Gene MSMEG_3175 in Mycobacterium smegmatis MC2-155
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene nameMSMEG_3175
Gene length930 bp
IdentifierMSMEG_3175
Location 3250303 bp
Protein summary information
Molecular mass33417.9 Da
Isoelectric point7.004
Protein length309 amino acids
Orthologs
M. tuberculosis H37RvRv1540
Cross-references
UniProtA0QX52
Gene OntologyPseudouridine synthase activity, Pseudouridine synthesis, Rna binding
Enzyme Classification5.4.99.-
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionUnknown
Productribosomal large subunit pseudouridine synthase D
Commentsidentified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005
Functional categoryUnknown
Coordinates
TypeStartEndOrientation
CDS32503033251232+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium smegmatis MC2-155|MSMEG_3175|MSMEG_3175
MDTRSMPVPEGLAGMRVDAGLSRLLGLSRTVVATLAEEGAVELDGAPAAKSDKLVAGAWLEVRLPEAPKPVENTPVDIEGMNILYSDADIVAVDKPPGVAAHATVGWHGPTVLGGLAAAGFRISTSGIHERQGIVHRLDVGTSGVMVVALSERAYTVLKRAFKQRTVEKRYHALVQGHPDPSSGTIDAPIGRHRGHDWKFAVVEGGRHSVTHYDTLEMFQAASLLDIELETGRTHQIRVHFSALHHPCCGDLTYGADPTLAKRLGLERQWLHARSLAFAHPADGRRVEITSPYPDDLQNALDLLRRHAL
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