Gene MMAR_1925 in Mycobacterium marinum M
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namegpsI
Gene length2289 bp
IdentifierMMAR_1925
Location 2339617 bp
Protein summary information
Molecular mass80633.4 Da
Isoelectric point4.72
Protein length763 amino acids
Structural information
PFAMB2HKV3
Orthologs
M. tuberculosis H37RvRv2783c
Cross-references
UniProtB2HKV3
Gene Ontology3'-5'-exoribonuclease activity, Rna binding, Rna processing, Cytoplasm, Mrna catabolic process, Polyribonucleotide nucleotidyltransferase activity
Enzyme Classification2.7.7.8
Precomputed results
BLASTReport
General annotation
TypeCDS
Functioninvolved in mRNA degradation. hydrolyses single-stranded polyribonucleotides processively in the 3' to 5' direction. involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [catalytic activity: RNA(n+1) + phosphate = RNA(N) + a nucleoside diphosphate].
Productbifunctional protein polyribonucleotide nucleotidyltransferase GpsI
Comments-
Functional categoryInformation pathways
Coordinates
TypeStartEndOrientation
CDS23396172341905+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium marinum M|MMAR_1925|gpsI
MSVAETEEGVFEATATIDNGSFGTRTIRFETGRLAQQAAGSVVAYLDDENMLLSATTASKNPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVNGLRNEIQVVVTILSLDPNDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIDGQWVAFPNVEQLERAVFDMVVAGRIVGTEEDGTPDVAIMMVEAEATDKVIELVEGGAPAPTESVVAQGLEAAKPFIAALCTAQQELADASGATAKTGAEYPVFPEYGDDVYYAVSSVATDGLAAALTIGGKAERNQRTEEIKAEVLERLADTYEGREKEIGAAFRSLTKKLVRQRIVTDHFRIDGRGITDIRALSAEVALVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNFPPFSTGETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVPLKAPVAGIAMGLVSDDVEVDGKTERRFVTLTDILGAEDAFGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDTPDEMSPYAPRVTTIKVPVDKIGEVIGPKGKVINSITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGKISLVLVAEDDDSAAAAAADSPAPADAATASS
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