Gene ML1958c in Mycobacterium leprae TN
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namerpsD
Gene length606 bp
IdentifierML1958c
Location 2345841 bp
Protein summary information
Molecular mass23567.0 Da
Isoelectric point10.27
Protein length202 amino acids
Structural information
PFAMPF00163, PF01479
Orthologs
M. tuberculosis H37RvRv3458c
M. lepromatosis Mx1-22AMLPM_1958
Cross-references
UniProtQ9X799
Gene OntologySmall ribosomal subunit, Structural constituent of ribosome, Translation, Rrna binding
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
ProductPROBABLE 30S RIBOSOMAL PROTEIN S4 RPSD
CommentsML1958c, len: 201 aa. Probable rpsD, 30S ribosomal protein S4. Similar to M. tuberculosis 30S ribosomal protein S4 rpsD Rv3458c SW:RS4_MYCTU (O06325) (201 aa), Fasta scores: E(): 0, 93.5% identity in 201 aa overlap. Contains Pfam match to entry PF00163 Ribosomal_S4, Ribosomal protein S4/S9 N-terminal domain. Contains Pfam match to entry PF01479 S4, S4 domain. Contains PS00632 Ribosomal protein S4 signature. Contains PS00017 ATP/GTP-binding site motif A (P-loop).
Functional categoryInformation pathways
Mutant
Check for mutants available at TARGET website
Coordinates
TypeStartEndOrientation
CDS23458412346446-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium leprae TN|ML1958c|rpsD
MARYTGPITRKSRRLRIDLVGGDQAFEKRPYPPGQHGRARIKESEYLLQLQEKQKARFTYGVMEKQFRRYYEEAVRQPGKTGEELLKILESRLDNVIYRAGLARTRRMARQLVSHGHFSVNGVHVNVPSYRVSQYDIIDIRDKSLDTVPFQIARETVGDRPIPSWLQVVGEHQRILIHQLPERVQIEVPLIEQLIVEYYSK
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