDS 6785888 6786334 . + 0 MSMEG_6739 MSMEG_6739 hypothetical protein identified by Glimmer2; putative A0R709 No unknown NC_008596.1 Mycobrowser_v3 CDS 6786544 6787548 . + 0 MSMEG_6740 MSMEG_6740 1-aminocyclopropane-1-carboxylate deaminase identified by match to protein family HMM PF00291; match to protein family HMM TIGR01274 A0R710 No unknown NC_008596.1 Mycobrowser_v3 CDS 6820316 6820858 . + 0 MSMEG_6771 MSMEG_6771 conserved hypothetical protein A0R741 No unknown NC_008596.1 Mycobrowser_v3 CDS 6787549 6788229 . - 0 MSMEG_6741 MSMEG_6741 antar domain protein identified by match to protein family HMM PF03861 A0R711 No unknown NC_008596.1 Mycobrowser_v3 CDS 6788255 6788818 . - 0 MSMEG_6742 MSMEG_6742 conserved hypothetical protein identified by match to protein family HMM PF07336 A0R712 No unknown NC_008596.1 Mycobrowser_v3 CDS 6788941 6789396 . + 0 MSMEG_6743 MSMEG_6743 lactoylglutathione lyase identified by match to protein family HMM PF00903 A0R713 No unknown NC_008596.1 Mycobrowser_v3 CDS 6789407 6790261 . + 0 MSMEG_6744 MSMEG_6744 oxidoreductase FAD/NAD identified by match to protein family HMM PF01243 A0R714 No unknown NC_008596.1 Mycobrowser_v3 CDS 6790305 6791048 . + 0 MSMEG_6745 MSMEG_6745 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07702 A0R715 No unknown NC_008596.1 Mycobrowser_v3 CDS 5445359 5445898 . + 0 MSMEG_5367 MSMEG_5367 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6791052 6792122 . - 0 MSMEG_6746 MSMEG_6746 oxidoreductase, aldo/keto reductase family protein identified by match to protein family HMM PF00248 A0R716 No unknown NC_008596.1 Mycobrowser_v3 CDS 6792281 6793198 . + 0 MSMEG_6747 MSMEG_6747 oxidoreductase identified by match to protein family HMM PF00107 A0R717 No unknown NC_008596.1 Mycobrowser_v3 CDS 6793199 6794875 . - 0 MSMEG_6748 MSMEG_6748 ATPase component of ABC transporters with duplicated ATPase domains identified by match to protein family HMM PF00005 A0R718 No unknown NC_008596.1 Mycobrowser_v3 CDS 6794909 6795121 . - 0 MSMEG_6749 MSMEG_6749 conserved hypothetical protein A0R719 No unknown NC_008596.1 Mycobrowser_v3 CDS 6795153 6795962 . - 0 MSMEG_6750 MSMEG_6750 hypothetical protein identified by Glimmer2; putative A0R720 No unknown NC_008596.1 Mycobrowser_v3 CDS 6796078 6796293 . + 0 MSMEG_6751 MSMEG_6751 hypothetical protein identified by Glimmer2; putative A0R721 No unknown NC_008596.1 Mycobrowser_v3 CDS 4145792 4146399 . - 0 MSMEG_4073 MSMEG_4073 DNA-binding protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6796297 6797238 . - 0 MSMEG_6752 MSMEG_6752 endoglucanase A identified by match to protein family HMM PF01341 A0R722 No unknown Rv0062 Rv0062 NC_008596.1 Mycobrowser_v3 CDS 6797368 6798090 . + 0 MSMEG_6753 MSMEG_6753 oxidoreductase, short chain dehydrogenase/reductase family protein identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF07993 A0R723 No unknown NC_008596.1 Mycobrowser_v3 CDS 6798433 6799461 . + 0 MSMEG_6754 MSMEG_6754 MaoC like domain protein identified by match to protein family HMM PF01575 A0R724 No unknown NC_008596.1 Mycobrowser_v3 CDS 6799518 6800441 . + 0 MSMEG_6755 MSMEG_6755 isoflavone reductase identified by match to protein family HMM PF05368 A0R725 No unknown NC_008596.1 Mycobrowser_v3 CDS 6800466 6801983 . - 0 MSMEG_6756 glpK glycerol kinase identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311 A0R726 No unknown NC_008596.1 Mycobrowser_v3 CDS 6801980 6802741 . - 0 MSMEG_6757 MSMEG_6757 glycerol operon regulatory protein identified by match to protein family HMM PF01614 A0R727 No unknown Rv1773c Rv1773c NC_008596.1 Mycobrowser_v3 CDS 6802924 6803739 . + 0 MSMEG_6758 MSMEG_6758 transport integral membrane protein identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861 A0R728 No unknown NC_008596.1 Mycobrowser_v3 CDS 6803763 6805280 . + 0 MSMEG_6759 glpK glycerol kinase identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311 A0R729 No unknown NC_008596.1 Mycobrowser_v3 CDS 6805277 6806983 . + 0 MSMEG_6761 MSMEG_6761 glycerol-3-phosphate dehydrogenase 2 identified by match to protein family HMM PF01266; match to protein family HMM PF01494 A0R730 No unknown NC_008596.1 Mycobrowser_v3 CDS 6807853 6808677 . - 0 MSMEG_6763 MSMEG_6763 oxidoreductase identified by match to protein family HMM PF00561 A0R733 No unknown Rv0077c Rv0077c NC_008596.1 Mycobrowser_v3 CDS 6808750 6809331 . + 0 MSMEG_6764 MSMEG_6764 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R734 No unknown NC_008596.1 Mycobrowser_v3 CDS 6809341 6810183 . - 0 MSMEG_6765 MSMEG_6765 ABC-2 type transporter superfamily protein identified by match to protein family HMM PF01061 A0R735 No unknown NC_008596.1 Mycobrowser_v3 CDS 6810183 6811019 . - 0 MSMEG_6766 MSMEG_6766 ABC transporter, ATP-binding protein, NodI family protein identified by match to protein family HMM PF00005 A0R736 No unknown NC_008596.1 Mycobrowser_v3 CDS 6811016 6816496 . - 0 MSMEG_6767 MSMEG_6767 mycocerosic acid synthase identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801 A0R737 No unknown NC_008596.1 Mycobrowser_v3 CDS 6816577 6818328 . - 0 MSMEG_6768 MSMEG_6768 halogenase identified by match to protein family HMM PF01266; match to protein family HMM PF04820 A0R738 No unknown NC_008596.1 Mycobrowser_v3 CDS 6818359 6819639 . - 0 MSMEG_6769 MSMEG_6769 transporter, monovalent cation:proton antiporter-2 (CPA2) family protein identified by match to protein family HMM PF00999 A0R739 No unknown NC_008596.1 Mycobrowser_v3 CDS 6819891 6820289 . + 0 MSMEG_6770 MSMEG_6770 conserved hypothetical protein A0R740 No unknown NC_008596.1 Mycobrowser_v3 CDS 6820932 6821960 . + 0 MSMEG_6772 MSMEG_6772 homoserine O-acetyltransferase identified by match to protein family HMM PF00561 A0R742 No unknown NC_008596.1 Mycobrowser_v3 CDS 6822091 6823278 . + 0 MSMEG_6773 MSMEG_6773 CaiB/BaiF family protein identified by match to protein family HMM PF02515 A0R743 No unknown NC_008596.1 Mycobrowser_v3 CDS 6823288 6824070 . + 0 MSMEG_6774 MSMEG_6774 enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R744 No unknown NC_008596.1 Mycobrowser_v3 CDS 6824092 6825447 . + 0 MSMEG_6775 MSMEG_6775 major facilitator superfamily protein transporter identified by match to protein family HMM PF00083; match to protein family HMM PF07690 A0R745 No unknown NC_008596.1 Mycobrowser_v3 CDS 5459930 5462753 . + 0 MSMEG_5382 MSMEG_5382 hypothetical protein; this gene contains a frame shift which is not the result of sequencing error; identified by Glimmer2 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6825514 6826359 . + 0 MSMEG_6776 MSMEG_6776 transcriptional regulator, LysR family protein identified by similarity to SP:P32064; match to protein family HMM PF00126; match to protein family HMM PF03466 A0R746 No unknown NC_008596.1 Mycobrowser_v3 CDS 6826399 6827178 . + 0 MSMEG_6777 MSMEG_6777 probable enoyl-CoA hydratase identified by match to protein family HMM PF00378 A0R747 No unknown NC_008596.1 Mycobrowser_v3 CDS 6827676 6828323 . - 0 MSMEG_6779 MSMEG_6779 conserved hypothetical protein, putative identified by match to protein family HMM TIGR03083 A0R749 No unknown NC_008596.1 Mycobrowser_v3 CDS 6828361 6829233 . + 0 MSMEG_6780 MSMEG_6780 phenazine biosynthesis protein PhzF identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654 A0R750 No unknown NC_008596.1 Mycobrowser_v3 CDS 6829246 6830718 . - 0 MSMEG_6781 MSMEG_6781 hypothetical protein identified by Glimmer2; putative A0R751 No unknown NC_008596.1 Mycobrowser_v3 CDS 6830819 6831088 . + 0 MSMEG_6782 MSMEG_6782 hypothetical protein identified by Glimmer2; putative A0R752 No unknown NC_008596.1 Mycobrowser_v3 CDS 6952349 6953122 . + 0 MSMEG_6907 MSMEG_6907 MmcI protein A0R7G8 No unknown Rv0044c Rv0044c NC_008596.1 Mycobrowser_v3 CDS 6831167 6832159 . - 0 MSMEG_6783 MSMEG_6783 integral membrane protein A0R753 No unknown NC_008596.1 Mycobrowser_v3 CDS 6832219 6833286 . - 0 MSMEG_6784 MSMEG_6784 beta-lactamase identified by match to protein family HMM PF00144 A0R754 No unknown NC_008596.1 Mycobrowser_v3 CDS 6833391 6833990 . + 0 MSMEG_6786 MSMEG_6786 conserved hypothetical protein A0R755 No unknown NC_008596.1 Mycobrowser_v3 CDS 6833969 6834760 . - 0 MSMEG_6785 tpiA triosephosphate isomerase identified by match to protein family HMM PF00121 A0R756 No unknown NC_008596.1 Mycobrowser_v3 CDS 6834753 6835211 . - 0 MSMEG_6787 MSMEG_6787 ribose 5-phosphate isomerase identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR02133 A0R757 No unknown NC_008596.1 Mycobrowser_v3 CDS 6835256 6836971 . - 0 MSMEG_6788 MSMEG_6788 dihydroxyacetone kinase identified by match to protein family HMM PF02733; match to protein family HMM PF02734 A0R758 No unknown NC_008596.1 Mycobrowser_v3 CDS 6837064 6837840 . - 0 MSMEG_6789 MSMEG_6789 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0R759 No unknown NC_008596.1 Mycobrowser_v3 CDS 6838029 6838949 . + 0 MSMEG_6790 MSMEG_6790 AP endonuclease, family protein 2 identified by match to protein family HMM PF01261 A0R760 No unknown NC_008596.1 Mycobrowser_v3 CDS 5497775 5498948 . + 0 MSMEG_5419 MSMEG_5419 lipoprotein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF04302 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6838975 6839937 . + 0 MSMEG_6791 MSMEG_6791 3-hydroxybutyryl-CoA dehydrogenase identified by match to protein family HMM PF00725; match to protein family HMM PF01210; match to protein family HMM PF02737; match to protein family HMM PF03446 A0R761 No unknown Rv1715 Rv1715 NC_008596.1 Mycobrowser_v3 CDS 6840005 6841405 . + 0 MSMEG_6792 MSMEG_6792 inner membrane permease YgbN identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM TIGR00791 A0R762 No unknown NC_008596.1 Mycobrowser_v3 CDS 1820885 1821124 . - 0 MSMEG_1727 MSMEG_1727 This gene is disrupted by an ISMsm1 element.; ISMsm5, transposase, interruption-C; identified by similarity to OMNI:NTL01RS0103 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6841426 6842814 . - 0 MSMEG_6793 MSMEG_6793 hypothetical protein identified by Glimmer2; putative A0R763 No unknown NC_008596.1 Mycobrowser_v3 CDS 6842901 6843767 . - 0 MSMEG_6794 MSMEG_6794 DNA-binding protein identified by match to protein family HMM PF01381 A0R764 No unknown NC_008596.1 Mycobrowser_v3 CDS 6843947 6844789 . + 0 MSMEG_6795 MSMEG_6795 enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 A0R765 No unknown NC_008596.1 Mycobrowser_v3 CDS 6844782 6845168 . + 0 MSMEG_6796 MSMEG_6796 hypothetical protein identified by Glimmer2; putative A0R766 No unknown NC_008596.1 Mycobrowser_v3 CDS 6846555 6847553 . - 0 MSMEG_6798 rbsR ribose operon repressor identified by similarity to SP:P25551; match to protein family HMM PF00356; match to protein family HMM PF00532 A0R768 No unknown NC_008596.1 Mycobrowser_v3 CDS 6847550 6848200 . - 0 MSMEG_6800 MSMEG_6800 phosphoribulokinase/uridine kinase A0R769 No unknown NC_008596.1 Mycobrowser_v3 CDS 6848197 6849126 . - 0 MSMEG_6801 MSMEG_6801 kinase, pfkB family protein identified by match to protein family HMM PF00294 A0R770 No unknown NC_008596.1 Mycobrowser_v3 CDS 6849104 6849895 . - 0 MSMEG_6802 MSMEG_6802 ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 A0R771 No unknown NC_008596.1 Mycobrowser_v3 CDS 6849892 6850911 . - 0 MSMEG_6803 MSMEG_6803 ribose transport system permease protein RbsC identified by match to protein family HMM PF02653 A0R772 No unknown NC_008596.1 Mycobrowser_v3 CDS 6850913 6851911 . - 0 MSMEG_6804 MSMEG_6804 sugar ABC transporter substrate-binding protein identified by match to protein family HMM PF00532 A0R773 No unknown NC_008596.1 Mycobrowser_v3 CDS 6852036 6853556 . + 0 MSMEG_6805 MSMEG_6805 beta-lactamase identified by match to protein family HMM PF00144 A0R774 No unknown NC_008596.1 Mycobrowser_v3 CDS 6912063 6912752 . - 0 MSMEG_6864 MSMEG_6864 putative transcription regulator A0R7D0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6853636 6856158 . - 0 MSMEG_6806 uvrA excinuclease ABC, A subunit identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630 A0R775 No unknown NC_008596.1 Mycobrowser_v3 CDS 6856188 6856793 . - 0 MSMEG_6807 MSMEG_6807 transcriptional regulator, TetR family protein identified by match to protein family HMM PF00440 A0R776 No unknown NC_008596.1 Mycobrowser_v3 CDS 6856899 6858059 . + 0 MSMEG_6808 MSMEG_6808 hypothetical protein identified by Glimmer2; putative A0R777 No unknown NC_008596.1 Mycobrowser_v3 CDS 6858052 6858855 . + 0 MSMEG_6809 cbbQ CbbQ protein identified by match to protein family HMM PF07728 A0R778 No unknown NC_008596.1 Mycobrowser_v3 CDS 6860658 6861881 . - 0 MSMEG_6811 MSMEG_6811 conserved hypothetical protein A0R779 No unknown NC_008596.1 Mycobrowser_v3 CDS 6863010 6863963 . - 0 MSMEG_6813 MSMEG_6813 amidohydrolase 2 identified by match to protein family HMM PF04909 A0R780 No unknown NC_008596.1 Mycobrowser_v3 CDS 6864069 6864503 . + 0 MSMEG_6814 MSMEG_6814 helix-turn-helix, Fis-type identified by match to protein family HMM PF01047 A0R781 No unknown NC_008596.1 Mycobrowser_v3 CDS 6864557 6865342 . + 0 MSMEG_6815 MSMEG_6815 secreted protein identified by match to protein family HMM TIGR01409 A0R782 No unknown NC_008596.1 Mycobrowser_v3 CDS 6865435 6867597 . + 0 MSMEG_6816 MSMEG_6816 molybdopterin oxidoreductase identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879 A0R783 No unknown NC_008596.1 Mycobrowser_v3 CDS 6867601 6868491 . - 0 MSMEG_6817 MSMEG_6817 RNA polymerase sigma factor, sigma-70 family protein identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0R784 No unknown NC_008596.1 Mycobrowser_v3 CDS 6868472 6869674 . - 0 MSMEG_6818 MSMEG_6818 dehydrogenase identified by match to protein family HMM PF00070; match to protein family HMM PF07992 A0R785 No unknown NC_008596.1 Mycobrowser_v3 CDS 6870741 6871520 . + 0 MSMEG_6820 surE acid phosphatase SurE identified by match to protein family HMM PF01975; match to protein family HMM TIGR00087 A0R786 No unknown NC_008596.1 Mycobrowser_v3 CDS 6871529 6872626 . - 0 MSMEG_6821 MSMEG_6821 NLP/P60 family protein A0R787 No unknown NC_008596.1 Mycobrowser_v3 CDS 5595683 5596530 . - 0 MSMEG_5510 MSMEG_5510 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6872926 6873837 . + 0 MSMEG_6822 MSMEG_6822 beta-lactamase identified by match to protein family HMM PF00144 A0R788 No unknown NC_008596.1 Mycobrowser_v3 CDS 6873845 6874579 . - 0 MSMEG_6823 MSMEG_6823 short-chain dehydrogenase/reductase SDR identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R789 No unknown NC_008596.1 Mycobrowser_v3 CDS 6874761 6875474 . - 0 MSMEG_6824 MSMEG_6824 MarR-family protein regulatory protein identified by match to protein family HMM PF01047 A0R790 No unknown NC_008596.1 Mycobrowser_v3 CDS 1822434 1823294 . - 0 MSMEG_1729 MSMEG_1729 This gene is disrupted by an ISMsm1 element.; ISMsm5, transposase, interruption-N; identified by similarity to GB:CAD18826.1 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6875373 6876185 . + 0 MSMEG_6825 MSMEG_6825 caax amino protease family protein, putative identified by match to protein family HMM PF02517 A0R791 No unknown NC_008596.1 Mycobrowser_v3 CDS 6876287 6877969 . + 0 MSMEG_6826 MSMEG_6826 L-lactate permease identified by match to protein family HMM PF02652; match to protein family HMM TIGR00795 A0R792 No unknown NC_008596.1 Mycobrowser_v3 CDS 6877979 6878119 . - 0 MSMEG_6827 MSMEG_6827 hypothetical protein identified by Glimmer2; putative A0R793 No unknown NC_008596.1 Mycobrowser_v3 CDS 6891408 6892730 . + 0 MSMEG_6842 MSMEG_6842 2,2-dialkylglycine decarboxylase identified by match to protein family HMM PF00202 A0R7A8 No unknown NC_008596.1 Mycobrowser_v3 CDS 4153904 4154781 . - 0 MSMEG_4080 MSMEG_4080 fmnh2-utilizing oxygenase; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6878097 6880826 . - 0 MSMEG_6828 MSMEG_6828 transcriptional regulator identified by match to protein family HMM PF00196 A0R794 No unknown NC_008596.1 Mycobrowser_v3 CDS 6880885 6881337 . + 0 MSMEG_6829 MSMEG_6829 transcriptional regulatory protein identified by match to protein family HMM PF01638 A0R795 No unknown NC_008596.1 Mycobrowser_v3 CDS 6881399 6882127 . + 0 MSMEG_6830 MSMEG_6830 conserved hypothetical protein A0R796 No unknown Rv1742 Rv1742 NC_008596.1 Mycobrowser_v3 CDS 6882131 6882982 . - 0 MSMEG_6831 MSMEG_6831 hydrolase, alpha/beta hydrolase fold family protein identified by match to protein family HMM PF00561 A0R797 No unknown NC_008596.1 Mycobrowser_v3 CDS 6883001 6883624 . - 0 MSMEG_6832 MSMEG_6832 conserved hypothetical protein identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03086 A0R798 No unknown Rv3773c Rv3773c NC_008596.1 Mycobrowser_v3 CDS 6883673 6884752 . + 0 MSMEG_6833 MSMEG_6833 alcohol dehydrogenase identified by match to protein family HMM PF00107 A0R799 No unknown NC_008596.1 Mycobrowser_v3 CDS 5639461 5640474 . + 0 MSMEG_5550 MSMEG_5550 protein-glutamate methylesterase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01339 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6884787 6885815 . + 0 MSMEG_6834 MSMEG_6834 alcohol dehydrogenase identified by match to protein family HMM PF00107 A0R7A0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6885835 6887229 . - 0 MSMEG_6835 MSMEG_6835 Fatty acid desaturase identified by match to protein family HMM PF00487 A0R7A1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6887256 6887666 . - 0 MSMEG_6836 MSMEG_6836 putative oxidoreductase identified by match to protein family HMM PF00111 A0R7A2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6887818 6888333 . + 0 MSMEG_6838 MSMEG_6838 putative esterase A0R7A3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6888294 6889229 . - 0 MSMEG_6837 MSMEG_6837 haloalkane dehalogenase identified by match to protein family HMM PF00561 Q938B4 No unknown Rv2579 Rv2579 NC_008596.1 Mycobrowser_v3 CDS 6902305 6902853 . - 0 MSMEG_6853 MSMEG_6853 3-isopropylmalate dehydratase small subunit identified by match to protein family HMM PF00694; match to protein family HMM TIGR02087 Q938C8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6889400 6890398 . + 0 MSMEG_6839 MSMEG_6839 transcriptional regulator, AraC family protein identified by match to protein family HMM PF00165; match to protein family HMM PF01965 A0R7A5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6918823 6919647 . + 0 MSMEG_6870 MSMEG_6870 creatinine amidohydrolase identified by match to protein family HMM PF02633 A0R7D5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6890416 6891297 . - 0 MSMEG_6840 MSMEG_6840 LysR-family protein transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R7A6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6891315 6891446 . - 0 MSMEG_6841 MSMEG_6841 hypothetical protein identified by Glimmer2; putative A0R7A7 No unknown NC_008596.1 Mycobrowser_v3 CDS 4213877 4215222 . + 0 MSMEG_4134 MSMEG_4134 TnpC protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6892736 6893557 . - 0 MSMEG_6843 MSMEG_6843 NAD-dependent epimerase/dehydratase identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993 A0R7A9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6893571 6894623 . - 0 MSMEG_6844 MSMEG_6844 trap-t family protein transporter, dctp identified by match to protein family HMM PF03480; match to protein family HMM TIGR00787; match to protein family HMM TIGR01409 A0R7B0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6894636 6895931 . - 0 MSMEG_6845 MSMEG_6845 trap dicarboxylate transporter, dctm subunit identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786 A0R7B1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6895944 6896453 . - 0 MSMEG_6846 MSMEG_6846 putative C4 decarboxylate transport protein identified by match to protein family HMM PF04290 A0R7B2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6896461 6897615 . - 0 MSMEG_6847 MSMEG_6847 conserved hypothetical protein A0R7B3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6911105 6911872 . + 0 MSMEG_6863 MSMEG_6863 class II aldolase/adducin domain protein identified by match to protein family HMM PF00596 A0R7C9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6897798 6899045 . - 0 MSMEG_6848 MSMEG_6848 putative oxidoreductase identified by match to protein family HMM PF01243 A0R7B4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6899091 6900023 . - 0 MSMEG_6849 MSMEG_6849 LysR-family protein transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R7B5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6900106 6900822 . + 0 MSMEG_6850 MSMEG_6850 alpha/beta hydrolase A0R7B6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6900861 6901784 . + 0 MSMEG_6852 MSMEG_6852 putative carboxylesterase/lipase identified by match to protein family HMM PF07859 A0R7B7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6901769 6902308 . - 0 MSMEG_6851 MSMEG_6851 phosphatidylethanolamine-binding protein identified by match to protein family HMM PF01161 A0R7B8 No unknown Rv1910c,Rv1911c Rv1910c,Rv1911c NC_008596.1 Mycobrowser_v3 CDS 1891196 1892388 . + 0 MSMEG_1816 MSMEG_1816 hypothetical protein; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error; identified by Glimmer2 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6977934 6978266 . + 0 MSMEG_6934 trx thioredoxin identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068 A0R7J0 No unknown Rv3914 Rv3914 NC_008596.1 Mycobrowser_v3 CDS 6902850 6904118 . - 0 MSMEG_6854 MSMEG_6854 3-isopropylmalate dehydratase large subunit identified by match to protein family HMM PF00330; match to protein family HMM TIGR01343 Q938C9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6904120 6905010 . - 0 MSMEG_6855 MSMEG_6855 carboxyvinyl-carboxyphosphonate phosphorylmutase A0R7C1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6905010 6906443 . - 0 MSMEG_6856 MSMEG_6856 MmgE/PrpD family protein identified by match to protein family HMM PF03972 A0R7C2 No unknown NC_008596.1 Mycobrowser_v3 CDS 4218450 4219683 . + 0 MSMEG_4139 MSMEG_4139 major facilitator superfamily MFS_1; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6906505 6907275 . + 0 MSMEG_6857 MSMEG_6857 putative transcription regulator identified by match to protein family HMM PF01614 A0R7C3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6907277 6908395 . - 0 MSMEG_6858 MSMEG_6858 epoxide hydrolase 1 identified by match to protein family HMM PF00561; match to protein family HMM PF06441 A0R7C4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6908449 6909201 . - 0 MSMEG_6859 MSMEG_6859 oxidoreductase identified by match to protein family HMM PF00106; match to protein family HMM PF01370 A0R7C5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6909291 6909740 . - 0 MSMEG_6860 MSMEG_6860 conserved hypothetical protein A0R7C6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6909812 6910366 . - 0 MSMEG_6861 MSMEG_6861 cupin domain protein identified by match to protein family HMM PF07883 A0R7C7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6910524 6911108 . + 0 MSMEG_6862 MSMEG_6862 putative transcription regulator identified by match to protein family HMM PF00440 A0R7C8 No unknown NC_008596.1 Mycobrowser_v3 CDS 5644287 5645176 . + 0 MSMEG_5555 MSMEG_5555 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6912890 6914365 . + 0 MSMEG_6865 MSMEG_6865 ABC transporter solute binding lipoprotein identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409 A0R7D1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6914358 6915356 . + 0 MSMEG_6866 MSMEG_6866 dipeptide transport system permease protein DppB identified by match to protein family HMM PF00528 A0R7D2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6915356 6916180 . + 0 MSMEG_6867 MSMEG_6867 oligopeptide ABC transporter integral membrane protein identified by match to protein family HMM PF00528 A0R7D3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6917828 6918790 . - 0 MSMEG_6869 MSMEG_6869 regulatory protein identified by match to protein family HMM PF00480 A0R7D4 No unknown NC_008596.1 Mycobrowser_v3 tRNA 10293 10368 . + 0 MSMEG_0010 MSMEG_0010 tRNA-Ala No stable RNAs NC_008596.1 Mycobrowser_v3 tRNA 1228393 1228478 . + 0 MSMEG_1166 MSMEG_1166 tRNA-Tyr No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 6919644 6920771 . + 0 MSMEG_6871 MSMEG_6871 isomerase identified by match to protein family HMM PF01188; match to protein family HMM PF02746 A0R7D6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6920768 6921817 . + 0 MSMEG_6872 MSMEG_6872 beta-lactamase identified by match to protein family HMM PF00144 A0R7D7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6937052 6937345 . + 0 MSMEG_6890 MSMEG_6890 antibiotic biosynthesis monooxygenase domain protein identified by match to protein family HMM PF03992 A0R7F3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6922554 6924056 . - 0 MSMEG_6874 MSMEG_6874 aldehyde dehydrogenase identified by match to protein family HMM PF00171 A0R7D8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6924099 6925229 . - 0 MSMEG_6875 MSMEG_6875 endoribonuclease L-PSP family protein identified by match to protein family HMM PF01042 A0R7D9 No unknown NC_008596.1 Mycobrowser_v3 CDS 6925321 6926043 . - 0 MSMEG_6876 MSMEG_6876 branched chain amino acid transport ATP-binding protein identified by match to protein family HMM PF00005 A0R7E0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6926040 6926819 . - 0 MSMEG_6877 MSMEG_6877 branched-chain amino acid transport system ATP-binding protein identified by match to protein family HMM PF00005 A0R7E1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6926816 6927790 . - 0 MSMEG_6878 MSMEG_6878 inner-membrane translocator identified by match to protein family HMM PF02653 A0R7E2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6927790 6928701 . - 0 MSMEG_6879 MSMEG_6879 integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD identified by match to protein family HMM PF02653 A0R7E3 No unknown NC_008596.1 Mycobrowser_v3 CDS 6928729 6930018 . - 0 MSMEG_6880 MSMEG_6880 hydrophobic amino acid ABC transporter, putative identified by match to protein family HMM PF01094 A0R7E4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6930093 6930722 . - 0 MSMEG_6881 MSMEG_6881 transcriptional regulator, GntR family protein identified by match to protein family HMM PF00392; match to protein family HMM PF07729 A0R7E5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6931229 6932188 . - 0 MSMEG_6882 MSMEG_6882 LysR-family protein transcriptional regulator identified by match to protein family HMM PF00126; match to protein family HMM PF03466 A0R7E6 No unknown NC_008596.1 Mycobrowser_v3 CDS 6932415 6932957 . + 0 MSMEG_6884 MSMEG_6884 NADP oxidoreductase, coenzyme f420-dependent:6-phosphogluconate dehydrogenase, nad-binding, putative identified by match to protein family HMM PF03807 A0R7E7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6933023 6933847 . + 0 MSMEG_6885 MSMEG_6885 MmcI protein A0R7E8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6934366 6935613 . + 0 MSMEG_6887 MSMEG_6887 amidohydrolase family protein identified by match to protein family HMM PF01979; match to protein family HMM PF07969 A0R7F0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6935806 6936627 . - 0 MSMEG_6888 MSMEG_6888 transposase subunit identified by match to protein family HMM PF00665 A0R7F1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6936660 6936968 . - 0 MSMEG_6889 MSMEG_6889 transposase identified by match to protein family HMM PF01527 A0R7F2 No unknown NC_008596.1 Mycobrowser_v3 CDS 6937984 6941058 . - 0 MSMEG_6892 MSMEG_6892 replicative DNA helicase identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR01443; match to protein family HMM TIGR01445 A0R7F4 No unknown Rv0058 Rv0058 NC_008596.1 Mycobrowser_v3 CDS 6941041 6941307 . + 0 MSMEG_6893 MSMEG_6893 hypothetical protein identified by Glimmer2; putative A0R7F5 No unknown NC_008596.1 Mycobrowser_v3 CDS 6941588 6942043 . - 0 MSMEG_6894 rplI ribosomal protein L9 identified by match to protein family HMM PF01281; match to protein family HMM PF03948; match to protein family HMM TIGR00158 A0R7F6 No unknown Rv0056 Rv0056 NC_008596.1 Mycobrowser_v3 CDS 6942062 6942316 . - 0 MSMEG_6895 rpsR ribosomal protein S18 identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165 A0R7F7 No unknown Rv0055 Rv0055 NC_008596.1 Mycobrowser_v3 CDS 6942354 6942851 . - 0 MSMEG_6896 MSMEG_6896 single-stranded DNA-binding protein identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621 Q9AFI5 No unknown Rv0054 Rv0054 NC_008596.1 Mycobrowser_v3 CDS 6942924 6943196 . - 0 MSMEG_6897 rpsF ribosomal protein S6 identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166 A0R7F9 No unknown Rv0053 Rv0053 NC_008596.1 Mycobrowser_v3 CDS 6943613 6944188 . - 0 MSMEG_6898 MSMEG_6898 hypothetical protein identified by Glimmer2; putative A0R7G0 No unknown NC_008596.1 Mycobrowser_v3 CDS 5736254 5736935 . + 0 MSMEG_5647 MSMEG_5647 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6943954 6945618 . - 0 MSMEG_6899 MSMEG_6899 conserved hypothetical protein A0R7G1 No unknown Rv0051 Rv0051 NC_008596.1 Mycobrowser_v3 CDS 6945615 6947972 . - 0 MSMEG_6900 MSMEG_6900 penicillin-binding protein 1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912 A0R7G2 No unknown Rv0050 Rv0050 NC_008596.1 Mycobrowser_v3 CDS 6948091 6948579 . - 0 MSMEG_6901 MSMEG_6901 conserved hypothetical protein A0R7G3 No unknown Rv0049 Rv0049 NC_008596.1 Mycobrowser_v3 CDS 6948592 6949461 . + 0 MSMEG_6902 MSMEG_6902 putative membrane protein identified by match to protein family HMM PF08044 A0R7G4 No unknown Rv0048c Rv0048c NC_008596.1 Mycobrowser_v3 CDS 6949596 6950150 . + 0 MSMEG_6903 MSMEG_6903 transcriptional regulator, PadR family protein identified by match to protein family HMM PF03551 A0R7G5 No unknown Rv0047c Rv0047c NC_008596.1 Mycobrowser_v3 CDS 6950228 6951319 . + 0 MSMEG_6904 MSMEG_6904 myo-inositol-1-phosphate synthase identified by match to protein family HMM PF01658; match to protein family HMM PF07994 A0R7G6 No unknown Rv0046c Rv0046c NC_008596.1 Mycobrowser_v3 CDS 6951391 6952305 . + 0 MSMEG_6906 MSMEG_6906 putative hydrolase identified by match to protein family HMM PF00561 A0R7G7 No unknown Rv0045c Rv0045c NC_008596.1 Mycobrowser_v3 CDS 4255613 4256982 . - 0 MSMEG_4177 MSMEG_4177 mercuric reductase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6953210 6953875 . + 0 MSMEG_6908 MSMEG_6908 putative HTH-type transcriptional regulator identified by match to protein family HMM PF00392 A0R7G9 No unknown Rv0043c Rv0043c NC_008596.1 Mycobrowser_v3 CDS 6953922 6955694 . + 0 MSMEG_6909 MSMEG_6909 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family protein identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726 A0R7H0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6955694 6956431 . + 0 MSMEG_6911 MSMEG_6911 ABC transporter, ATP-binding protein GluA identified by match to protein family HMM PF00005 A0R7H1 No unknown NC_008596.1 Mycobrowser_v3 CDS 6956496 6956996 . + 0 MSMEG_6913 MSMEG_6913 putative transcriptional regulatory protein identified by match to protein family HMM PF01047 A0R7H2 No unknown Rv0042c Rv0042c NC_008596.1 Mycobrowser_v3 CDS 6958400 6959065 . + 0 MSMEG_6916 MSMEG_6916 short chain dehydrogenase identified by match to protein family HMM PF00106 A0R7H4 No unknown NC_008596.1 Mycobrowser_v3 CDS 6959072 6961933 . - 0 MSMEG_6917 leuS leucyl-tRNA synthetase identified by match to protein family HMM TIGR00396 A0R7H5 No unknown Rv0041 Rv0041 NC_008596.1 Mycobrowser_v3 CDS 6962147 6963091 . + 0 MSMEG_6919 MSMEG_6919 proline-rich 28 kDa antigen A0R7H6 No unknown Rv0040c Rv0040c NC_008596.1 Mycobrowser_v3 CDS 6963161 6963529 . + 0 MSMEG_6920 MSMEG_6920 hypothetical protein identified by Glimmer2; putative A0R7H7 No unknown Rv0039c Rv0039c NC_008596.1 Mycobrowser_v3 CDS 6963530 6964135 . - 0 MSMEG_6921 MSMEG_6921 conserved hypothetical protein identified by match to protein family HMM PF02622 A0R7H8 No unknown Rv0038 Rv0038 NC_008596.1 Mycobrowser_v3 CDS 6964262 6965557 . + 0 MSMEG_6922 MSMEG_6922 transporter, major facilitator family protein identified by match to protein family HMM PF07690 A0R7H9 No unknown Rv0037c Rv0037c NC_008596.1 Mycobrowser_v3 CDS 6965572 6966345 . + 0 MSMEG_6923 MSMEG_6923 conserved hypothetical protein identified by match to protein family HMM TIGR03083; match to protein family HMM TIGR03084 A0R7I0 No unknown Rv0036c Rv0036c NC_008596.1 Mycobrowser_v3 CDS 6966439 6966936 . - 0 MSMEG_6925 MSMEG_6925 conserved hypothetical protein A0R7I1 No unknown Rv3906c Rv3906c NC_008596.1 Mycobrowser_v3 CDS 6982721 6983428 . - 0 MSMEG_6940 gidB methyltransferase GidB identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138 A0R7J5 No unknown Rv3919c Rv3919c NC_008596.1 Mycobrowser_v3 CDS 6966955 6968397 . - 0 MSMEG_6926 MSMEG_6926 tRNA adenylyltransferase identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR02692 A0R7I2 No unknown Rv3907c Rv3907c NC_008596.1 Mycobrowser_v3 CDS 6969396 6971798 . + 0 MSMEG_6928 MSMEG_6928 conserved hypothetical protein A0R7I4 No unknown Rv3909 Rv3909 NC_008596.1 Mycobrowser_v3 CDS 6971795 6975445 . + 0 MSMEG_6929 MSMEG_6929 integral membrane protein MviN, putative identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695 A0R7I5 No unknown Rv3910 Rv3910 NC_008596.1 Mycobrowser_v3 CDS 5855822 5856710 . - 0 MSMEG_5783 MSMEG_5783 acetyltransferase, GNAT family; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00583 A4ZHT6 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6975546 6976172 . + 0 MSMEG_6931 MSMEG_6931 RNA polymerase sigma-70 factor identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937 A0R7I6 No unknown Rv3911 Rv3911 NC_008596.1 Mycobrowser_v3 CDS 6976060 6976977 . - 0 MSMEG_6930 MSMEG_6930 hypothetical protein identified by Glimmer2; putative A0R7I7 No unknown NC_008596.1 Mycobrowser_v3 CDS 6976123 6976860 . + 0 MSMEG_6932 MSMEG_6932 conserved hypothetical protein A0R7I8 No unknown Rv3912 Rv3912 NC_008596.1 Mycobrowser_v3 CDS 6976965 6977900 . + 0 MSMEG_6933 trxB thioredoxin-disulfide reductase identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292 A0R7I9 No unknown Rv3913 Rv3913 NC_008596.1 Mycobrowser_v3 tRNA 1435983 1436055 . + 0 MSMEG_1337 MSMEG_1337 tRNA-Thr No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 6978405 6979595 . + 0 MSMEG_6935 MSMEG_6935 N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01471; match to protein family HMM PF01520 A0R7J1 No unknown Rv3915 Rv3915 NC_008596.1 Mycobrowser_v3 CDS 6979641 6980393 . - 0 MSMEG_6936 MSMEG_6936 conserved hypothetical protein A0R7J2 No unknown Rv3916c Rv3916c NC_008596.1 Mycobrowser_v3 CDS 6980632 6981687 . - 0 MSMEG_6938 MSMEG_6938 ParB-like partition proteins identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180 A0R7J3 No unknown Rv3917c Rv3917c NC_008596.1 Mycobrowser_v3 CDS 6981747 6982718 . - 0 MSMEG_6939 MSMEG_6939 Soj family protein identified by match to protein family HMM PF01656 A0R7J4 No unknown Rv3918c Rv3918c NC_008596.1 Mycobrowser_v3 CDS 6983492 6984043 . - 0 MSMEG_6941 MSMEG_6941 R3H domain-containing protein identified by match to protein family HMM PF01424 A0R7J6 No unknown Rv3920c Rv3920c NC_008596.1 Mycobrowser_v3 CDS 6984079 6985182 . - 0 MSMEG_6942 MSMEG_6942 membrane protein OxaA identified by match to protein family HMM PF02096 A0R7J7 No unknown Rv3921c Rv3921c NC_008596.1 Mycobrowser_v3 CDS 6985175 6985522 . - 0 MSMEG_6944 MSMEG_6944 conserved hypothetical protein, putative identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278 A0R7J8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6985519 6985890 . - 0 MSMEG_6945 rnpA ribonuclease P protein component identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188 A0R7J9 No unknown Rv3923c Rv3923c NC_008596.1 Mycobrowser_v3 CDS 6985943 6986086 . - 0 MSMEG_6946 rpmH ribosomal protein L34 identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030 A0R7K0 No unknown NC_008596.1 Mycobrowser_v3 CDS 6986600 6988114 . + 0 MSMEG_6947 dnaA chromosomal replication initiator protein DnaA identified by match to protein family HMM PF00308; match to protein family HMM TIGR00362 A0R7K1 No unknown Rv0001 Rv0001 NC_008596.1 Mycobrowser_v3 CDS 5899518 5900089 . - 0 MSMEG_5833 MSMEG_5833 conserved hypothetical protein; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6071277 6072254 . - 0 MSMEG_6007 MSMEG_6007 cation diffusion facilitator family transporter; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 425760 428642 . + 0 MSMEG_0381 mmpl4a Mmp14a protein identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833 A0QPF6 No unknown NC_008596.1 Mycobrowser_v3 CDS 3794904 3796970 . - 0 MSMEG_3729 katG catalase/peroxidase HPI identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198 A0QYP1 No unknown NC_008596.1 Mycobrowser_v3 tRNA 1436094 1436167 . + 0 MSMEG_1338 MSMEG_1338 tRNA-Met No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 1671564 1673186 . + 0 MSMEG_1583 groL2 chaperonin GroL identified by match to protein family HMM PF00118; match to protein family HMM TIGR02348 A0QSS4 No unknown Rv3417c Rv3417c NC_008596.1 Mycobrowser_v3 CDS 3409552 3410638 . + 0 MSMEG_3333 MSMEG_3333 fatty acid desaturase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 5036716 5038053 . - 0 MSMEG_4939 atpFH ATP synthase delta chain identified by match to protein family HMM PF00213; match to protein family HMM PF00430; match to protein family HMM TIGR01145 A0R203 No unknown Rv1307 Rv1307 NC_008596.1 Mycobrowser_v3 CDS 2438992 2440062 . + 0 MSMEG_2358 mnmA tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase identified by match to protein family HMM PF03054; match to protein family HMM TIGR00420 A0QUW3 No unknown Rv3024c Rv3024c NC_008596.1 Mycobrowser_v3 CDS 1187553 1187897 . + 0 MSMEG_1124 FdxA putative ferredoxin FdxA identified by match to protein family HMM PF00037 A0QRI0 No unknown Rv2007c Rv2007c NC_008596.1 Mycobrowser_v3 CDS 3526916 3529162 . + 0 MSMEG_3461 katG catalase/peroxidase HPI identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198 A0QXX7 No unknown NC_008596.1 Mycobrowser_v3 CDS 5851717 5852493 . - 0 MSMEG_5779 pstB phosphate ABC transporter, ATP-binding protein identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972 A0R4C0 No unknown Rv0820 Rv0820 NC_008596.1 Mycobrowser_v3 CDS 965533 967158 . + 0 MSMEG_0880 groL1 chaperonin GroL identified by match to protein family HMM PF00118; match to protein family HMM TIGR02348 A0QQU5 No unknown NC_008596.1 Mycobrowser_v3 CDS 1620683 1622059 . + 0 MSMEG_1534 eccB4 ESX conserved component eccB4. Probable membrane protein identified by match to protein family HMM PF05108 A0QSM7 No cell wall and cell processes Rv3450c Rv3450c NC_008596.1 Mycobrowser_v3 CDS 6438913 6441132 . + 0 MSMEG_6384 katG catalase/peroxidase HPI identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198 A0R609 No unknown Rv1908c Rv1908c NC_008596.1 Mycobrowser_v3 CDS 2471469 2472095 . + 0 MSMEG_2389 hup DNA-binding protein HU identified by match to protein family HMM PF00216 Q9ZHC5 No unknown Rv2986c Rv2986c NC_008596.1 Mycobrowser_v3 CDS 2500395 2501252 . + 0 MSMEG_2419 mutM formamidopyrimidine-DNA glycosylase identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831; match to protein family HMM TIGR00577 A0QV21 No unknown Rv2924c Rv2924c NC_008596.1 Mycobrowser_v3 tRNA 10072 10148 . + 0 MSMEG_0008 MSMEG_0008 tRNA-Ile No stable RNAs NC_008596.1 Mycobrowser_v3 CDS 695317 699294 . + 0 MSMEG_0617 eccC3 FtsK/SpoIIIE family protein. ESX conserved component eccC3. Possible membrane protein identified by match to protein family HMM PF01580 A0QQ40 No cell wall and cell processes Rv0284 Rv0284 NC_008596.1 Mycobrowser_v3 CDS 1624781 1628416 . + 0 MSMEG_1536 eccC4 ESX conserved component eccC4. Probable membrane protein identified by match to protein family HMM PF01580 A0QSN0 No cell wall and cell processes Rv3447c Rv3447c NC_008596.1 Mycobrowser_v3 CDS 89159 90691 . + 0 MSMEG_0068 eccD1 ESX conserved component eccD1. Probable transmembrane protein identified by match to protein family HMM PF04600; match to protein family HMM TIGR02958 A0QNJ8 No cell wall and cell processes Rv3877 Rv3877 NC_008596.1 Mycobrowser_v3 CDS 1623349 1624662 . - 0 MSMEG_1535 eccD4 ESX conserved component eccD4. Probable integral membrane protein A0QSM9 No cell wall and cell processes Rv3448 Rv3448 NC_008596.1 Mycobrowser_v3 CDS 104594 105988 . - 0 MSMEG_0082 eccE1 ESX conserved component eccE1. Possible membrane protein A0QNL0 No cell wall and cell processes Rv3882c Rv3882c NC_008596.1 Mycobrowser_v3 CDS 705548 706477 . + 0 MSMEG_0626 eccE3 ESX conserved component eccE3. Probable transmembrane protein A0QQ48 No cell wall and cell processes Rv0292 Rv0292 NC_008596.1 Mycobrowser_v3 CDS 58186 58648 . + 0 MSMEG_0038 MSMEG_0038 glucose-methanol-choline oxidoreductase; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error Yes unknown NC_008596.1 Mycobrowser_v3 CDS 95440 96300 . - 0 MSMEG_0072 MSMEG_0072 This gene is disrupted by an IS1549 element.; IS1549, transposase, interruption-C; identified by similarity to GB:AAC38260.1 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 105985 107334 . - 0 MSMEG_0083 mycP1 membrane-anchored mycosin mycp1 identified by match to protein family HMM PF00082 A0QNL1 No intermediary metabolism and respiration Rv3883c Rv3883c NC_008596.1 Mycobrowser_v3 CDS 704172 705551 . + 0 MSMEG_0624 mycP3 PROBABLE MEMBRANE-ANCHORED MYCOSIN MYCP3 (SERINE PROTEASE) (SUBTILISIN-LIKE PROTEASE) (SUBTILASE-LIKE) (MYCOSIN-3) identified by match to protein family HMM PF00082 A0QQ47 No intermediary metabolism and respiration Rv0291 Rv0291 NC_008596.1 Mycobrowser_v3 CDS 1622024 1623352 . - 0 MSMEG_1533 mycP4 PROBABLE MEMBRANE-ANCHORED MYCOSIN MYCP4 (SERINE PROTEASE) (SUBTILISIN-LIKE PROTEASE) (SUBTILASE-LIKE) (MYCOSIN-4) identified by match to protein family HMM PF00082 A0QSM8 No intermediary metabolism and respiration Rv3449 Rv3449 NC_008596.1 Mycobrowser_v3 CDS 76535 77383 . + 0 MSMEG_0057 espG1 ESX-1 secretion-associated protein espG1 A0QNI7 No cell wall and cell processes Rv3866 Rv3866 NC_008596.1 Mycobrowser_v3 CDS 701853 702734 . + 0 MSMEG_0622 espG3 ESX-1 secretion-associated protein espG3. Putative DNA-binding protein A0QQ45 No cell wall and cell processes Rv0289 Rv0289 NC_008596.1 Mycobrowser_v3 CDS 1902184 1903262 . + 0 MSMEG_1828 MSMEG_1828 nucleotidyl transferase; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00132; match to protein family HMM PF00483 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4595208 4598201 . - 0 MSMEG_4512 mbtD polyketide synthetase mbtD identified by match to protein family HMM PF00106; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370 A0R0U6 No lipid metabolism Rv2381c Rv2381c NC_008596.1 Mycobrowser_v3 CDS 2595148 2596268 . + 0 MSMEG_2510 MSMEG_2510 smf family protein; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF02481 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 6968482 6969375 . + 0 MSMEG_6927 mutT4 MutT/nudix family protein identified by match to protein family HMM PF00293 A0R7I3 No conserved hypotheticals Rv3908 Rv3908 NC_008596.1 Mycobrowser_v3 CDS 1579678 1581408 . + 0 MSMEG_1488 ilvB2 acetolactate synthase identified by match to protein family HMM PF02775; match to protein family HMM PF02776 A0QSI2 No intermediary metabolism and respiration Rv3470c Rv3470c NC_008596.1 Mycobrowser_v3 CDS 5569498 5570190 . - 0 MSMEG_5488 mprA DNA-binding response regulator identified by match to protein family HMM PF00072; match to protein family HMM PF00486 A0R3I8 No regulatory proteins Rv0981 Rv0981 NC_008596.1 Mycobrowser_v3 CDS 6000020 6001720 . + 0 MSMEG_5941 MSMEG_5941 3-ketosteroid dehydrogenase identified by match to protein family HMM PF00890; match to protein family HMM PF01266 A0R4S9 No unknown Rv3537 Rv3537 NC_008596.1 Mycobrowser_v3 CDS 12272 13301 . + 0 MSMEG_0013 MSMEG_0013 ferric enterobactin transporter permease FepG; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01032 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 2493061 2496444 . + 0 MSMEG_2412 pyc pyruvate carboxylase identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF00682; match to protein family HMM PF02436; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR01235 A0QV14 No unknown Rv2967c Rv2967c NC_008596.1 Mycobrowser_v3 CDS 3778220 3785944 . + 0 MSMEG_3715 MSMEG_3715 linear gramicidin synthetase subunit C identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733; match to protein family HMM TIGR01746 A0QYM8 No unknown NC_008596.1 Mycobrowser_v3 CDS 6699516 6702911 . + 0 MSMEG_6648 pyc pyruvate carboxylase identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF00682; match to protein family HMM PF02436; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR01235 A0R6R9 No unknown NC_008596.1 Mycobrowser_v3 CDS 1645169 1646021 . - 0 MSMEG_1555 MSMEG_1555 UNKNOWN conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to RF:NP_854757.1 Yes unknown NC_008596.1 Mycobrowser_v3 CDS 4527310 4528722 . + 0 MSMEG_4446 lpdA dihydrolipoamide dehydrogenase; this gene contains a premature stop which is not the result of sequencing error; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350 Yes unknown