Gene MMAR_4042 in Mycobacterium marinum M
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namerphA
Gene length831 bp
IdentifierMMAR_4042
Location 4983081 bp
Protein summary information
Molecular mass28831.8 Da
Isoelectric point5.42
Protein length277 amino acids
Structural information
PFAMB2HQF7
Orthologues
M. tuberculosisRv1340
Cross-references
UniProtB2HQF7
Gene Ontology3'-5'-exoribonuclease activity, Nucleotidyltransferase activity, Trna binding, Trna processing, Trna-specific ribonuclease activity
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionRNase ph is a phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates [catalytic activity: {tRNA}(n+1) + phosphate = {tRNA}(N) + a nucleoside diphosphate].
Productribonuclease RphA
Comments-
Functional categoryInformation pathways
Coordinates
TypeStartEndOrientation
CDS49830814983911-
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium marinum M|MMAR_4042|rphA
VSGALGLVSVGRARVGVVSKREDGRRDDELRPVVITRGFTENPAGSVLIEFGRTKVMCTASVTEGVPRWRKGSGLGWLTAEYAMLPSATHTRSDRESVKGRVGGRTQEISRLVGRSLRACIDLAALGENTIAVDCDVLQADGGTRTAAITGAYVALADAVNYLAAAGKLSDPRPLSCAIAAVSVGVVDGRVRVDLPYEEDSRAEVDMNVVATDTGTLVEVQGTGEGATFPRSTLDKLLDMALGACDTLFAAQRDALALPYPGVLPEGPPPSKAFGS
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