Gene ML1562c
in Mycobacterium leprae TN
General annotation
| Type | CDS |
| Function | Unknown |
| Product | POSSIBLE INTEGRAL MEMBRANE EFFLUX PROTEIN EFPA |
| Comments | ML1562c, len: 534 aa. Possible efpA, integral membrane efflux protein. Highly similar to several transmembrane transport proteins including: Streptomyces lipmanii SW:PUR8_STRLP (P42670) (503 aa), Fasta scores: E(): 0, 33.3% identity in 481 aa overlap and Mycobacterium tuberculosis Rv2846c TR:O05813 (EMBL:Z95207) (530 aa), Fasta scores: E(): 0, 86.5% identity in 535 aa overlap. Contains multiple possible membrane spanning hydrophobic domains. Contains Pfam match to entry PF00083 sugar_tr, Sugar (and other) transporter. |
| Functional category | Cell wall and cell processes |
| Mutant | Check for mutants available at TARGET website |
Coordinates
| Type | Start | End | Orientation |
|---|---|---|---|
| CDS | 1886300 | 1887904 | - |
Genomic sequence
Feature type
Upstream flanking region (bp)
Downstream flanking region (bp)
Update
Protein sequence
>Mycobacterium leprae TN|ML1562c|efpA
MVTLYDHERAVHNWTAARSDRPAPSRLTQQVEPASERTSKYPTLLPSGRFPSGRFIAAVIVIGGMQLLATMDSTVAIVALPKIQNELSLSDAGRSWGITAYVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEVTLVIARLLQGIGSAIASPTGLALVATTFSKGSARNTATAVFAAMTAIGSVMGLVVGGALTEVSWRLAFLVNVPIGLVMIYLARTALHETHKERMKLDAAGAILATLACTAAVFAFSMGPEKGWISLTTIGSGLVALVAAIAFAVVERTAENPVVPFDLFRDRNRLVTFIAIFLAGGVIFSLTVSIGLYIQDILGYSALRAGIGFIPFVIAMGIGLGVSSQLVSRFSPRVLTIGGGWLLMVAMLYGWAFMNRGVPYFPNLLAPIVVGGIGIGMAVVPLTLSAIAGVGFDRIGPVSAIALMLQSLGGPLVLAVIQAVITSRTLYLGGTTGPVKFMNDAQLRALDHGYTYGLLWVAGAVVIVGVAALFIGYTPEQVAYAQEVKEAVDAGEL
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