Gene ML0198 in Mycobacterium leprae TN
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namecspA
Gene length204 bp
IdentifierML0198
Location 264898 bp
Protein summary information
Molecular mass7342.12 Da
Isoelectric point4.96
Protein length68 amino acids
Structural information
PFAMPF00313
Orthologues
M. tuberculosisRv3648c
Cross-references
UniProtO69550
Gene OntologyCytoplasm, Regulation of transcription, dna-dependent, Dna binding
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
ProductProbable cold shock protein A CspA
CommentsML0198, len: 67 aa. Probable cspA, cold shock protein A, identical to Rv3648c|CSPA_MYCTU|O06360 probable cspA, cold shock protein A from M. tuberculosis (67 aa), Fasta scores: E(): 3.9e-27, (97.0% identity in 67 aa overlap). Similar to many others e.g. CSP_ARTGO|P54584 csp, cold shock protein from Arthrobacter globiformis (67 aa), Fasta scores: E(): 8.8e-19, (71.6% identity in 67 aa overlap). Previously sequenced as O69550|AL023093 (67 aa), Fasta scores: E(): 1.2e-27, (100.0% identity in 67 aa overlap). Also similar to ML2147 from M. leprae. Contains Pfam match to entry PF00313 CSD, 'Cold-shock' DNA-binding domain. Contains PS00352 'Cold-shock' DNA-binding domain signature.
Functional categoryVirulence, detoxification, adaptation
Coordinates
TypeStartEndOrientation
CDS264898265101+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium leprae TN|ML0198|cspA
MPQGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGSGFRTLEENQKVEFEIGHSPKGPQATGVRSV
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