Gene MMAR_1090 in Mycobacterium marinum M
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namerpoA
Gene length1044 bp
IdentifierMMAR_1090
Location 1309999 bp
Protein summary information
Molecular mass37741.5 Da
Isoelectric point4.64
Protein length348 amino acids
Structural information
PFAMB2HCX4
Orthologs
M. tuberculosis H37RvRv3457c
Cross-references
UniProtB2HCX4
Gene OntologyDna binding, Dna-directed rna polymerase activity, Protein dimerization activity, Transcription, dna-dependent
Precomputed results
BLASTReport
General annotation
TypeCDS
FunctionDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. the amino-terminal portion is involved in the assembly of core RNAP, whereas the C-terminal is involved in interaction with transcriptional regulators [catalytic activity: N nucleoside triphosphate = N pyrophosphate + RNA(N)].
ProductDNA-directed RNA polymerase (alpha chain), RpoA
Comments-
Functional categoryInformation pathways
Coordinates
TypeStartEndOrientation
CDS13099991311042+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium marinum M|MMAR_1090|rpoA
MLISQRPTLSEEVLTDSRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVLHEFTTVPGVKEDVTDIILNLKALVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHNPNMRIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDATRVEQRTDFDKLILDVETKNSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAEADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVKLHQLGLSLKDSPPSFDPSEVAGYDVATGTWSTEGAYDDQDYAETEQL
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