Gene MMAR_1960 in Mycobacterium marinum M
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virulence, detoxification, adaptation
information pathways
cell wall and cell processes
stable RNAs
insertion seqs and phages
PE/PPE
intermediary metabolism and respiration
unknown
regulatory proteins
conserved hypotheticals
lipid metabolism
pseudogenes
Gene summary information
Gene namehsdS
Gene length1086 bp
IdentifierMMAR_1960
Location 2379181 bp
Protein summary information
Molecular mass38542.1 Da
Isoelectric point8.76
Protein length362 amino acids
Structural information
PFAMB2HKY9
Orthologs
M. tuberculosis H37RvRv2761c
Cross-references
UniProtB2HKY9
Gene OntologyDna binding, Dna modification
Precomputed results
BLASTReport
General annotation
TypeCDS
Functionimplicated in restriction/modification of DNA. component of type I restriction/modification system. it is thought that the M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of bipartite DNA recognition sequence.
Producttype I restriction/modification system specificity determinant HsdS (S protein)
Comments-
Functional categoryInformation pathways
Coordinates
TypeStartEndOrientation
CDS23791812380266+
Genomic sequence
Feature type Upstream flanking region (bp) Downstream flanking region (bp) Update
Protein sequence
>Mycobacterium marinum M|MMAR_1960|hsdS
VRLGEHLEFRSGSCSPPRRARGRVPVYGANGPIGFAAEHNVSGPLIVVGRVGSYCGSVRYCDSDVWVTDNAYVCRANDPAETRYWYYALQTCRLNEHRAGSGQPLLNQRTLREVSVHVAQAPERRRIAEVLGALDDKIANNERVIEAAEALMVAMVGSVDARVALSGLARRSTKLVNPADFDDVVAHFSLPAFDAGAHARPVAGASVKSGKFHLSEPCVLFAKLNPRVPRIWNVVRLPPQMALASCEFVVLSPLGVDTSVLWSALRQPEVSTSLAQLVAGTSGSHQRIGPKDLLDLQVPDVRRLGAAQSATITDLGALCHARRGQCAQLAALRDALLPGLVTGEVAVSGGELLLASPLGTP
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