Gene ML1396 in Mycobacterium leprae TN
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namerplT
Gene length390 bp
IdentifierML1396
Location 1676667 bp
Protein summary information
Molecular mass14503.6 Da
Isoelectric point11.42
Protein length130 amino acids
Structural information
PFAMPF00453
Orthologs
M. tuberculosis H37RvRv1643
M. lepromatosis Mx1-22AMLPM_1396
Cross-references
UniProtQ9CC20
Gene OntologyRibosomal large subunit assembly, Ribosome, Structural constituent of ribosome, Translation, Rrna binding
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
ProductProbable 50S ribosomal protein L20 RplT
CommentsML1396, len: 129 aa. Probable rplT, 50S ribosomal protein L20. Highly similar to many 50s ribosomal L20 proteins, including: Escherichia coli SW:RL20_ECOLI (P02421) (117 aa), Fasta scores: E(): 1.9e-23, 57.8% identity in 116 aa overlap and Mycobacterium tuberculosis Rv1643 SW:RL20_MYCTU (P94977) (129 aa), Fasta scores: E(): 0, 90.7% identity in 129 aa overlap. Contains Pfam match to entry PF00453 Ribosomal_L20, Ribosomal protein L20. Contains PS00937 Ribosomal protein L20 signature.
Functional categoryInformation pathways
Mutant
Check for mutants available at TARGET website
Coordinates
TypeStartEndOrientation
CDS16766671677056+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium leprae TN|ML1396|rplT
MARVKRAVNAHKKRRTVLKASKGYRGQRSRLYRKAKEQQLHSLGYAYRDRRARKGEFRKLWISRINAAARANDITYNRLIQGLKAADVDVDRKNLADIAISDPAAFTALVEVARSGLPEDVNVPSGEAA
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